Citrus Sinensis ID: 013016

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
MLIDSDFEPPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQSTAFDYF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccEEEEcccccEEEEEEEEcccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccEEEEEcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHcccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccHHccEEEEccccccEEEEEEEEccccccccccccccEEEEEHccHHHHHHHcHHHHHHHHHHHHHHccccccEEEEEEEccccEEEEEEEcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEcccccccccccccccEEccccccccccccccccccccccccccccccccHHHHHcccccccEEcEEccccEccccccHHHccHHHHccccEccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHcccccccHHHHHcccccccccHHHHHHcccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mlidsdfeppsdattrttstansssmssescssfsrlsfelptsksspenlslkphrssdfaySAIRSatfgrktgltfrdfdlhrrigagdiGTVYLCSLnnkyrqdrghepccLYAMKVVNKEVLEKKKKVHRAEMEKKILKmldhpflptlyaefeasnfsCIVMefcsggdlhslrhkqphkrfslTSARFYAAEVLVALEYLHMLGIIyrdlkpenvlvrsdghimlsdfdlslcsnaipavespasspeaasprsqtytRQYSTRLSRFLNrffgskkiqtltpnrlfvaepvaarscsfvgtheyvspevasggshgnavdWWAFGIFIYEMiygrtpfaapsnettlrnivkkpltfptqspssmseYHARDLISgllnkdpcnrlgskrgaadvkthpffkgLNFALirsltppeipgmrrqktmpfpdqkiksqstafdyf
Flexible Loop (DISEMBL)
mlidsdfeppsdattrttstansssmssesCSSFSRLSFELPtsksspenlslkphrssDFAYSAirsatfgrktgltfrdfDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVEspasspeaasprsqtytRQYSTRLSRFLNRFfgskkiqtltpnrLFVAEPVAARSCSFVGTHEYVSPevasggshgNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLtfptqspssmSEYHARDLISGLLNKDPCNRLGSKrgaadvkthpffkglnfalirsltppeipgmrrqktmpfpdqkiksqstafdyf
Low Complexity Region (SEG)
MLIDSDFEPPsdattrttstansssmssescssfsrlsFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMkvvnkevlekkkkvHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIpavespasspeaaspRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQSTAFDYF
Disordered region (IsUnstruct)
************************************************************FAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI***********************YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS**TTLRNIV*********************LISGLLNKDPCNRL****GAADVKTHPFFKGLNFALIRSL*******************************
Disordered Region (DISOPRED)
*********************************************************************************FDLHRRIGAGDIGTVYLCSLNNK******HE*CCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI*******************************************************AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQ****DYF
Disordered Region (DISEMBL)
****************************************************LKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA*******************RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP*********YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPD*************
Disordered Region (DISPRO)
*********************************************************SSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS*****************TRLSRFLNRFFG*****TLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIDSDFEPPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAxxxxxxxxxxxxxxxxxxxxxKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQSTAFDYF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	451	2.2.26 [Sep-21-2011]
O64682	438	Protein kinase PINOID OS=	yes	no	0.953	0.981	0.698	1e-174
Q2QM77	484	Protein kinase PINOID OS=	yes	no	0.851	0.793	0.581	1e-130
Q64FQ2	525	Protein kinase PINOID 2 O	no	no	0.895	0.769	0.465	1e-105
A2YBX5	589	Protein kinase G11A OS=Or	N/A	no	0.838	0.641	0.472	1e-103
Q0DCT8	589	Protein kinase G11A OS=Or	no	no	0.838	0.641	0.469	1e-102
P15792	609	Protein kinase PVPK-1 OS=	N/A	no	0.791	0.586	0.496	1e-102
Q9LFA2	934	Serine/threonine-protein	no	no	0.818	0.395	0.491	1e-101
Q05999	578	Serine/threonine-protein	no	no	0.809	0.631	0.488	1e-96
Q94E49	493	Protein kinase PINOID 2 O	no	no	0.809	0.740	0.472	1e-96
Q9ST27	907	Phototropin-2 OS=Oryza sa	no	no	0.762	0.379	0.445	3e-87

>sp|O64682|PID_ARATH Protein kinase PINOID OS=Arabidopsis thaliana GN=PID PE=1 SV=1

 Score =  612 bits (1577), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 311/445 (69%), Positives = 351/445 (78%), Gaps = 15/445 (3%)

Query: 11  SDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPEN--LSLKPHRSSDFAYSAIRS 68
           SD      +T +  S  +ESCSSFSRLSF+ P S    E   LSLKPHRSSDFAY+ IR 
Sbjct: 5   SDGEMSLGTTNSPISSGTESCSSFSRLSFDAPPSTIPEEESFLSLKPHRSSDFAYAEIRR 64

Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE 128
               +K GLTFRDF L RRIGAGDIGTVYLC L     + R       +AMKVV+KE L 
Sbjct: 65  R---KKQGLTFRDFRLMRRIGAGDIGTVYLCRLAGDEEESR----SSYFAMKVVDKEALA 117

Query: 129 KKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
            KKK+HRAEMEK ILKMLDHPFLPTLYAEFEAS+FSCIVME+CSGGDLHSLRH+QPH+RF
Sbjct: 118 LKKKMHRAEMEKTILKMLDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHRQPHRRF 177

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           SL+SARFYAAEVLVALEYLHMLGIIYRDLKPEN+LVRSDGHIMLSDFDLSLCS++I AVE
Sbjct: 178 SLSSARFYAAEVLVALEYLHMLGIIYRDLKPENILVRSDGHIMLSDFDLSLCSDSIAAVE 237

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
           S +SSPE    RS    R++ TRL+R   R   SKK+QTL P RLFVAEPV ARS SFVG
Sbjct: 238 SSSSSPENQQLRS---PRRF-TRLARLFQRVLRSKKVQTLEPTRLFVAEPVTARSGSFVG 293

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ 368
           THEYV+PEVASGGSHGNAVDWWAFG+F+YEMIYG+TPF AP+N+  LRNIVK+ L+FPT 
Sbjct: 294 THEYVAPEVASGGSHGNAVDWWAFGVFLYEMIYGKTPFVAPTNDVILRNIVKRQLSFPTD 353

Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGM 428
           SP++M E HAR+LISGLLNKDP  RLGS+RGAA+VK HPFFKGLNFALIR+LTPPEIP  
Sbjct: 354 SPATMFELHARNLISGLLNKDPTKRLGSRRGAAEVKVHPFFKGLNFALIRTLTPPEIPSS 413

Query: 429 RRQKTMPFPDQKIKSQS--TAFDYF 451
             +K M       +S +   AFDYF
Sbjct: 414 VVKKPMKSATFSGRSSNKPAAFDYF 438

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Acts as a positive regulator of cellular auxin efflux and regulates organ development by enhancing polar auxin transport. Phosphorylates conserved serine residues in the PIN auxin efflux carriers. Phosphorylation of PIN proteins is required and sufficient for apical-basal PIN polarity that enables directional intercellular auxin fluxes, which mediate differential growth, tissue patterning and organogenesis. Acts in association with PIN1 to control the establishment of bilateral symmetry and promotion of cotyledon outgrowth. Regulates root gravitropism through modulation of PIN2-dependent basipetal auxin transport. Required for polarization of PIN3-dependent auxin transport for hypocotyl gravitropic response. The protein kinase activity of PID is essential for its auxin efflux regulatory function. PID kinase and PP2A phosphatase activities antagonistically regulate phosphorylation of PIN proteins, affecting PIN sorting.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q2QM77|PID_ORYSJ Protein kinase PINOID OS=Oryza sativa subsp. japonica GN=PID PE=2 SV=1

 Score =  463 bits (1192), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/409 (58%), Positives = 294/409 (71%), Gaps = 25/409 (6%)

Query: 31  CSSFSRLSFEL---------PTSKSSPE-NLSLKPHRSSDFAYSAIRSATFGRKTGLTFR 80
           CSS SRLSF+           TS S P  ++ L+PHRS D A++AIR+A+      L  R
Sbjct: 50  CSSLSRLSFDCSPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTSAAPLGPR 109

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF L RRIG GDIGTVYLC L    R     E  C+YAMKVV++  + +K+K+ RA  EK
Sbjct: 110 DFKLVRRIGGGDIGTVYLCRL----RSSPERESPCMYAMKVVDRRAVARKQKLGRAAAEK 165

Query: 141 KILKMLDHPFLPTLYAEFEAS-NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           +IL+ LDHPFLPTL+A+F+A+ +FSC VMEFC GGDLHSLRH+ P +RF L SARFYAAE
Sbjct: 166 RILRQLDHPFLPTLFADFDATPHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPSARFYAAE 225

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           VL+A+EYLHM+GI+YRDLKPENVL+R+DGHIML+DFDLSL S   P+++    + + AS 
Sbjct: 226 VLLAIEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLQSTTSPSLDGDTDTDDEASG 285

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
            +  +       L RF  R     +     P   FVAEPV ARSCSFVGTHEYV+PEVAS
Sbjct: 286 GASCFPDH----LLRFKRR-----RNAVAAPRPRFVAEPVDARSCSFVGTHEYVAPEVAS 336

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS-SMSEYHA 378
           GG+HG AVDWWA+G+F+YE+IYGRTPFA  +NE TLRNIV++PL FP+ S S   ++  A
Sbjct: 337 GGAHGAAVDWWAYGVFLYELIYGRTPFAGATNEATLRNIVRRPLAFPSGSGSCGPADADA 396

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG 427
           RDLI+ LL KDP  RLGS+RGAADVK+HPFFK LN AL+RS  PP +PG
Sbjct: 397 RDLIARLLAKDPAARLGSRRGAADVKSHPFFKSLNLALLRSSRPPVVPG 445

Serine/threonine-protein kinase involved in the regulation of auxin signaling. May control polar auxin transport and probably plays a role in the pattern formation and organogenesis in the rice shoot.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q64FQ2|PID2_ARATH Protein kinase PINOID 2 OS=Arabidopsis thaliana GN=PID2 PE=1 SV=1

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/490 (46%), Positives = 294/490 (60%), Gaps = 86/490 (17%)

Query: 4   DSDFEPPSDA--TTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDF 61
           +SD+E  +    ++R TS  +SS  +S SCSS S LS     S +       KPH+++  
Sbjct: 12  ESDYESSTVGPDSSRRTSWLSSSFTASPSCSSISHLSNHGLNSYNQS-----KPHKANQV 66

Query: 62  AYSAIRSA--TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAM 119
           A+ A+       GR  GL    F L +R+G+GDIG+VYLC       Q RG      YAM
Sbjct: 67  AWEAMARLRRCCGRAVGL--EHFRLLKRLGSGDIGSVYLC-------QIRGSPETAFYAM 117

Query: 120 KVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL 179
           KVV+KE +  KKK+ RAEMEKKIL MLDHPF PTLYA FEAS++S +VME+C GGDL+++
Sbjct: 118 KVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTLYAAFEASHYSFLVMEYCPGGDLYAV 177

Query: 180 RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
           R +QP KRF+++S RFYAAE LVALEYLHM+GI+YRDLKPENVL+R DGH+MLSDFDLS 
Sbjct: 178 RLRQPSKRFTISSTRFYAAETLVALEYLHMMGIVYRDLKPENVLIREDGHVMLSDFDLSF 237

Query: 240 ------------------------------CS---------NAIPAVESPASSPE----- 255
                                         CS         N + +  SP SS       
Sbjct: 238 KCDVVPQFLSDNDRDRGHQEDDDDISIRRKCSTPSCTTTPLNPVISCFSPTSSRRRKKNV 297

Query: 256 ------------AASPRSQTYTRQYS---TRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA 300
                       + S +S   +R +S   +  SR  N   G + I    P+    AEP+ 
Sbjct: 298 VTTTIHENAAGTSDSVKSNDVSRTFSRSPSSCSRVSN---GLRDISGGCPS--IFAEPIN 352

Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           ARS SFVGTHEY++PEV SG  HG+AVDWW +GIF+YEMI+GRTPF   +NE TL NI+K
Sbjct: 353 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTYGIFLYEMIFGRTPFKGDNNEKTLVNILK 412

Query: 361 KPLTFPTQSPSSMSEY----HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL 416
            PLTFP    +S  EY    +A+DLI  LL K+P  RLGS +G+ ++K H FF+G+N+AL
Sbjct: 413 APLTFPKVIVNSPKEYEDMVNAQDLIIKLLVKNPKKRLGSLKGSIEIKRHEFFEGVNWAL 472

Query: 417 IRSLTPPEIP 426
           IRS+ PP +P
Sbjct: 473 IRSIKPPWVP 482

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Plays a minor role in the regulation of cellular auxin efflux and cotyledon organogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1

 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/430 (47%), Positives = 262/430 (60%), Gaps = 52/430 (12%)

Query: 21  ANSSSMSSES-CSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTF 79
           + SS +S ES CSS S ++               KPH+++D  + AI+     R   L  
Sbjct: 149 STSSDVSDESACSSISSVT---------------KPHKANDSRWEAIQ-MIRTRDGILGL 192

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
             F L +++G GDIG+VYL  LN              +AMKV++K  L  +KK+ RA+ E
Sbjct: 193 SHFKLLKKLGCGDIGSVYLSELNGTKS---------YFAMKVMDKASLASRKKLLRAQTE 243

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           K+IL+ LDHPFLPTLY  FE   FSC+VMEFC GGDLH+LR +Q  K F   + +FY AE
Sbjct: 244 KEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKFYVAE 303

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL-CSNAIPAVESPASSPEAAS 258
           +L+A+EYLHMLGIIYRDLKPENVLVR DGHIMLSDFDLSL C+ +   + S     EA  
Sbjct: 304 ILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRSSNPDAEALR 363

Query: 259 PRSQTYTRQ-------------YSTRLSRFLNRFFGSKK---------IQTLTPNRLFVA 296
             +Q Y  Q              +T  + F  RFF   K         +  ++P    +A
Sbjct: 364 KNNQAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVVNQVSPWPELIA 423

Query: 297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
           EP  ARS SFVGTHEY++PE+  G  HG+AVDWW FGIF+YE+++G+TPF    N  TL 
Sbjct: 424 EPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 483

Query: 357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL 416
           N++ +PL FP     S S   ARDLI GLL K+P  RLG KRGA ++K HPFF+G+N+AL
Sbjct: 484 NVIGQPLRFPEYPVVSFS---ARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWAL 540

Query: 417 IRSLTPPEIP 426
           IR  +PPE+P
Sbjct: 541 IRCASPPEVP 550

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/430 (46%), Positives = 262/430 (60%), Gaps = 52/430 (12%)

Query: 21  ANSSSMSSES-CSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTF 79
           + SS +S ES CSS S ++               KPH+++D  + AI+     R   L  
Sbjct: 149 STSSDVSDESACSSISSVT---------------KPHKANDSRWEAIQ-MIRTRDGILGL 192

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
             F L +++G GDIG+VYL  L+              +AMKV++K  L  +KK+ RA+ E
Sbjct: 193 SHFKLLKKLGCGDIGSVYLSELSGTKS---------YFAMKVMDKASLASRKKLLRAQTE 243

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           K+IL+ LDHPFLPTLY  FE   FSC+VMEFC GGDLH+LR +Q  K F   + +FY AE
Sbjct: 244 KEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKFYVAE 303

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL-CSNAIPAVESPASSPEAAS 258
           +L+A+EYLHMLGIIYRDLKPENVLVR DGHIMLSDFDLSL C+ +   + S     EA  
Sbjct: 304 ILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRSSNPDAEALR 363

Query: 259 PRSQTYTRQ-------------YSTRLSRFLNRFFGSKK---------IQTLTPNRLFVA 296
             +Q Y  Q              +T  + F  RFF   K         +  ++P    +A
Sbjct: 364 KNNQAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVVNQVSPWPELIA 423

Query: 297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
           EP  ARS SFVGTHEY++PE+  G  HG+AVDWW FGIF+YE+++G+TPF    N  TL 
Sbjct: 424 EPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 483

Query: 357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL 416
           N++ +PL FP     S S   ARDLI GLL K+P  RLG KRGA ++K HPFF+G+N+AL
Sbjct: 484 NVIGQPLRFPEYPVVSFS---ARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWAL 540

Query: 417 IRSLTPPEIP 426
           IR  +PPE+P
Sbjct: 541 IRCASPPEVP 550

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 251/397 (63%), Gaps = 40/397 (10%)

Query: 54  KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
           KPH+++D  + AI+ A   R   L  R F L +++G GDIG+VYL  L+           
Sbjct: 202 KPHKANDIRWEAIQ-AVRTRDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTS------ 254

Query: 114 CCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
              +AMKV+NK  L  +KK+ RA+ E++IL+ LDHPFLPTLY  FE   FSC+VMEFC G
Sbjct: 255 ---FAMKVMNKTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETEIFSCLVMEFCPG 311

Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
           GDLH+LR +QP K FS  + RFY AEVL++LEYLHMLGIIYRDLKPENVLVR DGHIMLS
Sbjct: 312 GDLHALRQRQPGKYFSEHAVRFYVAEVLLSLEYLHMLGIIYRDLKPENVLVREDGHIMLS 371

Query: 234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYS------------TRLSRFLNRFFG 281
           DFDLSL  +  P +     S      +S  Y  Q S             + S F  RF  
Sbjct: 372 DFDLSLRCSVSPTL---VKSSNNLQTKSSGYCVQPSCIEPTCVMQPDCIKPSCFTPRFLS 428

Query: 282 SKKI------------QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDW 329
            K                +TP    +AEP  ARS SFVGTHEY++PE+  G  HG+AVDW
Sbjct: 429 GKSKKDKKSKPKNDMHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDW 488

Query: 330 WAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD 389
           W FGIF+YE+++GRTPF   +N  TL N++ +PL FP +SP+    + ARDLI GLL K+
Sbjct: 489 WTFGIFLYELLFGRTPFKGSANRATLFNVIGQPLRFP-ESPT--VSFAARDLIRGLLVKE 545

Query: 390 PCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           P +RL  +RGA ++K HPFF+ +N+ALIR  TPPE+P
Sbjct: 546 PQHRLAYRRGATEIKQHPFFQNVNWALIRCATPPEVP 582

Phaseolus vulgaris (taxid: 3885)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1

 Score =  370 bits (951), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/417 (49%), Positives = 262/417 (62%), Gaps = 48/417 (11%)

Query: 43  TSKSSPENLSL-----KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVY 97
           TS S   NLS      KPH S D  + AI+     +   L  R F+L +++G GDIGTVY
Sbjct: 495 TSISEESNLSRFSCGNKPHMSMDVRWEAIKHIKV-QYGSLGLRHFNLLKKLGCGDIGTVY 553

Query: 98  LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE 157
           L  L             CL+A+KV++ E L ++KK  RA+ E++ILKMLDHPFLPTLYA+
Sbjct: 554 LAELIGTN---------CLFAIKVMDNEFLARRKKSPRAQAEREILKMLDHPFLPTLYAQ 604

Query: 158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDL 217
           F + N SC+VME+C GGDLH LR KQ  + F   +ARFY AE+L+ALEYLHMLGIIYRDL
Sbjct: 605 FTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFPEPAARFYVAEILLALEYLHMLGIIYRDL 664

Query: 218 KPENVLVRSDGHIMLSDFDLSL-C--------SNAIPAVESPA--SSPEAASPRSQTY-T 265
           KPEN+LVR DGHIML+DFDLSL C        SN+ P  + PA  S P   S   Q +  
Sbjct: 665 KPENILVREDGHIMLTDFDLSLRCAVNPTLVRSNSPPG-KDPARISGPYNTSNCIQPFCI 723

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNR----------------LFVAEPVAARSCSFVGT 309
            + S ++S F  R   S + Q   P R                  VAEP  ARS SFVGT
Sbjct: 724 TEPSCQVSCFSPRL-SSNQQQGRKPKRGDHLSKTQQHLSRSLPQLVAEPTEARSNSFVGT 782

Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
           HEY++PE+  G  HG AVDWW FG+ +YE++YG+TPF   +N+ TL N+V + L FP   
Sbjct: 783 HEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPD-- 840

Query: 370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            S +  + A+DLI GLL K+P NRLGS++G+ ++K HPFF+GLN+ALIR   PPE+P
Sbjct: 841 -SPLVSFQAKDLIRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELP 896

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05999|KPK7_ARATH Serine/threonine-protein kinase AtPK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1

 Score =  353 bits (907), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 249/397 (62%), Gaps = 32/397 (8%)

Query: 50  NLSLKPHR-SSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQD 108
           N + KPHR ++D  + AI+       + L  +DF L +++G GDIG VYL  L       
Sbjct: 149 NAAYKPHRDNNDKRWVAIQEVRSRVGSSLEAKDFKLIKKLGGGDIGNVYLAELIGT---- 204

Query: 109 RGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVM 168
                   +A+KV+ K  +  +KK+ RA+ EK+IL+ LDHPFLPTLY+ FE    SC+VM
Sbjct: 205 -----GVSFAVKVMEKAAIAARKKLVRAQTEKEILQSLDHPFLPTLYSHFETEMNSCLVM 259

Query: 169 EFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
           EFC GGDLHSLR KQ  K F   +ARFY AEVL+A+EYLHMLGIIYRDLKPENVLVR DG
Sbjct: 260 EFCPGGDLHSLRQKQRGKYFPEQAARFYVAEVLLAMEYLHMLGIIYRDLKPENVLVREDG 319

Query: 229 HIMLSDFDLSLCSNAIP--------AVESPASS-------PEAASPRSQTYTRQYSTRLS 273
           HIMLSDFDLSL     P         +ES +SS        + +S   Q    Q      
Sbjct: 320 HIMLSDFDLSLRCAVSPTLVRFAAITLESKSSSYCIQPTCVDQSSCIVQPDCIQPVCFTP 379

Query: 274 RFLNRFFGSKKIQTLT----PNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDW 329
           RFL++    KK   ++    P    +AEP +ARS SFVGTHEY++PE+  G  HG+AVDW
Sbjct: 380 RFLSKGKHRKKSNDMSRQIRPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDW 439

Query: 330 WAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD 389
           W FGIF+YE+++G TPF    N  TL N+V +PL FP     S   + ARDLI GLL K+
Sbjct: 440 WTFGIFLYELLFGITPFRGGDNRATLFNVVGQPLRFPEHPNVS---FAARDLIRGLLVKE 496

Query: 390 PCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           P +RL  +RGA ++K HPFF+ +N+ALIR  +PP+IP
Sbjct: 497 PQHRLAYRRGATEIKQHPFFQSVNWALIRCTSPPQIP 533

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q94E49|PID2_ORYSJ Protein kinase PINOID 2 OS=Oryza sativa subsp. japonica GN=PID2 PE=2 SV=1

 Score =  353 bits (907), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 191/404 (47%), Positives = 252/404 (62%), Gaps = 39/404 (9%)

Query: 54  KPHRSSDFAYSAIRSATFGR-KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHE 112
           KPH+++   + AIR    G  + GL    F L RR+G+GD+G VYLC L   +       
Sbjct: 53  KPHKANQAEWEAIRRLRAGAGRVGL--EHFRLVRRLGSGDLGNVYLCRLREPWSSSSMTT 110

Query: 113 PC--CLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEF 170
               CLYAMKVV+K+ L  +KK+ RAE+E+ IL+ LDHPFLPTLYA+FEAS+++C+VMEF
Sbjct: 111 TAGGCLYAMKVVDKDALAFRKKLRRAEVERDILRTLDHPFLPTLYADFEASHYACLVMEF 170

Query: 171 CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI 230
           C GGDLH  R +QP +RF+++S RFY AE ++ALEYLHM+G++YRDLKPENVLVR DGHI
Sbjct: 171 CPGGDLHVARQRQPGRRFTVSSTRFYVAETVLALEYLHMMGVVYRDLKPENVLVRGDGHI 230

Query: 231 MLSDFDLSLCSNAI-----PAVESPASSPEAASPRSQTYTRQYSTRLS---RFLNRFFGS 282
           MLSDFDLSL  + +     PA  + A       P S          LS   R +++   +
Sbjct: 231 MLSDFDLSLKCDVVPKLLRPARSAAAGGKPPLPPPSSCVPPTIQPVLSCIFRGVHKCHHA 290

Query: 283 KKIQTLTPNRLFVAEPVAA---------------------RSCSFVGTHEYVSPEVASGG 321
           K+            +                         RS SFVGTHEY++PEV SG 
Sbjct: 291 KECAGGGAAAGNNGDGDGNDEEAETETAEPEVVVVEPVAARSKSFVGTHEYLAPEVISGQ 350

Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-TQSPSSMSEYH--- 377
            HG+AVDWW  G+F+YEM+YGRTPF   SNE TL NI+K+P+TFP     ++  E+    
Sbjct: 351 GHGSAVDWWTLGVFMYEMLYGRTPFKGESNEKTLINIIKQPVTFPRLAGAAAAGEWEEMK 410

Query: 378 -ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL 420
            A+DL+  LL K+P  RLGS  G+A+VK HPFFKG+N+AL+RS+
Sbjct: 411 TAQDLMLQLLAKNPKKRLGSTMGSAEVKRHPFFKGVNWALVRSV 454

Serine/threonine-protein kinase involved in the regulation of auxin signaling.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1

 Score =  322 bits (825), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 176/395 (44%), Positives = 243/395 (61%), Gaps = 51/395 (12%)

Query: 40  ELPTSKSSPENL--------SLKPHRSSDFAYSAIRSAT-FGRKTGLTFRDFDLHRRIGA 90
           ELP +   PE+L        S KPH+ ++ ++ AI  AT  G K GL  + F   + +G 
Sbjct: 527 ELPDANLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGL--KHFKPVKPLGC 584

Query: 91  GDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF 150
           GD G+V+L  L     Q  G     L+AMK ++K V+  + KVHRA +E++I  +LDHPF
Sbjct: 585 GDTGSVHLVEL-----QGSGE----LFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPF 635

Query: 151 LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML 210
           LPTLY  F+     C++ +FC GG+L ++  +QP K F    ARFYAAEV++ LEYLH L
Sbjct: 636 LPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCL 695

Query: 211 GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYST 270
           GIIYRDLKPEN+L+++DGHI+L+DFDLS  + + P V                   + ST
Sbjct: 696 GIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHV------------------IKNST 737

Query: 271 RLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWW 330
            L R  ++ F       L P   FV+EP +  S SFVGT EY++PEV +G  H +A+DWW
Sbjct: 738 SLKRRRSQEF-------LPPT--FVSEP-STPSNSFVGTEEYIAPEVITGAGHTSAIDWW 787

Query: 331 AFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP 390
           A GI +YEM+YGRTPF   + + T  NI+ K LTFP+  P S++   A+ LI GLL +DP
Sbjct: 788 ALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLA---AKQLIHGLLQRDP 844

Query: 391 CNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
            NR+GS  GA D+K H FF+ +N+ LIR ++PPE+
Sbjct: 845 SNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPEL 879

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
255571312	465	serine/threonine protein kinase, putativ	0.917	0.890	0.776	0.0
356549120	442	PREDICTED: protein kinase PINOID-like [G	0.951	0.970	0.733	1e-180
449435508	474	PREDICTED: protein kinase PINOID-like [C	0.913	0.869	0.729	1e-179
15226800	438	protein kinase-like protein [Arabidopsis	0.953	0.981	0.698	1e-172
225443982	451	PREDICTED: protein kinase PINOID [Vitis	0.895	0.895	0.727	1e-172
357519467	456	Protein kinase G11A [Medicago truncatula	0.873	0.864	0.741	1e-171
297826931	441	hypothetical protein ARALYDRAFT_321182 [	0.949	0.970	0.688	1e-170
1935918	439	putative serine/threonine protein kinase	0.951	0.977	0.683	1e-170
356528424	460	PREDICTED: protein kinase PINOID-like [G	0.911	0.893	0.711	1e-166
45271576	445	serine/threonine protein kinase [Pisum s	0.944	0.957	0.688	1e-165

>gi|255571312|ref|XP_002526605.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223534045|gb|EEF35764.1| serine/threonine protein kinase, putative [Ricinus communis]

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/429 (77%), Positives = 370/429 (86%), Gaps = 15/429 (3%)

Query: 36  RLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGT 95
           RLSFEL T++SSPENL+LKPHRSSD AYSAIRSATF RKTGLTFRDF L RRIG+GDIGT
Sbjct: 39  RLSFELLTARSSPENLTLKPHRSSDSAYSAIRSATFRRKTGLTFRDFRLIRRIGSGDIGT 98

Query: 96  VYLCSLNNKYRQDRGHE------------PCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           VYLC L  K+      +              C YAMKVV+KE L+ KKKVHRAEME+KIL
Sbjct: 99  VYLCRLTRKHNNQEEDDDFEDDHDDDDDEKLCFYAMKVVDKEALQVKKKVHRAEMERKIL 158

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           KMLDHPFLP+LYAEFEAS+FSCIVME+CSGGDL SLRHKQP+KRFSL+SARFYAAEVLVA
Sbjct: 159 KMLDHPFLPSLYAEFEASHFSCIVMEYCSGGDLLSLRHKQPYKRFSLSSARFYAAEVLVA 218

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS+AIPAVESP+ SP++ SP S  
Sbjct: 219 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPSLSPDSTSPSSLP 278

Query: 264 YTRQYSTR-LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS 322
           Y R +S++  S  LNR F SKKIQTL PNRLFVAEPV+ARSCSFVGTHEYV+PEVASGGS
Sbjct: 279 YARSHSSKTFSCLLNRLFRSKKIQTLCPNRLFVAEPVSARSCSFVGTHEYVAPEVASGGS 338

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI 382
           HGNAVDWWAFGIFIYE++YGRTPFAAPSNE TLRNIVKKPL+FPT SPSS  E HAR+LI
Sbjct: 339 HGNAVDWWAFGIFIYELMYGRTPFAAPSNEQTLRNIVKKPLSFPTHSPSSSLESHARNLI 398

Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIK 442
           SGLLNKDP +RLG+KRG+ADVKTHPFFKGLNFALIR++TPP++PG+RRQ+T PF   + K
Sbjct: 399 SGLLNKDPNSRLGTKRGSADVKTHPFFKGLNFALIRTVTPPQVPGLRRQRTTPFYQGQPK 458

Query: 443 SQSTAFDYF 451
             STAFDYF
Sbjct: 459 --STAFDYF 465

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549120|ref|XP_003542945.1| PREDICTED: protein kinase PINOID-like [Glycine max]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 322/439 (73%), Positives = 354/439 (80%), Gaps = 10/439 (2%)

Query: 19  STANSSSMSSES-CS-SFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTG 76
           S+   +SMS+ES CS SFSRLSF+LP   SSPE L +KPHRSSDFAYSAI      RK+ 
Sbjct: 8   SSTQRTSMSNESVCSTSFSRLSFDLPPPSSSPETLFVKPHRSSDFAYSAI----LRRKSA 63

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           LTFRDF L RRIGAGDIGTVYLC L +    +   E  C YAMKVV+KE +  KKK  RA
Sbjct: 64  LTFRDFHLLRRIGAGDIGTVYLCRLRHDAGDEDDDEDPCFYAMKVVDKEAVALKKKAQRA 123

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           EME+KILKM+DHPFLPTLYAEFEASNFSCIVME+CSGGDLHSL+H  P+ RFSL+SARFY
Sbjct: 124 EMERKILKMVDHPFLPTLYAEFEASNFSCIVMEYCSGGDLHSLQHNHPNNRFSLSSARFY 183

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
           AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS+AIPAVESP  S + 
Sbjct: 184 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDCSLDP 243

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
           A   +  YTRQYST  S   NR F S+K+QTL PNRLFVAEPV ARSCSFVGTHEYVSPE
Sbjct: 244 AFAPALRYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPE 303

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           VASG SHGNAVDWW+FGIFIYEM+YGRTPFA  SNE TLR+I+KKPL FPT +PSS  E 
Sbjct: 304 VASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGSSNEATLRSIIKKPLAFPTSTPSSTLEM 363

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPF 436
           HARDLISGLLNKDP  RLGSKRG+ADVK HPFF GLN ALIR++TPPE+P +RR KT PF
Sbjct: 364 HARDLISGLLNKDPNRRLGSKRGSADVKKHPFFAGLNLALIRTVTPPEVPSLRRHKTTPF 423

Query: 437 ----PDQKIKSQSTAFDYF 451
                    + Q TAFDYF
Sbjct: 424 YYPANVNNSRQQLTAFDYF 442

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435508|ref|XP_004135537.1| PREDICTED: protein kinase PINOID-like [Cucumis sativus] gi|449531119|ref|XP_004172535.1| PREDICTED: protein kinase PINOID-like [Cucumis sativus]

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 327/448 (72%), Positives = 353/448 (78%), Gaps = 36/448 (8%)

Query: 36  RLSFE----LPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAG 91
           RLSF+    LPTS+SSP +L LKPHRSSDFAYSAIR     RK+ LTFRDF L RRIGAG
Sbjct: 31  RLSFDAAIDLPTSRSSPASLHLKPHRSSDFAYSAIRR----RKSKLTFRDFRLLRRIGAG 86

Query: 92  DIGTVYLCSLNNKYR-----------------QDRGHEPCCLYAMKVVNKEVLEKKKKVH 134
           DIGTVYLC L N  +                  D   +  CLYAMKVV+K+ LE KKKV 
Sbjct: 87  DIGTVYLCQLRNLSKGCCYEDEDDEDDDVDDEDDDDDDVSCLYAMKVVDKDALELKKKVQ 146

Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           RAEME+KILKMLDHPFLPTLYAEFEAS+FSCIVMEFCSGGDLHSLRHKQP KRFSLTSAR
Sbjct: 147 RAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSAR 206

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
           FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS+A PAVESP SSP
Sbjct: 207 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSP 266

Query: 255 EAASPRSQTYTRQYSTR-------LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
             A   S  Y +             S   NR F S+K+QTL+PN LFVAEPV+ARSCSFV
Sbjct: 267 NTAFHESTAYPKTNVAVSAASAAPFSCLYNRLFRSRKVQTLSPNWLFVAEPVSARSCSFV 326

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GTHEYVSPEVA+GGSHGNAVDWWAFGIF+YE+IYGRTPFAA SNETTLR+I+KKPLTFPT
Sbjct: 327 GTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRSIIKKPLTFPT 386

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG 427
             PS   E+HARDLISGLLNKDP  RLGSKRG+AD+K HPFFKGLNFALIRSLTPPEIPG
Sbjct: 387 AVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPG 446

Query: 428 MRRQKTMPFPDQKIK----SQSTAFDYF 451
           +RR+K  P P  K K     QST FDYF
Sbjct: 447 VRRRKATPAPVAKTKDQKSGQSTGFDYF 474

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226800|ref|NP_181012.1| protein kinase-like protein [Arabidopsis thaliana] gi|75219833|sp|O64682.1|PID_ARATH RecName: Full=Protein kinase PINOID; AltName: Full=Protein kinase ABRUPTUS gi|3128224|gb|AAC26704.1| putative protein kinase [Arabidopsis thaliana] gi|7208442|gb|AAF40202.1| protein kinase PINOID [Arabidopsis thaliana] gi|330253909|gb|AEC09003.1| protein kinase-like protein [Arabidopsis thaliana]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 311/445 (69%), Positives = 351/445 (78%), Gaps = 15/445 (3%)

Query: 11  SDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPEN--LSLKPHRSSDFAYSAIRS 68
           SD      +T +  S  +ESCSSFSRLSF+ P S    E   LSLKPHRSSDFAY+ IR 
Sbjct: 5   SDGEMSLGTTNSPISSGTESCSSFSRLSFDAPPSTIPEEESFLSLKPHRSSDFAYAEIRR 64

Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE 128
               +K GLTFRDF L RRIGAGDIGTVYLC L     + R       +AMKVV+KE L 
Sbjct: 65  R---KKQGLTFRDFRLMRRIGAGDIGTVYLCRLAGDEEESR----SSYFAMKVVDKEALA 117

Query: 129 KKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
            KKK+HRAEMEK ILKMLDHPFLPTLYAEFEAS+FSCIVME+CSGGDLHSLRH+QPH+RF
Sbjct: 118 LKKKMHRAEMEKTILKMLDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHRQPHRRF 177

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           SL+SARFYAAEVLVALEYLHMLGIIYRDLKPEN+LVRSDGHIMLSDFDLSLCS++I AVE
Sbjct: 178 SLSSARFYAAEVLVALEYLHMLGIIYRDLKPENILVRSDGHIMLSDFDLSLCSDSIAAVE 237

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
           S +SSPE    RS    R++ TRL+R   R   SKK+QTL P RLFVAEPV ARS SFVG
Sbjct: 238 SSSSSPENQQLRS---PRRF-TRLARLFQRVLRSKKVQTLEPTRLFVAEPVTARSGSFVG 293

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ 368
           THEYV+PEVASGGSHGNAVDWWAFG+F+YEMIYG+TPF AP+N+  LRNIVK+ L+FPT 
Sbjct: 294 THEYVAPEVASGGSHGNAVDWWAFGVFLYEMIYGKTPFVAPTNDVILRNIVKRQLSFPTD 353

Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGM 428
           SP++M E HAR+LISGLLNKDP  RLGS+RGAA+VK HPFFKGLNFALIR+LTPPEIP  
Sbjct: 354 SPATMFELHARNLISGLLNKDPTKRLGSRRGAAEVKVHPFFKGLNFALIRTLTPPEIPSS 413

Query: 429 RRQKTMPFPDQKIKSQS--TAFDYF 451
             +K M       +S +   AFDYF
Sbjct: 414 VVKKPMKSATFSGRSSNKPAAFDYF 438

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443982|ref|XP_002274153.1| PREDICTED: protein kinase PINOID [Vitis vinifera] gi|147828664|emb|CAN62073.1| hypothetical protein VITISV_032865 [Vitis vinifera]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/436 (72%), Positives = 350/436 (80%), Gaps = 32/436 (7%)

Query: 33  SFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGD 92
           SFSRLSFE      SPENL+LKPHRSSD AY AIRSA F RK+GL+FRDF L RRIG+GD
Sbjct: 31  SFSRLSFE-----HSPENLTLKPHRSSDSAYEAIRSAAFSRKSGLSFRDFKLVRRIGSGD 85

Query: 93  IGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP 152
           IGTVYLC L +    D      C YAMKVV+KE L  KKK+ RAEMEK+ILKMLDHPFLP
Sbjct: 86  IGTVYLCRLRSSSDDD-----GCFYAMKVVDKETLAMKKKIQRAEMEKRILKMLDHPFLP 140

Query: 153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGI 212
           TLYAEFEAS+FS IVME+CSGGDLHSL+HKQP KRFSL+SARFYAAEVLVALEYLHMLGI
Sbjct: 141 TLYAEFEASHFSGIVMEYCSGGDLHSLKHKQPQKRFSLSSARFYAAEVLVALEYLHMLGI 200

Query: 213 IYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRL 272
           IYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP  SP++ SP S    R  S   
Sbjct: 201 IYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPDFSPDSPSPASPPNCRTPSP-- 258

Query: 273 SRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAF 332
               +  F S+K+QTL+ NRLFVAEPV+A+SCSFVGTHEYVSPEVASG SHGN VDWWA 
Sbjct: 259 ---FSCLFRSRKVQTLSINRLFVAEPVSAKSCSFVGTHEYVSPEVASGRSHGNGVDWWAL 315

Query: 333 GIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN 392
           GIFIYEM+YG TPFA  +NE TLRNIVKKPL+FPT++P+S+SE HARDL+SGLL KDP +
Sbjct: 316 GIFIYEMVYGATPFAGATNEATLRNIVKKPLSFPTETPASVSEMHARDLMSGLLVKDPAS 375

Query: 393 RLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPF-PDQKIKSQ------- 444
           RLGSKRGAADVKTHPFFKGLNFAL+RSLTPPEIPG+RR KT  F PD    ++       
Sbjct: 376 RLGSKRGAADVKTHPFFKGLNFALVRSLTPPEIPGLRRHKTPSFRPDSANSNKGRYHHQQ 435

Query: 445 ---------STAFDYF 451
                    STAFDYF
Sbjct: 436 QQQQQQQQQSTAFDYF 451

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519467|ref|XP_003630022.1| Protein kinase G11A [Medicago truncatula] gi|355524044|gb|AET04498.1| Protein kinase G11A [Medicago truncatula]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/410 (74%), Positives = 343/410 (83%), Gaps = 16/410 (3%)

Query: 32  SSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAG 91
           +SFSRLSF+L     SPE+LSLKPHRSSDFAYSAIR     RK+ LTFRDF L RRIGAG
Sbjct: 32  TSFSRLSFDL--LPPSPESLSLKPHRSSDFAYSAIR-----RKSALTFRDFHLLRRIGAG 84

Query: 92  DIGTVYLCSL---NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH 148
           DIGTVYLC L   N+K++ +  +   CLYAMKVV+K+V+  KKK HRAEME+KILKMLDH
Sbjct: 85  DIGTVYLCRLRNGNDKFKNEEDN--TCLYAMKVVDKDVVALKKKSHRAEMERKILKMLDH 142

Query: 149 PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
           PFLPTLYAEFEAS+FSCIVMEFCSGGDLHS+RHK PH R  L SARFYAA+VLVALEYLH
Sbjct: 143 PFLPTLYAEFEASHFSCIVMEFCSGGDLHSIRHKHPHNRLPLISARFYAAQVLVALEYLH 202

Query: 209 MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQ---TYT 265
           MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES  +  ++++  S    T +
Sbjct: 203 MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDNLQDSSTFSSTLPYTRS 262

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
           R + T  + F NR F S+K+QT+ PNRLFVAEPV+ARSCSFVGTHEYVSPEVA+G SHGN
Sbjct: 263 RSFPTPFTCFSNRLFKSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGN 322

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
           AVDWW+FGIFIYE++YGRTPFAAPSN+ TLRNI+KKPLTFPT + SS  E HARDLISGL
Sbjct: 323 AVDWWSFGIFIYELVYGRTPFAAPSNKETLRNILKKPLTFPTPTASSALELHARDLISGL 382

Query: 386 LNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI-PGMRRQKTM 434
           LNKDP  RLGSKRG+ADVK H FFKG+N ALIR LTPPE+ PG R+ KTM
Sbjct: 383 LNKDPTQRLGSKRGSADVKQHSFFKGINLALIRMLTPPEVPPGSRKPKTM 432

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826931|ref|XP_002881348.1| hypothetical protein ARALYDRAFT_321182 [Arabidopsis lyrata subsp. lyrata] gi|297327187|gb|EFH57607.1| hypothetical protein ARALYDRAFT_321182 [Arabidopsis lyrata subsp. lyrata]

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 310/450 (68%), Positives = 353/450 (78%), Gaps = 22/450 (4%)

Query: 11  SDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSS--PEN---LSLKPHRSSDFAYSA 65
           SD      +T +  S  +ESCSSFSRLSF+ P S ++  PE    LSLKPHRSSDFAY+ 
Sbjct: 5   SDGEMSLGTTNSPISSGTESCSSFSRLSFDAPPSTTAIIPEEESFLSLKPHRSSDFAYAE 64

Query: 66  IRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE 125
           IR     +K GLTFRDF L RRIGAGDIGTVYLC L     + R       +AMKVV+KE
Sbjct: 65  IRRR---KKHGLTFRDFRLMRRIGAGDIGTVYLCRLAGDEEESR----SSYFAMKVVDKE 117

Query: 126 VLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH 185
            L  KKK+HRAEMEK ILKMLDHPFLPTLYAEFEAS+FSCIVME+CSGGDLHSLRH+QP 
Sbjct: 118 ALALKKKMHRAEMEKTILKMLDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHRQPT 177

Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
           +RFSL+SARFYAAEVLVALEYLHMLGIIYRDLKPEN+LVRSDGHIMLSDFDLSLCS++I 
Sbjct: 178 RRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENILVRSDGHIMLSDFDLSLCSDSIA 237

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
           AVES +SSPE    RS     +  TRL+R  +R   SKK+QTL PNRLFVAEPV ARS S
Sbjct: 238 AVESTSSSPENHQLRSP----RRLTRLARLFHRVMRSKKVQTLEPNRLFVAEPVTARSGS 293

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           FVGTHEYV+PEVASGGSHGNAVDWWAFG+F+YEMIYG+TPF AP+N+  LRNIVK+ L+F
Sbjct: 294 FVGTHEYVAPEVASGGSHGNAVDWWAFGVFLYEMIYGKTPFVAPTNDVILRNIVKRQLSF 353

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
           PT SP++M E HAR+LISGLL KDP  RLGS+RGAA+VK HPFFKGLNFALIR+LTPPEI
Sbjct: 354 PTDSPATMFELHARNLISGLLTKDPTKRLGSRRGAAEVKVHPFFKGLNFALIRTLTPPEI 413

Query: 426 PGMRRQKTMPFPDQKIKSQST----AFDYF 451
           P    +K  P    +   +S+    AFDYF
Sbjct: 414 PSSVVKK--PMKSARFGGRSSNKPAAFDYF 441

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1935918|gb|AAB54117.1| putative serine/threonine protein kinase [Brassica rapa]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 315/461 (68%), Positives = 364/461 (78%), Gaps = 32/461 (6%)

Query: 1   MLIDSDFEPPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSS--PEN---LSLKP 55
           ML++SD E     +  TT++  SS   +ESCSSFSRLSF+ P S ++  PE    LSLKP
Sbjct: 1   MLLESDGE----MSLETTNSPISSG--TESCSSFSRLSFDAPPSTTAIIPEEESCLSLKP 54

Query: 56  HRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCC 115
           HRSSDFAY+ I      RK  LTFRDF L RRIGAGDIGTVYLC L     + R      
Sbjct: 55  HRSSDFAYAEILRR---RKHSLTFRDFRLMRRIGAGDIGTVYLCRLAGDQEESRS----S 107

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGD 175
            +AMKVV+ E L  KKK+HRAEMEKKILKMLDHPFLP+LYAEFEAS+FSCIVME+CSGGD
Sbjct: 108 YFAMKVVDNEALAMKKKMHRAEMEKKILKMLDHPFLPSLYAEFEASHFSCIVMEYCSGGD 167

Query: 176 LHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           LHSLRH+QP  RFSL+SARFYAAEVLVALEYLHMLGIIYRDLKPEN+LVRSDGHIMLSDF
Sbjct: 168 LHSLRHRQPQHRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENILVRSDGHIMLSDF 227

Query: 236 DLSLCSNAIPAVESPASSPEA---ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR 292
           DLSLCS++I AVES +S+PE    +SPR  T       RL++  NR   SKK+QTL PNR
Sbjct: 228 DLSLCSDSIAAVESSSSTPENYPHSSPRRLT-------RLAKLFNRVLRSKKVQTLEPNR 280

Query: 293 LFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
           LFVAEPV ARS SFVGTHEYV+PEVASGGSHGNAVDWWAFG+F+YE+IYGRTPFAAP+N+
Sbjct: 281 LFVAEPVTARSGSFVGTHEYVAPEVASGGSHGNAVDWWAFGVFLYEIIYGRTPFAAPTND 340

Query: 353 TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             LRNIVK+PL+FPT SP++M E HAR LISGLLNKDP  RLGS+RGAA+VK HPFFKGL
Sbjct: 341 VILRNIVKRPLSFPTDSPATMFELHARSLISGLLNKDPSTRLGSRRGAAEVKVHPFFKGL 400

Query: 413 NFALIRSLTPPEIPG-MRR-QKTMPFPDQKIKSQSTAFDYF 451
           NFALIR++TPPE+P  +RR +K+  F  +   S+  AFD+F
Sbjct: 401 NFALIRTMTPPEVPSDVRRPKKSATFGGR--SSKPAAFDFF 439

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528424|ref|XP_003532803.1| PREDICTED: protein kinase PINOID-like [Glycine max]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 310/436 (71%), Positives = 344/436 (78%), Gaps = 25/436 (5%)

Query: 32  SSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAG 91
           +SFSRLSF+L     SPE LS+KPHRSSDFAYSA     F RK  LTFRDF L RRIGAG
Sbjct: 33  TSFSRLSFDL--LPPSPETLSIKPHRSSDFAYSA----AFRRKAALTFRDFHLLRRIGAG 86

Query: 92  DIGTVYLCSLNNKYR---QDRGHEPC-CLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           DIGTVYLC L+N  +   QD   E   CLYAMKVV+K+ +  KKK  RAEMEKKILKMLD
Sbjct: 87  DIGTVYLCRLHNSNQLKNQDEDEEDVSCLYAMKVVDKDAVALKKKSQRAEMEKKILKMLD 146

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPFLPTLYAEFEAS+FSCIVMEFCSGGDLHSLR K PH RF L+SARFYAAEVLVALEYL
Sbjct: 147 HPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRFKHPHNRFPLSSARFYAAEVLVALEYL 206

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES-PASSPEA-ASPRSQTYT 265
           HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL S AIPAVES P S P + A P    YT
Sbjct: 207 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLYSEAIPAVESSPDSLPSSNALPLPYAYT 266

Query: 266 RQYS--TRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
           R +S  +  S F NR   S++++T+ PNRLFVAEPV+ARSCSFVGTHEYVSPEVASG SH
Sbjct: 267 RSHSFMSPFSCFSNR---SREVRTIEPNRLFVAEPVSARSCSFVGTHEYVSPEVASGRSH 323

Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
           GNAVDWW+FG+FIYE+IYGRTP+A PS E TLRNIVKKPL FPT +P+S  E HARDLIS
Sbjct: 324 GNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPTSNLELHARDLIS 383

Query: 384 GLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRR--QKTMPFP---- 437
           GLLNKDP  RLGSKRGAADVK HPFFKGLN ALIR  TPPE+PG RR  + T  +P    
Sbjct: 384 GLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPEVPGSRRRTKTTSLYPVKGN 443

Query: 438 --DQKIKSQSTAFDYF 451
             +   + Q+ +FD++
Sbjct: 444 GNNNHKQQQTASFDFY 459

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|45271576|gb|AAS57526.1| serine/threonine protein kinase [Pisum sativum]

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/453 (68%), Positives = 346/453 (76%), Gaps = 27/453 (5%)

Query: 13  ATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFG 72
             + T  T+ SS+  S   +SFSRLSFEL  S S  E+LS+KPHRSSDFAYSAIR     
Sbjct: 6   VNSNTQRTSLSSATESICSTSFSRLSFELLPSSSP-ESLSIKPHRSSDFAYSAIR----- 59

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNN---KYRQDRGHEPCCLYAMKVVNKEVLEK 129
            K+GLTFRDF L RRIG+GDIGTVYLC L +    Y  D   +    YAMKVV+K+ +  
Sbjct: 60  -KSGLTFRDFHLLRRIGSGDIGTVYLCRLRDSSVNYINDE--DSSFYYAMKVVDKDAVAL 116

Query: 130 KKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           KKK HRAEME+KILKMLDHPFLP+LYAEFEASNFSCIVMEFCSGGDLHSLRH+ P  RFS
Sbjct: 117 KKKSHRAEMERKILKMLDHPFLPSLYAEFEASNFSCIVMEFCSGGDLHSLRHRHPRNRFS 176

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
           L+SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS+AIPAVE 
Sbjct: 177 LSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVEL 236

Query: 250 PASSPEAASPRSQTYTRQYSTR--LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
               P    P   + TR +S          R F S+K+QT   NRLFVAEPV ARSCSFV
Sbjct: 237 SPDDP----PLDVSCTRPHSISSPFKCLSKRLFRSRKVQTFQSNRLFVAEPVEARSCSFV 292

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GTHEYVSPEVASG SHGNAVDWW+FGIFIYEM+YGRTPFA PSNE TLRNI+KKPL+FPT
Sbjct: 293 GTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLSFPT 352

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG 427
            +PSS  E HARDLISGLLNKDP  RLG KRGAADVK HPFF GLN ALIR +TPPE+PG
Sbjct: 353 ATPSSTLEMHARDLISGLLNKDPNRRLGLKRGAADVKMHPFFVGLNLALIRMVTPPEVPG 412

Query: 428 MRRQKTMPFPDQK---------IKSQSTAFDYF 451
           +RR KT PF   K          +  +++FDYF
Sbjct: 413 LRRNKTTPFVSGKDSNGNRSSSKQHPASSFDYF 445

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
TAIR|locus:2062268	438	PID "PINOID" [Arabidopsis thal	0.891	0.917	0.671	7e-141
UNIPROTKB|Q2QM77	484	PID "Protein kinase PINOID" [O	0.824	0.768	0.572	1.9e-108
UNIPROTKB|A6MW92	491	bif2 "Barren inflorescence2" [	0.818	0.751	0.543	1.6e-104
TAIR|locus:2043813	525	PID2 "PINOID2" [Arabidopsis th	0.390	0.335	0.561	1e-92
TAIR|locus:2178388	498	D6PK "D6 protein kinase" [Arab	0.394	0.357	0.550	1.1e-91
UNIPROTKB|Q5I6E9	700	Adi3 "AvrPto-dependent Pto-int	0.394	0.254	0.550	3e-91
TAIR|locus:2133837	506	D6PKL1 "D6 protein kinase like	0.392	0.349	0.552	3.8e-91
TAIR|locus:2160922	586	D6PKL2 "D6 protein kinase like	0.414	0.319	0.527	2.1e-90
TAIR|locus:2055017	765	AT2G44830 [Arabidopsis thalian	0.394	0.232	0.544	5.2e-89
TAIR|locus:2174885	499	AT5G40030 [Arabidopsis thalian	0.798	0.721	0.484	3.2e-88

TAIR|locus:2062268 PID "PINOID" [Arabidopsis thaliana (taxid:3702)]

 Score = 1378 (490.1 bits), Expect = 7.0e-141, P = 7.0e-141
 Identities = 280/417 (67%), Positives = 314/417 (75%)

Query:    39 FELPTSKSSPEN--LSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTV 96
             F+ P S    E   LSLKPHRSSDFAY+ IR     +K GLTFRDF L RRIGAGDIGTV
Sbjct:    33 FDAPPSTIPEEESFLSLKPHRSSDFAYAEIRRR---KKQGLTFRDFRLMRRIGAGDIGTV 89

Query:    97 YLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYA 156
             YLC L     + R       +AM              HRAEMEK ILKMLDHPFLPTLYA
Sbjct:    90 YLCRLAGDEEESRSS----YFAMKVVDKEALALKKKMHRAEMEKTILKMLDHPFLPTLYA 145

Query:   157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
             EFEAS+FSCIVME+CSGGDLHSLRH+QPH+RFSL+SARFYAAEVLVALEYLHMLGIIYRD
Sbjct:   146 EFEASHFSCIVMEYCSGGDLHSLRHRQPHRRFSLSSARFYAAEVLVALEYLHMLGIIYRD 205

Query:   217 LKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFL 276
             LKPEN+LVRSDGHIMLSDFDLSLCS++I               RS    R++ TRL+R  
Sbjct:   206 LKPENILVRSDGHIMLSDFDLSLCSDSIAAVESSSSSPENQQLRSP---RRF-TRLARLF 261

Query:   277 NRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
              R   SKK+QTL P RLFVAEPV ARS SFVGTHEYV+PEVASGGSHGNAVDWWAFG+F+
Sbjct:   262 QRVLRSKKVQTLEPTRLFVAEPVTARSGSFVGTHEYVAPEVASGGSHGNAVDWWAFGVFL 321

Query:   337 YEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS 396
             YEMIYG+TPF AP+N+  LRNIVK+ L+FPT SP++M E HAR+LISGLLNKDP  RLGS
Sbjct:   322 YEMIYGKTPFVAPTNDVILRNIVKRQLSFPTDSPATMFELHARNLISGLLNKDPTKRLGS 381

Query:   397 KRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQS--TAFDYF 451
             +RGAA+VK HPFFKGLNFALIR+LTPPEIP    +K M       +S +   AFDYF
Sbjct:   382 RRGAAEVKVHPFFKGLNFALIRTLTPPEIPSSVVKKPMKSATFSGRSSNKPAAFDYF 438

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IDA

GO:0009734 "auxin mediated signaling pathway" evidence=IMP

GO:0009926 "auxin polar transport" evidence=RCA;IMP

GO:0009733 "response to auxin stimulus" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0048825 "cotyledon development" evidence=IGI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

GO:0009986 "cell surface" evidence=IDA

GO:0048766 "root hair initiation" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

GO:0048827 "phyllome development" evidence=IGI

GO:0009958 "positive gravitropism" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048364 "root development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|Q2QM77 PID "Protein kinase PINOID" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 222/388 (57%), Positives = 266/388 (68%)

Query:    43 TSKSSPE-NLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSL 101
             TS S P  ++ L+PHRS D A++AIR+A+      L  RDF L RRIG GDIGTVYLC L
Sbjct:    71 TSCSPPRASVLLRPHRSGDVAWAAIRAASTTSAAPLGPRDFKLVRRIGGGDIGTVYLCRL 130

Query:   102 NNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEAS 161
                 R     E  C+YAM               RA  EK+IL+ LDHPFLPTL+A+F+A+
Sbjct:   131 ----RSSPERESPCMYAMKVVDRRAVARKQKLGRAAAEKRILRQLDHPFLPTLFADFDAT 186

Query:   162 -NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE 220
              +FSC VMEFC GGDLHSLRH+ P +RF L SARFYAAEVL+A+EYLHM+GI+YRDLKPE
Sbjct:   187 PHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPSARFYAAEVLLAIEYLHMMGIVYRDLKPE 246

Query:   221 NVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFF 280
             NVL+R+DGHIML+DFDLSL S                   +  +       L RF  R  
Sbjct:   247 NVLIRADGHIMLTDFDLSLQSTTSPSLDGDTDTDDEASGGASCFP----DHLLRFKRR-- 300

Query:   281 GSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI 340
                +     P   FVAEPV ARSCSFVGTHEYV+PEVASGG+HG AVDWWA+G+F+YE+I
Sbjct:   301 ---RNAVAAPRPRFVAEPVDARSCSFVGTHEYVAPEVASGGAHGAAVDWWAYGVFLYELI 357

Query:   341 YGRTPFAAPSNETTLRNIVKKPLTFPTQSPS-SMSEYHARDLISGLLNKDPCNRLGSKRG 399
             YGRTPFA  +NE TLRNIV++PL FP+ S S   ++  ARDLI+ LL KDP  RLGS+RG
Sbjct:   358 YGRTPFAGATNEATLRNIVRRPLAFPSGSGSCGPADADARDLIARLLAKDPAARLGSRRG 417

Query:   400 AADVKTHPFFKGLNFALIRSLTPPEIPG 427
             AADVK+HPFFK LN AL+RS  PP +PG
Sbjct:   418 AADVKSHPFFKSLNLALLRSSRPPVVPG 445

GO:0009908 "flower development" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

GO:2000012 "regulation of auxin polar transport" evidence=NAS

UNIPROTKB|A6MW92 bif2 "Barren inflorescence2" [Zea mays (taxid:4577)]

 Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
 Identities = 211/388 (54%), Positives = 261/388 (67%)

Query:    46 SSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKY 105
             SSP     +PHR+ D A++AIR+A+      L  RDF L RR+G GD+GTVYLC L    
Sbjct:    90 SSPAPAPARPHRAGDAAWAAIRAASASAAAPLGPRDFRLLRRVGGGDVGTVYLCRL---- 145

Query:   106 RQDRGHEP-CCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEAS-NF 163
             R      P CCLYAM                A  E++IL+ LDHPFLPTL+A+F+A+ +F
Sbjct:   146 RAPPAPAPVCCLYAMKVVDRRVAAAKKKLEHAAAERRILRALDHPFLPTLFADFDAAPHF 205

Query:   164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
             SC+V EFC GGDLHSLRH+ P++RF L SARFYAAEVL+ALEYLHM+GI+YRDLKPENVL
Sbjct:   206 SCVVTEFCPGGDLHSLRHRMPNRRFPLPSARFYAAEVLLALEYLHMMGIVYRDLKPENVL 265

Query:   224 VRSDGHIMLSDFDLSL-CSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
             +R+DGHIML+DFDLSL C++                       R+   RL R  +    +
Sbjct:   266 IRADGHIMLTDFDLSLQCTSTPSLEPCAAPEAAAASCFPDHLFRRRRARLRRAAS----A 321

Query:   283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
             ++     P    VAEPV ARSCSFVGTHEYV+PEVA GG HG AVDWWA G+F+YE+++G
Sbjct:   322 RR-----PPTTLVAEPVEARSCSFVGTHEYVAPEVARGGPHGAAVDWWALGVFLYELLHG 376

Query:   343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
             RTPFA   NE TLRNI ++PL+FP    +   +  ARDLI+ LL KDP +RLGS+RGAAD
Sbjct:   377 RTPFAGADNEATLRNIARRPLSFPA---AGAGDADARDLIARLLAKDPRHRLGSRRGAAD 433

Query:   403 VKTHPFFKGLNFALIRSLTPPEIPGMRR 430
             VK HPFF+GLNFAL+RS  PP +P   R
Sbjct:   434 VKAHPFFRGLNFALLRSSRPPVVPAASR 461

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2043813 PID2 "PINOID2" [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
 Identities = 105/187 (56%), Positives = 130/187 (69%)

Query:    54 KPHRSSDFAYSAIRSAT--FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGH 111
             KPH+++  A+ A+       GR  GL    F L +R+G+GDIG+VYLC +       RG 
Sbjct:    59 KPHKANQVAWEAMARLRRCCGRAVGL--EHFRLLKRLGSGDIGSVYLCQI-------RGS 109

Query:   112 EPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFC 171
                  YAM               RAEMEKKIL MLDHPF PTLYA FEAS++S +VME+C
Sbjct:   110 PETAFYAMKVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTLYAAFEASHYSFLVMEYC 169

Query:   172 SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM 231
              GGDL+++R +QP KRF+++S RFYAAE LVALEYLHM+GI+YRDLKPENVL+R DGH+M
Sbjct:   170 PGGDLYAVRLRQPSKRFTISSTRFYAAETLVALEYLHMMGIVYRDLKPENVLIREDGHVM 229

Query:   232 LSDFDLS 238
             LSDFDLS
Sbjct:   230 LSDFDLS 236

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0048825 "cotyledon development" evidence=IGI

TAIR|locus:2178388 D6PK "D6 protein kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
 Identities = 104/189 (55%), Positives = 129/189 (68%)

Query:    54 KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
             KPH+++D  + AI+ A   +  GL    F L +R+G GDIGTV+L  LN           
Sbjct:    82 KPHKANDVRWEAIQ-AVRTKHGGLGLNHFRLLKRLGCGDIGTVHLAELNGTR-------- 132

Query:   114 CCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
              C +AM               RA+ E++IL+ LDHPFLPTLY+ FE   FSC+VMEFC G
Sbjct:   133 -CYFAMKVMDKTALASRKKLLRAQTEREILQCLDHPFLPTLYSHFETEKFSCLVMEFCPG 191

Query:   174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
             GDLH+LR +QP KRF+  +A+FY AEVL+A+EYLHMLGIIYRDLKPENVLVR DGH+MLS
Sbjct:   192 GDLHTLRQRQPGKRFTEQAAKFYVAEVLLAMEYLHMLGIIYRDLKPENVLVRDDGHVMLS 251

Query:   234 DFDLSL-CS 241
             DFDLSL C+
Sbjct:   252 DFDLSLRCT 260

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009925 "basal plasma membrane" evidence=IDA

GO:0010540 "basipetal auxin transport" evidence=IGI

GO:0032880 "regulation of protein localization" evidence=RCA

UNIPROTKB|Q5I6E9 Adi3 "AvrPto-dependent Pto-interacting protein 3" [Solanum lycopersicum (taxid:4081)]

 Score = 498 (180.4 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 104/189 (55%), Positives = 126/189 (66%)

Query:    54 KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
             KPH+ +D  + AI  A   R   L    F L +R+G GDIG+VYL  L+           
Sbjct:   281 KPHKGNDPRWKAIL-AIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSGTR-------- 331

Query:   114 CCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
              C +AM               RA+ E++IL++LDHPFLPTLY  FE   FSC+VME+C G
Sbjct:   332 -CYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPG 390

Query:   174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
             GDLH+LR +QP K FS  +ARFYAAEVL+ALEYLHMLG++YRDLKPENVLVR DGHIMLS
Sbjct:   391 GDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLS 450

Query:   234 DFDLSL-CS 241
             DFDLSL C+
Sbjct:   451 DFDLSLRCA 459

GO:0005515 "protein binding" evidence=IPI

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

TAIR|locus:2133837 D6PKL1 "D6 protein kinase like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 506 (183.2 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
 Identities = 105/190 (55%), Positives = 129/190 (67%)

Query:    54 KPHRSSDFAYSAIRSATFGRKTG-LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHE 112
             KPH+++D  + AI++     K G L    F L +R+G GDIGTV+L  L         H 
Sbjct:    96 KPHKANDVRWEAIQAVR--TKHGVLGLNHFRLLKRLGCGDIGTVHLAEL---------HG 144

Query:   113 PCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCS 172
               C +AM               RA+ E++IL+ LDHPFLPTLY+ FE   FSC+VMEFC 
Sbjct:   145 TRCFFAMKVMDKGALASRKKLLRAQTEREILQCLDHPFLPTLYSHFETEKFSCLVMEFCP 204

Query:   173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
             GGDLH+LR +QP KRFS  +A+FY AEVL+A+EYLHMLGIIYRDLKPENVLVR DGH+ML
Sbjct:   205 GGDLHTLRQRQPGKRFSEQAAKFYVAEVLLAMEYLHMLGIIYRDLKPENVLVRDDGHVML 264

Query:   233 SDFDLSL-CS 241
             SDFDLSL C+
Sbjct:   265 SDFDLSLRCT 274

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2160922 D6PKL2 "D6 protein kinase like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
 Identities = 104/197 (52%), Positives = 129/197 (65%)

Query:    43 TSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLN 102
             +S SS  +   KPH+++D  + AI++    R   L    F L +R+G GDIG+VYL  L+
Sbjct:   153 SSCSSFSSTVNKPHKANDLRWEAIQAVRV-RDGLLGLSHFRLLKRLGCGDIGSVYLSELS 211

Query:   103 NKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASN 162
                    G +  C +AM               RA+ E++IL+ LDHPFLPTLY  FE   
Sbjct:   212 -------GTK--CYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEK 262

Query:   163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
             FSC+VMEFC GGDLH+LR +QP K FS  + +FY AE L+ALEYLHMLGI+YRDLKPENV
Sbjct:   263 FSCLVMEFCPGGDLHTLRQRQPGKHFSEQAVKFYIAESLLALEYLHMLGIVYRDLKPENV 322

Query:   223 LVRSDGHIMLSDFDLSL 239
             LVR DGHIMLSDFDLSL
Sbjct:   323 LVREDGHIMLSDFDLSL 339

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2055017 AT2G44830 [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 5.2e-89, Sum P(2) = 5.2e-89
 Identities = 103/189 (54%), Positives = 127/189 (67%)

Query:    54 KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
             KPH+ +D  ++AI  A   R   L    F L +R+G GDIG+VYL  L+           
Sbjct:   336 KPHKGNDPWWNAIL-AIRTRDGILGMSHFKLLKRLGCGDIGSVYLAELSGTR-------- 386

Query:   114 CCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
              C +A+              +RA+ E+ IL++LDHPFLPTLY  FE   FSC+VME+C G
Sbjct:   387 -CHFAVKVMDKASLEDRKKLNRAQTERDILQLLDHPFLPTLYTHFETDRFSCLVMEYCPG 445

Query:   174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
             GDLH+LR +QP K FS  +ARFYAAEVL+ALEYLHMLG++YRDLKPENVLVR DGHIMLS
Sbjct:   446 GDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLS 505

Query:   234 DFDLSL-CS 241
             DFDLSL C+
Sbjct:   506 DFDLSLRCA 514

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2174885 AT5G40030 [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 188/388 (48%), Positives = 239/388 (61%)

Query:    54 KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
             KPH+ +D  + AI++    +   L    F L +++G GDIG+VYL  L     ++ G   
Sbjct:    86 KPHKGNDLRWDAIQNVKCSKNEDLGLGHFRLLKKLGCGDIGSVYLAEL-----REMG--- 137

Query:   114 CCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
              C +AM               RA+ E++IL +LDHPFLPTLY+ FE   FSC++MEFCSG
Sbjct:   138 -CFFAMKVMDKGMLIGRKKLVRAQTEREILGLLDHPFLPTLYSHFETEKFSCLLMEFCSG 196

Query:   174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
             GDLH LR KQP K FS  +ARFYA+EVL+ALEYLHM+G++YRDLKPENV+VR DGHIMLS
Sbjct:   197 GDLHILRQKQPGKHFSELAARFYASEVLLALEYLHMMGVVYRDLKPENVMVREDGHIMLS 256

Query:   234 DFDLSLCS--NAIXXXXXXXXXXXXXXXRSQTYTRQYSTRL-------SRFLNRFFGSKK 284
             DFDLSL S  +                   Q      S +L       S F  RF  +K 
Sbjct:   257 DFDLSLQSFVSPTLIQSTSQPSCHIASYCIQPPCIDPSCKLPVACIQPSCFKPRFLNNKP 316

Query:   285 IQTLTPNR------LFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYE 338
              +  T         + +AEP AARS SFVGTHEY++PE+  G  HG++VDWW FGIF+YE
Sbjct:   317 RKAKTEKAGSDSLPMLIAEPTAARSMSFVGTHEYLAPEIIRGDGHGSSVDWWTFGIFLYE 376

Query:   339 MIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR 398
             ++ G+TPF    N  TL N+V +PL FP  S S    + A+DLI GLL KDP  RLG K+
Sbjct:   377 LLTGKTPFKGNGNRETLFNVVGQPLKFPEGSIS----FAAKDLIRGLLTKDPKKRLGFKK 432

Query:   399 GAADVKTHPFFKGLNFALIRSLTPPEIP 426
             GA ++K HPFF  +N+ALIRS TPPEIP
Sbjct:   433 GATEIKQHPFFNNVNWALIRSTTPPEIP 460

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2QM77	PID_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.5819	0.8514	0.7933	yes	no
O64682	PID_ARATH	2, ., 7, ., 1, 1, ., 1	0.6988	0.9534	0.9817	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	451
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-156
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-96
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-85
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-85
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-81
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-73
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-71
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-65
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-64
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-63
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-62
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-59
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-58
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-57
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-56
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-56
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-56
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-55
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-54
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-53
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-53
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	7e-52
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-51
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-51
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-51
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-51
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-50
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	6e-50
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-49
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	4e-49
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-49
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-49
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-48
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	7e-48
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	9e-47
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-46
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-45
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-45
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-45
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-44
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-44
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-43
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-43
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-43
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-43
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-42
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-41
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-40
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-40
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-40
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-39
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-39
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-39
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-38
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-38
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-38
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-37
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-37
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-35
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-34
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-33
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-32
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-31
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-30
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-29
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-28
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-27
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-26
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-26
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-26
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-25
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-25
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-25
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-24
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-24
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-23
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-23
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-23
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-23
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-22
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-22
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-22
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-22
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-22
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-21
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-21
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-21
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	7e-21
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-20
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-20
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-20
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-19
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-19
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-19
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	7e-19
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-18
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-18
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-18
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-18
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	3e-18
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-18
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-18
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-17
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-17
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-17
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-17
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-16
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-16
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-15
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-15
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-15
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-15
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-15
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	6e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-15
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-15
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	8e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-14
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-14
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-14
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-14
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-14
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-14
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	7e-14
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	9e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-13
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-13
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-13
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-13
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-13
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	6e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-13
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-12
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-12
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-12
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-12
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-12
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	5e-12
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	9e-12
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-11
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-11
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-10
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-10
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-10
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	5e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-10
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	6e-10
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-10
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-09
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	2e-09
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-09
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-09
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-09
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-09
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-09
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-09
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-08
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-08
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-08
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-08
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	6e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-07
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-07
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-07
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-07
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-07
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	5e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-07
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	6e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-07
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	7e-07
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	9e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	1e-06
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-06
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-06
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-06
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	5e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-06
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	7e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	8e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-05
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	3e-05
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	6e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	8e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	9e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-04
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-04
cd05144	198	cd05144, RIO2_C, RIO kinase family; RIO2, C-termin	4e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-04
COG0478	304	COG0478, COG0478, RIO-like serine/threonine protei	4e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	5e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	6e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	9e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.001
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.001
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.001
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.001
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.001
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.002
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.002
PRK09188	365	PRK09188, PRK09188, serine/threonine protein kinas	0.002
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.003
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.004
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.004

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  444 bits (1143), Expect = e-156
 Identities = 164/347 (47%), Positives = 211/347 (60%), Gaps = 38/347 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + F   + +G GD+G V+L        + +G     L+A+KV++K+ + K+ KV R   E
Sbjct: 1   KHFKKIKLLGKGDVGRVFLV-------RLKGTGK--LFALKVLDKKEMIKRNKVKRVLTE 51

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           ++IL  LDHPFLPTLYA F+   + C+VM++C GG+L  L  +QP K  S   ARFYAAE
Sbjct: 52  QEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAE 111

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           VL+ALEYLH+LGI+YRDLKPEN+L+   GHIMLSDFDLS  S+  P   S A    +   
Sbjct: 112 VLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRS 171

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
              +                                +E  + RS SFVGT EY++PEV S
Sbjct: 172 SVNSIP--------------------------SETFSEEPSFRSNSFVGTEEYIAPEVIS 205

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
           G  HG+AVDWW  GI +YEM+YG TPF   + + T  NI+KK +TFP   P S S   AR
Sbjct: 206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSS---AR 262

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           DLI  LL KDP  RLGSKRGAA++K HPFF+G+N+ALIR  TPP IP
Sbjct: 263 DLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIP 309

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  290 bits (744), Expect = 1e-96
 Identities = 125/322 (38%), Positives = 166/322 (51%), Gaps = 72/322 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V L     + +         LYAMKV+ K+ + K+K+V     E+ IL  ++
Sbjct: 1   LGKGSFGKVLLV----RKKDTGK-----LYAMKVLKKKKIIKRKEVEHTLTERNILSRIN 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPF+  L+  F+      +V+E+  GG+L S  H     RFS   ARFYAAE+++ALEYL
Sbjct: 52  HPFIVKLHYAFQTEEKLYLVLEYAPGGELFS--HLSKEGRFSEERARFYAAEIVLALEYL 109

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H LGIIYRDLKPEN+L+ +DGHI L+DF L               + E +S  S+T T  
Sbjct: 110 HSLGIIYRDLKPENILLDADGHIKLTDFGL---------------AKELSSEGSRTNT-- 152

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                                                 F GT EY++PEV  G  +G AV
Sbjct: 153 --------------------------------------FCGTPEYLAPEVLLGKGYGKAV 174

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           DWW+ G+ +YEM+ G+ PF A   +     I+K PL F    P  +S   ARDLISGLL 
Sbjct: 175 DWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF----PEFLSP-EARDLISGLLQ 229

Query: 388 KDPCNRLGSKRGAADVKTHPFF 409
           KDP  RLGS  GA ++K HPFF
Sbjct: 230 KDPTKRLGS-GGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  262 bits (673), Expect = 3e-85
 Identities = 119/351 (33%), Positives = 170/351 (48%), Gaps = 79/351 (22%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            DF+  + +G G  G V L       +          YA+K+++K  + K K+V     E
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGK---------YYALKILSKAKIVKLKQVEHVLNE 51

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           K+IL+ + HPFL  LY  F+  +   +VME+  GG+L S   K    RF    ARFYAA+
Sbjct: 52  KRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQ 109

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           V++ALEYLH L I+YRDLKPEN+L+ SDG+I ++D                         
Sbjct: 110 VVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITD------------------------- 144

Query: 260 RSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                               FG +K+++               R+ +  GT EY++PE+ 
Sbjct: 145 --------------------FGFAKRVKG--------------RTYTLCGTPEYLAPEII 170

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
               +G AVDWWA GI IYEM+ G  PF   +       I++  + F    PS  S   A
Sbjct: 171 LSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF----PSFFSP-DA 225

Query: 379 RDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF-ALI-RSLTPPEIP 426
           +DLI  LL  D   RLG+ K G  D+K HP+F G+++ AL+ R +  P IP
Sbjct: 226 KDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIP 276

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  260 bits (668), Expect = 4e-85
 Identities = 110/328 (33%), Positives = 149/328 (45%), Gaps = 74/328 (22%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +++  ++G G  G VYL          R  +   L A+KV+ K+  + KK   R   E K
Sbjct: 1   YEILEKLGEGSFGKVYLA---------RDKKTGKLVAIKVIKKK--KIKKDRERILREIK 49

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           ILK L HP +  LY  FE  +   +VME+C GGDL  L  K    R S   ARFY  ++L
Sbjct: 50  ILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKK--RGRLSEDEARFYLRQIL 107

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
            ALEYLH  GI++RDLKPEN+L+  DGH+ L+DF                          
Sbjct: 108 SALEYLHSKGIVHRDLKPENILLDEDGHVKLADFG------------------------- 142

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                     L+R L+                        +  +FVGT EY++PEV  G 
Sbjct: 143 ----------LARQLDP---------------------GEKLTTFVGTPEYMAPEVLLGK 171

Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL 381
            +G AVD W+ G+ +YE++ G+ PF        L   + KP          +S   A+DL
Sbjct: 172 GYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISP-EAKDL 230

Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           I  LL KDP  RL     A +   HPFF
Sbjct: 231 IRKLLVKDPEKRL----TAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  252 bits (646), Expect = 2e-81
 Identities = 111/334 (33%), Positives = 156/334 (46%), Gaps = 60/334 (17%)

Query: 81  DFDLHRRIGAGDIGTVYLCSL--NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           DF   + IG G   TV L      NK            YA+K+++K  L K+KKV   ++
Sbjct: 2   DFKFGKIIGEGSFSTVVLAKEKETNKE-----------YAIKILDKRQLIKEKKVKYVKI 50

Query: 139 EKKILKMLD-HPFLPTLYAEFEASNFSCI--VMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           EK++L  L+ HP +  LY  F+      +  V+E+   G+L     K  +        RF
Sbjct: 51  EKEVLTRLNGHPGIIKLYYTFQDE--ENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRF 106

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           YAAE+L+ALEYLH  GII+RDLKPEN+L+  D HI ++DF     +  +    SP S+  
Sbjct: 107 YAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFG---TAKVLDPNSSPESNKG 163

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
            A+       +                                   R  SFVGT EYVSP
Sbjct: 164 DATNIDSQIEKNR--------------------------------RRFASFVGTAEYVSP 191

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           E+ +    G + D WA G  IY+M+ G+ PF   +   T + I+K   +F    P +   
Sbjct: 192 ELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSF----PPNFPP 247

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             A+DLI  LL  DP +RLG   G  ++K HPFF
Sbjct: 248 -DAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  233 bits (596), Expect = 5e-73
 Identities = 119/348 (34%), Positives = 175/348 (50%), Gaps = 46/348 (13%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF++ + IG G  G V+L        +D G     +YAMKV+ K  + K+ ++     E+
Sbjct: 2   DFEVIKVIGRGAFGEVWLV-----RDKDTGQ----VYAMKVLRKSDMIKRNQIAHVRAER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL   D P++  LY  F+      +VME+  GGDL +L  +     F   +ARFY AE+
Sbjct: 53  DILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAEL 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           ++AL+ +H LG I+RD+KP+N+L+ +DGHI L+DF   LC     A +            
Sbjct: 111 VLALDSVHKLGFIHRDIKPDNILIDADGHIKLADF--GLCKKMNKAKDRE---------- 158

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
              Y       L R           Q               R+ S VGT +Y++PEV  G
Sbjct: 159 --YYLNDSHNLLFRDNVLVRRRDHKQRRV------------RANSTVGTPDYIAPEVLRG 204

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSMSEYHA 378
             +G   DWW+ G+ +YEM+YG  PF + + + T   I+  K+ L FP   P S     A
Sbjct: 205 TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSP---EA 261

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            DLI  LL  DP +RLGS     ++K+HPFFKG+++  +R   PP +P
Sbjct: 262 IDLICRLL-CDPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPFVP 305

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  225 bits (576), Expect = 3e-71
 Identities = 105/326 (32%), Positives = 147/326 (45%), Gaps = 62/326 (19%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           I  G  G V+L     K   D       +YA+KV+ K  + +K +V +   E+ IL    
Sbjct: 1   ISKGAYGRVFLAK--KKSTGD-------IYAIKVIKKADMIRKNQVDQVLTERDILSQAQ 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
            P++  LY  F+      +VME+  GGDL SL             AR Y AE+++ALEYL
Sbjct: 52  SPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYL 109

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H  GII+RDLKP+N+L+ S+GH+ L+DF LS                             
Sbjct: 110 HSNGIIHRDLKPDNILIDSNGHLKLTDFGLS----------------------------- 140

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                        G  + Q    +               VGT +Y++PEV  G  H   V
Sbjct: 141 -----------KVGLVRRQINLNDD-------EKEDKRIVGTPDYIAPEVILGQGHSKTV 182

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           DWW+ G  +YE + G  PF   + E   +NI+   + +P     S     A DLIS LL 
Sbjct: 183 DWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVS---DEAIDLISKLLV 239

Query: 388 KDPCNRLGSKRGAADVKTHPFFKGLN 413
            DP  RLG+K    ++K HPFFKG++
Sbjct: 240 PDPEKRLGAK-SIEEIKNHPFFKGID 264

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  211 bits (539), Expect = 5e-65
 Identities = 106/351 (30%), Positives = 168/351 (47%), Gaps = 75/351 (21%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G G  G V L  L              LYA+KV+ K+V+ +   V     EK++L +
Sbjct: 1   KVLGKGSFGKVLLAELKGTDE---------LYAVKVLKKDVILQDDDVECTMTEKRVLAL 51

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
              HPFL  L++ F+  +    VME+ +GGDL  + H Q   RF    ARFYAAE+++ L
Sbjct: 52  AGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDL--MFHIQRSGRFDEPRARFYAAEIVLGL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           ++LH  GIIYRDLK +NVL+ S+GHI ++DF +                 E       T 
Sbjct: 110 QFLHERGIIYRDLKLDNVLLDSEGHIKIADFGM---------------CKEGILGGVTTS 154

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           T             F G       TP+                    Y++PE+ S   +G
Sbjct: 155 T-------------FCG-------TPD--------------------YIAPEILSYQPYG 174

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
            AVDWWA G+ +YEM+ G++PF     +   ++I++  + +P      +S+  A+ ++  
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSK-EAKSILKS 229

Query: 385 LLNKDPCNRLGSKR-GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK 432
            L K+P  RLG    G  D+K HPFF+ +++  +  + + PP  P ++ + 
Sbjct: 230 FLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRF 280

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  208 bits (531), Expect = 3e-64
 Identities = 114/352 (32%), Positives = 180/352 (51%), Gaps = 70/352 (19%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK-EVLEKKKKVHRAEME 139
           +F+L R +G G  G V+L       R+  GH+   LYAMKV+ K  +++K K       E
Sbjct: 1   NFELLRVLGTGAYGKVFLV------RKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTE 54

Query: 140 KKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           +++L+ +   PFL TL+  F+      +++++ +GG+L +  H    + F+ +  R Y A
Sbjct: 55  RQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFT--HLYQREHFTESEVRVYIA 112

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           E+++AL++LH LGIIYRD+K EN+L+ S+GH++L+DF LS                    
Sbjct: 113 EIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLS-------------------- 152

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                            + F+AE    R+ SF GT EY++PEV 
Sbjct: 153 ---------------------------------KEFLAEE-EERAYSFCGTIEYMAPEVI 178

Query: 319 SGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
            GGS  H  AVDWW+ G+  +E++ G +PF     + +   I ++ L      P +MS  
Sbjct: 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSA- 237

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            ARD I  LL KDP  RLG+  GA ++K HPFF+G+++  +  + +  P  P
Sbjct: 238 EARDFIQKLLEKDPKKRLGAN-GADEIKNHPFFQGIDWDDLAAKRIPAPFKP 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  205 bits (525), Expect = 1e-63
 Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 78/333 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEMEK 140
           ++L R++G+G  GTVY                  + A+K++ K     KK +  R E+  
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGT---------GKIVAVKILKKRSEKSKKDQTARREI-- 49

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           +IL+ L HP +  L   FE  +   +VME+C GGDL     +      S   A+  A ++
Sbjct: 50  RILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSR--GGPLSEDEAKKIALQI 107

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  LEYLH  GII+RDLKPEN+L+  +G + ++D                          
Sbjct: 108 LRGLEYLHSNGIIHRDLKPENILLDENGVVKIAD-------------------------- 141

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG  K      +             +FVGT  Y++PEV  G
Sbjct: 142 -------------------FGLAKKLL-KSSSSL---------TTFVGTPWYMAPEVLLG 172

Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTFPTQSPSSMSEY 376
           G+ +G  VD W+ G+ +YE++ G+ PF+  +       +R I+  PL F     SS SE 
Sbjct: 173 GNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEE 232

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            A+DLI   LNKDP  R      A ++  HP+F
Sbjct: 233 -AKDLIKKCLNKDPSKRP----TAEEILQHPWF 260

Length = 260

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  203 bits (518), Expect = 1e-62
 Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 77/332 (23%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V L  + +K R          +A+K V K  + +  +      EK+IL+  +
Sbjct: 1   LGVGGFGRVELVKVKSKNR---------TFALKCVKKRHIVETGQQEHIFSEKEILEECN 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPF+  LY  F+   +  ++ME+C GG+L ++        F   +ARFY A V++A EYL
Sbjct: 52  HPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYL 109

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H  GIIYRDLKPEN+L+ S+G++ L DF                                
Sbjct: 110 HNRGIIYRDLKPENLLLDSNGYVKLVDFGF------------------------------ 139

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                         +KK++               ++ +F GT EYV+PE+     +  +V
Sbjct: 140 --------------AKKLK------------SGQKTWTFCGTPEYVAPEIILNKGYDFSV 173

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNE--TTLRNIVK--KPLTFPTQSPSSMSEYHARDLIS 383
           D+W+ GI +YE++ GR PF     +      +I+K    L FP     +     A+DLI 
Sbjct: 174 DYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKA-----AKDLIK 228

Query: 384 GLLNKDPCNRLG-SKRGAADVKTHPFFKGLNF 414
            LL ++P  RLG  K G  D+K H +F G ++
Sbjct: 229 QLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  195 bits (497), Expect = 3e-59
 Identities = 104/342 (30%), Positives = 150/342 (43%), Gaps = 69/342 (20%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V  C +    +         +YA K ++K+ L+K+K    A  EKKIL+ + 
Sbjct: 1   LGKGGFGEVCACQVKATGK---------MYACKKLDKKRLKKRKGEQMALNEKKILEKVS 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
             F+ +L   FE  +  C+VM   +GGDL    +      F    A FYAA+++  LE+L
Sbjct: 52  SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHL 111

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H   I+YRDLKPENVL+   G++ +SD  L        AVE                 + 
Sbjct: 112 HQRRIVYRDLKPENVLLDDHGNVRISDLGL--------AVELKGGKK----------IKG 153

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                                                   GT  Y++PEV  G  +  +V
Sbjct: 154 R--------------------------------------AGTPGYMAPEVLQGEVYDFSV 175

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           DW+A G  +YEMI GR+PF     +     + ++ L    + P   S   A+DL   LL 
Sbjct: 176 DWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSP-EAKDLCEALLQ 234

Query: 388 KDPCNRLGSK-RGAADVKTHPFFKGLNFALIRS--LTPPEIP 426
           KDP  RLG +   A +V+ HP FK LN+  + +  L PP IP
Sbjct: 235 KDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  195 bits (496), Expect = 1e-58
 Identities = 115/343 (33%), Positives = 157/343 (45%), Gaps = 76/343 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KML 146
           IG G  G V L     K++ D        YA+KV+ K+ + KKK+      E+ +L K +
Sbjct: 3   IGKGSFGKVLLA----KHKADGK-----FYAVKVLQKKAILKKKEQKHIMAERNVLLKNV 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HPFL  L+  F+ ++    V+++ +GG+L    H Q  + F    ARFYAAE+  AL Y
Sbjct: 54  KHPFLVGLHYSFQTADKLYFVLDYVNGGELFF--HLQRERSFPEPRARFYAAEIASALGY 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH L IIYRDLKPEN+L+ S GH++L+DF   LC              E       T T 
Sbjct: 112 LHSLNIIYRDLKPENILLDSQGHVVLTDF--GLCK-------------EGIEHSKTTST- 155

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                                  F GT EY++PEV     +   
Sbjct: 156 ---------------------------------------FCGTPEYLAPEVLRKQPYDRT 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSMSEYHARDLISGL 385
           VDWW  G  +YEM+YG  PF +        NI+ KPL      S S      AR L+ GL
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVS------ARHLLEGL 230

Query: 386 LNKDPCNRLGSKRGAADVKTHPFFKGLNFA--LIRSLTPPEIP 426
           L KD   RLG+K    ++K H FF  +N+   + + +TPP  P
Sbjct: 231 LQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNP 273

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  189 bits (482), Expect = 8e-57
 Identities = 115/370 (31%), Positives = 180/370 (48%), Gaps = 67/370 (18%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+  + I  G  G VYL     ++++ R       +AMK +NK+ L  + ++ +  +E+
Sbjct: 2   DFETIKLISNGAYGAVYLV----RHKETRQR-----FAMKKINKQNLILRNQIQQVFVER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAE 199
            IL   ++PF+ +++  FE     C+VME+  GGD  +L ++        +  AR Y AE
Sbjct: 53  DILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAE 109

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
            ++ALEYLH  GI++RDLKP+N+L+ S GHI L+DF LS                     
Sbjct: 110 TVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIG------------------ 151

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +S   N + G  +  T    R F+ + V        GT EY++PEV  
Sbjct: 152 -----------LMSLTTNLYEGHIEKDT----REFLDKQVC-------GTPEYIAPEVIL 189

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
              +G  VDWWA GI +YE + G  PF   + E     ++   + +P    +  ++  A+
Sbjct: 190 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPAD--AQ 247

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQ 439
           DLIS LL ++P  RLG+  GA +VK H FF GL++            G+ RQK    P  
Sbjct: 248 DLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWN-----------GLLRQKAEFIPQL 295

Query: 440 KIKSQSTAFD 449
           + +  ++ FD
Sbjct: 296 ESEDDTSYFD 305

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  190 bits (484), Expect = 1e-56
 Identities = 117/357 (32%), Positives = 185/357 (51%), Gaps = 69/357 (19%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK-VHRAEME 139
           +F+L + +G G  G V+L       R+  GH+   LYAMKV+ K  L +K K V     E
Sbjct: 1   NFELLKVLGTGAYGKVFLV------RKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTE 54

Query: 140 KKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           + +L+ +   PFL TL+  F+      +++++ SGG++ +  +++ +  FS    RFY+ 
Sbjct: 55  RNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSG 112

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           E+++ALE+LH LGI+YRD+K EN+L+ S+GH++L+DF LS                    
Sbjct: 113 EIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLS-------------------- 152

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                               F   +K +T +                F GT EY++PE+ 
Sbjct: 153 ------------------KEFLSEEKERTYS----------------FCGTIEYMAPEII 178

Query: 319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            G G HG AVDWW+ GI I+E++ G +PF       T   + ++ L      PS +    
Sbjct: 179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIG-PE 237

Query: 378 ARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ 431
           A+DL+  LL KDP  RLG+  +GA+++K HPFFKGL++  +  R + PP  P +R +
Sbjct: 238 AQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNE 294

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  188 bits (479), Expect = 4e-56
 Identities = 113/362 (31%), Positives = 164/362 (45%), Gaps = 76/362 (20%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V L       R+    +    YAMK++ KEV+  K +V     E ++L+   
Sbjct: 3   LGKGTFGKVILV------REKATGK---YYAMKILKKEVIIAKDEVAHTLTESRVLQNTR 53

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPFL  L   F+  +  C VME+ +GG+L    H    + FS   ARFY AE++ AL YL
Sbjct: 54  HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALGYL 111

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H   ++YRDLK EN+++  DGHI ++DF   LC   I                  +    
Sbjct: 112 HSCDVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI------------------SDGAT 151

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
             T                                   F GT EY++PEV     +G AV
Sbjct: 152 MKT-----------------------------------FCGTPEYLAPEVLEDNDYGRAV 176

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-TQSPSSMSEYHARDLISGLL 386
           DWW  G+ +YEM+ GR PF    +E     I+ + + FP T SP       A+ L++GLL
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPE------AKSLLAGLL 230

Query: 387 NKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKS 443
            KDP  RL G    A ++  H FF  +N+  +  + L PP  P +  +    + D++  +
Sbjct: 231 KKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTA 290

Query: 444 QS 445
           QS
Sbjct: 291 QS 292

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  189 bits (482), Expect = 5e-56
 Identities = 121/352 (34%), Positives = 182/352 (51%), Gaps = 43/352 (12%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK-EVLEKKKKVH-RAEM 138
           DF+  + IG G  G V L       ++D GH    +YAMK + K E+LEK++  H RAE 
Sbjct: 2   DFESIKVIGRGAFGEVRLVQ-----KKDTGH----IYAMKKLRKSEMLEKEQVAHVRAE- 51

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            + IL   D+P++  LY  F+  N+  ++ME+  GGD+ +L  K+    F+    RFY A
Sbjct: 52  -RDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIA 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSNAIPAVESPASSPEA 256
           E ++A++ +H LG I+RD+KP+N+L+ + GHI LSDF L   L  +         S    
Sbjct: 109 ETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALP 168

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
           ++          S R            K +T   NR  +A        S VGT +Y++PE
Sbjct: 169 SNFLDFISKPMSSKR------------KAETWKRNRRALAY-------STVGTPDYIAPE 209

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSMS 374
           V     +    DWW+ G+ +YEM+ G  PF + + + T R I+  K+ L FP + P S  
Sbjct: 210 VFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPE 269

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
              A+DLI  L   +   RLG+  G  ++K+HPFFKG+++  IR    P IP
Sbjct: 270 ---AKDLIKRLCC-EAERRLGNN-GVNEIKSHPFFKGVDWEHIRERPAPIIP 316

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  185 bits (471), Expect = 7e-55
 Identities = 105/352 (29%), Positives = 156/352 (44%), Gaps = 86/352 (24%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V L                 LYA+K + K  +  + +V     EK+I +  +
Sbjct: 7   LGRGHFGKVLLAEYKKTGE---------LYAIKALKKGDIIARDEVESLMCEKRIFETAN 57

Query: 148 ---HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
              HPFL  L+A F+  +  C VME+ +GGDL  + H      FS   A FYAA V++ L
Sbjct: 58  SERHPFLVNLFACFQTEDHVCFVMEYAAGGDL--MMHIH-TDVFSEPRAVFYAACVVLGL 114

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           +YLH   I+YRDLK +N+L+ ++G + ++DF   LC              E      +T 
Sbjct: 115 QYLHENKIVYRDLKLDNLLLDTEGFVKIADF--GLCK-------------EGMGFGDRTS 159

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           T                                        F GT E+++PEV +  S+ 
Sbjct: 160 T----------------------------------------FCGTPEFLAPEVLTETSYT 179

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI----VKKPLTFPTQSPSSMSEYHARD 380
            AVDWW  G+ IYEM+ G +PF     E    +I    V+ P     ++ S M       
Sbjct: 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRR----- 234

Query: 381 LISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFA--LIRSLTPPEIPGMR 429
               LL ++P  RLGS ++ A DVK  PFF+ +N+   L R + PP +P ++
Sbjct: 235 ----LLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIK 282

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  186 bits (473), Expect = 1e-54
 Identities = 114/358 (31%), Positives = 182/358 (50%), Gaps = 40/358 (11%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF   + IG G  G V L       ++D G     +YAMK + K  + KK ++   + E+
Sbjct: 2   DFHTVKVIGKGAFGEVRLVQ-----KKDTGK----IYAMKTLLKSEMFKKDQLAHVKAER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L   D P++ +LY  F+ + +  ++MEF  GGDL ++  K  +  FS    RFY AE 
Sbjct: 53  DVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAEC 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-----LCSNA--IPAVESPASS 253
           ++A+E +H LG I+RD+KP+N+L+   GHI LSDF LS        +A     ++  ++ 
Sbjct: 111 VLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNK 170

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
               +  S        T  S+         +I T   NR  +A        S VGT +Y+
Sbjct: 171 NRIDNRNSVAVDSINLTMSSK--------DQIATWKKNRRLMAY-------STVGTPDYI 215

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPS 371
           +PE+     +G   DWW+ G  ++E + G  PF + ++  T R I+  ++ L FP     
Sbjct: 216 APEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHL 275

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMR 429
           S     A DLI  L+  +  NRLG + GA ++K+HPFF+G+++  IR +  P IP ++
Sbjct: 276 S---VEAEDLIRRLIT-NAENRLG-RGGAHEIKSHPFFRGVDWDTIRQIRAPFIPQLK 328

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  180 bits (458), Expect = 4e-53
 Identities = 110/347 (31%), Positives = 168/347 (48%), Gaps = 74/347 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V+L       R+  G +   LYAMKV+ K  L+ + +V R +ME+ IL  ++
Sbjct: 4   LGQGSFGKVFLV------RKITGPDAGQLYAMKVLKKATLKVRDRV-RTKMERDILAEVN 56

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPF+  L+  F+      ++++F  GGDL +   K+    F+    +FY AE+ +AL++L
Sbjct: 57  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHL 114

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H LGIIYRDLKPEN+L+  +GHI L+DF L               S E+     + Y   
Sbjct: 115 HSLGIIYRDLKPENILLDEEGHIKLTDFGL---------------SKESIDHEKKAY--- 156

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                                                SF GT EY++PEV +   H  + 
Sbjct: 157 -------------------------------------SFCGTVEYMAPEVVNRRGHTQSA 179

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMSEYHARDLISGLL 386
           DWW+FG+ ++EM+ G  PF     + T+  I+K  L  P   SP       A+ L+  L 
Sbjct: 180 DWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSP------EAQSLLRALF 233

Query: 387 NKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR 430
            ++P NRLG+   G  ++K HPFF  +++  +  R + PP  P + R
Sbjct: 234 KRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGR 280

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  180 bits (458), Expect = 4e-53
 Identities = 113/364 (31%), Positives = 178/364 (48%), Gaps = 72/364 (19%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK-EVLEKKKKVHRAEMEKKILK 144
           + +G G  G V+        R+  G +   ++AMKV+ K  ++  +K     + E+ IL+
Sbjct: 2   KVLGKGGYGKVFQV------RKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILE 55

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
            + HPF+  L   F+      +++E+ SGG+L    H +    F   +A FY +E+ +AL
Sbjct: 56  AVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMHLEREGIFMEDTACFYLSEISLAL 113

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           E+LH  GIIYRDLKPEN+L+ + GH+ L+DF   LC              E+    + T+
Sbjct: 114 EHLHQQGIIYRDLKPENILLDAQGHVKLTDF--GLCK-------------ESIHEGTVTH 158

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           T                                        F GT EY++PE+     HG
Sbjct: 159 T----------------------------------------FCGTIEYMAPEILMRSGHG 178

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
            AVDWW+ G  +Y+M+ G  PF A + + T+  I+K  L  P   P    E  ARDL+  
Sbjct: 179 KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP---PYLTPE--ARDLLKK 233

Query: 385 LLNKDPCNRLGSKRG-AADVKTHPFFKGLNF--ALIRSLTPPEIPGMRRQKTMPFPDQKI 441
           LL ++P +RLG+  G AA+V++HPFF+ +N+   L R + PP  P ++ ++ +   D K 
Sbjct: 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKF 293

Query: 442 KSQS 445
             Q+
Sbjct: 294 TRQT 297

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  176 bits (447), Expect = 7e-52
 Identities = 106/339 (31%), Positives = 169/339 (49%), Gaps = 68/339 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEME 139
           +F+L + +G G  G V+L       R+  GH+   LYAMKV+ K  +++K K       E
Sbjct: 1   NFELLKVLGTGAYGKVFLV------RKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTE 54

Query: 140 KKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           +++L+ +   PFL TL+  F+      +++++ +GG+L +  H    +RF     + Y+ 
Sbjct: 55  RQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFT--HLSQRERFKEQEVQIYSG 112

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           E+++ALE+LH LGIIYRD+K EN+L+ S+GH++L+D                        
Sbjct: 113 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD------------------------ 148

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                FG  K         F  + V  R+ SF GT EY++P++ 
Sbjct: 149 ---------------------FGLSK--------EFHEDEVE-RAYSFCGTIEYMAPDIV 178

Query: 319 SGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
            GG   H  AVDWW+ G+ +YE++ G +PF     + +   I ++ L      P  MS  
Sbjct: 179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 238

Query: 377 HARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
            A+D+I  LL KDP  RLG     A ++K HPFF+ +N+
Sbjct: 239 -AKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  176 bits (447), Expect = 2e-51
 Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 77/345 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM-L 146
           +G G  G V L  L               +A+K + K+V+ +   V    +E+++L +  
Sbjct: 3   LGKGSFGKVMLAELKGTNE---------FFAIKALKKDVVLEDDDVECTMVERRVLALAW 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
           +HPFL  L+  F+       VME+ +GGDL  + H Q   RF    ARFYAAE++  L++
Sbjct: 54  EHPFLTHLFCTFQTKEHLFFVMEYLNGGDL--MFHIQSSGRFDEARARFYAAEIICGLQF 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH  GIIYRDLK +NVL+  DGHI ++D                                
Sbjct: 112 LHKKGIIYRDLKLDNVLLDKDGHIKIAD-------------------------------- 139

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                        FG  K       +          + +F GT +Y++PE+  G  +  +
Sbjct: 140 -------------FGMCKENMNGEGK----------ASTFCGTPDYIAPEILKGQKYNES 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VDWW+FG+ +YEM+ G++PF     +    +I+     FP           A+D +S L 
Sbjct: 177 VDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR-----WISKEAKDCLSKLF 231

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR 429
            +DP  RLG      D++ HPFF+G+++  +  R + PP  P ++
Sbjct: 232 ERDPTKRLGVD---GDIRQHPFFRGIDWERLEKREIPPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  175 bits (446), Expect = 2e-51
 Identities = 107/333 (32%), Positives = 155/333 (46%), Gaps = 67/333 (20%)

Query: 117 YAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL 176
           YAMK++ KEV+  K +V     E ++L+   HPFL  L   F+  +  C VME+ +GG+L
Sbjct: 23  YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 82

Query: 177 HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
               H    + F+   ARFY AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF 
Sbjct: 83  --FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF- 139

Query: 237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVA 296
             LC   I        S  A                                   + F  
Sbjct: 140 -GLCKEGI--------SDGATM---------------------------------KTFCG 157

Query: 297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
            P            EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E    
Sbjct: 158 TP------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 205

Query: 357 NIVKKPLTFP-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNF 414
            I+ + + FP T SP       A+ L++GLL KDP  RL G    A +V  H FF  +N+
Sbjct: 206 LILMEEIRFPRTLSP------EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259

Query: 415 --ALIRSLTPPEIPGMRRQKTMPFPDQKIKSQS 445
              + + L PP  P +  +    + D +  +QS
Sbjct: 260 QDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQS 292

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  176 bits (447), Expect = 2e-51
 Identities = 109/345 (31%), Positives = 162/345 (46%), Gaps = 76/345 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK--- 144
           IG G  G VY     +  R         +YAMKV++K+ +  KK+V     E+ IL    
Sbjct: 1   IGKGTFGQVYQVRKKDTRR---------IYAMKVLSKKEIVAKKEVAHTIGERNILVRTL 51

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
           + + PF+  L   F+  +   +V ++ SGG+L    H Q   RFS   A+FY AE+++AL
Sbjct: 52  LDESPFIVGLKFSFQTDSDLYLVTDYMSGGEL--FWHLQKEGRFSEDRAKFYIAELVLAL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           E+LH   I+YRDLKPEN+L+ + GHI L D                              
Sbjct: 110 EHLHKYDIVYRDLKPENILLDATGHIALCD------------------------------ 139

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-SGGSH 323
                          FG  K   LT N+          + +F GT EY++PEV      +
Sbjct: 140 ---------------FGLSK-ANLTDNKT---------TNTFCGTTEYLAPEVLLDEKGY 174

Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
              VD+W+ G+ ++EM  G +PF A   +   RNI    + FP    S       R  + 
Sbjct: 175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSD----EGRQFVK 230

Query: 384 GLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           GLLN++P +RLG+ R A ++K HPFF  +++ L+  + +TPP  P
Sbjct: 231 GLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKP 275

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  175 bits (444), Expect = 5e-51
 Identities = 110/360 (30%), Positives = 171/360 (47%), Gaps = 84/360 (23%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           +DFD+   +G G  G V +  +  K   D       +YAMKV+ K VL  ++ V   E E
Sbjct: 1   KDFDVKSLVGRGHFGEVQV--VREKATGD-------IYAMKVMKKSVLLAQETVSFFEEE 51

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYA 197
           + IL + + P++P L   F+  +   +VME+  GGDL SL  R++     F    A+FY 
Sbjct: 52  RDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ---FDEDMAQFYL 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
           AE+++A+  +H +G ++RD+KPENVL+   GHI L+DF                      
Sbjct: 109 AELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFG--------------------- 147

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                      + RL+        +K + +  P                VGT +Y++PEV
Sbjct: 148 ----------SAARLTA-------NKMVNSKLP----------------VGTPDYIAPEV 174

Query: 318 ------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQS 369
                    G++G   DWW+ G+  YEMIYGR+PF   ++  T  NI+  ++ L FP   
Sbjct: 175 LTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED- 233

Query: 370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMR 429
           P   S++   DLI  LL      RLG +     +  HPFF  +++  IR+  PP +P ++
Sbjct: 234 PKVSSDF--LDLIQSLLC-GQKERLGYEG----LCCHPFFSKIDWNNIRNSLPPFVPTLK 286

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score =  173 bits (441), Expect = 2e-50
 Identities = 110/351 (31%), Positives = 166/351 (47%), Gaps = 77/351 (21%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R IG G    V L  L    R         +YAMKV+ KE++   + +   + EK + + 
Sbjct: 1   RVIGRGSYAKVLLVELKKTRR---------IYAMKVIKKELVNDDEDIDWVQTEKHVFET 51

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             +HPFL  L++ F+  +    V+EF SGGDL  + H Q  ++     ARFY+AE+ +AL
Sbjct: 52  ASNHPFLVGLHSCFQTESRLFFVIEFVSGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
            +LH  GIIYRDLK +NVL+ ++GHI L+  D  +C              E   P   T 
Sbjct: 110 NFLHERGIIYRDLKLDNVLLDAEGHIKLT--DYGMCK-------------EGIRPGDTTS 154

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           T                                        F GT  Y++PE+  G  +G
Sbjct: 155 T----------------------------------------FCGTPNYIAPEILRGEDYG 174

Query: 325 NAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L    + P S+S   A 
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS-VKAS 233

Query: 380 DLISGLLNKDPCNRLGSKR--GAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            ++ G LNKDP  RLG     G  D+K+HPFF+ +++ L+  + + PP  P
Sbjct: 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKP 284

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  172 bits (437), Expect = 6e-50
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 75/356 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+    +G G  G V L        + +G +   LYA+K++ K+V+ +   V    +EK
Sbjct: 1   DFNFLMVLGKGSFGKVMLA-------ERKGTDE--LYAIKILKKDVIIQDDDVECTMVEK 51

Query: 141 KILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           ++L +   P FL  L++ F+  +    VME+ +GGDL  + H Q   +F    A FYAAE
Sbjct: 52  RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGKFKEPHAVFYAAE 109

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           + + L +LH  GIIYRDLK +NV++ ++GHI ++DF   +C   I               
Sbjct: 110 IAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADF--GMCKENI--------------- 152

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG K  +T                  F GT +Y++PE+ +
Sbjct: 153 --------------------FGGKTTRT------------------FCGTPDYIAPEIIA 174

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
              +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  +++    P S+S+  A 
Sbjct: 175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY----PKSLSK-EAV 229

Query: 380 DLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK 432
            +  GLL K P  RLG    G  D++ H FF+ +++  +  R + PP  P ++ ++
Sbjct: 230 SICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRR 285

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  168 bits (428), Expect = 2e-49
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 77/330 (23%)

Query: 88  IGAGDIGTVYLCS--LNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           I  G  G+VYL        Y           +A+KV+ K  +  K +V   + E+ I+ +
Sbjct: 4   ISKGAFGSVYLAKKRSTGDY-----------FAIKVLKKSDMIAKNQVTNVKAERAIMMI 52

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             + P++  LY  F++ ++  +VME+ +GGD  SL             A+ Y AEV++ +
Sbjct: 53  QGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGG--LPEDWAKQYIAEVVLGV 110

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           E LH  GII+RD+KPEN+L+   GH+ L+DF LS                          
Sbjct: 111 EDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLS-------------------------- 144

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
                 R      +F G       TP+                    Y++PE   G    
Sbjct: 145 ------RNGLENKKFVG-------TPD--------------------YLAPETILGVGDD 171

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
              DWW+ G  I+E ++G  PF A + +    NI+ + + +P +     S   A DLI+ 
Sbjct: 172 KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSP-EAVDLINR 230

Query: 385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
           LL  DP  RLG+  G  ++K+HPFFK +N+
Sbjct: 231 LLCMDPAKRLGAN-GYQEIKSHPFFKSINW 259

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score =  168 bits (428), Expect = 4e-49
 Identities = 107/352 (30%), Positives = 153/352 (43%), Gaps = 72/352 (20%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           TFR    +R +G G  G V  C +    +         +YA K + K+ ++K+K    A 
Sbjct: 1   TFR---HYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMAL 48

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +   +  F    A FYA
Sbjct: 49  NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYA 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
           AE+   LE LH   I+YRDLKPEN+L+   GHI +SD  L        AVE P       
Sbjct: 109 AEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGL--------AVEIPEG----- 155

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                                  E +  R    VGT  Y++PEV
Sbjct: 156 ---------------------------------------ETIRGR----VGTVGYMAPEV 172

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                +  + DWW  G  IYEMI G++PF     +     + ++      +     SE  
Sbjct: 173 VKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEA- 231

Query: 378 ARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFKGLNFALIRS--LTPPEIP 426
           AR +   LL KDP  RLG +  GA +VK HPFF+  NF  + +  L PP  P
Sbjct: 232 ARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score =  169 bits (429), Expect = 7e-49
 Identities = 116/345 (33%), Positives = 159/345 (46%), Gaps = 74/345 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KML 146
           IG G  G V L     K + D        YA+KV+ K+ + KKK+ +    E+ +L K L
Sbjct: 3   IGKGSFGKVLLA----KRKSDGS-----FYAVKVLQKKTILKKKEQNHIMAERNVLLKNL 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HPFL  L+  F+ +     V+++ +GG+L    H Q  + F    ARFYAAEV  A+ Y
Sbjct: 54  KHPFLVGLHYSFQTAEKLYFVLDYVNGGEL--FFHLQRERCFLEPRARFYAAEVASAIGY 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH L IIYRDLKPEN+L+ S GH++L+DF   LC              E   P   T T 
Sbjct: 112 LHSLNIIYRDLKPENILLDSQGHVVLTDF--GLCK-------------EGVEPEETTST- 155

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                                  F GT EY++PEV     +   
Sbjct: 156 ---------------------------------------FCGTPEYLAPEVLRKEPYDRT 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VDWW  G  +YEM+YG  PF +        NI+ KPL  P     +     A DL+ GLL
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVA-----ACDLLVGLL 231

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR 429
           +KD   RLG+K    ++K H FF  +N+  +  + +TPP  P + 
Sbjct: 232 HKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVA 276

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  168 bits (428), Expect = 7e-49
 Identities = 106/343 (30%), Positives = 159/343 (46%), Gaps = 74/343 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IG G  G V          Q R  +   +YA+K + K  +  + +V     E+ +L  ++
Sbjct: 1   IGKGSFGKVM---------QVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
            PF+  L   F++     +V+ F +GG+L    H Q   RF L+ ARFY AE+L ALE L
Sbjct: 52  CPFIVPLKFSFQSPEKLYLVLAFINGGEL--FHHLQREGRFDLSRARFYTAELLCALENL 109

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
           H   +IYRDLKPEN+L+   GH       ++LC                           
Sbjct: 110 HKFNVIYRDLKPENILLDYQGH-------IALCD-------------------------- 136

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                       FG  K+     ++          + +F GT EY++PE+  G  +  AV
Sbjct: 137 ------------FGLCKLNMKDDDK----------TNTFCGTPEYLAPELLLGHGYTKAV 174

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           DWW  G+ +YEM+ G  PF   +     R I+++PL FP           A+DL+ GLL+
Sbjct: 175 DWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRD-----AKDLLIGLLS 229

Query: 388 KDPCNRLGSKRGAADVKTHPFFKGLNFA--LIRSLTPPEIPGM 428
           +DP  RLG   GA ++K HPFF  L++   L++ + PP  P +
Sbjct: 230 RDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAV 271

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  168 bits (427), Expect = 1e-48
 Identities = 107/332 (32%), Positives = 159/332 (47%), Gaps = 65/332 (19%)

Query: 117 YAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL 176
           YAMK++ KEV+  K +V     E ++LK   HPFL +L   F+  +  C VME+ +GG+L
Sbjct: 23  YAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL 82

Query: 177 HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
               H    + FS    RFY AE++ AL+YLH   I+YRDLK EN+++  DGHI ++DF 
Sbjct: 83  --FFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDF- 139

Query: 237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVA 296
             LC   I          +AA+ ++                                   
Sbjct: 140 -GLCKEGI---------TDAATMKT----------------------------------- 154

Query: 297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
                    F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E    
Sbjct: 155 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 205

Query: 357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFA 415
            I+ + + FP    +      A+ L+SGLL KDP  RL G    A ++  H FF G+N+ 
Sbjct: 206 LILMEDIKFPRTLSAD-----AKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQ 260

Query: 416 LI--RSLTPPEIPGMRRQKTMPFPDQKIKSQS 445
            +  + L PP  P +  +    + D++  +Q+
Sbjct: 261 DVYDKKLVPPFKPQVTSETDTRYFDEEFTAQT 292

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  168 bits (426), Expect = 7e-48
 Identities = 112/360 (31%), Positives = 164/360 (45%), Gaps = 57/360 (15%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + IG G  G V L    +            LYAMK + K  +  + +    + E+ IL  
Sbjct: 7   KTIGIGAFGEVCLVRKVDTNA---------LYAMKTLRKADVLMRNQAAHVKAERDILAE 57

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
            D+ ++  LY  F+  +    VM++  GGD+ SL  +     F    ARFY AE+  A+E
Sbjct: 58  ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIE 115

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC-------------SNAIPAVESPAS 252
            +H +G I+RD+KP+N+L+  DGHI L+DF   LC                    +S   
Sbjct: 116 SVHKMGFIHRDIKPDNILIDRDGHIKLTDF--GLCTGFRWTHDSKYYQKGDHHRQDSMEP 173

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
           S E +                          +++ L   R    +   A   S VGT  Y
Sbjct: 174 SEEWSEI---------------------DRCRLKPLERRRKRQHQRCLAH--SLVGTPNY 210

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNI-VKKPLTFPTQSP 370
           ++PEV     +    DWW+ G+ +YEM+ G+ PF A +  ET L+ I  +  L  P+Q+ 
Sbjct: 211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAK 270

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA-LIRSLTPPEIPGMR 429
            S     A DLI  L      +RLG K GA ++K HPFFKG++FA LIR    P IP + 
Sbjct: 271 LSRE---ASDLILRLC-CGAEDRLG-KNGADEIKAHPFFKGIDFASLIRRQKAPYIPKIT 325

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score =  164 bits (415), Expect = 9e-47
 Identities = 112/344 (32%), Positives = 160/344 (46%), Gaps = 74/344 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEMEKKILKML 146
           IG G  G V L     +++ +        YA+KV+ K+ +L+KK++ H       +LK +
Sbjct: 3   IGKGSFGKVLLA----RHKAEEK-----FYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HPFL  L+  F+ ++    V+++ +GG+L    H Q  + F    ARFYAAE+  AL Y
Sbjct: 54  KHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGY 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH L I+YRDLKPEN+L+ S GHI+L+DF   LC   I                  T T 
Sbjct: 112 LHSLNIVYRDLKPENILLDSQGHIVLTDF--GLCKENI-------------EHNGTTST- 155

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                                  F GT EY++PEV     +   
Sbjct: 156 ---------------------------------------FCGTPEYLAPEVLHKQPYDRT 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VDWW  G  +YEM+YG  PF + +      NI+ KPL       +S     AR L+ GLL
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNS-----ARHLLEGLL 231

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEIPGM 428
            KD   RLG+K    ++K H FF  +N+   + + +TPP  P +
Sbjct: 232 QKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNPNV 275

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score =  163 bits (414), Expect = 1e-46
 Identities = 108/349 (30%), Positives = 169/349 (48%), Gaps = 75/349 (21%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R IG G    V L  L    +         +YAMKVV KE++   + +   + EK + + 
Sbjct: 1   RVIGRGSYAKVLLVRLKKNDQ---------IYAMKVVKKELVHDDEDIDWVQTEKHVFEQ 51

Query: 146 LD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
              +PFL  L++ F+ ++   +V+E+ +GGDL  + H Q  ++     ARFYAAE+ +AL
Sbjct: 52  ASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDL--MFHMQRQRKLPEEHARFYAAEICIAL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
            +LH  GIIYRDLK +NVL+ +DGHI L+D+   +C              E   P   T 
Sbjct: 110 NFLHERGIIYRDLKLDNVLLDADGHIKLTDY--GMCK-------------EGLGPGDTTS 154

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           T                                        F GT  Y++PE+  G  +G
Sbjct: 155 T----------------------------------------FCGTPNYIAPEILRGEEYG 174

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN---IVKKPLTFPTQSPSSMSEYHARDL 381
            +VDWWA G+ ++EM+ GR+PF   ++   +     + +  L  P + P  +S   A  +
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLS-VKASHV 233

Query: 382 ISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           + G LNKDP  RLG +   G +D+K+H FF+ +++ L+  + +TPP  P
Sbjct: 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKP 282

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score =  159 bits (403), Expect = 1e-45
 Identities = 105/352 (29%), Positives = 156/352 (44%), Gaps = 72/352 (20%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           TFR +   R +G G  G V  C +    +         +YA K + K+ ++K+K    A 
Sbjct: 1   TFRQY---RVLGKGGFGEVCACQVRATGK---------MYACKRLEKKRIKKRKGESMAL 48

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            EK+IL+ ++  F+  L   +E  +  C+V+   +GGDL    +   +  F    A FYA
Sbjct: 49  NEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYA 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
           AE+L  LE LH    +YRDLKPEN+L+   GHI +SD  L++              PE  
Sbjct: 109 AEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAV------------KIPEGE 156

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
           S R +                                            VGT  Y++PEV
Sbjct: 157 SIRGR--------------------------------------------VGTVGYMAPEV 172

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            +   +  + D+W  G  IYEMI G++PF     E   R  V + +    +  S+     
Sbjct: 173 LNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG-RKEKVKREEVDRRVLETEEVYSAKFSEE 231

Query: 378 ARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFKGLNFALIRS--LTPPEIP 426
           A+ +   LL KDP  RLG +  GA +VK HPFF+ +NF  + +  L PP +P
Sbjct: 232 AKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  159 bits (403), Expect = 3e-45
 Identities = 105/366 (28%), Positives = 163/366 (44%), Gaps = 77/366 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML- 146
           +G G  G V L  L  K            +A+K + K+V+     V    +EK++L +  
Sbjct: 3   LGKGSFGKVLLAELKGKGE---------YFAVKALKKDVVLIDDDVECTMVEKRVLALAW 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
           ++PFL  LY  F+       VMEF +GGDL  + H Q   RF L  A FYAAE++  L++
Sbjct: 54  ENPFLTHLYCTFQTKEHLFFVMEFLNGGDL--MFHIQDKGRFDLYRATFYAAEIVCGLQF 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH  GIIYRDLK +NV++  DGHI ++DF   +C   +                      
Sbjct: 112 LHSKGIIYRDLKLDNVMLDRDGHIKIADF--GMCKENV---------------------- 147

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                        FG  +  T                  F GT +Y++PE+  G  +  +
Sbjct: 148 -------------FGDNRAST------------------FCGTPDYIAPEILQGLKYTFS 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VDWW+FG+ +YEM+ G++PF     +    +I      +P           ++D++  L 
Sbjct: 177 VDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKE-----SKDILEKLF 231

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQ 444
            +DP  RLG      +++ HPFFK +N+  +  R L PP  P ++        D++  S+
Sbjct: 232 ERDPTRRLGV---VGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLSE 288

Query: 445 STAFDY 450
                Y
Sbjct: 289 KPRLSY 294

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  159 bits (404), Expect = 7e-45
 Identities = 115/349 (32%), Positives = 182/349 (52%), Gaps = 41/349 (11%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+  + IG G  G V L       ++D GH    +YAMK++ K  + +K++V     E+
Sbjct: 2   DFESLKVIGRGAFGEVRLVQ-----KKDTGH----IYAMKILRKADMLEKEQVAHIRAER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL   D  ++  ++  F+      ++MEF  GGD+ +L  K+     S  + +FY AE 
Sbjct: 53  DILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAET 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           ++A++ +H LG I+RD+KP+N+L+ + GH+ LSDF   LC+    A             R
Sbjct: 111 VLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDF--GLCTGLKKA------------HR 156

Query: 261 SQTYTRQYSTRLSRFLNRFFGSK-KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
           ++ Y        S F  +   SK K +T   NR  +A        S VGT +Y++PEV  
Sbjct: 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAY-------STVGTPDYIAPEVFM 209

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSMSEYH 377
              +    DWW+ G+ +YEM+ G  PF + + + T R ++  K+ L FP + P  +SE  
Sbjct: 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVP--ISE-K 266

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           A+DLI      D  NR+GS  G  ++K+HPFF+G+++  IR   P  IP
Sbjct: 267 AKDLILRFCT-DSENRIGSN-GVEEIKSHPFFEGVDWGHIRE-RPAAIP 312

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score =  158 bits (401), Expect = 1e-44
 Identities = 111/353 (31%), Positives = 172/353 (48%), Gaps = 77/353 (21%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R IG G    V L  L    + +R      +YAMKVV KE++   + +   + EK + + 
Sbjct: 1   RVIGRGSYAKVLLVRLK---KTER------IYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 51

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++     ARFY+AE+ +AL
Sbjct: 52  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
            YLH  GIIYRDLK +NVL+ S+GHI L+D+   +C              E   P   T 
Sbjct: 110 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCK-------------EGLRPGDTT- 153

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
                       + F G       TPN                    Y++PE+  G  +G
Sbjct: 154 ------------STFCG-------TPN--------------------YIAPEILRGEDYG 174

Query: 325 NAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L    + P S+S   A 
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS-VKAA 233

Query: 380 DLISGLLNKDPCNRLG--SKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGM 428
            ++   LNKDP  RLG   + G AD++ HPFF+ +++ L+  + + PP  P +
Sbjct: 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNI 286

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  156 bits (396), Expect = 4e-44
 Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 77/351 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM-L 146
           +G G  G V L  L              +YA+KV+ K+V+ +   V     EK+IL +  
Sbjct: 3   LGKGSFGKVMLAELKGTDE---------VYAIKVLKKDVILQDDDVDCTMTEKRILALAA 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HPFL  L+  F+  +    VME+ +GGDL  +   Q  ++F    +RFYAAEV +AL +
Sbjct: 54  KHPFLTALHCCFQTKDRLFFVMEYVNGGDL--MFQIQRSRKFDEPRSRFYAAEVTLALMF 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH  G+IYRDLK +N+L+ ++GH  L+DF   +C              E       T T 
Sbjct: 112 LHRHGVIYRDLKLDNILLDAEGHCKLADF--GMCK-------------EGILNGVTTTT- 155

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                       F G       TP+                    Y++PE+     +G +
Sbjct: 156 ------------FCG-------TPD--------------------YIAPEILQELEYGPS 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VDWWA G+ +YEM+ G+ PF A + +    +I+   + +P      +S+  A  ++   +
Sbjct: 177 VDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVW----LSK-EAVSILKAFM 231

Query: 387 NKDPCNRLG---SKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK 432
            K+P  RLG   S+ G   +K HPFFK +++ L+  R + PP  P ++ ++
Sbjct: 232 TKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKR 282

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score =  155 bits (393), Expect = 1e-43
 Identities = 110/363 (30%), Positives = 164/363 (45%), Gaps = 77/363 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V L        +  G      YAMK++ KEV+  K +V     E ++L+   
Sbjct: 3   LGKGTFGKVILVK-----EKATGR----YYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 53

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HPFL  L   F+  +  C VME+ +GG+L    H    + FS   ARFY AE++ AL+YL
Sbjct: 54  HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYL 111

Query: 208 HM-LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           H    ++YRDLK EN+++  DGHI ++DF   LC   I          + A+ ++   T 
Sbjct: 112 HSEKNVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI---------KDGATMKTFCGTP 160

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
           +Y                                            ++PEV     +G A
Sbjct: 161 EY--------------------------------------------LAPEVLEDNDYGRA 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-TQSPSSMSEYHARDLISGL 385
           VDWW  G+ +YEM+ GR PF    +E     I+ + + FP T SP       A+ L+SGL
Sbjct: 177 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP------EAKSLLSGL 230

Query: 386 LNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIK 442
           L KDP  RL G    A ++  H FF G+ +  +  + L PP  P +  +    + D++  
Sbjct: 231 LKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFT 290

Query: 443 SQS 445
           +Q 
Sbjct: 291 AQM 293

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score =  154 bits (390), Expect = 1e-43
 Identities = 102/344 (29%), Positives = 156/344 (45%), Gaps = 70/344 (20%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G V  C +    +         LYA K +NK+ L+K+K    A +EK+IL  + 
Sbjct: 1   LGKGGFGEVSACQMRATGK---------LYACKKLNKKRLKKRKGYEGAMVEKRILAKVH 51

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFYAAEVLVALE 205
             F+ +L   F+     C+VM   +GGDL  H     + +  F    A FY A+++  LE
Sbjct: 52  SRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLE 111

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           +LH   IIYRDLKPENVL+ +DG++ +SD  L        AVE             Q+ T
Sbjct: 112 HLHQRRIIYRDLKPENVLLDNDGNVRISDLGL--------AVELKD---------GQSKT 154

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
           + Y+                                      GT  +++PE+  G  +  
Sbjct: 155 KGYA--------------------------------------GTPGFMAPELLQGEEYDF 176

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
           +VD++A G+ +YEMI  R PF A   +   + + ++ L      P   S   ++     L
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSP-ASKSFCEAL 235

Query: 386 LNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIP 426
           L KDP  RLG + G  D ++THP F+ LN+  + +  L PP +P
Sbjct: 236 LAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  155 bits (393), Expect = 1e-43
 Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 77/347 (22%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G G  G V+L  L    +          +A+K + K+V+     V    +EK++L +
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQ---------FFAIKALKKDVVLMDDDVECTMVEKRVLSL 51

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             +HPFL  LY  F+       VME+ +GGDL  + H Q   +F L  A FYAAE++  L
Sbjct: 52  AWEHPFLTHLYCTFQTKENLFFVMEYLNGGDL--MFHIQSCHKFDLPRATFYAAEIICGL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           ++LH  GI+YRDLK +N+L+ +DGHI ++DF   +C   +                    
Sbjct: 110 QFLHSKGIVYRDLKLDNILLDTDGHIKIADF--GMCKENM-------------------- 147

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
                           G  K  T      F   P            +Y++PE+  G  + 
Sbjct: 148 ---------------LGDAKTCT------FCGTP------------DYIAPEILLGQKYN 174

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
            +VDWW+FG+ +YEM+ G++PF     E   ++I      +P           A+D++  
Sbjct: 175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP-----RWLTREAKDILVK 229

Query: 385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR 429
           L  ++P  RLG K    D++ HPFF+ ++++ +  R + PP  P ++
Sbjct: 230 LFVREPERRLGVK---GDIRQHPFFREIDWSALEEREIEPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  150 bits (382), Expect = 4e-43
 Identities = 85/323 (26%), Positives = 120/323 (37%), Gaps = 111/323 (34%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  GTVYL       ++          A+K++ KE  +    +     E +ILK L+
Sbjct: 1   LGEGGFGTVYLARDKKTGKK---------VAIKIIKKE--DSSSLLEELLREIEILKKLN 49

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HP +  LY  FE  N   +VME+C GG L  L  K+   + S         ++L  LEYL
Sbjct: 50  HPNIVKLYGVFEDENHLYLVMEYCEGGSLKDL-LKENEGKLSEDEILRILLQILEGLEYL 108

Query: 208 HMLGIIYRDLKPENVLVRSD-GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           H  GII+RDLKPEN+L+ SD G + L+DF LS                            
Sbjct: 109 HSNGIIHRDLKPENILLDSDNGKVKLADFGLS---------------------------- 140

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG-GSHGN 325
                      +   S K                    + VGT  Y++PEV  G G +  
Sbjct: 141 -----------KLLTSDKSLL----------------KTIVGTPAYMAPEVLLGKGYYSE 173

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
             D W+ G+ +YE+                                       +DLI  +
Sbjct: 174 KSDIWSLGVILYEL------------------------------------PELKDLIRKM 197

Query: 386 LNKDPCNRLGSKR-GAADVKTHP 407
           L KDP      KR  A ++  H 
Sbjct: 198 LQKDP-----EKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score =  152 bits (386), Expect = 1e-42
 Identities = 107/348 (30%), Positives = 157/348 (45%), Gaps = 76/348 (21%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-LEKKKKVHRAEMEKKILKML 146
           IG G  G V L       R+  G      YA+KV+ K++ L +K++ H       +LK +
Sbjct: 3   IGKGSFGKVLLAK-----RKLDGK----CYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV 53

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HPFL  L+  F+ +     V++F +GG+L    H Q  + F    ARFYAAE+  AL Y
Sbjct: 54  KHPFLVGLHYSFQTTEKLYFVLDFVNGGEL--FFHLQRERSFPEPRARFYAAEIASALGY 111

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH + I+YRDLKPEN+L+ S GH++L+DF   LC   I   ++  +              
Sbjct: 112 LHSINIVYRDLKPENILLDSQGHVVLTDF--GLCKEGIAQSDTTTT-------------- 155

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                      F   P            EY++PEV     + N 
Sbjct: 156 ---------------------------FCGTP------------EYLAPEVIRKQPYDNT 176

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-PTQSPSSMSEYHARDLISGL 385
           VDWW  G  +YEM+YG  PF          NI+ KPL   P  S ++ S      ++  L
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWS------ILEEL 230

Query: 386 LNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ 431
           L KD   RLG+K    +++ HPFF+ L++  +  + + PP  P +   
Sbjct: 231 LEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGP 278

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  149 bits (377), Expect = 5e-41
 Identities = 115/374 (30%), Positives = 188/374 (50%), Gaps = 44/374 (11%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+  + IG G  G V L       ++D GH    +YAMK++ K  + +K++V     E+
Sbjct: 2   DFESLKVIGRGAFGEVRLVQ-----KKDTGH----VYAMKILRKADMLEKEQVGHIRAER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL   D  ++  ++  F+      ++MEF  GGD+ +L  K+     +    +FY AE 
Sbjct: 53  DILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAET 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           ++A++ +H LG I+RD+KP+N+L+ S GH+ LSDF   LC+    A             R
Sbjct: 111 VLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDF--GLCTGLKKA------------HR 156

Query: 261 SQTYTRQYSTRLSRFLNRFFGSK-KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
           ++ Y     +  S F  +   SK K +T   NR  +A        S VGT +Y++PEV  
Sbjct: 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLA-------FSTVGTPDYIAPEVFM 209

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSMSEYH 377
              +    DWW+ G+ +YEM+ G  PF + + + T + ++  K+ L FP + P S     
Sbjct: 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEK--- 266

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIR---SLTPPEIPGMRRQKTM 434
           A+DLI     +   +R+G+  G  ++KT+PFF+G+++  IR   +  P EI  +      
Sbjct: 267 AKDLILRFCCEWE-HRIGAP-GVEEIKTNPFFEGVDWEHIRERPAAIPIEIKSIDDTSNF 324

Query: 435 -PFPDQKIKSQSTA 447
             FPD  I   + A
Sbjct: 325 DEFPDSDILKPTVA 338

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score =  146 bits (369), Expect = 1e-40
 Identities = 107/352 (30%), Positives = 153/352 (43%), Gaps = 72/352 (20%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           TFR +   R +G G  G V  C +    +         +YA K + K+ ++K+K    A 
Sbjct: 1   TFRHY---RVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMAL 48

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +   +  F    A FYA
Sbjct: 49  NEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYA 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
           AE+   LE L    I+YRDLKPEN+L+   GHI +SD  L        AV+ P       
Sbjct: 109 AELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGL--------AVQIPE------ 154

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                                  E V  R    VGT  Y++PEV
Sbjct: 155 --------------------------------------GETVRGR----VGTVGYMAPEV 172

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            +   +  + DWW  G  IYEMI G++PF     E   R  V + +    +  S      
Sbjct: 173 INNEKYTFSPDWWGLGCLIYEMIQGQSPFRK-RKERVKREEVDRRVKEDQEEYSEKFSED 231

Query: 378 ARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALIRS--LTPPEIP 426
           A+ +   LL K+P  RLG +  GAA VK HP FK +NF  + +  L PP  P
Sbjct: 232 AKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score =  145 bits (368), Expect = 2e-40
 Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 66/317 (20%)

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGD 175
           +YA K ++K+ L+KK     A +EK+IL+ ++ PF+  L   FE+    C+VM   +GGD
Sbjct: 20  MYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79

Query: 176 LHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           L    +    +   +     Y+A++   + +LH + I+YRD+KPENVL+   G+  LSD 
Sbjct: 80  LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDL 139

Query: 236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV 295
            L        AVE                                               
Sbjct: 140 GL--------AVELKD-------------------------------------------- 147

Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----AAPSN 351
            + +  R+    GT+ Y++PE+     +   VDW+A G  IYEM+ GRTPF       + 
Sbjct: 148 GKTITQRA----GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK 203

Query: 352 ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           E   R  ++  + F  Q+ +      ++D+    L K P +RLGS+    D + H FFK 
Sbjct: 204 EELKRRTLEDEVKFEHQNFTE----ESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259

Query: 412 LNFALIRS--LTPPEIP 426
           +NF  + +  + PP +P
Sbjct: 260 INFPRLEAGLIPPPFVP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score =  145 bits (368), Expect = 2e-40
 Identities = 106/352 (30%), Positives = 151/352 (42%), Gaps = 72/352 (20%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           TFR +   R +G G  G V  C +    +         +YA K + K+ ++K+K    A 
Sbjct: 1   TFRQY---RVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGESMAL 48

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +      F    A FYA
Sbjct: 49  NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYA 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
           AE+   LE LH   I+YRDLKPEN+L+   GHI +S  DL L  +               
Sbjct: 109 AEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS--DLGLAVHV-------------- 152

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
            P  QT                                   +  R    VGT  Y++PEV
Sbjct: 153 -PEGQT-----------------------------------IKGR----VGTVGYMAPEV 172

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                +  + DWWA G  +YEMI G++PF     +     + +       +     S   
Sbjct: 173 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSP-D 231

Query: 378 ARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALIRS--LTPPEIP 426
           AR L   LL KDP  RLG +  GA +VK HP FK +NF  + +  L PP  P
Sbjct: 232 ARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score =  143 bits (362), Expect = 1e-39
 Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 77/346 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML- 146
           IG G  G VY C      + D G     +YAMK ++K+ ++ K+    A  E+ +L ++ 
Sbjct: 2   IGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLALNERIMLSLVS 52

Query: 147 --DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             D PF+  +   F   +    +++  +GGDLH   H   H  FS    RFYAAE+++ L
Sbjct: 53  TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEAEMRFYAAEIILGL 110

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           E++H   ++YRDLKP N+L+   GH+ +S  DL L  +                      
Sbjct: 111 EHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACD---------------------- 146

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV-ASGGSH 323
                          F  KK             P A+     VGTH Y++PEV   G ++
Sbjct: 147 ---------------FSKKK-------------PHAS-----VGTHGYMAPEVLQKGVAY 173

Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
            ++ DW++ G  +++++ G +PF     +     I +  LT   + P S S    R L+ 
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSP-ELRSLLE 231

Query: 384 GLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           GLL +D   RLG   RGA +VK HPFF+ L++ ++  +   PP IP
Sbjct: 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  144 bits (364), Expect = 2e-39
 Identities = 109/353 (30%), Positives = 168/353 (47%), Gaps = 75/353 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF++ + IG G  G V +  L N  +         ++AMK++NK  + K+ +      E+
Sbjct: 2   DFEILKVIGRGAFGEVAVVKLKNADK---------VFAMKILNKWEMLKRAETACFREER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L   D+ ++ TL+  F+  N   +VM++  GGDL +L  K    R     ARFY AE+
Sbjct: 53  DVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEM 111

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           ++A++ +H L  ++RD+KP+N+L+  +GHI L+D                          
Sbjct: 112 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD-------------------------- 145

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FGS          L + E    +S   VGT +Y+SPE+   
Sbjct: 146 -------------------FGSC---------LKLMEDGTVQSSVAVGTPDYISPEILQA 177

Query: 321 -----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSM 373
                G +G   DWW+ G+ +YEM+YG TPF A S   T   I+  K+   FP Q  + +
Sbjct: 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQV-TDV 236

Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           SE  A+DLI  L+     +RLG + G  D K HPFF G+++  IR+   P IP
Sbjct: 237 SE-DAKDLIRRLICSRE-HRLG-QNGIEDFKQHPFFTGIDWDNIRNCEAPYIP 286

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  144 bits (365), Expect = 5e-39
 Identities = 105/357 (29%), Positives = 157/357 (43%), Gaps = 85/357 (23%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DFD+ + IG G  G V L       R     +   +YAMK+++K  + K+        E+
Sbjct: 44  DFDVIKVIGRGAFGEVQLV------RHKSSKQ---VYAMKLLSKFEMIKRSDSAFFWEER 94

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
            I+   +  ++  L+  F+   +  +VME+  GGDL +L   +  P K      ARFY A
Sbjct: 95  DIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKW-----ARFYTA 149

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS--SPEA 256
           EV++AL+ +H +G I+RD+KP+N+L+   GH+ L+DF   +  +A   V    +  +P+ 
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDY 209

Query: 257 ASP---RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
            SP   +SQ     Y                                 R C         
Sbjct: 210 ISPEVLKSQGGDGYY--------------------------------GREC--------- 228

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPS 371
                         DWW+ G+F+YEM+ G TPF A S   T   I+  K  LTFP     
Sbjct: 229 --------------DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--I 272

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG--LNFALIRSLTPPEIP 426
            +S+  A+DLI   L      RLG + G  ++K+HPFFK     F  IR    P +P
Sbjct: 273 EISK-QAKDLICAFLTDRE-VRLG-RNGVDEIKSHPFFKNDQWTFDNIRETVAPVVP 326

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score =  142 bits (360), Expect = 2e-38
 Identities = 105/320 (32%), Positives = 163/320 (50%), Gaps = 30/320 (9%)

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGD 175
           LYAMK + K+ +  + +V   + E+ IL   D+ ++  LY  F+  +    VM++  GGD
Sbjct: 28  LYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGD 87

Query: 176 LHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           + SL  +   + F    ARFY AE+ +A+E +H +G I+RD+KP+N+L+  DGHI L+DF
Sbjct: 88  MMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDF 145

Query: 236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV 295
              LC+           +  +   +  ++ RQ S   S   +     +       +RL  
Sbjct: 146 --GLCTGF-------RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCR-----CGDRLKT 191

Query: 296 AEPVAARS---C---SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
            E  A +    C   S VGT  Y++PEV     +    DWW+ G+ ++EM+ G+ PF AP
Sbjct: 192 LEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAP 251

Query: 350 S-NETTLRNI-VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP 407
           +  ET L+ I  +  L  P Q   S     A DLI+ L       RLG + GA D+K HP
Sbjct: 252 TPTETQLKVINWENTLHIPPQVKLSP---EAVDLITKLCCSAE-ERLG-RNGADDIKAHP 306

Query: 408 FFKGLNFAL-IRSLTPPEIP 426
           FF  ++F+  IR+   P +P
Sbjct: 307 FFSEVDFSSDIRTQPAPYVP 326

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  142 bits (360), Expect = 2e-38
 Identities = 108/320 (33%), Positives = 164/320 (51%), Gaps = 30/320 (9%)

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGD 175
           LYAMK + K+ +  + +V   + E+ IL   D+ ++  LY  F+  +    VM++  GGD
Sbjct: 28  LYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGD 87

Query: 176 LHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           + SL  +     F    ARFY AE+  A+E +H +G I+RD+KP+N+L+  DGHI L+DF
Sbjct: 88  MMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDF 145

Query: 236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV 295
              LC+           + ++   +S  + RQ S   S   N +      +    +RL  
Sbjct: 146 --GLCTGF-------RWTHDSKYYQSGDHVRQDSMDFS---NEWGDPANCR--CGDRLKP 191

Query: 296 AEPVAARS---C---SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
            E  AAR    C   S VGT  Y++PEV     +    DWW+ G+ +YEM+ G+ PF A 
Sbjct: 192 LERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ 251

Query: 350 SNETTLRNIVK--KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP 407
           +   T   ++     L  P Q+  S     A DLI  L  + P +RLG K GA ++K HP
Sbjct: 252 TPLETQMKVINWQTSLHIPPQAKLSP---EASDLIIKLC-RGPEDRLG-KNGADEIKAHP 306

Query: 408 FFKGLNFAL-IRSLTPPEIP 426
           FFK ++F+  +R  + P IP
Sbjct: 307 FFKTIDFSSDLRQQSAPYIP 326

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  138 bits (349), Expect = 7e-38
 Identities = 86/330 (26%), Positives = 127/330 (38%), Gaps = 81/330 (24%)

Query: 86  RRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-EMEKKIL 143
             +G G  G+VYL    +             L A+K V  E+    ++   A E E +IL
Sbjct: 6   ELLGRGSFGSVYLALDKDTG----------ELMAVKSV--ELSGDSEEELEALEREIRIL 53

Query: 144 KMLDHPFLPT-LYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
             L HP +     +E  E  N   I +E+ SGG L SL  K    +      R Y  ++L
Sbjct: 54  SSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQIL 111

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
             L YLH  GI++RD+K  N+LV SDG + L+DF                          
Sbjct: 112 EGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGC------------------------ 147

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                               +K++  +                S  GT  +++PEV  G 
Sbjct: 148 --------------------AKRLGDIETGEGTG---------SVRGTPYWMAPEVIRGE 178

Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSPSSMSEYHARD 380
            +G A D W+ G  + EM  G+ P++   N       I       P + P  +SE  A+D
Sbjct: 179 EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPEHLSE-EAKD 235

Query: 381 LISGLLNKDPCNRLGSKRG-AADVKTHPFF 409
            +   L +DP      KR  A ++  HPF 
Sbjct: 236 FLRKCLRRDP-----KKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  141 bits (354), Expect = 1e-37
 Identities = 103/385 (26%), Positives = 147/385 (38%), Gaps = 81/385 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            + + R++G G  G VYL                   A+KV+ K++  K K+V R   E 
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLV------------ALKVLAKKLESKSKEVERFLREI 48

Query: 141 KILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAA 198
           +IL  L+HP  +  LY  F+      +VME+  GG L  L +        S + A F  A
Sbjct: 49  QILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILA 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGH-IMLSDFDLSLCSNAIPAVESPASSPEAA 257
           ++L ALEYLH  GII+RD+KPEN+L+  DG  + L DF L+                   
Sbjct: 109 QILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLA------------------- 149

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                   +      S                               + VGT  Y++PEV
Sbjct: 150 --------KLLPDPGSTSSIPAL----------------------PSTSVGTPGYMAPEV 179

Query: 318 ASGGSHGN---AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT------- 367
             G S      + D W+ GI +YE++ G  PF    N +     +K  L  PT       
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239

Query: 368 -QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIR--SLTPPE 424
             S   +    A DL+  LL KDP NRL S    +   +H     L         L  P+
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSS----SSDLSHDLLAHLKLKESDLSDLLKPD 295

Query: 425 IPGMRRQKTMPFPDQKIKSQSTAFD 449
                R    P  +  I S ++   
Sbjct: 296 DSAPLRLSLPPSLEALISSLNSLAI 320

Length = 384

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  135 bits (343), Expect = 5e-37
 Identities = 89/330 (26%), Positives = 129/330 (39%), Gaps = 79/330 (23%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            F++  +IG G  G VY      K R  R  +     A+KV+  E  EKK+K+     E 
Sbjct: 1   LFEILEKIGKGGFGEVY------KARHKRTGK---EVAIKVIKLESKEKKEKIIN---EI 48

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           +ILK   HP +   Y  +   +   IVMEFCSGG L  L         + +   +   E+
Sbjct: 49  QILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQ-TLTESQIAYVCKEL 107

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  LEYLH  GII+RD+K  N+L+ SDG + L D                          
Sbjct: 108 LKGLEYLHSNGIIHRDIKAANILLTSDGEVKLID-------------------------- 141

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG     + T  R            + VGT  +++PEV +G
Sbjct: 142 -------------------FGLSAQLSDTKARN-----------TMVGTPYWMAPEVING 171

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMSEYHAR 379
             +    D W+ GI   E+  G+ P++       L  I       P  ++P   S+   +
Sbjct: 172 KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG--PPGLRNPEKWSD-EFK 228

Query: 380 DLISGLLNKDPCNRLGSKR-GAADVKTHPF 408
           D +   L K+P      KR  A  +  HPF
Sbjct: 229 DFLKKCLQKNP-----EKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score =  132 bits (332), Expect = 3e-35
 Identities = 102/346 (29%), Positives = 160/346 (46%), Gaps = 77/346 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML- 146
           IG G  G VY C      + D G     +YAMK ++K+ ++ K+    A  E+ +L ++ 
Sbjct: 2   IGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLALNERIMLSLVS 52

Query: 147 --DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             D PF+  +   F   +  C +++  +GGDLH   H   H  FS    RFYA E+++ L
Sbjct: 53  TGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHY--HLSQHGVFSEKEMRFYATEIILGL 110

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           E++H   ++YRDLKP N+L+   GH+ +S  DL L  +                      
Sbjct: 111 EHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACD---------------------- 146

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV-ASGGSH 323
                          F  KK             P A+     VGTH Y++PEV   G ++
Sbjct: 147 ---------------FSKKK-------------PHAS-----VGTHGYMAPEVLQKGTAY 173

Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
            ++ DW++ G  +++++ G +PF     +     I +  LT   + P S S    + L+ 
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSP-ELKSLLE 231

Query: 384 GLLNKDPCNRLGSK-RGAADVKTHPFFKGLNF--ALIRSLTPPEIP 426
           GLL +D   RLG   RGA +VK H FFKG+++    ++   PP IP
Sbjct: 232 GLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  130 bits (329), Expect = 1e-34
 Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 15/157 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN-KEVLEKKKKVHRAEME 139
           D +  + +G G  G V+L     + R    +     YA+KV+   EV+  K++ H    E
Sbjct: 2   DLERIKTVGTGTFGRVHLV----RDRISEHY-----YALKVMAIPEVIRLKQEQH-VHNE 51

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
           K++LK + HPF+  L+       F  ++ME+  GG+L S LR+     RFS ++  FYA+
Sbjct: 52  KRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS---GRFSNSTGLFYAS 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           E++ ALEYLH   I+YRDLKPEN+L+  +GHI L+DF
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDF 145

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  126 bits (319), Expect = 2e-33
 Identities = 86/338 (25%), Positives = 129/338 (38%), Gaps = 85/338 (25%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP-CCLYAMKVVNKEVLEKKKKVHRAEME 139
           D +  + +G G  G VY             H+P   +YA+K ++  V   ++   +   E
Sbjct: 2   DLERVKVLGQGSSGVVYKVR----------HKPTGKIYALKKIH--VDGDEEFRKQLLRE 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K L+  + P++   Y  F       IV+E+  GG L  L   +   +       + A +
Sbjct: 50  LKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLL--KKVGKIPEPVLAYIARQ 107

Query: 200 VLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           +L  L+YLH    II+RD+KP N+L+ S G + ++D                        
Sbjct: 108 ILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIAD------------------------ 143

Query: 259 PRSQTYTRQYSTRLSRFLNRFFG-SKKI-QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                FG SK +  TL                +FVGT  Y+SPE
Sbjct: 144 ---------------------FGISKVLENTLDQCN------------TFVGTVTYMSPE 170

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---TTLRNIVKKPLTFPTQSPSSM 373
              G S+  A D W+ G+ + E   G+ PF  P        ++ I   P   P+      
Sbjct: 171 RIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP--PSLPAEEF 228

Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S    RD IS  L KDP  R      AA++  HPF K 
Sbjct: 229 SP-EFRDFISACLQKDPKKR----PSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  122 bits (309), Expect = 4e-32
 Identities = 89/333 (26%), Positives = 125/333 (37%), Gaps = 85/333 (25%)

Query: 86  RRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK--KKVHRAEMEKKI 142
            +IG G  G VY   +L+             L A+K +  +  + K  K++     E K+
Sbjct: 6   NKIGGGTFGKVYTAVNLDTG----------ELMAVKEIRIQDNDPKTIKEIAD---EMKV 52

Query: 143 LKMLDHPFLPTLYA-EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF-SLTSARFYAAEV 200
           L++L HP L   Y  E        I ME+CSGG L  L     H R       R Y  ++
Sbjct: 53  LELLKHPNLVKYYGVEVHREKV-YIFMEYCSGGTLEELLE---HGRILDEHVIRVYTLQL 108

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  L YLH  GI++RD+KP N+ +  +G I L D                          
Sbjct: 109 LEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGD-------------------------- 142

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG      L  N   + E V     S  GT  Y++PEV +G
Sbjct: 143 -------------------FGCAVK--LKNNTTTMGEEVQ----SLAGTPAYMAPEVITG 177

Query: 321 GS---HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSSMSE 375
           G    HG A D W+ G  + EM  G+ P++   NE  +   V        P     S   
Sbjct: 178 GKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPE- 236

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
              +D +   L  DP  R      A+++  HPF
Sbjct: 237 --GKDFLDRCLESDPKKRP----TASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  122 bits (307), Expect = 3e-31
 Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 13/179 (7%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF +  ++G G  G V+L       ++    E     A+K + K +L K  +V     E+
Sbjct: 2   DFQILTQVGQGGYGQVFLA------KKKDTGEIV---ALKRMKKSLLFKLNEVRHVLTER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL      +L  L   F+   +  + ME+  GGD  +L +       S   ARFY AE+
Sbjct: 53  DILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEM 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
             A++ LH LG I+RDLKPEN L+ + GHI L+DF LS     +    S   SP+  +P
Sbjct: 111 FEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLS--KGIVTYANSVVGSPDYMAP 167

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  118 bits (298), Expect = 5e-30
 Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 15/157 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSL--NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           DF++   +G G  G V +       +Y           YA+K + K  + K K+V     
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGTGEY-----------YAIKCLKKREILKMKQVQHVAQ 67

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           EK IL  L HPF+  +   F+  N    ++EF  GG+L +  H +   RF    A+FY A
Sbjct: 68  EKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFT--HLRKAGRFPNDVAKFYHA 125

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           E+++A EYLH   IIYRDLKPEN+L+ + GH+ ++DF
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDF 162

Length = 329

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  115 bits (291), Expect = 1e-29
 Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F+L R IG G  G V +       ++        ++AMK +NK+   +K  V     E++
Sbjct: 2   FELLRVIGKGAFGKVCIVQKR-DTKK--------MFAMKYMNKQKCVEKGSVRNVLNERR 52

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLR-HKQPHKRFSLTSARFYAAEV 200
           IL+ L+HPFL  L+  F+      +V++   GGDL   R H     +FS    +F+  E+
Sbjct: 53  ILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDL---RYHLSQKVKFSEEQVKFWICEI 109

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++ALEYLH  GII+RD+KP+N+L+   GH+ ++DF+++
Sbjct: 110 VLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIA 147

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  114 bits (288), Expect = 1e-28
 Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R +G G  G V L  L    R         LYA+KV+ K+V+ +   V     EK+IL +
Sbjct: 1   RVLGKGSFGKVMLARLKESGR---------LYAVKVLKKDVILQDDDVECTMTEKRILSL 51

Query: 146 L-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             +HPFL  LY  F+  +    VMEF +GGDL  + H Q  +RF    ARFYAAE+  AL
Sbjct: 52  ARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEITSAL 109

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            +LH  GIIYRDLK +NVL+  +GH  L+DF   +C   I
Sbjct: 110 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADF--GMCKEGI 147

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  112 bits (281), Expect = 1e-27
 Identities = 54/133 (40%), Positives = 69/133 (51%), Gaps = 7/133 (5%)

Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+ +  GT EY++PEV     HG AVDWW  G+ +YE I G  PF   +     
Sbjct: 165 AKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY 224

Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             I+   L FP     +  +  ARDL+ GLL  D   RLG+ K G ADVK HP+F G N+
Sbjct: 225 EKILAGRLKFP-----NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANW 279

Query: 415 -ALIRSLTPPEIP 426
             L     P  IP
Sbjct: 280 DKLYARYYPAPIP 292

Length = 329

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  109 bits (275), Expect = 2e-27
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN-KEVLEKKKKVHRAEME 139
            +++ ++IG G  G VYL     K           LY +K ++   + EK+++   A  E
Sbjct: 1   KYEIIKQIGKGSFGKVYLVR--RKSDGK-------LYVLKEIDLSNMSEKERE--DALNE 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYA 197
            KILK L+HP +   Y  FE     CIVME+  GGDL     + K+  K F       + 
Sbjct: 50  VKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF 109

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            ++ +AL+YLH   I++RD+KP+N+ + S+G + L DF +S
Sbjct: 110 VQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score =  112 bits (281), Expect = 2e-26
 Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 11/161 (6%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           +  +F + + I  G  G VYL    N  +         LYA+KVV K  +  K  VH+ +
Sbjct: 2   SIEEFVIVKPISRGAFGKVYLGRKKNNSK---------LYAVKVVKKADMINKNMVHQVQ 52

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E+  L +   PF+  LY   +++N   +VME+  GGD+ SL H   +  F    A  Y 
Sbjct: 53  AERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYI 110

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +EV +AL+YLH  GII+RDLKP+N+L+ ++GHI L+DF LS
Sbjct: 111 SEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  106 bits (267), Expect = 2e-26
 Identities = 77/319 (24%), Positives = 120/319 (37%), Gaps = 81/319 (25%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM-- 138
           DF++  +IG G  G V+        R+        +YAMK ++   L K  +  R E   
Sbjct: 1   DFEILNKIGKGSFGVVF-----KVVRKADKR----VYAMKQID---LSKMNRREREEAID 48

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA-RFYA 197
           E ++L  LD  ++   Y  F       IVME+   GDLH L   Q  +        RF+ 
Sbjct: 49  EARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF- 107

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            ++L+ L +LH   I++RD+K  N+ + +  ++ + D                       
Sbjct: 108 IQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGD----------------------- 144

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                  G  K+  L+ N  F      A   + VGT  Y+SPE+
Sbjct: 145 ----------------------LGVAKL--LSDNTNF------AN--TIVGTPYYLSPEL 172

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---KPLTFPTQSPSSMS 374
                +    D WA G+ +YE   G+ PF A +    +  I++    P+       S M 
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV-------SQMY 225

Query: 375 EYHARDLISGLLNKDPCNR 393
                 LI   L KD   R
Sbjct: 226 SQQLAQLIDQCLTKDYRQR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  106 bits (267), Expect = 3e-26
 Identities = 81/324 (25%), Positives = 126/324 (38%), Gaps = 72/324 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRAEMEKKILKM 145
           +G G  G VYLC     Y  D G E     A+K V  +    E KK+V+  E E ++LK 
Sbjct: 10  LGQGAFGRVYLC-----YDVDTGRE----LAVKQVPFDPDSPETKKEVNALECEIQLLKN 60

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L H  +   Y          I ME+  GG +      + +   + T  R Y  ++L  +E
Sbjct: 61  LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKD--QLKAYGALTETVTRKYTRQILEGVE 118

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           YLH   I++RD+K  N+L  S G++ L DF                              
Sbjct: 119 YLHSNMIVHRDIKGANILRDSAGNVKLGDFG----------------------------- 149

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                           SK++QT+  +   +         S  GT  ++SPEV SG  +G 
Sbjct: 150 ---------------ASKRLQTICSSGTGMK--------SVTGTPYWMSPEVISGEGYGR 186

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
             D W+ G  + EM+  + P+A       +  I  +P     Q PS +S   AR+ +   
Sbjct: 187 KADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--QLPSHVSP-DARNFLRRT 243

Query: 386 LNKDPCNRLGSKRGAADVKTHPFF 409
             ++       +  A ++  H F 
Sbjct: 244 FVEN----AKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  105 bits (264), Expect = 2e-25
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 16/190 (8%)

Query: 49  ENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQD 108
           +NL L   + SD       +    RK  + + DF+  R +G G  G V L +  N+    
Sbjct: 5   KNLQLHKKKDSD------STKEPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNE---- 54

Query: 109 RGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVM 168
               P    A+K   K  + K+K+V     E+KIL  ++HPF   LY  F+  ++  +V+
Sbjct: 55  -DFPPV---AIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL 110

Query: 169 EFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
           EF  GG+  +   +  +KRF      FYAA++++  EYL  L I+YRDLKPEN+L+  DG
Sbjct: 111 EFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG 168

Query: 229 HIMLSDFDLS 238
            I ++DF  +
Sbjct: 169 FIKMTDFGFA 178

Length = 340

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  102 bits (257), Expect = 6e-25
 Identities = 79/324 (24%), Positives = 129/324 (39%), Gaps = 77/324 (23%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI--LKM 145
           +G+G  G+VY   LN     D G      +A+K V+     +  +    ++E++I  L  
Sbjct: 8   LGSGSFGSVYE-GLNL----DDGD----FFAVKEVSLADDGQTGQEAVKQLEQEIALLSK 58

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L HP +          +   I +E   GG L  L  K  +  F     R Y  ++L+ LE
Sbjct: 59  LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLE 116

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           YLH    ++RD+K  N+LV ++G + L+DF +                            
Sbjct: 117 YLHDRNTVHRDIKGANILVDTNGVVKLADFGM---------------------------- 148

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV-ASGGSHG 324
                           +K++               A+S  F G+  +++PEV A  G +G
Sbjct: 149 ----------------AKQVVEF----------SFAKS--FKGSPYWMAPEVIAQQGGYG 180

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
            A D W+ G  + EM  G+ P++       +  I +     P   P  +S+  A+D I  
Sbjct: 181 LAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI--PDHLSD-EAKDFILK 237

Query: 385 LLNKDPCNRLGSKRGAADVKTHPF 408
            L +DP  R      AA++  HPF
Sbjct: 238 CLQRDPSLRP----TAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  104 bits (260), Expect = 8e-25
 Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 11/132 (8%)

Query: 302 RSCSFVGTHEYVSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
           +S   VGT +Y+SPE+        G +G   DWW+ G+ +YEM+YG TPF A S   T  
Sbjct: 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 218

Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
            I+  K+   FP        E  A+DLI  L+   P  RLG + G  D K HPFF+G+++
Sbjct: 219 KIMNHKEHFQFPPDVTDVSEE--AKDLIRRLICS-PETRLG-RNGLQDFKDHPFFEGIDW 274

Query: 415 ALIRSLTPPEIP 426
             IR+ T P +P
Sbjct: 275 DNIRNSTAPYVP 286

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  102 bits (256), Expect = 1e-24
 Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ +  R+ +  GT EY++PEV     H  AVDWWA GI IYEM+ G  PF     +   
Sbjct: 148 AKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPF----FDDNP 203

Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             I +K L    + P  + + +A+DLI  LL  D   RLG+ K GA DVK H +FK +++
Sbjct: 204 FGIYEKILAGKLEFPRHL-DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262

Query: 415 ALI--RSLTPPEIP 426
             +  R L PP +P
Sbjct: 263 DDVPQRKLKPPIVP 276

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 5e-24
 Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 89/325 (27%)

Query: 84  LHRR---IGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           L++R   IG G  G VY        +           + A+K++N +  +       +++
Sbjct: 2   LYQRLELIGRGAYGAVYRGKHVPTGR-----------VVALKIINLDTPDDDV----SDI 46

Query: 139 EKKI-----LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTS 192
           ++++     L+    P +   Y  +       I+ME+  GG + +L    P  +++    
Sbjct: 47  QREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVI 106

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
            R    EVLVAL+Y+H +G+I+RD+K  N+LV + G++ L DF +               
Sbjct: 107 IR----EVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGV--------------- 147

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
              AA     +  R                                      +FVGT  +
Sbjct: 148 ---AALLNQNSSKRS-------------------------------------TFVGTPYW 167

Query: 313 VSPEVASGGSHGNA-VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           ++PEV + G + +   D W+ GI IYEM  G  P+   S+    R ++  P + P +   
Sbjct: 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPY---SDVDAFRAMMLIPKSKPPRLED 224

Query: 372 SMSEYHARDLISGLLNKDPCNRLGS 396
           +      R+ ++  L+++P  RL +
Sbjct: 225 NGYSKLLREFVAACLDEEPKERLSA 249

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  100 bits (249), Expect = 2e-23
 Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 12/158 (7%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+    +G G  G V L          +G +   LYA+K++ K+V+ +   V    +EK
Sbjct: 1   DFNFLMVLGKGSFGKVMLAER-------KGTDE--LYAIKILKKDVVIQDDDVECTMVEK 51

Query: 141 KILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           ++L + D P FL  L++ F+  +    VME+ +GGDL  + H Q   +F    A FYAAE
Sbjct: 52  RVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAE 109

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
           + V L +LH  GIIYRDLK +NV++ S+GHI ++DF +
Sbjct: 110 ISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGM 147

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 98.2 bits (245), Expect = 3e-23
 Identities = 82/335 (24%), Positives = 123/335 (36%), Gaps = 75/335 (22%)

Query: 81  DFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAE 137
           D++L   IG G    VY  +C  NN        E     A+K ++   LEK +  V    
Sbjct: 2   DYELIEVIGVGATAVVYAAICLPNN--------EKV---AIKRID---LEKCQTSVDELR 47

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFY 196
            E + +   +HP +   Y  F   +   +VM + SGG L  + +   P            
Sbjct: 48  KEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATV 107

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             EVL  LEYLH  G I+RD+K  N+L+  DG + ++DF +S                  
Sbjct: 108 LKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSAS---------------- 151

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                        TR  R                              +FVGT  +++PE
Sbjct: 152 ------LADGGDRTRKVRK-----------------------------TFVGTPCWMAPE 176

Query: 317 V-ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMS 374
           V      +    D W+FGI   E+  G  P++  P  +  +  +   P +  T +     
Sbjct: 177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKY 236

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
               R +IS  L KDP  R      A ++  H FF
Sbjct: 237 SKSFRKMISLCLQKDPSKR----PTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 98.3 bits (246), Expect = 3e-23
 Identities = 83/360 (23%), Positives = 125/360 (34%), Gaps = 120/360 (33%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK------ 140
           ++G G  G VY         +  G     + A+K +            R + E+      
Sbjct: 6   KLGEGTYGVVYKA-----RDKKTGE----IVALKKI------------RLDNEEEGIPST 44

Query: 141 -----KILKMLDHPFLPTLYAEFEASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
                 +LK L HP +  L  +   +     +V E+C   DL     K+P    S    +
Sbjct: 45  ALREISLLKELKHPNIVKLL-DVIHTERKLYLVFEYCDM-DLKKYLDKRPGP-LSPNLIK 101

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
               ++L  L Y H   I++RDLKP+N+L+  DG + L+DF L+                
Sbjct: 102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLA---------------- 145

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                  R FG   ++T T                 V T  Y +
Sbjct: 146 -----------------------RAFGI-PLRTYTHE---------------VVTLWYRA 166

Query: 315 PEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNI 358
           PE+  G  H   AVD W+ G    EMI G+  F   S                E +   +
Sbjct: 167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226

Query: 359 VKKP---LTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            K P    TFP   P  + +          DL+S +L  +P  R+ +K  A     HP+F
Sbjct: 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKE-ALK---HPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 97.6 bits (244), Expect = 4e-23
 Identities = 72/314 (22%), Positives = 113/314 (35%), Gaps = 72/314 (22%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKK 141
           L +++G G  G VY  +L  K     G       A+K + ++  E+       E   E +
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGK-----GDGKEVEVAVKTLKEDASEQ----QIEEFLREAR 53

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           I++ LDHP +  L           IVME+  GGDL     K   K  SL+    +A ++ 
Sbjct: 54  IMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIA 113

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
             +EYL     I+RDL   N LV  +  + +SDF LS                     R 
Sbjct: 114 RGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLS---------------------RD 152

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                 Y  +  +                       P+            +++PE    G
Sbjct: 153 LYDDDYYKVKGGKL----------------------PIR-----------WMAPESLKEG 179

Query: 322 SHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHAR 379
              +  D W+FG+ ++E+   G  P+   SN   L  + K   L  P   P  +      
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPPEL-----Y 234

Query: 380 DLISGLLNKDPCNR 393
            L+     +DP +R
Sbjct: 235 KLMLQCWAEDPEDR 248

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 98.2 bits (245), Expect = 1e-22
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 9/126 (7%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKP 362
           S VG+ +Y++PEV  G  +   VD+W+ G  +YE + G  PF+  +   T  N+   K+ 
Sbjct: 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET 216

Query: 363 LTFP--TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL 420
           L  P       ++S+  A DLI+ L+N DP  R GS     D+K HPFFK +++  +R L
Sbjct: 217 LQRPVYDDPRFNLSD-EAWDLITKLIN-DPSRRFGSLE---DIKNHPFFKEVDWNELREL 271

Query: 421 TPPEIP 426
            PP +P
Sbjct: 272 KPPFVP 277

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 96.3 bits (240), Expect = 2e-22
 Identities = 83/321 (25%), Positives = 124/321 (38%), Gaps = 75/321 (23%)

Query: 80  RDFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
            +F + ++IG G    VY  +C L+ +           + A+K V    +   K      
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICLLDGR-----------VVALKKVQIFEMMDAKARQDCL 50

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKR-FSLTSARF 195
            E  +LK LDHP +    A F  +N   IV+E    GDL   ++H +  KR     +   
Sbjct: 51  KEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWK 110

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y  ++  ALE++H   I++RD+KP NV + + G + L D  L                  
Sbjct: 111 YFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLG----------------- 153

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                                 RFF SK                AA   S VGT  Y+SP
Sbjct: 154 ----------------------RFFSSKTT--------------AAH--SLVGTPYYMSP 175

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           E      +    D W+ G  +YEM   ++PF    ++  L ++ KK +      P     
Sbjct: 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKK-IEKCDYPPLPADH 232

Query: 376 YHA--RDLISGLLNKDPCNRL 394
           Y    RDL+S  +N DP  R 
Sbjct: 233 YSEELRDLVSRCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 97.0 bits (241), Expect = 2e-22
 Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 12/158 (7%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+    +G G  G V L        + +G +   LYA+K++ K+V+ +   V    +EK
Sbjct: 1   DFNFLMVLGKGSFGKVMLA-------ERKGTDE--LYAIKILKKDVVIQDDDVECTMVEK 51

Query: 141 KILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           ++L +   P FL  L++ F+  +    VME+ +GGDL  +   Q   RF    A FYAAE
Sbjct: 52  RVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYQIQQVGRFKEPHAVFYAAE 109

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
           + + L +LH  GIIYRDLK +NV++ S+GHI ++DF +
Sbjct: 110 IAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGM 147

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 78/319 (24%), Positives = 121/319 (37%), Gaps = 83/319 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM-E 139
           ++ L   IG G  G VY   LN     + G       A+K ++ E  + K++  ++ M E
Sbjct: 1   NYQLGDLIGRGAFGVVYK-GLN----LETGD----FVAIKQISLE--KIKEEALKSIMQE 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             +LK L HP +       E S+   I++E+   G L  +  K     F  +    Y  +
Sbjct: 50  IDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQ 107

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           VL  L YLH  G+I+RD+K  N+L   DG + L+DF +                      
Sbjct: 108 VLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGV---------------------- 145

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                    +T+L+                         V+    S VGT  +++PEV  
Sbjct: 146 ---------ATKLND------------------------VSKDDASVVGTPYWMAPEVIE 172

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFA--APSNETTLRNIVKK---PLTFPTQSPSSMS 374
                 A D W+ G  + E++ G  P+    P     L  IV+    PL      P  +S
Sbjct: 173 MSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA--ALFRIVQDDHPPL------PEGIS 224

Query: 375 EYHARDLISGLLNKDPCNR 393
               +D +     KDP  R
Sbjct: 225 P-ELKDFLMQCFQKDPNLR 242

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 95.6 bits (238), Expect = 8e-22
 Identities = 60/181 (33%), Positives = 99/181 (54%), Gaps = 12/181 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF++ + IG G  G V +  + N  +         +YAMK++NK  + K+ +      E+
Sbjct: 2   DFEILKVIGRGAFGEVAVVKMKNTGQ---------VYAMKILNKWEMLKRAETACFREER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L   D  ++  L+  F+  N   +VM++  GGDL +L  K    R     ARFY AE+
Sbjct: 53  DVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEM 111

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS--SPEAAS 258
           ++A++ +H LG ++RD+KP+NVL+  +GHI L+DF   L   A   V+S  +  +P+  S
Sbjct: 112 VLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYIS 171

Query: 259 P 259
           P
Sbjct: 172 P 172

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 94.2 bits (235), Expect = 9e-22
 Identities = 80/330 (24%), Positives = 124/330 (37%), Gaps = 78/330 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F L   IG G  G VY  +++ +  Q        + A+KV++ E  E + ++   + E +
Sbjct: 3   FTLLECIGKGSFGEVYK-AIDKRTNQ--------VVAIKVIDLE--EAEDEIEDIQQEIQ 51

Query: 142 ILKMLDHPFLPTLYAEFEASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            L     P++   Y  F        I+ME+C GG   S        +   T   F   EV
Sbjct: 52  FLSQCRSPYITKYYGSF-LKGSKLWIIMEYCGGG---SCLDLLKPGKLDETYIAFILREV 107

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L+ LEYLH  G I+RD+K  N+L+  +G + L+DF +                       
Sbjct: 108 LLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGV----------------------- 144

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                   S +L+             T++    FV            GT  +++PEV   
Sbjct: 145 --------SGQLT------------STMSKRNTFV------------GTPFWMAPEVIKQ 172

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             +    D W+ GI   E+  G  P +       L  I K     P     +      +D
Sbjct: 173 SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN---PPSLEGNKFSKPFKD 229

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            +S  LNKDP  R  +K    ++  H F K
Sbjct: 230 FVSLCLNKDPKERPSAK----ELLKHKFIK 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 94.3 bits (235), Expect = 1e-21
 Identities = 69/301 (22%), Positives = 103/301 (34%), Gaps = 94/301 (31%)

Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E K L+   HP++  L   F   S F  +VME+    DL  +   +          + Y 
Sbjct: 49  EIKALQACQHPYVVKLLDVFPHGSGFV-LVMEYM-PSDLSEVLRDEERP-LPEAQVKSYM 105

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
             +L  + Y+H  GI++RDLKP N+L+ +DG + ++DF L+             S  E  
Sbjct: 106 RMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLA----------RLFSEEEP- 154

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                   R YS +                                   V T  Y +PE+
Sbjct: 155 --------RLYSHQ-----------------------------------VATRWYRAPEL 171

Query: 318 ASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
             G       VD WA G    E++ G   F   ++   L  + +   T  T +  +    
Sbjct: 172 LYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFR---TLGTPNEETWPGL 228

Query: 377 H----------------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
                                        A DL+ GLL  DP  RL     AA+   HP+
Sbjct: 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL----SAAEALRHPY 284

Query: 409 F 409
           F
Sbjct: 285 F 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 95.1 bits (236), Expect = 1e-21
 Identities = 60/181 (33%), Positives = 99/181 (54%), Gaps = 12/181 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF++ + IG G  G V +  + +  R         +YAMK++NK  + K+ +      E+
Sbjct: 2   DFEIIKVIGRGAFGEVAVVKMKHTER---------IYAMKILNKWEMLKRAETACFREER 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L   D  ++ TL+  F+  N+  +VM++  GGDL +L  K    R     ARFY AE+
Sbjct: 53  NVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEM 111

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS--SPEAAS 258
           ++A+  +H L  ++RD+KP+NVL+  +GHI L+DF   L  N    V+S  +  +P+  S
Sbjct: 112 VLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYIS 171

Query: 259 P 259
           P
Sbjct: 172 P 172

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 92.6 bits (231), Expect = 3e-21
 Identities = 70/317 (22%), Positives = 104/317 (32%), Gaps = 78/317 (24%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKK 141
           L +++G G  G VY  +L        G       A+K +     E   +  R E   E  
Sbjct: 3   LGKKLGEGAFGEVYKGTLK-----GDGEGTETKVAVKTLK----EGASEEEREEFLEEAS 53

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YAA 198
           I+K L HP +  L           IV E+  GGDL   LR         LT       A 
Sbjct: 54  IMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK----LTLKDLLQMAL 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   +EYL     ++RDL   N LV  +  + +S  D  L                   
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLVTENLVVKIS--DFGLS------------------ 149

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
            R       Y  R    L                     P+            +++PE  
Sbjct: 150 -RDIYEDDYYRKRGGGKL---------------------PIK-----------WMAPESL 176

Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEY 376
             G   +  D W+FG+ ++E+   G  P+   SNE  L  +     L  P   P  +   
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPDEL--- 233

Query: 377 HARDLISGLLNKDPCNR 393
              +L+      DP +R
Sbjct: 234 --YELMLQCWAYDPEDR 248

Length = 258

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 92.7 bits (230), Expect = 7e-21
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
           + +F GT +Y++PE+     +G +VDWWA G+ +YEM+ G  PF A + +     I+   
Sbjct: 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 212

Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--R 418
           + +PT          A D++   + K+P  RLGS    G   +  HPFFK L++  +  R
Sbjct: 213 VVYPT-----WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRR 267

Query: 419 SLTPPEIP 426
            + PP  P
Sbjct: 268 QIEPPFRP 275

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 90.4 bits (224), Expect = 2e-20
 Identities = 81/329 (24%), Positives = 131/329 (39%), Gaps = 77/329 (23%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L +R+G G  GTVYL        ++R      L  +K +    L   + V  A  E ++L
Sbjct: 4   LQQRLGKGSFGTVYLVKDKKAVAEER------LKVLKEIPVGELNPNETVQ-ANQEAQLL 56

Query: 144 KMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLH-SLRH-KQPHKRFSLTSARFYAAEV 200
             LDHP +   +A F E   F CI+ E+C G DL   L   K   K  S      +  ++
Sbjct: 57  SKLDHPAIVKFHASFLERDAF-CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQL 115

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L+ + Y+H   I++RDLK +N+ ++++  + + DF                         
Sbjct: 116 LLGVHYMHQRRILHRDLKAKNIFLKNN-LLKIGDFG------------------------ 150

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                      +SR L    GS  + T                 +F GT  Y+SPE    
Sbjct: 151 -----------VSRLL---MGSCDLAT-----------------TFTGTPYYMSPEALKH 179

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHAR 379
             + +  D W+ G  +YEM      F   +  + +  IV+ P  + P      ++     
Sbjct: 180 QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNS---- 235

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPF 408
            ++  +LNKDP  R      AA++  +PF
Sbjct: 236 -IMQSMLNKDPSLRP----SAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 90.1 bits (224), Expect = 3e-20
 Identities = 75/352 (21%), Positives = 119/352 (33%), Gaps = 101/352 (28%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
            +IG G  G VY                  + A+K +      +      A  E K+LK 
Sbjct: 5   GKIGEGTYGVVYKARDKLTGE---------IVAIKKIKLRFESEGIPK-TALREIKLLKE 54

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L+HP +  L   F       +V EF        ++ +Q       +  + Y  ++L  L 
Sbjct: 55  LNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRG--LPESLIKSYLYQLLQGLA 112

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           + H  GI++RDLKPEN+L+ ++G + L+DF L+                 +     + YT
Sbjct: 113 FCHSHGILHRDLKPENLLINTEGVLKLADFGLA----------------RSFGSPVRPYT 156

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG-GSHG 324
               TR                                        Y +PE+  G   + 
Sbjct: 157 HYVVTRW---------------------------------------YRAPELLLGDKGYS 177

Query: 325 NAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE------TTLRNIV--- 359
             VD W+ G    E++  R  F                  P  E      +  RN     
Sbjct: 178 TPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237

Query: 360 --KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             K  +  P   P++  +  A DL+S +L+ DP  R+     A     HP+F
Sbjct: 238 PKKAGMPLPKLFPNASPQ--ALDLLSQMLHYDPHKRI----TAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 88.7 bits (220), Expect = 6e-20
 Identities = 75/277 (27%), Positives = 111/277 (40%), Gaps = 64/277 (23%)

Query: 121 VVNKEV--LEKKKKVHRAEM-EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLH 177
           VV KEV      +K  R  + E  IL +L HP +   Y  F   N   I ME+ +GG L+
Sbjct: 28  VVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLY 87

Query: 178 SLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
               +Q  + F      +Y  +++ A+ Y+H  GI++RD+K  N+ +   G I L DF +
Sbjct: 88  DKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGI 147

Query: 238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAE 297
                                                       SK + +         E
Sbjct: 148 --------------------------------------------SKILGS---------E 154

Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
              A +   VGT  Y+SPE+  G  +    D WA G  +YE++  +  F A +N   L  
Sbjct: 155 YSMAETV--VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA-TNPLNLVV 211

Query: 358 -IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            IV+   T P  S  S SE  +  L+  LL +DP  R
Sbjct: 212 KIVQGNYT-PVVSVYS-SELIS--LVHSLLQQDPEKR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 89.7 bits (222), Expect = 1e-19
 Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 18/191 (9%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           RK  +   D+D+ + IG G  G V L  + +K  Q        +YAMK+++K  + K+  
Sbjct: 36  RKLQMKAEDYDVVKVIGRGAFGEVQL--VRHKSSQK-------VYAMKLLSKFEMIKRSD 86

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
                 E+ I+   + P++  L+  F+   +  +VME+  GGDL +L   +  P K    
Sbjct: 87  SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 143

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD--LSLCSNAIPAVE 248
             A+FY AEV++AL+ +H +G+I+RD+KP+N+L+   GH+ L+DF   + +    +   +
Sbjct: 144 --AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCD 201

Query: 249 SPASSPEAASP 259
           +   +P+  SP
Sbjct: 202 TAVGTPDYISP 212

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 74/317 (23%), Positives = 118/317 (37%), Gaps = 79/317 (24%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKK 141
           L +++G G  G VY   L  K    +        A+K + ++  E+       E   E +
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGK--GGKKKVEV---AVKTLKEDASEQ----QIEEFLREAR 53

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YAA 198
           I++ LDHP +  L           IVME+  GGDL S LR  +P     L+ +    +A 
Sbjct: 54  IMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPK----LSLSDLLSFAL 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   +EYL     I+RDL   N LV  +  + +SDF L   S  +              
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGL---SRDLY------------- 153

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                Y R+   +L                         P+            +++PE  
Sbjct: 154 --DDDYYRKRGGKL-------------------------PIR-----------WMAPESL 175

Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEY 376
             G   +  D W+FG+ ++E+   G  P+   SNE  L  +     L  P   P  +   
Sbjct: 176 KEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPPEL--- 232

Query: 377 HARDLISGLLNKDPCNR 393
              DL+     +DP +R
Sbjct: 233 --YDLMLQCWAEDPEDR 247

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 87.6 bits (217), Expect = 1e-19
 Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 77/312 (24%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R +G G  G V+LC         R      L  +K +  E + K ++   A+ E ++LK+
Sbjct: 6   RVVGRGAFGIVHLC---------RRKADQKLVIIKQIPVEQMTKDER-LAAQNECQVLKL 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L HP +   Y  F       IVME+  GG L     K+ +      +   +  ++L+AL 
Sbjct: 56  LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIM---LSDFDLSLCSNAIPAVESPASSPEAASPRSQ 262
           ++H   I++RDLK +N+L+  D H M   + DF +S                +  S +S+
Sbjct: 116 HVHTKLILHRDLKTQNILL--DKHKMVVKIGDFGIS----------------KILSSKSK 157

Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS 322
            YT                                         VGT  Y+SPE+  G  
Sbjct: 158 AYT----------------------------------------VVGTPCYISPELCEGKP 177

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SSMSEYHARDL 381
           +    D WA G  +YE+   +  F A +    L  +V K +   T +P S       R L
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAFEAAN----LPALVLK-IMSGTFAPISDRYSPDLRQL 232

Query: 382 ISGLLNKDPCNR 393
           I  +LN DP  R
Sbjct: 233 ILSMLNLDPSKR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 89.3 bits (221), Expect = 2e-19
 Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 81/365 (22%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           R   +   D+++ + IG G  G V L  + +K  +        +YAMK+++K  + K+  
Sbjct: 36  RDLRMKAEDYEVVKVIGRGAFGEVQL--VRHKSTRK-------VYAMKLLSKFEMIKRSD 86

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
                 E+ I+   + P++  L+  F+   +  +VME+  GGDL +L   +  P K    
Sbjct: 87  SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 143

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD--LSLCSNAIPAVE 248
             ARFY AEV++AL+ +H +G I+RD+KP+N+L+   GH+ L+DF   + +    +   +
Sbjct: 144 --ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 201

Query: 249 SPASSPEAASP---RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
           +   +P+  SP   +SQ     Y      +    F  + +   TP   F A+       S
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP---FYAD-------S 251

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
            VGT+  +        +H N+                                    LTF
Sbjct: 252 LVGTYSKIM-------NHKNS------------------------------------LTF 268

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL--IRSLTPP 423
           P  +  S     A++LI   L  D   RLG + G  ++K H FFK   +A   +R    P
Sbjct: 269 PDDNDISKE---AKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAP 323

Query: 424 EIPGM 428
            +P +
Sbjct: 324 VVPDL 328

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 87.0 bits (215), Expect = 7e-19
 Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 17/130 (13%)

Query: 307 VGTHEYVSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           VGT +Y+SPE+        G +G   DWW+ G+ +YEM+YG TPF A S   T   I+  
Sbjct: 164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223

Query: 362 PLTFPTQSPSSMSEY--HARDLISGLLNKDPCN---RLGSKRGAADVKTHPFFKGLNFAL 416
              F  Q PS +++    A+DLI  L+    C+   RLG + G  D K H FF+G+++  
Sbjct: 224 EERF--QFPSHITDVSEEAKDLIQRLI----CSRERRLG-QNGIEDFKKHAFFEGIDWEN 276

Query: 417 IRSLTPPEIP 426
           IR+L  P IP
Sbjct: 277 IRNLEAPYIP 286

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 85.8 bits (212), Expect = 1e-18
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 8/125 (6%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT +Y++PE+ +   +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  + 
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 219

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLT 421
           +    P SMS+  A  +  GL+ K P  RLG    G  D+K H FF+ +++  +  + + 
Sbjct: 220 Y----PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQ 274

Query: 422 PPEIP 426
           PP  P
Sbjct: 275 PPYKP 279

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 74/329 (22%), Positives = 114/329 (34%), Gaps = 101/329 (30%)

Query: 120 KVVNKEVLEKKKKVHRAEM--------EKKILKMLDHPFLPTLY---AEFEASNFSCIVM 168
           K   + V  KK ++   +         E K+L+ L HP +  L          +   +V 
Sbjct: 21  KKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIY-MVF 79

Query: 169 EFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
           E+    DL  L    P  +F+ +  + Y  ++L  L+YLH  GI++RD+K  N+L+ +DG
Sbjct: 80  EYMDH-DLTGL-LDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG 137

Query: 229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTL 288
            + L+DF L+                                       R +  +     
Sbjct: 138 VLKLADFGLA---------------------------------------RPYTKRNSADY 158

Query: 289 TPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFA 347
           T NR              V T  Y  PE+  G   +G  VD W+ G  + E+  G+  F 
Sbjct: 159 T-NR--------------VITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203

Query: 348 APSNETTLRNI--------------VKKPLTF----PTQS-PSSMSEY-------HARDL 381
             +    L  I              V K   F    P +     + E+        A DL
Sbjct: 204 GSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDL 263

Query: 382 ISGLLNKDPCNRLGSKRG-AADVKTHPFF 409
           +  LL  DP      KR  A     H +F
Sbjct: 264 LDKLLTLDP-----KKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 83.9 bits (208), Expect = 3e-18
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---LRNIVKK 361
           S  GT  Y++PEV     +  AVDWW+ G+  YE + G+ P+   S              
Sbjct: 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA 217

Query: 362 PLTFP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            + +P T S  ++      D I+ LL +DP  RLG      D+K HP+F
Sbjct: 218 DVLYPATWSTEAI------DAINKLLERDPQKRLGDN--LKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 85.0 bits (210), Expect = 3e-18
 Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 8/125 (6%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT +Y++PE+ +   +G +VDWWA+G+ +YEM+ G+ PF     +   ++I++  ++
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 219

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLT 421
           +    P S+S+  A  +  GL+ K P  RLG    G  D++ H FF+ +++  +  R + 
Sbjct: 220 Y----PKSLSK-EAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQ 274

Query: 422 PPEIP 426
           PP  P
Sbjct: 275 PPFKP 279

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 83.9 bits (207), Expect = 3e-18
 Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 76/316 (24%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +++ R +G G  G   L    N  ++         YAMK +          V  +  E 
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQK---------YAMKEIRLPK--SSSAVEDSRKEA 49

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L  + HP +      FEA     IVME+C GGDL      Q  K F   +   +  ++
Sbjct: 50  VLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQM 109

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
            + ++++H   +++RD+K +N+ +  +G + L D                          
Sbjct: 110 CLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGD-------------------------- 143

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FGS ++         +  P A  +C++VGT  YV PE+   
Sbjct: 144 -------------------FGSARL---------LTSPGAY-ACTYVGTPYYVPPEIWEN 174

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---KPLTFPTQSPSSMSEYH 377
             + N  D W+ G  +YE+   + PF A S +  +  + +   KPL      PS  S Y 
Sbjct: 175 MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL------PSHYS-YE 227

Query: 378 ARDLISGLLNKDPCNR 393
            R LI  +  ++P +R
Sbjct: 228 LRSLIKQMFKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 83.5 bits (207), Expect = 5e-18
 Identities = 76/325 (23%), Positives = 120/325 (36%), Gaps = 84/325 (25%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM-- 138
           D+++   IG G  GTV       K R+    +   +   K ++   + +K+K    +   
Sbjct: 1   DYEVLETIGKGSFGTVR------KVRRKSDGK---ILVWKEIDYGNMTEKEK----QQLV 47

Query: 139 -EKKILKMLDHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSA 193
            E  IL+ L HP +   Y      ++    IVME+C GGDL  L  + K+  K       
Sbjct: 48  SEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFI 107

Query: 194 RFYAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
                ++L+AL   H        +++RDLKP N+ + ++ ++ L D              
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGD-------------- 153

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                                          FG  KI  L  +  F          ++VG
Sbjct: 154 -------------------------------FGLAKI--LGHDSSFAK--------TYVG 172

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ 368
           T  Y+SPE  +  S+    D W+ G  IYE+     PF A +       I +    F   
Sbjct: 173 TPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK--FRR- 229

Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
            P   S     ++I  +LN DP  R
Sbjct: 230 IPYRYSS-ELNEVIKSMLNVDPDKR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 82.6 bits (204), Expect = 8e-18
 Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 69/308 (22%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           ++IG G  G   L       +Q         Y +K +N   +  K++   +  E  +L  
Sbjct: 6   KKIGEGSFGKAILVKSKEDGKQ---------YVIKEINISKMSPKER-EESRKEVAVLSN 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + HP +      FE +    IVM++C GGDL+   + Q    F       +  ++ +AL+
Sbjct: 56  MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           ++H   I++RD+K +N+ +  DG I L DF                              
Sbjct: 116 HVHDRKILHRDIKSQNIFLTKDGTIKLGDFG----------------------------- 146

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                 ++R LN         T+   R  +  P             Y+SPE+     + N
Sbjct: 147 ------IARVLN--------STVELARTCIGTPY------------YLSPEICENRPYNN 180

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
             D WA G  +YEM   +  F A +    ++N+V K +       SS   Y  R+L+S L
Sbjct: 181 KSDIWALGCVLYEMCTLKHAFEAGN----MKNLVLKIIRGSYPPVSSHYSYDLRNLVSQL 236

Query: 386 LNKDPCNR 393
             ++P +R
Sbjct: 237 FKRNPRDR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 83.1 bits (205), Expect = 2e-17
 Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 13/128 (10%)

Query: 307 VGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--K 360
           VGT +Y+SPEV       G +G   DWW+ G+F++EM+ G TPF A S   T   I+  K
Sbjct: 204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 263

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG--LNFALIR 418
             L FP     S    HA++LI   L  D   RLG + G  ++K HPFFK    N+  IR
Sbjct: 264 NSLNFPEDVEISK---HAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIR 318

Query: 419 SLTPPEIP 426
               P +P
Sbjct: 319 ETAAPVVP 326

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 15/160 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCL-YAMKVVNKEVLEKKKKVHRAEME 139
           D +    +GAG+ G V              H P     A+K +  E+ E  +K  +   E
Sbjct: 2   DLEYLGELGAGNSGVVSKVL----------HRPTGKIMAVKTIRLEINEAIQK--QILRE 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             IL   + P++   Y  F  +    I ME+  GG L  +  K+   R         A  
Sbjct: 50  LDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL-KEVQGRIPERILGKIAVA 108

Query: 200 VLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           VL  L YLH    II+RD+KP N+LV S G I L DF +S
Sbjct: 109 VLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 4e-17
 Identities = 59/267 (22%), Positives = 96/267 (35%), Gaps = 85/267 (31%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +V E     DL +   K P       + +    ++L  +++LH   I++RDLKP+N+LV 
Sbjct: 83  LVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141

Query: 226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI 285
           SDG + ++DF L                       ++ Y+ + +                
Sbjct: 142 SDGQVKIADFGL-----------------------ARIYSFEMA---------------- 162

Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             LT                 V T  Y +PEV    S+   VD W+ G    E+ + R P
Sbjct: 163 --LTS---------------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL-FRRRP 204

Query: 346 -FAAPSNETTL----------------RNIVKKPLTFPTQSPSSMSEY------HARDLI 382
            F   S    L                RN+     +FP+ +P S   +         DL+
Sbjct: 205 LFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLL 264

Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFF 409
             +L  +P  R+     A +   HP+F
Sbjct: 265 KKMLTFNPHKRI----SAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 81.6 bits (201), Expect = 5e-17
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+ +  GT EY++PE+     HG A DWW  GIFIYE++ G  PF A       
Sbjct: 178 AKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY 237

Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
           + I++  + FP        + + + L+  LL+ D   R G+ K+GA +VK HP+F  +++
Sbjct: 238 QKILEGIIYFP-----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW 292

Length = 340

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 80.7 bits (200), Expect = 5e-17
 Identities = 84/361 (23%), Positives = 129/361 (35%), Gaps = 111/361 (30%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE--ME 139
           + + +++G G  G+VYL                 L A+K +       KKK +  E  M 
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGE---------LVAIKKM-------KKKFYSWEECMN 44

Query: 140 ----KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
               K + K+ +HP +  L   F  ++    V E+  G +L+ L   +  K FS +  R 
Sbjct: 45  LREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRS 103

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
              ++L  L ++H  G  +RDLKPEN+LV     + ++DF L        A E  +  P 
Sbjct: 104 IIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGL--------AREIRSRPP- 154

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                   YT   STR                                        Y +P
Sbjct: 155 --------YTDYVSTRW---------------------------------------YRAP 167

Query: 316 EV--ASGGSHGNAVDWWAFGIFIYEMIYGRTPFA----------------APSNETTLRN 357
           E+   S  S+ + VD WA G  + E+   R  F                  P+ +     
Sbjct: 168 EILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG 226

Query: 358 IV---KKPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
                K    FP  +P+S+ +        A DLI  +L  DP  R      A+    HP+
Sbjct: 227 YKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP----TASQALQHPY 282

Query: 409 F 409
           F
Sbjct: 283 F 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 88/359 (24%), Positives = 122/359 (33%), Gaps = 116/359 (32%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKV-HRAEM-------- 138
           +G G    VY      K R             K   + V  KK K+  R E         
Sbjct: 8   LGEGTYAVVY------KARD------------KETGRIVAIKKIKLGERKEAKDGINFTA 49

Query: 139 --EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E K+L+ L HP +  L   F   +   +V EF    DL  +  K      +    + Y
Sbjct: 50  LREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMET-DLEKVI-KDKSIVLTPADIKSY 107

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
               L  LEYLH   I++RDLKP N+L+ SDG + L+DF L+                  
Sbjct: 108 MLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLA------------------ 149

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                R FGS       PNR    +         V T  Y +PE
Sbjct: 150 ---------------------RSFGS-------PNRKMTHQ---------VVTRWYRAPE 172

Query: 317 VASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNI--------------VK 360
           +  G  H G  VD W+ G    E++  R PF    ++   L  I              V 
Sbjct: 173 LLFGARHYGVGVDMWSVGCIFAELLL-RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231

Query: 361 K---PLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                + F    P+ + +        A DL+  LL  +P  R+     A     HP+F 
Sbjct: 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI----TARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 77.9 bits (192), Expect = 3e-16
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF + +++G G  G+VY     +  +          YA+K V+   + +K++   A  E 
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQ---------FYALKEVDLGSMSQKER-EDAVNEI 50

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--YAA 198
           +IL  ++HP + +    F   N  CIVME+   GDL     K+  KR  +          
Sbjct: 51  RILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++L  L+ LH   I++RDLK  N+L+ ++  + + D  +S
Sbjct: 111 QLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGIS 150

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 77.8 bits (191), Expect = 4e-16
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 73/324 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKV-VNKEVLEKKKKVHRAEMEKKILKML 146
           +G G  G VYLC     Y  D G E   L A +V  + E  E  K+V   E E ++LK L
Sbjct: 10  LGQGAFGRVYLC-----YDVDTGRE---LAAKQVQFDPESPETSKEVSALECEIQLLKNL 61

Query: 147 DHPFLPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
            H  +   Y      A     I ME+  GG +      + +   + +  R Y  ++L  +
Sbjct: 62  QHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKD--QLKAYGALTESVTRKYTRQILEGM 119

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
            YLH   I++RD+K  N+L  S G++ L DF                             
Sbjct: 120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFG---------------------------- 151

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
                            SK++QT+             RS +  GT  ++SPEV SG  +G
Sbjct: 152 ----------------ASKRLQTI------CMSGTGIRSVT--GTPYWMSPEVISGEGYG 187

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
              D W+ G  + EM+  + P+A       +  I  +P T P Q PS +SE HARD +  
Sbjct: 188 RKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-TNP-QLPSHISE-HARDFLGC 244

Query: 385 LLNKDPCNRLGSKRGAADVKTHPF 408
           +  +        +  A ++  HPF
Sbjct: 245 IFVEAR-----HRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 78.7 bits (194), Expect = 5e-16
 Identities = 93/367 (25%), Positives = 148/367 (40%), Gaps = 90/367 (24%)

Query: 51  LSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRG 110
           L L P  SS  + S+  ++        +  + +   RIG+G  GTVY      K      
Sbjct: 45  LPLPPPSSSSSSSSSSSASGSAPSAAKSLSELERVNRIGSGAGGTVY------KVI---- 94

Query: 111 HEPCC-LYAMKVV--NKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
           H P   LYA+KV+  N E    ++++ R   E +IL+ ++HP +   +  F+ +    ++
Sbjct: 95  HRPTGRLYALKVIYGNHED-TVRRQICR---EIEILRDVNHPNVVKCHDMFDHNGEIQVL 150

Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
           +EF  GG L         ++F    AR    ++L  + YLH   I++RD+KP N+L+ S 
Sbjct: 151 LEFMDGGSLEG--THIADEQFLADVAR----QILSGIAYLHRRHIVHRDIKPSNLLINSA 204

Query: 228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQT 287
            ++ ++DF                                    +SR L         QT
Sbjct: 205 KNVKIADFG-----------------------------------VSRILA--------QT 221

Query: 288 LTPNRLFVAEPVAARSC-SFVGTHEYVSPE-----VASGGSHGNAVDWWAFGIFIYEMIY 341
           + P             C S VGT  Y+SPE     +  G   G A D W+ G+ I E   
Sbjct: 222 MDP-------------CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL 268

Query: 342 GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA 401
           GR PF           +    ++ P ++P++ S    R  IS  L ++P  R      A 
Sbjct: 269 GRFPFGVGRQGDWASLMCAICMSQPPEAPATASR-EFRHFISCCLQREPAKR----WSAM 323

Query: 402 DVKTHPF 408
            +  HPF
Sbjct: 324 QLLQHPF 330

Length = 353

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 21/163 (12%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK--KIL 143
           +++G G  G VY   L  K             A+K + ++  E+++K    +  K  +++
Sbjct: 1   KKLGEGAFGEVYKGKLKGK------DGKTTEVAVKTLKEDASEEERK----DFLKEARVM 50

Query: 144 KMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF----SLTSARF-- 195
           K L HP +  L     E      +V+E+  GGDL   LR  +P        +L+      
Sbjct: 51  KKLGHPNVVRLLGVCTEEEPL-YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +A ++   +EYL     ++RDL   N LV  D  + +SDF LS
Sbjct: 110 FAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLS 152

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 18/151 (11%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  G VY        R   G E     A+K +    L K+ K      E  I+K  
Sbjct: 26  KIGEGASGEVYKA----TDRAT-GKE----VAIKKMR---LRKQNK-ELIINEILIMKDC 72

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR--FYAAEVLVAL 204
            HP +   Y  +   +   +VME+  GG L  +          +   +  +   EVL  L
Sbjct: 73  KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIIT---QNFVRMNEPQIAYVCREVLQGL 129

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           EYLH   +I+RD+K +N+L+  DG + L+DF
Sbjct: 130 EYLHSQNVIHRDIKSDNILLSKDGSVKLADF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 75.8 bits (186), Expect = 2e-15
 Identities = 83/321 (25%), Positives = 129/321 (40%), Gaps = 79/321 (24%)

Query: 81  DFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           +F + ++IG G    VY   C L+          P  L  +++   ++++ K    RA+ 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLD--------GVPVALKKVQIF--DLMDAKA---RADC 49

Query: 139 EKKI--LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARF 195
            K+I  LK L+HP +   YA F   N   IV+E    GDL  + +H +  KR       +
Sbjct: 50  IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVW 109

Query: 196 -YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
            Y  ++  ALE++H   +++RD+KP NV + + G + L D  L                 
Sbjct: 110 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG---------------- 153

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                  RFF SK                AA   S VGT  Y+S
Sbjct: 154 -----------------------RFFSSKT--------------TAAH--SLVGTPYYMS 174

Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--PLTFPTQSPSS 372
           PE      +    D W+ G  +YEM   ++PF    ++  L ++ KK     +P   PS 
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPL-PSD 231

Query: 373 MSEYHARDLISGLLNKDPCNR 393
                 R L++  +N DP  R
Sbjct: 232 HYSEELRQLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 75.4 bits (185), Expect = 2e-15
 Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 75/319 (23%)

Query: 81  DFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           +F + ++IG G    VY   C L+ K        P  L  +++   E+++ K +      
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRK--------PVALKKVQIF--EMMDAKAR-QDCVK 51

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARF-Y 196
           E  +LK L+HP +      F   N   IV+E    GDL  + ++ +  KR       + Y
Sbjct: 52  EIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKY 111

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             ++  A+E++H   +++RD+KP NV + + G + L D  L                   
Sbjct: 112 FVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG------------------ 153

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                RFF SK                AA   S VGT  Y+SPE
Sbjct: 154 ---------------------RFFSSKT--------------TAAH--SLVGTPYYMSPE 176

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--PLTFPTQSPSSMS 374
                 +    D W+ G  +YEM   ++PF    ++  L ++ +K     +P       S
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFY--GDKMNLFSLCQKIEQCDYPPLPTEHYS 234

Query: 375 EYHARDLISGLLNKDPCNR 393
           E   R+L+S  +  DP  R
Sbjct: 235 E-KLRELVSMCIYPDPDQR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 81  DFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVV--NKEVLEKKKKVHRA 136
            FD+  ++G G  G+VY  +     +             A+KVV   +++ E  K     
Sbjct: 4   VFDILEKLGEGSYGSVYKAIHKETGQV-----------VAIKVVPVEEDLQEIIK----- 47

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG---DLHSLRHKQPHKRFSLTSA 193
             E  ILK  D P++   Y  +  +    IVME+C  G   D+  + +K      +LT  
Sbjct: 48  --EISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK------TLTEE 99

Query: 194 RFYA--AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              A   + L  LEYLH    I+RD+K  N+L+  +G   L+DF +S
Sbjct: 100 EIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 75.7 bits (186), Expect = 3e-15
 Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 82/327 (25%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  GTVY            G E     A+K +N   L+++ K      E  +++  
Sbjct: 26  KIGQGASGTVYTAI-----DVATGQE----VAIKQMN---LQQQPKKELIINEILVMREN 73

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            HP +      +   +   +VME+ +GG L  +  +       + +      E L ALE+
Sbjct: 74  KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEF 130

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH   +I+RD+K +N+L+  DG + L+DF    C+                         
Sbjct: 131 LHSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCA------------------------- 163

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                +TP +        ++  + VGT  +++PEV +  ++G  
Sbjct: 164 --------------------QITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPK 195

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI--VKKPLTFPTQSPSSMSEYHARDLISG 384
           VD W+ GI   EM+ G  P+    NE  LR +  +    T   Q+P  +S    RD ++ 
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNR 251

Query: 385 LLNKDPCNRLGSKRGAA-DVKTHPFFK 410
            L  D       KRG+A ++  HPF K
Sbjct: 252 CLEMDV-----EKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 75.5 bits (185), Expect = 4e-15
 Identities = 77/302 (25%), Positives = 117/302 (38%), Gaps = 70/302 (23%)

Query: 115 CLYAMKVVNKEVLEKK---KKVHRAEM---EKKILKMLDHPFLPTLYAEFEASNFSCIVM 168
           C+   K   K+V  KK   +K  R E+   E  I++   H  +  +Y  +   +   +VM
Sbjct: 39  CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98

Query: 169 EFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
           EF  GG L  +     H R +          VL AL YLH  G+I+RD+K +++L+ SDG
Sbjct: 99  EFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG 155

Query: 229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTL 288
            I LS  D   C+                                               
Sbjct: 156 RIKLS--DFGFCAQ---------------------------------------------- 167

Query: 289 TPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA 348
                 V++ V  R  S VGT  +++PEV S   +G  VD W+ GI + EMI G  P+  
Sbjct: 168 ------VSKEVPKRK-SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF- 219

Query: 349 PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
             NE  L+ + +     P   P     +    ++ G L+         +  A ++  HPF
Sbjct: 220 --NEPPLQAMRRIRDNLP---PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274

Query: 409 FK 410
            K
Sbjct: 275 LK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 81/331 (24%), Positives = 127/331 (38%), Gaps = 88/331 (26%)

Query: 115 CLYAMKVVNKEVLEKK---KKVHRAEM---EKKILKMLDHPFLPTLYAEFEASNFSCIVM 168
           C+  +K   K V  KK   +K  R E+   E  I++   H  +  +Y  +   +   +VM
Sbjct: 37  CIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 96

Query: 169 EFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
           EF  GG L  +     H R +          VL AL  LH  G+I+RD+K +++L+  DG
Sbjct: 97  EFLEGGALTDI---VTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG 153

Query: 229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTL 288
            + LSDF    C+                                        SK++   
Sbjct: 154 RVKLSDF--GFCAQV--------------------------------------SKEVP-- 171

Query: 289 TPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA 348
                        R  S VGT  +++PE+ S   +G  VD W+ GI + EM+ G  P+  
Sbjct: 172 -------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF- 217

Query: 349 PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN----KDPCNRLGSKRGAADVK 404
             NE  L+ +       P   P   + +     + G L+    +DP  R      AA++ 
Sbjct: 218 --NEPPLKAMKMIRDNLP---PKLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELL 268

Query: 405 THPFFKGLNFALIRSLTPPE--IPGMRRQKT 433
            HPF        +    PP   +P MR+ + 
Sbjct: 269 KHPF--------LAKAGPPSCIVPLMRQNRM 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 6e-15
 Identities = 68/311 (21%), Positives = 101/311 (32%), Gaps = 89/311 (28%)

Query: 128 EKKKKVHRAEM-EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
           E  + V +  + E K+L+ L H  +  L   F       +V E+     L  L    P  
Sbjct: 38  EDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASP-G 95

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
                + R Y  ++L A+ Y H   II+RD+KPEN+LV   G + L DF  +        
Sbjct: 96  GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFA-------- 147

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                          R   ++    LT                +
Sbjct: 148 -------------------------------RALRARPASPLT---------------DY 161

Query: 307 VGTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-------------- 351
           V T  Y +PE+  G  ++G  VD WA G  + E++ G   F   S+              
Sbjct: 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPL 221

Query: 352 -----ETTLRNIVKKPLTFPTQS--------PSSMSEYHARDLISGLLNKDPCNRLGSKR 398
                E    N     + FP  S                A D +   L  DP  RL    
Sbjct: 222 PPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL---- 277

Query: 399 GAADVKTHPFF 409
              ++  HP+F
Sbjct: 278 TCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 78/336 (23%), Positives = 127/336 (37%), Gaps = 78/336 (23%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  G V +    +  RQ          A+K+++   L K+++      E  I++  
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQ---------VAVKMMD---LRKQQRRELLFNEVVIMRDY 75

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            H  +  +Y  +       ++MEF  GG L  +  +    R +          VL AL Y
Sbjct: 76  QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCY 132

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH  G+I+RD+K +++L+  DG + LS  D   C+                         
Sbjct: 133 LHSQGVIHRDIKSDSILLTLDGRVKLS--DFGFCA------------------------- 165

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                            +I    P R            S VGT  +++PEV S   +G  
Sbjct: 166 -----------------QISKDVPKRK-----------SLVGTPYWMAPEVISRTPYGTE 197

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
           VD W+ GI + EM+ G  P+ + S    ++ +   P   P    +       RD +  +L
Sbjct: 198 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP--PKLKNAHKISPVLRDFLERML 255

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
            ++P  R      A ++  HPF   L   L   L P
Sbjct: 256 TREPQER----ATAQELLDHPFL--LQTGLPECLVP 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 74.4 bits (182), Expect = 8e-15
 Identities = 89/346 (25%), Positives = 139/346 (40%), Gaps = 84/346 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +  + +IG G  GTV+            G E     A+K +N   L+K+ K      E
Sbjct: 19  KKYTRYEKIGQGASGTVFTAI-----DVATGQE----VAIKQIN---LQKQPKKELIINE 66

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             ++K L +P +      F   +   +VME+ +GG L  +  +       + +      E
Sbjct: 67  ILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRE 123

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
            L ALE+LH   +I+RD+K +NVL+  DG + L+DF    C+   P            S 
Sbjct: 124 CLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDF--GFCAQITP----------EQSK 171

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
           RS                                           + VGT  +++PEV +
Sbjct: 172 RS-------------------------------------------TMVGTPYWMAPEVVT 188

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYH 377
             ++G  VD W+ GI   EM+ G  P+    NE  LR   ++    T   Q+P  +S   
Sbjct: 189 RKAYGPKVDIWSLGIMAIEMVEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSPIF 245

Query: 378 ARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFKGLNFALIRSLTP 422
            RD ++  L  D       KRG+A ++  HPF K      + SLTP
Sbjct: 246 -RDFLNRCLEMDV-----EKRGSAKELLQHPFLKLAK--PLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 8e-15
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 13/158 (8%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D++L +RIG+G  G VY      K R     E   L A+KV+    LE        + E 
Sbjct: 4   DYELIQRIGSGTYGDVY------KARDIATGE---LVAIKVIK---LEPGDDFEIIQQEI 51

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +LK   HP +   +  +   +   IVME+C GG L  +          L  A +   E 
Sbjct: 52  SMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIA-YVCRET 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           L  L YLH  G I+RD+K  N+L+  DG + L+DF +S
Sbjct: 111 LKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 74.3 bits (182), Expect = 8e-15
 Identities = 86/335 (25%), Positives = 132/335 (39%), Gaps = 87/335 (25%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV---NKEVLEKKKKVHRAEMEKKILK 144
           +G G  G VY         + +  E   L A KV+   ++E LE     +  E+E  IL 
Sbjct: 20  LGDGAFGKVY---------KAKNKETGALAAAKVIETKSEEELED----YMVEIE--ILA 64

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
             +HP++  L   F       I++EFC GG + ++   +  +  +    +    ++L AL
Sbjct: 65  TCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVICRQMLEAL 123

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           +YLH + II+RDLK  NVL+  DG I L+DF +S                          
Sbjct: 124 QYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVS-------------------------- 157

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
                            +K ++TL             R  SF+GT  +++PEV    +  
Sbjct: 158 -----------------AKNVKTLQ------------RRDSFIGTPYWMAPEVVMCETMK 188

Query: 325 NA-----VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHA 378
           +       D W+ GI + EM     P    +    L  I K +P T    S  SM E+  
Sbjct: 189 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSM-EFR- 246

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
            D +   L+K P  R      AA +  HPF   + 
Sbjct: 247 -DFLKTALDKHPETR----PSAAQLLEHPFVSSVT 276

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 19/159 (11%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN-KEVLEKKKKVHRAEMEKKILK 144
            R+G G  G+V  C L N            ++A+K +      + +K++ R   E +I K
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGM---------IFALKTITTDPNPDLQKQILR---ELEINK 54

Query: 145 MLDHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY---AAE 199
               P++   Y  F  E+S+   I ME+C GG L S+ +K+  KR      +     A  
Sbjct: 55  SCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSI-YKKVKKRGGRIGEKVLGKIAES 113

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           VL  L YLH   II+RD+KP N+L+   G + L DF +S
Sbjct: 114 VLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS 152

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 73.3 bits (180), Expect = 1e-14
 Identities = 82/328 (25%), Positives = 129/328 (39%), Gaps = 76/328 (23%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMK-VVNKEVLEKKKKVHRA-----EMEKK 141
           IG+G  G+VYL  +N    +        L A+K V    V    K   R+       E  
Sbjct: 8   IGSGSFGSVYL-GMNASSGE--------LMAVKQVELPSVSASSKDRKRSMLDALAREIA 58

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           +LK L H  +         ++   I +E+  GG + +L +   +  F  T  R +  ++L
Sbjct: 59  LLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQIL 116

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
             L YLH  GII+RD+K  N+LV + G I +SDF +                        
Sbjct: 117 KGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGI------------------------ 152

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQ-TLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                               SKK++      +   A P      S  G+  +++PEV   
Sbjct: 153 --------------------SKKLEANSLSTKTNGARP------SLQGSVFWMAPEVVKQ 186

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S+    D W+ G  + EM+ G+ PF    + T L+ I K       + PS++S   A D
Sbjct: 187 TSYTRKADIWSLGCLVVEMLTGKHPFP---DCTQLQAIFKIGENASPEIPSNISS-EAID 242

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPF 408
            +      D  N+   +  AA++  HPF
Sbjct: 243 FLEKTFEID-HNK---RPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 74.9 bits (184), Expect = 2e-14
 Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 6/120 (5%)

Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           +GT +Y++PE+  G  HG AVDWWA G+ ++E + G  PF   + +   +NI+ + + +P
Sbjct: 541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            +    +S  +A++ I  LL  DP  R G K    ++K HP F G+++  +++ T P IP
Sbjct: 601 -EGEEKLSV-NAQNAIEILLTMDPTKRAGLK----ELKQHPLFHGVDWENLQNQTMPFIP 654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 86/344 (25%), Positives = 128/344 (37%), Gaps = 92/344 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            F+L   IG G  G VY  + + K  Q        L A+K+++    E++      + E 
Sbjct: 7   IFELVEVIGEGTYGKVYK-ARHKKTGQ--------LVAIKIMDIIEDEEE----EIKEEY 53

Query: 141 KILKML-DHPFLPTLYAEFEASNFSC------IVMEFCSGG---DLHSLRHKQPHKRFSL 190
            IL+   +HP + T Y  F   N         +VME C GG   DL     K+  KR   
Sbjct: 54  NILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKG-KRLKE 112

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
               +   E L  L YLH   +I+RD+K +N+L+  +  + L DF +S            
Sbjct: 113 EWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS------------ 160

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                           Q  + L R  N F G       TP                    
Sbjct: 161 ---------------AQLDSTLGR-RNTFIG-------TPY------------------- 178

Query: 311 EYVSPEVAS-----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
            +++PEV +       S+    D W+ GI   E+  G+ P         L  I + P   
Sbjct: 179 -WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP-- 235

Query: 366 PT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
           PT +SP + S+    D IS  L K+   R   +    ++  HPF
Sbjct: 236 PTLKSPENWSKKF-NDFISECLIKNYEQRPFME----ELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 72.4 bits (178), Expect = 3e-14
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 18/166 (10%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
            R     +++G G  G V LC  +     D   E     A+K +N    E+    HR++ 
Sbjct: 3   KRHLKFIKQLGEGHFGKVELCRYDPL--GDNTGE---QVAVKSLNHSGEEQ----HRSDF 53

Query: 139 EKKI--LKMLDHPFLPTL--YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           E++I  L+ LDH  +       E        ++ME+   G   SLR      R  +   R
Sbjct: 54  EREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSG---SLRDYLQRHRDQINLKR 110

Query: 195 F--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              +++++   ++YL     I+RDL   N+LV S+  + +SDF L+
Sbjct: 111 LLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA 156

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 72.0 bits (176), Expect = 4e-14
 Identities = 78/306 (25%), Positives = 120/306 (39%), Gaps = 70/306 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV--NKEVLEKKKKVHRAEM 138
           ++ L + +G G  G VYLC     Y  D G E     A+K V  + E  E  K+V+  E 
Sbjct: 3   NWRLGKLLGQGAFGRVYLC-----YDADTGRE----LAVKQVQFDPESPETSKEVNALEC 53

Query: 139 EKKILKMLDHPFLPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E ++LK L H  +   Y            I ME   GG +      + +   +    R Y
Sbjct: 54  EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKD--QLKSYGALTENVTRKY 111

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             ++L  + YLH   I++RD+K  N+L  S G++ L DF                     
Sbjct: 112 TRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG-------------------- 151

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                    SK++QT+  +   +         S  GT  ++SPE
Sbjct: 152 ------------------------ASKRLQTICLSGTGMK--------SVTGTPYWMSPE 179

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V SG  +G   D W+ G  + EM+  + P+A       +  I  +P T P   P  +S+ 
Sbjct: 180 VISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-TNP-VLPPHVSD- 236

Query: 377 HARDLI 382
           H RD +
Sbjct: 237 HCRDFL 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 72.0 bits (177), Expect = 7e-14
 Identities = 85/375 (22%), Positives = 133/375 (35%), Gaps = 121/375 (32%)

Query: 82  FDLH------RRIGAGDIGTVYLCS-LNNKYRQDRGHEPCCLYAMKVVNK--EVLEKKKK 132
           FD+         IG+G  G V  CS ++ +  +          A+K +    +V    K+
Sbjct: 1   FDVGSRYKPIENIGSGAYGVV--CSAIDTRSGKK--------VAIKKIPHAFDVPTLAKR 50

Query: 133 VHRAEMEKKILKMLDHP--------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQ 183
             R   E KIL+   H           P   A+F+       +ME     DLH + H  Q
Sbjct: 51  TLR---ELKILRHFKHDNIIAIRDILRPPG-ADFKDVYVVMDLME----SDLHHIIHSDQ 102

Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
           P    +    R++  ++L  L+Y+H   +I+RDLKP N+LV  D  + + DF ++     
Sbjct: 103 P---LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL-- 157

Query: 244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                  +SSP       + +  +Y                                   
Sbjct: 158 -------SSSPT----EHKYFMTEY----------------------------------- 171

Query: 304 CSFVGTHEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPF---------------- 346
              V T  Y +PE+  S   +  A+D W+ G    EM+  R  F                
Sbjct: 172 ---VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVL 228

Query: 347 AAPSNETTLR---NIVKKPLT-FPTQSPSSMSEY------HARDLISGLLNKDPCNRLGS 396
            +PS E   R   + V+K +   P + P   S+        A DL+S +L  DP  R+  
Sbjct: 229 GSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI-- 286

Query: 397 KRGAADVKTHPFFKG 411
                    HPF   
Sbjct: 287 --TVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 72.7 bits (178), Expect = 9e-14
 Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 72/292 (24%)

Query: 109 RGHEPCCLYAMKVVNKEV-LEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
           RG +P      KVV K V L  +++   A  E   L   DH  +   + +F++ +   ++
Sbjct: 88  RGSDP----KEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143

Query: 168 MEFCSGGDLHS-----LRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
           ME+ SGGDL+      L+   P + + +    FY  ++++AL+ +H   +++RDLK  N+
Sbjct: 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEV-GLLFY--QIVLALDEVHSRKMMHRDLKSANI 200

Query: 223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGS 282
            +   G I L DF  S                           +QYS  +S         
Sbjct: 201 FLMPTGIIKLGDFGFS---------------------------KQYSDSVS--------- 224

Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
                     L VA        SF GT  Y++PE+     +    D W+ G+ +YE++  
Sbjct: 225 ----------LDVAS-------SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTL 267

Query: 343 RTPFAAPSNETTLRNIV-KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             PF  PS    ++ ++  K   FP    S M     + L+  LL+K+P  R
Sbjct: 268 HRPFKGPSQREIMQQVLYGKYDPFPCPVSSGM-----KALLDPLLSKNPALR 314

Length = 478

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 79/327 (24%), Positives = 119/327 (36%), Gaps = 81/327 (24%)

Query: 88  IGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KM 145
           +G G  G VY    L+ + R              +  KE+ E+  +  +   E+  L   
Sbjct: 16  LGKGTYGIVYAARDLSTQVR--------------IAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLVAL 204
           L H  +         + F  I ME   GG L +L R K    + +  +  FY  ++L  L
Sbjct: 62  LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGL 121

Query: 205 EYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           +YLH   I++RD+K +NVLV +  G + +SDF                            
Sbjct: 122 KYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGT-------------------------- 155

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-- 321
                             SK++  + P      E       +F GT +Y++PEV   G  
Sbjct: 156 ------------------SKRLAGINP----CTE-------TFTGTLQYMAPEVIDKGPR 186

Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL 381
            +G   D W+ G  I EM  G+ PF            V      P + P S+S   A++ 
Sbjct: 187 GYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP-EIPESLSA-EAKNF 244

Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPF 408
           I      DP  R      A D+   PF
Sbjct: 245 ILRCFEPDPDKR----ASAHDLLQDPF 267

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 63/196 (32%), Positives = 88/196 (44%), Gaps = 32/196 (16%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV--NKEVLEKKK-------KVHRAEM 138
           IG G  G VYL  LN       G     + A+K V     +  +         K  R+E+
Sbjct: 9   IGKGTYGRVYLA-LN----VTTGE----MMAVKQVELPATIAGRHDSRQKDMVKALRSEI 59

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFS-CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E   LK LDH  +   Y  FE +     I +E+  GG + S      + RF     RF+ 
Sbjct: 60  E--TLKDLDHLNIVQ-YLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFT 114

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS----- 252
            +VL  L YLH  GI++RDLK +N+LV +DG   +SDF +S  S+ I   +   S     
Sbjct: 115 EQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSV 174

Query: 253 ---SPEAASPRSQTYT 265
              +PE     SQ Y+
Sbjct: 175 FWMAPEVIHSYSQGYS 190

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 70.0 bits (171), Expect = 2e-13
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +++ ++IG G  G +YL     K + D  H          V KE+   K  V   E  KK
Sbjct: 2   YEIIKKIGEGSFGKIYLA----KAKSDSEH---------CVIKEIDLTKMPVKEKEASKK 48

Query: 142 ---ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
              +L  + HP + T +A F+ +    IVME+C GGDL    ++Q    FS      +  
Sbjct: 49  EVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFV 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS-LCSNAIPAVESPASSPEA 256
           ++ + L+++H   I++RD+K +N+ +  +G +  L DF ++   ++++    +   +P  
Sbjct: 109 QISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYY 168

Query: 257 ASP 259
            SP
Sbjct: 169 LSP 171

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 70.6 bits (174), Expect = 2e-13
 Identities = 85/378 (22%), Positives = 131/378 (34%), Gaps = 131/378 (34%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK--EVLEKKKKVHRAEME 139
           ++L + IG+G  G V          +  G +     A+K ++   + L   K++ R   E
Sbjct: 2   YELLKPIGSGAYGVVCSA-----VDKRTGRK----VAIKKISNVFDDLIDAKRILR---E 49

Query: 140 KKILKMLDHP--------FLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSL 190
            K+L+ L H           P    +F       IV E     DLH  ++  QP     L
Sbjct: 50  IKLLRHLRHENIIGLLDILRPPSPEDFNDVY---IVTEL-METDLHKVIKSPQP-----L 100

Query: 191 TSA--RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           T    +++  ++L  L+YLH   +I+RDLKP N+LV S       + DL +C        
Sbjct: 101 TDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS-------NCDLKICD------- 146

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFV 307
                                          FG ++ +      + F+ E V  R     
Sbjct: 147 -------------------------------FGLARGVDPDEDEKGFLTEYVVTRW---- 171

Query: 308 GTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV------- 359
               Y +PE+    S    A+D W+ G    E++  +  F        L  IV       
Sbjct: 172 ----YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPS 227

Query: 360 -----------------------KKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
                                  KKPL+  FP  SP       A DL+  +L  DP  R+
Sbjct: 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPE------AIDLLEKMLVFDPKKRI 281

Query: 395 GSKRGAADVKTHPFFKGL 412
                A +   HP+   L
Sbjct: 282 ----TADEALAHPYLAQL 295

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+L +RIG+G  G VY      K R     E   L A+KV+    LE  +     + E 
Sbjct: 10  DFELIQRIGSGTYGDVY------KARNVNTGE---LAAIKVIK---LEPGEDFAVVQQEI 57

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K   H  +   +  +   +   I MEFC GG L  + H       S +   + + E 
Sbjct: 58  IMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRET 115

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           L  L YLH  G ++RD+K  N+L+  +GH+ L+DF +S
Sbjct: 116 LQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 68.7 bits (168), Expect = 5e-13
 Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 62/275 (22%)

Query: 139 EKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E +++  L+HP +  +  A  E S+F+ + +E+ +GG +  L  K  +  F       Y 
Sbjct: 53  EIRLMARLNHPHIIRMLGATCEDSHFN-LFVEWMAGGSVSHLLSK--YGAFKEAVIINYT 109

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLSLCSNAIPAVESPASSPEA 256
            ++L  L YLH   II+RD+K  N+L+ S G  + ++DF                    A
Sbjct: 110 EQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFG------------------AA 151

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
           A   ++       T    F  +  G                           T  +++PE
Sbjct: 152 ARLAAKG------TGAGEFQGQLLG---------------------------TIAFMAPE 178

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSE 375
           V  G  +G + D W+ G  I EM   + P+ A  +   L  I K    T     P  +S 
Sbjct: 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSP 238

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
              RD+    L   P +R  S+    ++  HP F+
Sbjct: 239 -GLRDVTLRCLELQPEDRPPSR----ELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 69.1 bits (170), Expect = 6e-13
 Identities = 81/335 (24%), Positives = 120/335 (35%), Gaps = 112/335 (33%)

Query: 147 DHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHS-LRH---KQPHKRFSLTSARFYAAEVL 201
           DHP +  L    +A N   I + F     DLH+ +R    +  HKR+       Y  ++L
Sbjct: 65  DHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDVHKRYI-----MY--QLL 117

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
            AL+Y+H   +I+RDLKP N+L+ SD  + L+DF                          
Sbjct: 118 KALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG------------------------- 152

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                     L+R L+    + +   LT                +V T  Y +PE+  G 
Sbjct: 153 ----------LARSLSELEENPENPVLT---------------DYVATRWYRAPEILLGS 187

Query: 322 SHGN-AVDWWAFGIFIYEMIYGRTPFA----------------APSNE-----------T 353
           +     VD W+ G  + EM+ G+  F                  PS E           T
Sbjct: 188 TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAAT 247

Query: 354 TLRNIV---KKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
            L ++    +KPL    P  S        A DL+  LL  +P  RL     A +   HP+
Sbjct: 248 MLDSLPSRPRKPLDELLPKASDD------ALDLLKKLLVFNPNKRL----TAEEALEHPY 297

Query: 409 FKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKS 443
                F       P + P +    T+P  D    S
Sbjct: 298 VA--QFH-----NPSDEPVLPYPITIPLDDNVKLS 325

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 68.6 bits (167), Expect = 8e-13
 Identities = 83/338 (24%), Positives = 138/338 (40%), Gaps = 82/338 (24%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  GTVY  +++    Q+         A+K +N   L+++ K      E  +++  
Sbjct: 26  KIGQGASGTVY-TAIDIATGQE--------VAIKQMN---LQQQPKKELIINEILVMREN 73

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            +P +      +   +   +VME+ +GG L  +  +       + +      E L AL++
Sbjct: 74  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALDF 130

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH   +I+RD+K +N+L+  DG + L+DF    C+   P            S RS     
Sbjct: 131 LHSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITP----------EQSKRS----- 173

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                                                 + VGT  +++PEV +  ++G  
Sbjct: 174 --------------------------------------TMVGTPYWMAPEVVTRKAYGPK 195

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISG 384
           VD W+ GI   EM+ G  P+    NE  LR   ++    T   Q+P  +S    RD ++ 
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYL---NENPLRALYLIATNGTPELQNPERLSAVF-RDFLNR 251

Query: 385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
            L  D  +R GS   A ++  HPF K      + SLTP
Sbjct: 252 CLEMD-VDRRGS---AKELLQHPFLKLAK--PLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 67.5 bits (166), Expect = 1e-12
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           + VGT  Y+SPE+     +    D W+ G  +YE+   + PF   +       I+K    
Sbjct: 162 TVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP 221

Query: 365 -FPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             P+Q  S +     R+L+S LL KDP  R
Sbjct: 222 PIPSQYSSEL-----RNLVSSLLQKDPEER 246

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 88/349 (25%), Positives = 127/349 (36%), Gaps = 97/349 (27%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  G VY      K R     E   + A+K +  +  E +     A  E  +LK L
Sbjct: 7   KIGEGTYGVVY------KARNKLTGE---VVALKKIRLD-TETEGVPSTAIREISLLKEL 56

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
           +HP +  L       N   +V EF    DL       P     L   + Y  ++L  L +
Sbjct: 57  NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAF 115

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
            H   +++RDLKP+N+L+ ++G I L+DF L+                            
Sbjct: 116 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---------------------------- 147

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGN 325
                      R FG        P R +  E V         T  Y +PE+  G   +  
Sbjct: 148 -----------RAFG-------VPVRTYTHEVV---------TLWYRAPEILLGCKYYST 180

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-------------------KPLTFP 366
           AVD W+ G    EM+  R  F   S    L  I +                   KP +FP
Sbjct: 181 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP-SFP 239

Query: 367 TQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             +    S+         RDL+S +L+ DP  R+ +K   A    HPFF
Sbjct: 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA----HPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 72/260 (27%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+RD+K +N+L+ 
Sbjct: 94  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150

Query: 226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+DF    C+   P            S RS                        
Sbjct: 151 MDGSVKLTDF--GFCAQITP----------EQSKRST----------------------- 175

Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
                                VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 176 --------------------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L+ D       KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLDMDV-----EKRGSAKE 266

Query: 403 VKTHPFFKGLNFALIRSLTP 422
           +  H F K      + SLTP
Sbjct: 267 LLQHQFLKIAK--PLSSLTP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 81/341 (23%), Positives = 122/341 (35%), Gaps = 98/341 (28%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAE 137
             D   +IG G  G V                  C+   K   ++V  KK   +K  R E
Sbjct: 20  YLDNFVKIGEGSTGIV------------------CIATDKSTGRQVAVKKMDLRKQQRRE 61

Query: 138 M---EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +   E  I++   HP +  +Y+ +   +   +VMEF  GG   +L     H R +     
Sbjct: 62  LLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIA 118

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
                VL AL +LH  G+I+RD       ++SD  I+L                      
Sbjct: 119 TVCLAVLKALSFLHAQGVIHRD-------IKSDS-ILL---------------------- 148

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                     T     +LS F   F               V++ V  R  S VGT  +++
Sbjct: 149 ----------TSDGRVKLSDF--GFCAQ------------VSKEVPRRK-SLVGTPYWMA 183

Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
           PEV S   +G  VD W+ GI + EM+ G  P+        ++ I           P  + 
Sbjct: 184 PEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-------PPKLK 236

Query: 375 EYHA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             H      R  +  +L +DP  R      AA++  HPF  
Sbjct: 237 NLHKVSPRLRSFLDRMLVRDPAQRA----TAAELLNHPFLA 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.6 bits (162), Expect = 3e-12
 Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 69/287 (24%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV--NKEVLEKKKKVHRAEM 138
           ++ L + +G G  G VYLC     Y  D G E     A+K V  + +  E  K+V+  E 
Sbjct: 3   NWRLGKLLGRGAFGEVYLC-----YDADTGRE----LAVKQVPFDPDSQETSKEVNALEC 53

Query: 139 EKKILKMLDHPFLPTLYA---EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           E ++LK L H  +   Y    + E    S I +E+  GG +      + +   +    R 
Sbjct: 54  EIQLLKNLRHDRIVQYYGCLRDPEEKKLS-IFVEYMPGGSIKD--QLKAYGALTENVTRR 110

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y  ++L  + YLH   I++RD+K  N+L  S G++ L DF                    
Sbjct: 111 YTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG------------------- 151

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                                     SK+IQT+  +   +         S  GT  ++SP
Sbjct: 152 -------------------------ASKRIQTICMSGTGIK--------SVTGTPYWMSP 178

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
           EV SG  +G   D W+    + EM+  + P+A       +  I  +P
Sbjct: 179 EVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP 225

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 13/151 (8%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G VY           +  E     A K++    +E ++++    +E  IL    
Sbjct: 13  LGDGAFGKVYKA---------QHKETGLFAAAKIIQ---IESEEELEDFMVEIDILSECK 60

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HP +  LY  +   N   I++EFC GG L S+  +      +    R+   ++L AL +L
Sbjct: 61  HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERG-LTEPQIRYVCRQMLEALNFL 119

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           H   +I+RDLK  N+L+  DG + L+DF +S
Sbjct: 120 HSHKVIHRDLKAGNILLTLDGDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 92/370 (24%), Positives = 138/370 (37%), Gaps = 120/370 (32%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           ++L + +G G  G V  CS  N    +   E   +   K+ N  V  KK    RA  E K
Sbjct: 2   YELIKELGQGAYGIV--CSARNAETSE--EETVAI--KKITN--VFSKKILAKRALRELK 53

Query: 142 ILKML-DHPFLPTLYAE--FEASNFSCI-----VMEFCSGGDLHS-LRHKQPHKRFSLTS 192
           +L+    H  +  LY        NF+ +     +ME     DLH  +R  QP     LT 
Sbjct: 54  LLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEA----DLHQIIRSGQP-----LTD 104

Query: 193 ARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
           A F  +  ++L  L+Y+H   +++RDLKP N+LV +D  + + DF L+   +  P   + 
Sbjct: 105 AHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAG 164

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                                      F+ E VA R        
Sbjct: 165 -------------------------------------------FMTEYVATRW------- 174

Query: 311 EYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPF-----------------AAPSNE 352
            Y +PE+  S  S+  A+D W+ G  + E+  GR P                    P  E
Sbjct: 175 -YRAPEIMLSFQSYTKAIDVWSVGCILAEL-LGRKPVFKGKDYVDQLNQILQVLGTPDEE 232

Query: 353 T--------------TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR 398
           T              +L NI KKP  F +  P++     A DL+  LL  DP  R+  + 
Sbjct: 233 TLSRIGSPKAQNYIRSLPNIPKKP--FESIFPNANPL--ALDLLEKLLAFDPTKRISVE- 287

Query: 399 GAADVKTHPF 408
              +   HP+
Sbjct: 288 ---EALEHPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 66.2 bits (162), Expect = 5e-12
 Identities = 85/365 (23%), Positives = 128/365 (35%), Gaps = 115/365 (31%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL---EKKKKVHRAEMEKKIL 143
           +IG G  G V+     +K  +             V  K+VL   EK+     A  E KIL
Sbjct: 19  KIGQGTFGEVF--KARHKKTKQ-----------IVALKKVLMENEKEGFPITALREIKIL 65

Query: 144 KMLDHP----------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           ++L H              T Y  ++ S +  +V EFC   DL  L     + +F+L+  
Sbjct: 66  QLLKHENVVNLIEICRTKATPYNRYKGSFY--LVFEFCEH-DLAGLL-SNKNVKFTLSEI 121

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
           +     +L  L Y+H   I++RD+K  N+L+  DG + L+DF L+             S 
Sbjct: 122 KKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA----------RAFSL 171

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
            + + P             +R+ NR                            V T  Y 
Sbjct: 172 SKNSKP-------------NRYTNR----------------------------VVTLWYR 190

Query: 314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNE-------TTLR--------- 356
            PE+  G    G  +D W  G  + EM + R+P    + E       + L          
Sbjct: 191 PPELLLGERDYGPPIDMWGAGCIMAEM-WTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249

Query: 357 NIVKKPLTFPTQSPSS------------MSEYHARDLISGLLNKDPCNRLGSKRGAADVK 404
            + K  L    + P              + + HA DLI  LL  DP  R+     A    
Sbjct: 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRI----DADTAL 305

Query: 405 THPFF 409
            H FF
Sbjct: 306 NHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 64.7 bits (158), Expect = 9e-12
 Identities = 52/224 (23%), Positives = 79/224 (35%), Gaps = 54/224 (24%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+  LDH  L  LY          +V E    G L     K     F +++   YA 
Sbjct: 46  EAAIMHSLDHENLIRLYGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFLISTLCDYAV 104

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   + YL     I+RDL   N+L+ SD  + + DF L     A+P  E          
Sbjct: 105 QIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGL---MRALPQNE---------- 151

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                Y  +   ++                         P A           + +PE  
Sbjct: 152 ---DHYVMEEHLKV-------------------------PFA-----------WCAPESL 172

Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKK 361
              +  +A D W FG+ ++EM  YG  P+A  S    L+ I K+
Sbjct: 173 RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE 216

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 67/259 (25%), Positives = 100/259 (38%), Gaps = 74/259 (28%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G+ GTVY       Y          + A+KV+  ++  + +K   +E+E  IL   D
Sbjct: 9   LGHGNGGTVY-----KAYHLLTRR----ILAVKVIPLDITVELQKQIMSELE--ILYKCD 57

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
            P++   Y  F   N   I  EF  GG L   R    H        R  A  V+  L YL
Sbjct: 58  SPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEH-----VLGRI-AVAVVKGLTYL 111

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
             L I++RD+KP N+LV + G        + LC   +                       
Sbjct: 112 WSLKILHRDVKPSNMLVNTRGQ-------VKLCDFGV----------------------- 141

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
            ST+L                          V + + ++VGT+ Y++PE  SG  +G   
Sbjct: 142 -STQL--------------------------VNSIAKTYVGTNAYMAPERISGEQYGIHS 174

Query: 328 DWWAFGIFIYEMIYGRTPF 346
           D W+ GI   E+  GR P+
Sbjct: 175 DVWSLGISFMELALGRFPY 193

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 17/186 (9%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R +G G  G V L     ++R D        Y +K +N     ++++   AE E ++L  
Sbjct: 6   RVVGKGSYGEVSLV----RHRTDGKQ-----YVIKKLNLRNASRRER-KAAEQEAQLLSQ 55

Query: 146 LDHPFLPTLYAEFEASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
           L HP +      +E  +    IVM FC GGDL+    +Q  K         +  ++ +AL
Sbjct: 56  LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL 115

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL-----SLCSNAIPAVESP-ASSPEAAS 258
           +YLH   I++RDLK +NV +     I + D  +     + C  A   + +P   SPE  S
Sbjct: 116 QYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS 175

Query: 259 PRSQTY 264
            +   Y
Sbjct: 176 NKPYNY 181

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 68/296 (22%), Positives = 102/296 (34%), Gaps = 85/296 (28%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L     + N   +V EF    DL       P         + Y  
Sbjct: 48  EISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLY 106

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++L  + Y H   +++RDLKP+N+L+  +G + L+DF L+                    
Sbjct: 107 QLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLA-------------------- 146

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +PE+ 
Sbjct: 147 -------------------RAFG-------VPVRTYTHEVV---------TLWYRAPEIL 171

Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNIVKKP 362
            G       VD W+ G    EM+  R  F   S               +E     +   P
Sbjct: 172 LGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231

Query: 363 ---LTFPTQSPSSMS------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
               TFP  +   +S      +    DL+S +L  DP  R+ +K        HP+F
Sbjct: 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ----HPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           RIG G  G V+   ++N+ +Q        + A+K+++ E  E + ++   + E  +L   
Sbjct: 11  RIGKGSFGEVFK-GIDNRTQQ--------VVAIKIIDLE--EAEDEIEDIQQEITVLSQC 59

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
           D P++   Y  +       I+ME+  GG    L    P   F + +      E+L  L+Y
Sbjct: 60  DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATM---LKEILKGLDY 116

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           LH    I+RD+K  NVL+   G + L+DF ++
Sbjct: 117 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 62.2 bits (151), Expect = 8e-11
 Identities = 79/333 (23%), Positives = 120/333 (36%), Gaps = 81/333 (24%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPC-CLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +G G+ G+VY      K      H P     AMK +  E+ E K   ++  ME  IL   
Sbjct: 9   LGKGNYGSVY------KVL----HRPTGVTMAMKEIRLELDESK--FNQIIMELDILHKA 56

Query: 147 DHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSLR-HKQPHKRFSLTSARFYAAEVLVA 203
             P++   Y  F  E + + C  ME+   G L  L       +       R     V+  
Sbjct: 57  VSPYIVDFYGAFFIEGAVYMC--MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKG 114

Query: 204 LEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQ 262
           L++L     II+RD+KP NVLV  +G + L DF +S              +  A+  ++ 
Sbjct: 115 LKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS-------------GNLVASLAKTN 161

Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS 322
              + Y                   + P R+    P    + +       V  +V     
Sbjct: 162 IGCQSY-------------------MAPERIKSGGPNQNPTYT-------VQSDV----- 190

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---LRNIVKKPLTFPTQSPSSMSEYHAR 379
                  W+ G+ I EM  GR P+   +       L  IV      P   PS  S+  A+
Sbjct: 191 -------WSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD---PPTLPSGYSD-DAQ 239

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           D ++  LNK P  R       A +  HP+    
Sbjct: 240 DFVAKCLNKIPNRR----PTYAQLLEHPWLVKY 268

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 62.3 bits (151), Expect = 8e-11
 Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 17/153 (11%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G VY         + +  E   L A KV++ +    ++++    +E  IL   D
Sbjct: 13  LGDGAFGKVY---------KAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD 60

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           HP +  L   F   N   I++EFC+GG  D   L  ++P    +    R    + L AL 
Sbjct: 61  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTEPQIRVVCKQTLEALN 117

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           YLH   II+RDLK  N+L   DG I L+DF +S
Sbjct: 118 YLHENKIIHRDLKAGNILFTLDGDIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 81/308 (26%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           RIG G  G VY   ++N+ ++        + A+K+++ E  E + ++   + E  +L   
Sbjct: 11  RIGKGSFGEVYK-GIDNRTKE--------VVAIKIIDLE--EAEDEIEDIQQEITVLSQC 59

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALE 205
           D P++   Y  +       I+ME+  GG    L    P  + +  T  R    E+L  L+
Sbjct: 60  DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLD 115

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           YLH    I+RD+K  NVL+   G + L+DF ++                           
Sbjct: 116 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVA--------------------------G 149

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
           +   T++ R  N F G       TP   F   P                 EV    ++  
Sbjct: 150 QLTDTQIKR--NTFVG-------TP---FWMAP-----------------EVIKQSAYDF 180

Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA---RDLI 382
             D W+ GI   E+  G  P    S+   +R +       P  SP ++   ++   ++ +
Sbjct: 181 KADIWSLGITAIELAKGEPPN---SDLHPMRVL----FLIPKNSPPTLEGQYSKPFKEFV 233

Query: 383 SGLLNKDP 390
              LNKDP
Sbjct: 234 EACLNKDP 241

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 78/327 (23%), Positives = 125/327 (38%), Gaps = 85/327 (25%)

Query: 77  LTFRD-----FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
           L F++     F   R IG G  G VY        R  R +E   +  M    K+  EK +
Sbjct: 17  LFFKEDPEKLFTDLREIGHGSFGAVYFA------RDVRTNEVVAIKKMSYSGKQSNEKWQ 70

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFS 189
            + +   E K L+ + HP        +   + + +VME+C  S  DL  + HK+P +   
Sbjct: 71  DIIK---EVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVE 126

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
           + +    A   L  L YLH   +I+RD+K  N+L+   G + L+DF  +       ++ S
Sbjct: 127 IAAITHGA---LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA-------SIAS 176

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
           PA+S                                                    FVGT
Sbjct: 177 PANS----------------------------------------------------FVGT 184

Query: 310 HEYVSPEV---ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
             +++PEV      G +   VD W+ GI   E+   + P    +  + L +I +     P
Sbjct: 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESP 242

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
           T   +  S+Y  R+ +   L K P +R
Sbjct: 243 TLQSNEWSDYF-RNFVDSCLQKIPQDR 268

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 85/374 (22%), Positives = 126/374 (33%), Gaps = 114/374 (30%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR---- 135
           RD+++  ++G G  G VY      K RQ +      L            KK  +H     
Sbjct: 8   RDYEILGKLGEGTFGEVY------KARQIKTGRVVAL------------KKILMHNEKDG 49

Query: 136 ----AEMEKKILKMLDHP-FLPTLYAEFEASNFS-----CIVMEF---CSGGDLHSLRHK 182
               A  E KILK L HP  +P +    E  + S      + M         DL  L   
Sbjct: 50  FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH--DLSGLLE- 106

Query: 183 QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
            P  + + +  + Y  ++L  + YLH   I++RD+K  N+L+ + G + ++DF L     
Sbjct: 107 NPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL----- 161

Query: 243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
           A P    P +        ++ YT                                     
Sbjct: 162 ARPYDGPPPNPKGGGGGGTRKYT------------------------------------- 184

Query: 303 SCSFVGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFA-------------- 347
             + V T  Y  PE+  G   +  AVD W  G    EM   R                  
Sbjct: 185 --NLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242

Query: 348 -APSNETTLRNIVKKP-----LTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLG 395
                E T       P      +F    P ++ E   +      DL+S LL+ DP  RL 
Sbjct: 243 CGTPTEETWPGWRSLPGCEGVHSFTNY-PRTLEERFGKLGPEGLDLLSKLLSLDPYKRL- 300

Query: 396 SKRGAADVKTHPFF 409
               A+D   HP+F
Sbjct: 301 ---TASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 73/313 (23%), Positives = 115/313 (36%), Gaps = 80/313 (25%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R IG G  G VY        R  R  E   +  M    K+  EK + + +   E + L+ 
Sbjct: 21  REIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQK 71

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           L HP        +   + + +VME+C  S  DL  + HK+P +   + +    A   L  
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGA---LQG 127

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           L YLH   +I+RD+K  N+L+   G + L DF  +       ++ +PA+           
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA-------SIMAPANX---------- 170

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV---ASG 320
                                                     FVGT  +++PEV      
Sbjct: 171 ------------------------------------------FVGTPYWMAPEVILAMDE 188

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
           G +   VD W+ GI   E+   + P    +  + L +I +     P       SEY  R+
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYF-RN 245

Query: 381 LISGLLNKDPCNR 393
            +   L K P +R
Sbjct: 246 FVDSCLQKIPQDR 258

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-----LRNIV 359
           +FVGT  Y++PE   G  +    D W+ G+ + E+  GR P+   ++        L+ IV
Sbjct: 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV 217

Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
            +P   P + PS       +D ++  L KDP  R   K     +  HPF K 
Sbjct: 218 NEP---PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKE----LLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 60.1 bits (146), Expect = 4e-10
 Identities = 79/354 (22%), Positives = 120/354 (33%), Gaps = 94/354 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D+    +IG G  G VY      K R  +  +   + AMK +  E  E++     A  E 
Sbjct: 1   DYTKIEKIGEGTYGVVY------KGRNKKTGQ---IVAMKKIRLES-EEEGVPSTAIREI 50

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +LK L HP +  L       +   ++ EF S      L      +       + Y  ++
Sbjct: 51  SLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQI 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  + + H   +++RDLKP+N+L+ + G I L+DF L+                      
Sbjct: 111 LQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLA---------------------- 148

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                            R FG        P R++  E V         T  Y +PEV  G
Sbjct: 149 -----------------RAFG-------IPVRVYTHEVV---------TLWYRAPEVLLG 175

Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNIVKKP-- 362
              +   VD W+ G    EM   +  F   S                E     +   P  
Sbjct: 176 SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235

Query: 363 -LTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             TFP     S+            DL+  +L  DP  R+ +K        HP+F
Sbjct: 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK----KALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 61/236 (25%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 128 EKKKKVHRAEM-EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
           E  K V +  M E ++LK L H  L  L   F       +V EF     L  L    P+ 
Sbjct: 38  EDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNG 96

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
                  + Y  ++L  +E+ H   II+RD+KPEN+LV   G + L DF  +        
Sbjct: 97  LDESRVRK-YLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA-------- 147

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
             + A+  E        YT   +TR                                   
Sbjct: 148 -RTLAAPGEV-------YTDYVATRW---------------------------------- 165

Query: 307 VGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
                Y +PE+  G   +G AVD WA G  + EM+ G   F   S+   L +I+K 
Sbjct: 166 -----YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 12/107 (11%)

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET----TLRNIVKKPL 363
           GT +Y SPE   G ++  + DWWA G+  YE++ G+ PF    +E     +L    +K L
Sbjct: 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKL 227

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            F      ++S  +A D +  +L  +   RL +     ++  HPF K
Sbjct: 228 PF----IKNVS-KNANDFVQSMLKYNINYRLTNYN---EIIKHPFLK 266

Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 60.2 bits (146), Expect = 5e-10
 Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 16/168 (9%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R IG G  G VY        R  R +E   +  M    K+  EK + + +   E + L+ 
Sbjct: 21  REIGHGSFGAVYFA------RDVRTNEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQQ 71

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           L HP        +   + + +VME+C  S  D+  + HK+P +   + +        L  
Sbjct: 72  LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEV-HKKPLQEVEIAAI---CHGALQG 127

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF-DLSLCSNAIPAVESP 250
           L YLH    I+RD+K  N+L+   G + L+DF   SL S A   V +P
Sbjct: 128 LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTP 175

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 12/119 (10%)

Query: 130 KKKVH---RAEMEKKILKMLD--H----PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLR 180
           KK VH   ++ + K+IL+ L   H    P++ + Y  F   N  C+ MEF   G L  + 
Sbjct: 35  KKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIY 94

Query: 181 HKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            K       +      A  V+  L YL+ +  I++RD+KP N+LV S G I L DF +S
Sbjct: 95  KKGGPIPVEILGK--IAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 61.3 bits (149), Expect = 6e-10
 Identities = 70/336 (20%), Positives = 127/336 (37%), Gaps = 81/336 (24%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCC--LYAMKVVNKEVLEKKKKVHRAEME 139
           +D+ R IG G +G VYL            ++P C    A+K + +++ E      R   E
Sbjct: 4   YDIIRLIGKGGMGEVYL-----------AYDPVCSRRVALKKIREDLSENPLLKKRFLRE 52

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH---------KQPHKRFSL 190
            KI   L HP +  +Y+     +     M +  G  L SL           K+  ++ S+
Sbjct: 53  AKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSV 112

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
            +      ++   +EY+H  G+++RDLKP+N+L+   G +++ D+  ++           
Sbjct: 113 GAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLT-PNRLFVAEPVAARSCSFVGT 309
               E     S                          +T P ++             VGT
Sbjct: 173 IDVDERNICYSS-------------------------MTIPGKI-------------VGT 194

Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ- 368
            +Y++PE   G     + D +A G+ +Y+M+    P+         R    + +++    
Sbjct: 195 PDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY---------RRKKGRKISYRDVI 245

Query: 369 -SPSSMSEYHARDLISGL-------LNKDPCNRLGS 396
            SP  ++ Y  R++   L       L  DP  R  S
Sbjct: 246 LSPIEVAPY--REIPPFLSQIAMKALAVDPAERYSS 279

Length = 932

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 59.3 bits (143), Expect = 7e-10
 Identities = 65/314 (20%), Positives = 121/314 (38%), Gaps = 79/314 (25%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           +IG G  G V+   ++N+ ++        + A+K+++ E  E + ++   + E  +L   
Sbjct: 11  KIGKGSFGEVFK-GIDNRTQK--------VVAIKIIDLE--EAEDEIEDIQQEITVLSQC 59

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
           D P++   Y  +       I+ME+  GG    L    P     + +      E+L  L+Y
Sbjct: 60  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI---LREILKGLDY 116

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           LH    I+RD+K  NVL+   G + L+DF ++                           +
Sbjct: 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA--------------------------GQ 150

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
              T++ R  N F G                           T  +++PEV    ++ + 
Sbjct: 151 LTDTQIKR--NTFVG---------------------------TPFWMAPEVIKQSAYDSK 181

Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL---IS 383
            D W+ GI   E+  G  P +         + +K     P  +P ++   +++ L   + 
Sbjct: 182 ADIWSLGITAIELAKGEPPHSE-------LHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 234

Query: 384 GLLNKDPCNRLGSK 397
             LNK+P  R  +K
Sbjct: 235 ACLNKEPSFRPTAK 248

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 59.3 bits (144), Expect = 7e-10
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 14/150 (9%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMK-VVNKEVLEKKKKVHRAEMEKKILKM 145
           +IG G  G V+ C         R  E   + A+K  V  E     KK+  A  E ++LK 
Sbjct: 8   KIGEGSYGVVFKC---------RNRETGQIVAIKKFVESEDDPVIKKI--ALREIRMLKQ 56

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L HP L  L   F       +V E+C    L+ L  K P         +    + L A+ 
Sbjct: 57  LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNEL-EKNPRGVPEHLIKKI-IWQTLQAVN 114

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           + H    I+RD+KPEN+L+   G I L DF
Sbjct: 115 FCHKHNCIHRDVKPENILITKQGQIKLCDF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 93/407 (22%), Positives = 142/407 (34%), Gaps = 108/407 (26%)

Query: 38  SFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVY 97
            FE+   K   E  S   +   D     +      R      + + L   IG G  G VY
Sbjct: 27  KFEMNDKKLDEEERSHNNNAGEDEDEEKMIDNDINRSPN---KSYKLGNIIGNGSFGVVY 83

Query: 98  LCSLNNKYRQDRGHEPCCL-YAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY- 155
                         E  C+  + KV  K+VL+  +  +R  +  K L  ++  FL   Y 
Sbjct: 84  --------------EAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYY 129

Query: 156 ----AEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYAAEVLVALEYLHML 210
                + E + F  +VMEF        ++H  + +    L   + Y+ ++  AL Y+H  
Sbjct: 130 TECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK 189

Query: 211 GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYST 270
            I +RDLKP+N+L+  + H       L LC                              
Sbjct: 190 FICHRDLKPQNLLIDPNTHT------LKLCD----------------------------- 214

Query: 271 RLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGNAVDW 329
                    FGS K      N L        RS S++ +  Y +PE+  G + +   +D 
Sbjct: 215 ---------FGSAK------NLL-----AGQRSVSYICSRFYRAPELMLGATNYTTHIDL 254

Query: 330 WAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------------KPLTFPTQSPSS 372
           W+ G  I EMI G   F+  S+   L  I++                   + FP   P  
Sbjct: 255 WSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKD 314

Query: 373 MSEY-------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           + +         A + IS  L  +P  RL      AD    PFF  L
Sbjct: 315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD----PFFDDL 357

Length = 440

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 20/104 (19%)

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRT-----PFAAPSNETTLRNIVKKPLTFP 366
           Y +PEV        A DWW+ G  ++E++ G+T     P +  +  TTL           
Sbjct: 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHP-SGINTHTTL----------- 195

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFF 409
              P  +SE  AR L+  LL  +P  RLG+   G  D+K+HPFF
Sbjct: 196 -NIPEWVSE-EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 16/160 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            D++L +R+G+G  G VY      K R     E   L A+K++    LE        + E
Sbjct: 9   HDYELIQRVGSGTYGDVY------KARNLHTGE---LAAVKIIK---LEPGDDFSLIQQE 56

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYAA 198
             ++K   H  +   +  + +     I ME+C GG L  + H   P     +    +   
Sbjct: 57  IFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIA---YVCR 113

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           E L  L YLH  G ++RD+K  N+L+  +G + L+DF ++
Sbjct: 114 ETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 76/350 (21%), Positives = 123/350 (35%), Gaps = 99/350 (28%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           ++G G   TVY         + R      + A+K ++ +  E       A  E  ++K L
Sbjct: 7   KLGEGTYATVY---------KGRNRTTGEIVALKEIHLDAEEGTPST--AIREISLMKEL 55

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSARFYAAEVLVALE 205
            H  +  L+      N   +V E+    DL         +      + + +  ++L  + 
Sbjct: 56  KHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIA 114

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           + H   +++RDLKP+N+L+   G + L+DF L+                           
Sbjct: 115 FCHENRVLHRDLKPQNLLINKRGELKLADFGLA--------------------------- 147

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-SHG 324
                       R FG        P   F  E V         T  Y +P+V  G  ++ 
Sbjct: 148 ------------RAFG-------IPVNTFSNEVV---------TLWYRAPDVLLGSRTYS 179

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-------------------KPLTF 365
            ++D W+ G  + EMI GR  F   +NE  L  I +                   KP TF
Sbjct: 180 TSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP-TF 238

Query: 366 PTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           P   P  + +          DL+  LL  +P  R+     A D   HP+F
Sbjct: 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI----SAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---------- 354
           +FVGT  Y+SPE   GG +    D W+ GI I E+  G+ PFA  + +            
Sbjct: 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220

Query: 355 -LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
            L+ IV++P   P + PSS      RD +   L KDP  R   ++        PF
Sbjct: 221 LLQQIVQEP---PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ---LCAMPPF 269

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKKIL 143
           + +G G+ G+V    +   Y    G E     A+K + +E +   KK    E   E  ++
Sbjct: 1   KELGHGNFGSV----VKGVYLMKSGKEVEV--AVKTLKQEHIAAGKK----EFLREASVM 50

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
             LDHP +  L    +      +VME    G L     K+      ++  +  A +V + 
Sbjct: 51  AQLDHPCIVRLIGVCKGEPL-MLVMELAPLGPLLKYLKKRRE--IPVSDLKELAHQVAMG 107

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + YL     ++RDL   NVL+ +     +SDF +S
Sbjct: 108 MAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMS 142

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 91/369 (24%), Positives = 131/369 (35%), Gaps = 118/369 (31%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCL-YAMKVVNKEVL-EKKKKVHRAEM 138
           DF+    +GAG+ G V              H P  L  A K+++ E+    + ++ R   
Sbjct: 2   DFEKLGELGAGNGGVVTKVL----------HRPSGLIMARKLIHLEIKPAIRNQIIR--- 48

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARF 195
           E K+L   + P++   Y  F +     I ME   GG L  +  K    P       S   
Sbjct: 49  ELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKIS--- 105

Query: 196 YAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSNAIPAVESPAS 252
            A  VL  L YL     I++RD+KP N+LV S G I L DF +S  L       ++S A+
Sbjct: 106 IA--VLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN 156

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
           S           TR Y                   ++P RL              GTH  
Sbjct: 157 SFVG--------TRSY-------------------MSPERL-------------QGTHYT 176

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP------------FAAPSNETTLRNIVK 360
           V              D W+ G+ + EM  GR P            F  P +E   +   +
Sbjct: 177 VQS------------DIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHR 224

Query: 361 KPLTFPTQSPSSMSEYHARDLI---------SGLLNKDPCN-------RLGSKRGAADVK 404
                P  SP  M+ +   D I         SG  + +  +       +   +R  AD+K
Sbjct: 225 PVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKER--ADLK 282

Query: 405 ---THPFFK 410
               HPF K
Sbjct: 283 ELTKHPFIK 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN-------KEVLEKKKKVH 134
           + +   +G+G  G VY      K R+        L A+K +N       K+  E+ K + 
Sbjct: 2   YAVLEHLGSGAFGCVY------KVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIG 53

Query: 135 RAEMEKKILK-MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLT 191
               E  I+K  L HP +   Y  F  ++   IVM+   G  L  H    K+  +RF  T
Sbjct: 54  DIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRF--T 111

Query: 192 SARFYA--AEVLVALEYLHMLG-IIYRDLKPENVLVRSDGHIMLSDFDLS 238
             R +    ++++AL YLH    I++RDL P N+++  D  + ++DF L+
Sbjct: 112 EERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 56.4 bits (136), Expect = 4e-09
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 20/160 (12%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +V++   GG L S   K  +          +AAE++VAL+ LH  GI+ RDL P N+L+ 
Sbjct: 62  LVLQHAEGGKLWSHISKFLNIPEECVKR--WAAEMVVALDALHREGIVCRDLNPNNILLD 119

Query: 226 SDGHIML------SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRF 279
             GHI L      S+ + S       AVE+   +PE      +T    + +         
Sbjct: 120 DRGHIQLTYFSRWSEVEDSCDGE---AVENMYCAPEVGGISEETEACDWWS--------- 167

Query: 280 FGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
            G+   + LT   L    P    + + +   E+VS E  S
Sbjct: 168 LGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARS 207

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 78/350 (22%), Positives = 117/350 (33%), Gaps = 97/350 (27%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IG G  GTVY      K R         L +++V   E       V    + K+ L+  D
Sbjct: 8   IGVGAYGTVY------KARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKR-LEAFD 60

Query: 148 HPFLPTLY-----AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           HP +  L      +  +      +V E     DL +   K P       + +    + L 
Sbjct: 61  HPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLR 119

Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQ 262
            L++LH   I++RDLKPEN+LV S G + L+DF L+                        
Sbjct: 120 GLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLA------------------------ 155

Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS 322
              R YS +++              LTP                V T  Y +PEV    +
Sbjct: 156 ---RIYSCQMA--------------LTP---------------VVVTLWYRAPEVLLQST 183

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPF-----------------AAPSNETTLRNIVKKPLTF 365
           +   VD W+ G    EM + R P                    P  +   R++      F
Sbjct: 184 YATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAF 242

Query: 366 PTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             + P  +             L+  +L  +P  R+     A     HPFF
Sbjct: 243 SPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI----SAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 58.0 bits (140), Expect = 4e-09
 Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 91/332 (27%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           + R +G+G  GTV LC+     ++    EP   +A+KVV+ E + +  K +RA+ E   L
Sbjct: 36  ISRVLGSGATGTV-LCA-----KRVSDGEP---FAVKVVDMEGMSEADK-NRAQAEVCCL 85

Query: 144 KMLDHPFLPTLYAEF--------EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
              D   +   + +F        E      +V+++ + GDL     +Q  K  + T+  F
Sbjct: 86  LNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDL-----RQEIKSRAKTNRTF 140

Query: 196 YAAE-------VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
              E       VL+A+ ++H   +I+RD+K  N+L+ S+G + L DF             
Sbjct: 141 REHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG------------ 188

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                          +++ Y+  +S  + R                          +F G
Sbjct: 189 ---------------FSKMYAATVSDDVGR--------------------------TFCG 207

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FP 366
           T  YV+PE+     +    D ++ G+ +YE++  + PF   +    +  ++ K L   + 
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN----MEEVMHKTLAGRYD 263

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKR 398
              PS   E   +++++ LL+ DP  R  S +
Sbjct: 264 PLPPSISPE--MQEIVTALLSSDPKRRPSSSK 293

Length = 496

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 24/159 (15%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK--EVLEKKKKVHRAEMEKKILKM 145
           +G+G  G V  CS  +     +        A+K +++  +     K+ +R   E ++LK 
Sbjct: 23  VGSGAYGQV--CSAFDTKTGRK-------VAIKKLSRPFQSAIHAKRTYR---ELRLLKH 70

Query: 146 LDHPFLPTLYAEF----EASNFSCI--VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           +DH  +  L   F       +F  +  V     G DL+++   Q   + S    +F   +
Sbjct: 71  MDHENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADLNNIVKCQ---KLSDDHIQFLVYQ 126

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +L  L+Y+H  GII+RDLKP N+ V  D  + + DF L+
Sbjct: 127 ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 57.1 bits (138), Expect = 6e-09
 Identities = 60/296 (20%), Positives = 104/296 (35%), Gaps = 72/296 (24%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E KI+  + H  +  L   +   +F  +VM+  +  DL  +  ++   R + +  +    
Sbjct: 70  ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRK--IRLTESQVKCILL 126

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++L  L  LH    ++RDL P N+ + S G   ++DF L+                    
Sbjct: 127 QILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRY--------------GYP 172

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
           P S T ++                   +T+       ++ V         T  Y +PE+ 
Sbjct: 173 PYSDTLSKD------------------ETMQRREEMTSKVV---------TLWYRAPELL 205

Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNIVKKP 362
            G   +  AVD W+ G    E++ G+  F   +               NE       K P
Sbjct: 206 MGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLP 265

Query: 363 LTFP--TQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           L      + P  +          A DL+  LL  +P  R+     A +   H +FK
Sbjct: 266 LYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERI----SAKEALKHEYFK 317

Length = 335

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 60/275 (21%), Positives = 100/275 (36%), Gaps = 69/275 (25%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKKILKM 145
           IG G+ G V    L    +           A+K +     +K+    R +   E  I+  
Sbjct: 12  IGGGEFGEVCRGRLKLPGK------KEIDVAIKTLKAGSSDKQ----RLDFLTEASIMGQ 61

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVAL 204
            DHP +  L      S    I+ E+   G L   LR      +F++         +   +
Sbjct: 62  FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGM 119

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           +YL  +  ++RDL   N+LV S+    +SDF LS        +E   ++           
Sbjct: 120 KYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLS------RRLEDSEAT----------- 162

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
              Y+T+            KI    P R                   + +PE  +     
Sbjct: 163 ---YTTK----------GGKI----PIR-------------------WTAPEAIAYRKFT 186

Query: 325 NAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
           +A D W+FGI ++E M YG  P+   SN+  ++ +
Sbjct: 187 SASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV 221

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 21/172 (12%)

Query: 83  DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI 142
            LH  IG G  G VY  +          +E   +  M    K+  EK + + +   E K 
Sbjct: 25  GLHE-IGHGSFGAVYFAT------NSHTNEVVAVKKMSYSGKQTNEKWQDIIK---EVKF 74

Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLR-HKQPHKRFSLTSARFYAAEVL 201
           L+ L HP        +   + + +VME+C G     L  HK+P +   + +    A   L
Sbjct: 75  LQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGA---L 131

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
             L YLH   +I+RD+K  N+L+   G + L+DF  +       +  SPA+S
Sbjct: 132 QGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA-------SKSSPANS 176

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 73/325 (22%), Positives = 118/325 (36%), Gaps = 108/325 (33%)

Query: 127 LEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLR 180
            + +    RA  E  +LK ++H  + +L   F      E      +VME         + 
Sbjct: 58  FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH 117

Query: 181 HKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC 240
            +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  
Sbjct: 118 MELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-- 170

Query: 241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA 300
                                        T  + F+           +TP          
Sbjct: 171 ----------------------------RTACTNFM-----------MTP---------- 181

Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------------- 346
                +V T  Y +PEV  G  +   VD W+ G  + E++ G   F              
Sbjct: 182 -----YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236

Query: 347 --AAPSNE------TTLRNIVK-KP-------------LTFPTQSP-SSMSEYHARDLIS 383
               PS E       T+RN V+ +P               FP++S    +    ARDL+S
Sbjct: 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLS 296

Query: 384 GLLNKDPCNRLGSKRGAADVKTHPF 408
            +L  DP  R+       +   HP+
Sbjct: 297 KMLVIDPDKRI----SVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 71/276 (25%), Positives = 108/276 (39%), Gaps = 62/276 (22%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           + + IGAG+ G V  CS   K    R  E     A+K +     EK+++   +E    I+
Sbjct: 8   IEKVIGAGEFGEV--CSGRLKLPGKR--EIPV--AIKTLKAGYTEKQRRDFLSE--ASIM 59

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
              DHP +  L      S    IV E+   G L +   K    +F++         +   
Sbjct: 60  GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASG 118

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           ++YL  +G ++RDL   N+LV S+    +SDF LS               PEAA      
Sbjct: 119 MKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLS---------RVLEDDPEAA------ 163

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
               Y+TR         G K      P R    E +A R  +                  
Sbjct: 164 ----YTTR---------GGK-----IPIRWTAPEAIAYRKFT------------------ 187

Query: 324 GNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
            +A D W++GI ++E M YG  P+   SN+  ++ I
Sbjct: 188 -SASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI 222

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 18/168 (10%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE--M 138
              L R +G G  G VY        + +           +V  K V E      R E   
Sbjct: 7   KITLIRELGQGSFGMVYEGLAKGVVKGEPE--------TRVAIKTVNENASMRERIEFLN 58

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-----SLTS 192
           E  ++K  +   +  L         + +VME  + GDL S LR ++P           T 
Sbjct: 59  EASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118

Query: 193 ARFY--AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +F   AAE+   + YL     ++RDL   N +V  D  + + DF ++
Sbjct: 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMT 166

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 20/182 (10%)

Query: 71  FGRKTGLTFRDFDLHRRIGAGDIGTVYLCS---LNNKYRQDRGHEPCCLYAMKVVNKEVL 127
           F RK  LTF++     ++G G  G V+LC    +     +D   +      + V  K + 
Sbjct: 2   FPRKR-LTFKE-----KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLR 55

Query: 128 EKKKKVHRAEM--EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQ 183
           E   K  R +   E KI+  L  P +  L A    S+  C++ E+   GDL+    RH+ 
Sbjct: 56  EDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEP 115

Query: 184 PH-------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
                       S ++  F A ++   ++YL  L  ++RDL   N LV  +  I ++DF 
Sbjct: 116 QEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFG 175

Query: 237 LS 238
           +S
Sbjct: 176 MS 177

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 77/263 (29%)

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           +E  +L+ ++HP +  +     +   +C+V+   S  DL++   K+  +   +  A    
Sbjct: 106 IEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKR-SRPLPIDQALIIE 163

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            ++L  L YLH   II+RD+K EN+ +     + + D                       
Sbjct: 164 KQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDL---------------------- 201

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                  G+ +   + P  L +A           GT E  +PEV
Sbjct: 202 -----------------------GAAQFPVVAPAFLGLA-----------GTVETNAPEV 227

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            +   + +  D W+ GI ++EM+      A PS       I + P + P +        H
Sbjct: 228 LARDKYNSKADIWSAGIVLFEML------AYPS------TIFEDPPSTP-EEYVKSCHSH 274

Query: 378 ARDLISGL------LNKDPCNRL 394
              +IS L        +DP +RL
Sbjct: 275 LLKIISTLKVHPEEFPRDPGSRL 297

Length = 357

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 53.8 bits (130), Expect = 5e-08
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 14/110 (12%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN---IVKK 361
           S VGT  +++PEV     +G  VD W+ GI   EM  G  P+     E  LR    I  K
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYL---REPPLRALFLITTK 231

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFK 410
            +  P ++P   S    +D ++  L KDP      KR +A ++  HPF K
Sbjct: 232 GIP-PLKNPEKWSP-EFKDFLNKCLVKDP-----EKRPSAEELLQHPFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 55.1 bits (132), Expect = 5e-08
 Identities = 89/361 (24%), Positives = 143/361 (39%), Gaps = 88/361 (24%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           ++++ ++IG G  G V+L       +  R  E  C  A+     +  EK + V    +E 
Sbjct: 14  EYEVIKKIGNGRFGEVFLV------KHKRTQEFFCWKAISYRGLKEREKSQLV----IEV 63

Query: 141 KILKMLDHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY-- 196
            +++ L H  +      F  +A+    I+MEFC  GDL S   ++ +K F          
Sbjct: 64  NVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVD 122

Query: 197 -AAEVLVALEYLHMLG-------IIYRDLKPENVL----VRSDGHIMLSDFDLSLCSNAI 244
              ++L AL Y H L        +++RDLKP+N+     +R  G I     +L    N  
Sbjct: 123 ITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL----NGR 178

Query: 245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC 304
           P  +                           +  F  SK I   +           A SC
Sbjct: 179 PIAK---------------------------IGDFGLSKNIGIES----------MAHSC 201

Query: 305 SFVGTHEYVSPEVA--SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
             VGT  Y SPE+      S+ +  D WA G  IYE+  G+TPF   +N + L + +K+ 
Sbjct: 202 --VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG 259

Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
              P +  S         LI  LLN      L +K   + ++       L + +I+++ P
Sbjct: 260 PDLPIKGKSK----ELNILIKNLLN------LSAKERPSALQC------LGYQIIKNVGP 303

Query: 423 P 423
           P
Sbjct: 304 P 304

Length = 1021

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 54.3 bits (130), Expect = 6e-08
 Identities = 68/298 (22%), Positives = 104/298 (34%), Gaps = 102/298 (34%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160

Query: 226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI 285
           SD  + + DF L+                                       R  G+   
Sbjct: 161 SDCTLKILDFGLA---------------------------------------RTAGTS-- 179

Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
                   F+  P       +V T  Y +PEV  G  +   VD W+ G  + EMI G   
Sbjct: 180 --------FMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224

Query: 346 F----------------AAPSNE------TTLRNIVK-KP-------------LTFPTQS 369
           F                  P  E       T+R  V+ +P             + FP  S
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284

Query: 370 P-SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
             + +    ARDL+S +L  D   R+       +   HP+             PP+IP
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIP 338

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)

Query: 122 VNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS--------------CIV 167
           V K VL   + V  A  E KI++ LDH  +  +Y     S                  IV
Sbjct: 35  VKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIV 94

Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
            E     DL ++  + P    S   AR +  ++L  L+Y+H   +++RDLKP NV + ++
Sbjct: 95  QE-YMETDLANVLEQGP---LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE 150

Query: 228 GHIM-LSDFDLS 238
             ++ + DF L+
Sbjct: 151 DLVLKIGDFGLA 162

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 53.7 bits (129), Expect = 7e-08
 Identities = 89/374 (23%), Positives = 133/374 (35%), Gaps = 117/374 (31%)

Query: 71  FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK 130
           FG    +T R  DL + +G G  G V  CS      Q  G        MK  +  VL K 
Sbjct: 2   FGTVFEITNRYVDL-QPVGMGAFGLV--CS---ARDQLTGQNVAIKKIMKPFSTPVLAK- 54

Query: 131 KKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP-HKRFS 189
               R   E K+LK L H  + +L   F +       +    G DLH L   +P  K+F 
Sbjct: 55  ----RTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQF- 109

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
               +++  ++L  L+Y+H  G+++RDLKP N+L+  +        DL +C         
Sbjct: 110 ---IQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN-------CDLKICD-------- 151

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                         FG  +IQ          +P   +   +V T
Sbjct: 152 ------------------------------FGLARIQ----------DP---QMTGYVST 168

Query: 310 HEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPS-- 350
             Y +PE+  +   +   VD W+ G    EM+ G+  F                  P   
Sbjct: 169 RYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228

Query: 351 ------NETTLRNIV------KKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS 396
                 +E TLR +         P +  F    PS      A DL+  +L  DP  R+  
Sbjct: 229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPS------AIDLLEKMLVFDPQKRI-- 280

Query: 397 KRGAADVKTHPFFK 410
              AA+   HP+  
Sbjct: 281 --SAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 15/153 (9%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G+G  G V+L     K             A+K++ +  + +   +     E K++  
Sbjct: 10  KELGSGQFGVVHLGKWRGKID----------VAIKMIREGAMSEDDFIE----EAKVMMK 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L HP L  LY          IV E+ + G L +   ++  K           ++V  A+E
Sbjct: 56  LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGK-LGTEWLLDMCSDVCEAME 114

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           YL   G I+RDL   N LV  D  + +SDF L+
Sbjct: 115 YLESNGFIHRDLAARNCLVGEDNVVKVSDFGLA 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 85/369 (23%), Positives = 140/369 (37%), Gaps = 112/369 (30%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           + +   IG G  G V  CS  + +  ++        A+K +N +V E      R   E K
Sbjct: 2   YKIQEVIGKGSYGVV--CSAIDTHTGEK-------VAIKKIN-DVFEHVSDATRILREIK 51

Query: 142 ILKMLDHP--------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           +L++L HP         LP    EF+       +ME     DLH +   + +   +    
Sbjct: 52  LLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME----SDLHQV--IKANDDLTPEHH 105

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
           +F+  ++L AL+Y+H   + +RDLKP+N+L  +D  + + DF L+  +            
Sbjct: 106 QFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA------------ 153

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                F +           TP  +F  + VA R         Y 
Sbjct: 154 ---------------------FND-----------TPTAIFWTDYVATRW--------YR 173

Query: 314 SPEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNETT- 354
           +PE+       +  A+D W+ G    E++ G+  F                  PS ET  
Sbjct: 174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233

Query: 355 -LRNI----------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV 403
            +RN            K+P+ F  + P+  ++  A  L+  LL  DP +R      A + 
Sbjct: 234 RVRNEKARRYLSSMRKKQPVPFSQKFPN--ADPLALRLLERLLAFDPKDR----PTAEEA 287

Query: 404 KTHPFFKGL 412
              P+FKGL
Sbjct: 288 LADPYFKGL 296

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 58/249 (23%), Positives = 89/249 (35%), Gaps = 86/249 (34%)

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           S+ + R +  ++L  L Y H   +++RDLKP+N+L+   G + L+DF L+          
Sbjct: 101 SMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLA---------- 150

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                  A S  S+TY+ +  T   R               P+ L             +G
Sbjct: 151 ------RAKSVPSKTYSNEVVTLWYR--------------PPDVL-------------LG 177

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----------------AAPSN 351
           + EY +            +D W  G   YEM  GR  F                   P+ 
Sbjct: 178 STEYSTS-----------LDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTE 226

Query: 352 ET---TLRNIVKKPLTFPTQSPSSMSEY--------HARDLISGLLNKDPCNRLGSKRGA 400
           ET      N   KP +FP   P  +  +        H  +L    L  +P  R+     A
Sbjct: 227 ETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRI----SA 282

Query: 401 ADVKTHPFF 409
           A+   HP+F
Sbjct: 283 AEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 62/275 (22%), Positives = 96/275 (34%), Gaps = 95/275 (34%)

Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
           +VME+    DL SL    KQP   F  +  +    ++L  + +LH   I++RDLK  N+L
Sbjct: 83  MVMEYVEH-DLKSLMETMKQP---FLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLL 138

Query: 224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSK 283
           + + G + + DF L+                           R+Y + L  +        
Sbjct: 139 LNNRGILKICDFGLA---------------------------REYGSPLKPY-------- 163

Query: 284 KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYG 342
                T                 V T  Y +PE+  G      A+D W+ G    E++  
Sbjct: 164 -----TQL---------------VVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK 203

Query: 343 RTPFAAPSNETTLRNIVK-------------------KPLTFPTQSPS---------SMS 374
           +  F   S    L  I K                   K  TF     +         S+S
Sbjct: 204 KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLS 263

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           + +  DL++ LL  DP  R+     A D   HP+F
Sbjct: 264 D-NGFDLLNRLLTYDPAKRI----SAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 50/252 (19%), Positives = 95/252 (37%), Gaps = 68/252 (26%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  IL+ ++HP +  L   F  + F+C+++      DL+   +    +  ++        
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKT-DLYC--YLAAKRNIAICDILAIER 189

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
            VL A++YLH   II+RD+K EN+ +   G + L DF  +     I A            
Sbjct: 190 SVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA------------ 237

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N+++G                        + GT    +PE+ 
Sbjct: 238 ------------------NKYYG------------------------WAGTIATNAPELL 255

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKK----PLTFPT 367
           +   +G AVD W+ GI ++EM                  ++  ++ I+++    P  FP 
Sbjct: 256 ARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315

Query: 368 QSPSSMSEYHAR 379
            + +++ E +  
Sbjct: 316 DAQANLDEIYIG 327

Length = 391

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 82/355 (23%), Positives = 126/355 (35%), Gaps = 105/355 (29%)

Query: 86  RRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
            ++G G   TVY  +  +N       G     L A+KV++ +  E       A  E  +L
Sbjct: 11  EKLGEGSYATVYKGISRIN-------GQ----LVALKVISMKTEEGVP--FTAIREASLL 57

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           K L H  +  L+           V E+    DL     + P       + R +  ++L  
Sbjct: 58  KGLKHANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHP-YNVRLFMFQLLRG 115

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           L Y+H   I++RDLKP+N+L+   G + L+DF L+  + +IP               SQT
Sbjct: 116 LAYIHGQHILHRDLKPQNLLISYLGELKLADFGLAR-AKSIP---------------SQT 159

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS- 322
           Y+ +                                       V T  Y  P+V  G + 
Sbjct: 160 YSSE---------------------------------------VVTLWYRPPDVLLGATD 180

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSN----------------ETTLRNIVK----KP 362
           + +A+D W  G    EM+ G+  F   S+                E T   + K    KP
Sbjct: 181 YSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240

Query: 363 LTFPTQSPSSMSE--------YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             F    P  +            A DL S +L   P +R+     A D   HP+F
Sbjct: 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRI----SAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 21/154 (13%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV---NKEVLEKKKKVHRAEMEKKILK 144
           +G G  GTVY C L N+ +         L A+K V      VL  +K+  + + E  +LK
Sbjct: 8   LGKGAYGTVY-CGLTNQGQ---------LIAVKQVELDTSNVLAAEKEYEKLQEEVDLLK 57

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF-SLTSARF--YAAEVL 201
            L H  +          N   I MEF  GG + S+       RF  L    F  Y  ++L
Sbjct: 58  SLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSIL-----NRFGPLPEPVFCKYTKQIL 112

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
             + YLH   +++RD+K  NV++  +G I L DF
Sbjct: 113 DGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDF 146

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 61/276 (22%), Positives = 95/276 (34%), Gaps = 78/276 (28%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F+L   +G G  G VY      K R  +  +   +  M V   E  E K++++  +    
Sbjct: 8   FELVELVGNGTYGQVY------KGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK---- 57

Query: 142 ILKMLDHPFLPTLYAEFEASNFS------CIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
             K   H  + T Y  F   N         +VMEFC  G +  L               +
Sbjct: 58  --KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 115

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
              E+L  L +LH   +I+RD+K +NVL+  +  + L DF +                  
Sbjct: 116 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV------------------ 157

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                        S +L R                           R  +F+GT  +++P
Sbjct: 158 -------------SAQLDR------------------------TVGRRNTFIGTPYWMAP 180

Query: 316 EVASGGSHGNAV-----DWWAFGIFIYEMIYGRTPF 346
           EV +   + +A      D W+ GI   EM  G  P 
Sbjct: 181 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
           E  I++  DHP +  L       N   IVME    G+L   R      ++SL  A    Y
Sbjct: 57  EAYIMRQFDHPHIVKLIGVIT-ENPVWIVMELAPLGEL---RSYLQVNKYSLDLASLILY 112

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + ++  AL YL     ++RD+   NVLV S   + L DF LS
Sbjct: 113 SYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS 154

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 62/296 (20%), Positives = 105/296 (35%), Gaps = 85/296 (28%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L H  + TL+          +V E+        L +       S+ + + +  
Sbjct: 53  EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCG--NLMSMHNVKIFMF 110

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++L  L Y H   I++RDLKP+N+L+   G + L+DF L+                 A S
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLA----------------RAKS 154

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
             ++TY+ +  T   R               P+ L             +G+ EY +P   
Sbjct: 155 VPTKTYSNEVVTLWYR--------------PPDVL-------------LGSTEYSTP--- 184

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------------------ 360
                   +D W  G  +YEM  GR  F   + +  L  I +                  
Sbjct: 185 --------IDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236

Query: 361 -KPLTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            +   FP      +  +  R      DL+S LL  +  +R+ ++        H +F
Sbjct: 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL----RHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 51.5 bits (123), Expect = 3e-07
 Identities = 50/250 (20%), Positives = 86/250 (34%), Gaps = 85/250 (34%)

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           ++ + + +  ++L  L Y H   +++RDLKP+N+L+   G + L+DF L+          
Sbjct: 102 NMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLA---------- 151

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                  A S  ++TY+ +                                       V 
Sbjct: 152 ------RAKSIPTKTYSNE---------------------------------------VV 166

Query: 309 THEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------- 360
           T  Y  P++  G + +   +D W  G   YEM  GR  F   + E  L  I +       
Sbjct: 167 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226

Query: 361 ------------KPLTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAAD 402
                       K   +P      +  +  R      +L+S LL  +   R+     A +
Sbjct: 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI----SAEE 282

Query: 403 VKTHPFFKGL 412
              HP+F  L
Sbjct: 283 AMKHPYFHCL 292

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 51.6 bits (123), Expect = 3e-07
 Identities = 82/356 (23%), Positives = 122/356 (34%), Gaps = 103/356 (28%)

Query: 87  RIGAGDIGTVYL--CSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK 144
           ++G G   TVY     +N K           L A+KV+  +  E++     A  E  +LK
Sbjct: 12  KLGEGSYATVYKGKSKVNGK-----------LVALKVIRLQ--EEEGTPFTAIREASLLK 58

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
            L H  +  L+          +V E+    DL     K P       + + +  ++L  L
Sbjct: 59  GLKHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGG-LHPENVKLFLFQLLRGL 116

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
            Y+H   I++RDLKP+N+L+   G + L+DF L+                 A S  S TY
Sbjct: 117 SYIHQRYILHRDLKPQNLLISDTGELKLADFGLA----------------RAKSVPSHTY 160

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
           + +  T   R  +   GS +  T                                     
Sbjct: 161 SNEVVTLWYRPPDVLLGSTEYST------------------------------------- 183

Query: 325 NAVDWWAFGIFIYEMIYGRTPFA----------------APSNETTLRNIVK----KPLT 364
             +D W  G    EMI G   F                    NE T   +      KP  
Sbjct: 184 -CLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER 242

Query: 365 FPTQSPSSMSEY--------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           F   SP ++ +         HA DL S LL   P NRL ++       +H +F  L
Sbjct: 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL----SHEYFSDL 294

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 51.6 bits (123), Expect = 4e-07
 Identities = 65/274 (23%), Positives = 98/274 (35%), Gaps = 79/274 (28%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCL-YAMKVVNKEVLEKKKKVHRAEME 139
           DF+    +GAG+ G V+  S          H+P  L  A K+++ E+  K    ++   E
Sbjct: 6   DFEKISELGAGNGGVVFKVS----------HKPSGLIMARKLIHLEI--KPAIRNQIIRE 53

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFY 196
            ++L   + P++   Y  F +     I ME   GG L  +  K    P +     S    
Sbjct: 54  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--- 110

Query: 197 AAEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
              V+  L YL     I++RD+KP N+LV S G I L DF +S                 
Sbjct: 111 --AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----------------- 151

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                           +    N F G++                            Y+SP
Sbjct: 152 -------------GQLIDSMANSFVGTR---------------------------SYMSP 171

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
           E   G  +    D W+ G+ + EM  GR P   P
Sbjct: 172 ERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 17/155 (10%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEMEKKILK 144
            +IG G+ G VY   L                A+K        + K+K  +   E +ILK
Sbjct: 1   EKIGKGNFGDVYKGVLKGN----------TEVAVKTCRSTLPPDLKRKFLQ---EAEILK 47

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVA 203
             DHP +  L           IVME   GG L + LR K+   R ++      + +    
Sbjct: 48  QYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAG 105

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +EYL     I+RDL   N LV  +  + +SDF +S
Sbjct: 106 MEYLESKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 18/163 (11%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F+L   +G G  G VY      K R  +  +   +  M V   E  E K +++   M KK
Sbjct: 18  FELVEVVGNGTYGQVY------KGRHVKTGQLAAIKVMDVTEDEEEEIKLEIN---MLKK 68

Query: 142 ILKMLDHPFLPTLYAEFEASNFS------CIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                 H  + T Y  F   +         +VMEFC  G +  L               +
Sbjct: 69  YSH---HRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY 125

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              E+L  L +LH   +I+RD+K +NVL+  +  + L DF +S
Sbjct: 126 ICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 19/114 (16%)

Query: 135 RAEMEKKILKMLDHP--------FLP-TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-P 184
           RA  E  ++K+++H         F P     EF+      +VME     +L  +      
Sbjct: 61  RAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVY---LVMELMDA-NLCQVIQMDLD 116

Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           H+R S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 117 HERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 44/162 (27%), Positives = 64/162 (39%), Gaps = 21/162 (12%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           ++  L   IG G+ G V L     +               KV  K + +          E
Sbjct: 6   KELKLGATIGKGEFGDVMLGDYRGQ---------------KVAVKCLKDDSTAAQAFLAE 50

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARF--Y 196
             ++  L HP L  L       N   IV E+ + G L   LR +    R  +T A+   +
Sbjct: 51  ASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG---RAVITLAQQLGF 107

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A +V   +EYL     ++RDL   NVLV  D    +SDF L+
Sbjct: 108 ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLA 149

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 67/308 (21%), Positives = 108/308 (35%), Gaps = 79/308 (25%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G VY   L     +          A+K + +    K ++  R E E  ++  L 
Sbjct: 13  LGEGAFGKVYKGELTGPNERL----SATSVAIKTLKENAEPKVQQEFRQEAE--LMSDLQ 66

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHK-----------RFSLTSARF 195
           HP +  L         +C++ E+ + GDLH  L    PH            + SL  + F
Sbjct: 67  HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDF 126

Query: 196 Y--AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
              A ++   +EYL     ++RDL   N LV     + +SDF LS               
Sbjct: 127 LHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLS--------------- 171

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                     Y+  Y    S+            +L P R                   ++
Sbjct: 172 -------RDIYSADYYRVQSK------------SLLPVR-------------------WM 193

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTL-----RNIVKKPLTFPT 367
            PE    G      D W+FG+ ++E+  YG  P+   SN+  +     R ++  P   P 
Sbjct: 194 PPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPA 253

Query: 368 QSPSSMSE 375
           +  + M E
Sbjct: 254 RVYALMIE 261

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
           M D+P    LY          ++M++   GDL  L  K+   + S    +    +++ AL
Sbjct: 65  MKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEAL 122

Query: 205 EYLHMLGIIYRDLKPENVL-VRSDGHIMLSDFDLS 238
             LH   II+ D+K ENVL  R+   I L D+ L 
Sbjct: 123 NDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157

Length = 267

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 50.8 bits (121), Expect = 5e-07
 Identities = 49/243 (20%), Positives = 87/243 (35%), Gaps = 69/243 (28%)

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHK--------- 186
           + E  ++  L HP +  L          C++ E+ + GDLH  L  + PH          
Sbjct: 55  QQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDED 114

Query: 187 ---RFSLTSARFY--AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
              + SL    F   A ++   +EYL     +++DL   N+L+    H+ +SD  LS   
Sbjct: 115 GTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLS--- 171

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                               + Y+  Y     +            +L P R         
Sbjct: 172 -------------------REIYSADYYRVQPK------------SLLPIR--------- 191

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
                     ++ PE    G   +  D W+FG+ ++E+  +G  P+   SN+  +  + K
Sbjct: 192 ----------WMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK 241

Query: 361 KPL 363
           + L
Sbjct: 242 RQL 244

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 13/151 (8%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G+ G V+  +L +K             A+K   KE L ++ K+ +   E +ILK  D
Sbjct: 3   LGKGNFGEVFKGTLKDKTP----------VAVKTC-KEDLPQELKI-KFLSEARILKQYD 50

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HP +  L           IVME   GGD  S   K+  +  +    +F A +    + YL
Sbjct: 51  HPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKF-ALDAAAGMAYL 109

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                I+RDL   N LV  +  + +SDF +S
Sbjct: 110 ESKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 50.9 bits (122), Expect = 6e-07
 Identities = 63/265 (23%), Positives = 91/265 (34%), Gaps = 88/265 (33%)

Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DLH +         S    + +  ++L  L+YLH  GI++RD+KP N+LV S+  + + D
Sbjct: 89  DLHKIIVSPQP--LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICD 146

Query: 235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
           F L+        VE P  S       +Q    QY                          
Sbjct: 147 FGLA-------RVEEPDESKHM----TQEVVTQY-------------------------- 169

Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA----- 348
                            Y +PE+  G  H  +AVD W+ G    E++  R  F A     
Sbjct: 170 -----------------YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ 212

Query: 349 -----------PSNET-----------TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL 386
                      PS E             LR   K P      + SS + + A  L+  +L
Sbjct: 213 QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRML 272

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKG 411
             DP  R+     AAD   HP+   
Sbjct: 273 VFDPDKRI----SAADALAHPYLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 62/272 (22%), Positives = 96/272 (35%), Gaps = 89/272 (32%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+C   DL SL    P   FS +  +    ++L  L+YLH   II+RDLK  N+L+ 
Sbjct: 85  LVMEYCEQ-DLASLLDNMPTP-FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT 142

Query: 226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI 285
             G + ++DF L+                                       R +G    
Sbjct: 143 DKGCLKIADFGLA---------------------------------------RTYGL-PA 162

Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRT 344
           + +TP                V T  Y +PE+  G  ++  A+D WA G  + E++  + 
Sbjct: 163 KPMTPK---------------VVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP 207

Query: 345 PFAAPS---------------NETTLRNIVKKPL----TFPTQSPSSMSEYH-------A 378
                S               NE+        PL    T P Q P +  ++         
Sbjct: 208 LLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQ-PYNNLKHKFPWLSEAG 266

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             L++ LL  DP  R      A +     +FK
Sbjct: 267 LRLLNFLLMYDPKKRA----TAEEALESSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 78/358 (21%), Positives = 126/358 (35%), Gaps = 115/358 (32%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKV-HRAEMEKKILKM 145
           +IG G  GTV+      K +    HE   + A+K V  +  +  + V   A  E  +LK 
Sbjct: 7   KIGEGTYGTVF------KAKNRETHE---IVALKRVRLD--DDDEGVPSSALREICLLKE 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF--------SLTSARFYA 197
           L H  +  LY    +     +V E+C           Q  K++             + + 
Sbjct: 56  LKHKNIVRLYDVLHSDKKLTLVFEYCD----------QDLKKYFDSCNGDIDPEIVKSFM 105

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            ++L  L + H   +++RDLKP+N+L+  +G + L+DF L+                   
Sbjct: 106 FQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLA------------------- 146

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R + AE V         T  Y  P+V
Sbjct: 147 --------------------RAFG-------IPVRCYSAEVV---------TLWYRPPDV 170

Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
             G   +  ++D W+ G    E+     P F     +  L+ I +   T   +S   +S+
Sbjct: 171 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230

Query: 376 ---------YHA---------------RDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                    Y A               RDL+  LL  +P  R+     A +   HP+F
Sbjct: 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI----SAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 50.0 bits (120), Expect = 9e-07
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 93  IGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP 152
           I  +      N              A+K +N +    K+ +   + E    + L HP + 
Sbjct: 15  IVHLAKHKPTNTL-----------VAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNIL 62

Query: 153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGI 212
                F   +   +V    + G    L      +     +  F   +VL AL+Y+H  G 
Sbjct: 63  PYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGF 122

Query: 213 IYRDLKPENVLVRSDGHIMLSDF 235
           I+R +K  ++L+  DG ++LS  
Sbjct: 123 IHRSVKASHILLSGDGKVVLSGL 145

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHK--QPHKRF 188
           E E  ILK L DHP +   Y  +   +        +V+E C+GG +  L     +  +R 
Sbjct: 62  EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERM 121

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                 +   E L+ L++LH+   I+RD+K  N+L+ ++G + L DF +S
Sbjct: 122 EEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD--LSLCS 241
           P  +  +   +    +VL  L  LH +GI++RD+KPEN+LV  DG + + DF   + +C+
Sbjct: 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCT 361

Query: 242 ----NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRF 279
               N +  +  P  SP       Q+  R  +  ++  L+ F
Sbjct: 362 GINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPF 403

Length = 507

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 135 RAEMEKKILKMLDHP----FLPTLYAEFEASNFS--CIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E ++LK + H      L     +     F    +VM F  G DL  L     H++ 
Sbjct: 60  RAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKL---MKHEKL 115

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S    +F   ++L  L+Y+H  GII+RDLKP N+ V  D  + + DF L+
Sbjct: 116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 51.0 bits (122), Expect = 1e-06
 Identities = 63/303 (20%), Positives = 101/303 (33%), Gaps = 64/303 (21%)

Query: 118 AMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS-NFSCIVMEFCSGGDL 176
           A+K++  +  E++ +  R   E  +   L HP +  L    EA       V E+  G  L
Sbjct: 7   AIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTL 66

Query: 177 HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLS 233
             +           T       +VL AL   H  GI++RDLKP+N++V   G   H  + 
Sbjct: 67  REVLAADGALPAGETGR--LMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVL 124

Query: 234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL 293
           DF +                                                 TL P   
Sbjct: 125 DFGIG------------------------------------------------TLLPGVR 136

Query: 294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET 353
                   R+   +GT  Y +PE   G       D +A+G+   E + G+      S   
Sbjct: 137 DADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGAS--- 193

Query: 354 TLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
            +  I+ + L+      P  ++ +    ++   LNKDP  R  S    A+      F+ L
Sbjct: 194 -VAEILYQQLSPVDVSLPPWIAGHPLGQVLRKALNKDPRQRAASAPALAER-----FRAL 247

Query: 413 NFA 415
              
Sbjct: 248 ELC 250

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 38/184 (20%)

Query: 88  IGAGDIGTVYLCSLNNKYR--QDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK--KIL 143
           +G G+ G+V LC    +Y   QD   E        VV  + L+     H  + E+  +IL
Sbjct: 12  LGKGNFGSVELC----RYDPLQDNTGE--------VVAVKKLQHSTAEHLRDFEREIEIL 59

Query: 144 KMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSL----RHKQPHKRFSLTSA 193
           K L H  +     +++   +S       +VME+   G L       R +  H++  L   
Sbjct: 60  KSLQHDNI----VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLL--- 112

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL---CSNAIPAVESP 250
             YA+++   +EYL     ++RDL   N+LV S+  + + DF L+           V  P
Sbjct: 113 --YASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREP 170

Query: 251 ASSP 254
             SP
Sbjct: 171 GESP 174

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 13/158 (8%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F L R++G+G  G V+     N+ R           A+K++  + L K++     + E 
Sbjct: 7   EFTLERKLGSGYFGEVWEGLWKNRVR----------VAIKILKSDDLLKQQDF---QKEV 53

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           + LK L H  L +L+A         I+ E    G L +       +   + S    A +V
Sbjct: 54  QALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQV 113

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              + YL     I+RDL   N+LV  D    ++DF L+
Sbjct: 114 AEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLA 151

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 17/154 (11%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G+G  G V+L     + +           A+K +N+  + ++  +     E K++  
Sbjct: 10  KELGSGQFGVVHLGKWRAQIK----------VAIKAINEGAMSEEDFIE----EAKVMMK 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYAAEVLVAL 204
           L HP L  LY          IV EF   G L + LR +Q     S         +V   +
Sbjct: 56  LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK--LSKDMLLSMCQDVCEGM 113

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           EYL     I+RDL   N LV S G + +SDF ++
Sbjct: 114 EYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMT 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVM-EFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E ++L+ L HP +  L         +C+V+ ++ S  DL++    +  +   L      A
Sbjct: 210 EARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRS--DLYTYLGARL-RPLGLAQVTAVA 266

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
            ++L A++Y+H  GII+RD+K ENVLV     I L DF
Sbjct: 267 RQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDF 304

Length = 461

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 101/260 (38%)

Query: 181 HKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC 240
            K+P         + Y  ++L +L+++H  GI +RD+KPEN+L++ D  + L+DF     
Sbjct: 93  RKRP---LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDD-ILKLADF----- 143

Query: 241 SNAIPAVESPASSPEAASPRS----QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVA 296
                            S R       YT   STR                         
Sbjct: 144 ----------------GSCRGIYSKPPYTEYISTRW------------------------ 163

Query: 297 EPVAARSCSFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE--- 352
                          Y +PE + + G +G  +D WA G   +E++     F   +NE   
Sbjct: 164 ---------------YRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG-TNELDQ 207

Query: 353 -TTLRNIV----------KKPLT-----FPTQSPS-------SMSEYHARDLISGLLNKD 389
              + +++           +        FP++  +       + S     DL+  LL  D
Sbjct: 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAE-GLDLLKKLLAYD 266

Query: 390 PCNRLGSKRGAADVKTHPFF 409
           P  R+ +K+       HP+F
Sbjct: 267 PDERITAKQAL----RHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 73/334 (21%), Positives = 118/334 (35%), Gaps = 82/334 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           RD  L   +G G  G V+L   +N    QD+      L A+K + KE  E  ++  + E 
Sbjct: 5   RDIVLKWELGEGAFGKVFLAECHNLLPEQDK-----MLVAVKAL-KEASESARQDFQREA 58

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKR---------- 187
           E  +L +L H  +   Y          +V E+   GDL+  LR   P  +          
Sbjct: 59  E--LLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP 116

Query: 188 --FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
              +L      A+++   + YL  L  ++RDL   N LV     + + DF +S       
Sbjct: 117 GQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMS------- 169

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                                 YST   R   R        T+ P R    E +  R  +
Sbjct: 170 -------------------RDIYSTDYYRVGGR--------TMLPIRWMPPESILYRKFT 202

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
                                 D W+FG+ ++E+  YG+ P+   SN   +  I + + L
Sbjct: 203 -------------------TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGREL 243

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK 397
             P   P  +       ++ G   ++P  R+  K
Sbjct: 244 ERPRTCPPEVY-----AIMQGCWQREPQQRMVIK 272

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 67/285 (23%), Positives = 104/285 (36%), Gaps = 74/285 (25%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCL-YAMKVVNKEVLEKKKKVHRAEME 139
           DF+    +GAG+ G V       K +    H+P  L  A K+++ E+  K    ++   E
Sbjct: 6   DFERISELGAGNGGVVT------KVQ----HKPSGLIMARKLIHLEI--KPAIRNQIIRE 53

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            ++L   + P++   Y  F +     I ME   GG L  +  +   KR         +  
Sbjct: 54  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIA 111

Query: 200 VLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           VL  L YL     I++RD+KP N+LV S G I L DF +S                    
Sbjct: 112 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS-------------------- 151

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                        +    N F G++                            Y+SPE  
Sbjct: 152 ----------GQLIDSMANSFVGTR---------------------------SYMSPERL 174

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
            G  +    D W+ G+ + E+  GR P   P +   L  I  +P+
Sbjct: 175 QGTHYSVQSDIWSMGLSLVELAIGRYPI-PPPDAKELEAIFGRPV 218

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 70/331 (21%), Positives = 113/331 (34%), Gaps = 82/331 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK--KKKVHRAE 137
               L R +G G  G V+L    +   ++       L A+K + KE      +K   R  
Sbjct: 5   DTIVLKRELGEGAFGKVFLGECYHLEPEND----KELVAVKTL-KETASNDARKDFER-- 57

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RH----------KQPH 185
            E ++L    H  +   Y      +   +V E+   GDL+     H            P 
Sbjct: 58  -EAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPM 116

Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
              +L+     A ++   + YL     ++RDL   N LV  D  + + DF +S       
Sbjct: 117 GELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMS------- 169

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                             YT  Y         R  G     T+ P R             
Sbjct: 170 ---------------RDVYTTDYY--------RVGGH----TMLPIR------------- 189

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
                 ++ PE           D W+FG+ ++E+  YG+ P+   SNE  +  I + + L
Sbjct: 190 ------WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLL 243

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
             P   PS +      D++ G   +DP  R+
Sbjct: 244 QRPRTCPSEV-----YDIMLGCWKRDPQQRI 269

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 16/154 (10%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           RIG G+ G V+    + + R D         A+K   +E L    K  +   E +ILK  
Sbjct: 2   RIGRGNFGEVF----SGRLRADN-----TPVAVKSC-RETLPPDLKA-KFLQEARILKQY 50

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-SLTSARFYAAEVLVAL 204
            HP +  L           IVME   GGD  + LR + P  +   L      AA     +
Sbjct: 51  SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAA---AGM 107

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           EYL     I+RDL   N LV     + +SDF +S
Sbjct: 108 EYLESKHCIHRDLAARNCLVTEKNVLKISDFGMS 141

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 19/171 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYR------QDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           L  ++G G  G V+LC              +   +P  L A+K++  +V +  +     E
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPV-LVAVKMLRADVTKTARNDFLKE 67

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-------- 188
           +  KI+  L +P +  L     + +  C++ E+   GDL+  L  ++    F        
Sbjct: 68  I--KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPS 125

Query: 189 -SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            S+ +  + A ++   ++YL  L  ++RDL   N LV +   I ++DF +S
Sbjct: 126 VSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMS 176

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           +++GAG  G V++   NN              + KV  K +      V     E  ++K 
Sbjct: 12  KKLGAGQFGEVWMGYYNN--------------STKVAVKTLKPGTMSVQAFLEEANLMKT 57

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L H  L  LYA         I+ E+ + G L          +  L     ++A++   + 
Sbjct: 58  LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 117

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           Y+     I+RDL+  NVLV       ++DF L+
Sbjct: 118 YIERKNYIHRDLRAANVLVSESLMCKIADFGLA 150

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 47.6 bits (113), Expect = 5e-06
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 12/125 (9%)

Query: 118 AMKVVNKEVLEKKKKVHRAEM--EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGD 175
           A+KV+  E     +K  R EM  E +I+  LD+P++  +    EA     +VME  SGG 
Sbjct: 26  AIKVLKNE----NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEAL-MLVMEMASGGP 80

Query: 176 LHSLRHKQPHKRFSLTSARFYAA--EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
           L+        K+  +T +       +V + ++YL     ++RDL   NVL+ +  +  +S
Sbjct: 81  LNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKIS 137

Query: 234 DFDLS 238
           DF LS
Sbjct: 138 DFGLS 142

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 48.2 bits (114), Expect = 5e-06
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 127 LEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLR 180
            + +    RA  E  ++K ++H  + +L   F      E      +VME         ++
Sbjct: 54  FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQ 113

Query: 181 HKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 114 MELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 47.6 bits (113), Expect = 5e-06
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCC-LYAMKVVNKEVLEKKKKVHRAEMEKKILK 144
           R +G G  G V L      Y  D  ++    + A+K + +E  ++     + E+   ILK
Sbjct: 10  RVLGEGHFGKVSL------YCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEI--NILK 61

Query: 145 MLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
            L H  +         +      ++ME+     L SLR   P  + +L     +A ++  
Sbjct: 62  TLYHENIVKYKGCCSEQGGKGLQLIMEYVP---LGSLRDYLPKHKLNLAQLLLFAQQICE 118

Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
            + YLH    I+RDL   NVL+ +D  + + DF L   + A+P
Sbjct: 119 GMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGL---AKAVP 158

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 38/179 (21%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRG-----HEPCCLYAMKVVNKEV-LEKKKKVHRAEME 139
           R IG G  G V+         Q R      +EP  + A+K++ +E   + +    R   E
Sbjct: 11  RDIGQGAFGRVF---------QARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR---E 58

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSL----TSAR 194
             ++   DHP +  L          C++ E+ + GDL+  LRH+ P  + SL    +SAR
Sbjct: 59  AALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSAR 118

Query: 195 FY---------------AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                            A +V   + YL     ++RDL   N LV  +  + ++DF LS
Sbjct: 119 KCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 177

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 47.6 bits (113), Expect = 5e-06
 Identities = 66/272 (24%), Positives = 103/272 (37%), Gaps = 60/272 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IGAG+ G V    L    +++         A+K +     EK+++   +E    I+   D
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSE--ASIMGQFD 63

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HP +  L      S    I+ EF   G L S   +Q   +F++         +   ++YL
Sbjct: 64  HPNIIHLEGVVTKSRPVMIITEFMENGALDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL 122

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
             +  ++RDL   N+LV S+    +SDF LS        +E   S P        TYT  
Sbjct: 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLS------RFLEDDTSDP--------TYTSS 168

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                        G K      P R    E +A R  +                   +A 
Sbjct: 169 ------------LGGK-----IPIRWTAPEAIAYRKFT-------------------SAS 192

Query: 328 DWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
           D W++GI ++E M YG  P+   SN+  +  I
Sbjct: 193 DVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 84/365 (23%), Positives = 126/365 (34%), Gaps = 116/365 (31%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR--------AEM 138
           +IG G  G VY      K R             +V N+ +  KK ++ +        A  
Sbjct: 9   KIGEGTYGVVY------KARD------------RVTNETIALKKIRLEQEDEGVPSTAIR 50

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS--LTSARFY 196
           E  +LK + H  +  L     +     +V E+    DL   +H      F+      + Y
Sbjct: 51  EISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL---DLDLKKHMDSSPDFAKNPRLIKTY 107

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
             ++L  + Y H   +++RDLKP+N+L+ R    + L+DF L+                 
Sbjct: 108 LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA----------------- 150

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                                 R FG        P R F  E V         T  Y +P
Sbjct: 151 ----------------------RAFG-------IPVRTFTHEVV---------TLWYRAP 172

Query: 316 EVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNIV 359
           E+  G  H    VD W+ G    EM+  +  F   S               NE T   + 
Sbjct: 173 EILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVT 232

Query: 360 KKP---LTFPTQSPSSMS------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             P     FP   P  ++      E    DL+S +L  DP  R+ + R A +   H +FK
Sbjct: 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI-TARAALE---HEYFK 288

Query: 411 GLNFA 415
            L  A
Sbjct: 289 DLGDA 293

Length = 294

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 39/174 (22%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN--KEVLEKKKKVHRAEME 139
           +++   IG G  G VY   + NK       +   L A+K+++   +V E+       E E
Sbjct: 24  WEIIETIGKGTYGKVY--KVTNK-------KDGSLAAVKILDPISDVDEE------IEAE 68

Query: 140 KKILKML-DHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSL---------RHKQP 184
             IL+ L +HP +   Y  F  ++        +V+E C+GG +  L         R  + 
Sbjct: 69  YNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEA 128

Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              + L  A       L+ L++LH   II+RD+K  N+L+ ++G + L DF +S
Sbjct: 129 MISYILYGA-------LLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 56/257 (21%), Positives = 82/257 (31%), Gaps = 92/257 (35%)

Query: 182 KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
           + P +     + + +  ++L  + + H  G+++RDLKP+N         +L D    L  
Sbjct: 101 RGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQN---------LLVDKQKGLL- 150

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                                                     KI  L   R F   PV +
Sbjct: 151 ------------------------------------------KIADLGLGRAFSI-PVKS 167

Query: 302 RSCSFVGTHE-----YVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
                  THE     Y +PEV  G +H    VD W+ G    EM   +  F   S    L
Sbjct: 168 Y------THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL 221

Query: 356 RNIVKKPLT-----------------FPTQSPSSMS------EYHARDLISGLLNKDPCN 392
            +I K   T                 FP   P  +S           DL+  +L  DP  
Sbjct: 222 LHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAK 281

Query: 393 RLGSKRGAADVKTHPFF 409
           R+ +K       THP+F
Sbjct: 282 RISAK----AALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 47.0 bits (112), Expect = 8e-06
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)

Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A  ++ ALEYLH  L +I+RD+KP NVL+  +G + L DF +S
Sbjct: 109 AVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGIS 151

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           +GT  Y++PEV  G  +    D W+ G  +YEM     PF A S +  LR  V++     
Sbjct: 162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRYKVQR----- 215

Query: 367 TQSPSSMSEYHARDL---ISGLLNKDPCNRLG 395
            + P     Y ++DL   I  +L   P  R  
Sbjct: 216 GKYPPIPPIY-SQDLQNFIRSMLQVKPKLRPN 246

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 17/160 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           +D    + +G G  G V       KY + RG       A+K++ +  + + + +     E
Sbjct: 4   KDLTFLKELGTGQFGVV-------KYGKWRGQYDV---AIKMIKEGSMSEDEFIE----E 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYAA 198
            K++  L H  L  LY          IV E+ S G L + LR     KRF  +       
Sbjct: 50  AKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHG--KRFQPSQLLEMCK 107

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V   + YL     I+RDL   N LV   G + +SDF LS
Sbjct: 108 DVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLS 147

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 17/154 (11%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKKILKM 145
           +G+G+ GTV        Y+  +  +     A+K++  +  +   K    E+  E  +++ 
Sbjct: 3   LGSGNFGTV----KKGMYKMKKSEKTV---AVKILKNDNNDPALK---DELLREANVMQQ 52

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVAL 204
           LD+P++  +    EA ++  +VME    G L+    K  H    ++T       +V + +
Sbjct: 53  LDNPYIVRMIGICEAESW-MLVMELAELGPLNKFLQKNKHVTEKNITE---LVHQVSMGM 108

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 109 KYLEETNFVHRDLAARNVLLVTQHYAKISDFGLS 142

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 42/156 (26%), Positives = 62/156 (39%), Gaps = 16/156 (10%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L R++GAG  G V++ + N                 KV  K +            E +I+
Sbjct: 10  LERKLGAGQFGEVWMGTWNG--------------TTKVAVKTLKPGTMSPEAFLQEAQIM 55

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           K L H  L  LYA         IV E+ S G L         K+  L      AA++   
Sbjct: 56  KKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEG 115

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS 238
           + YL     I+RDL   N+LV  +  +  ++DF L+
Sbjct: 116 MAYLESRNYIHRDLAARNILV-GENLVCKIADFGLA 150

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 85/250 (34%)

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
           S+ + + +  ++L  L Y H   +++RDLKP+N+L+   G + L+DF L+          
Sbjct: 102 SMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLA---------- 151

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                  A S  ++TY+ +                                       V 
Sbjct: 152 ------RAKSVPTKTYSNE---------------------------------------VV 166

Query: 309 THEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------- 360
           T  Y  P+V  G S +   +D W  G   +EM  GR  F   + E  L  I +       
Sbjct: 167 TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226

Query: 361 ------------KPLTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAAD 402
                       K   FP   P  +  +  R      +L++  L  +   R+     A +
Sbjct: 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI----SAEE 282

Query: 403 VKTHPFFKGL 412
              H +F+ L
Sbjct: 283 AMKHAYFRSL 292

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 114 CCLYAMKVVNKEVLEKKKK-----VH--RAEMEKKILKMLDHPFLPTLYAEFEAS----N 162
           C  Y  ++  K  ++K  +     +H  R   E ++LK + H  +  L   F  +    N
Sbjct: 32  CSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91

Query: 163 FSCI-VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
           F+ + ++    G DL+++   Q   + S    +F   ++L  L+Y+H  GII+RDLKP N
Sbjct: 92  FNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSN 148

Query: 222 VLVRSDGHIMLSDFDLS 238
           V V  D  + + DF L+
Sbjct: 149 VAVNEDCELRILDFGLA 165

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 35/169 (20%)

Query: 83  DLHR--RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV----NKEVLEKKKKVHRA 136
           DL     IG+G  G VY      ++++  GH    + A+K +    NKE  E K    R 
Sbjct: 16  DLENLGEIGSGTCGQVYKM----RFKKT-GH----VMAVKQMRRTGNKE--ENK----RI 60

Query: 137 EMEKKI-LKMLDHPFLPTLYAEF--EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFSLTS 192
            M+  + LK  D P++   Y  F  ++  F C+ +M  C   D    R + P     L  
Sbjct: 61  LMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCL--DKLLKRIQGPIPEDILGK 118

Query: 193 ARFYAAEVLVALEYL---HMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                  ++ AL YL   H  G+I+RD+KP N+L+ + G++ L DF +S
Sbjct: 119 M---TVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGIS 162

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 25/159 (15%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGH-----EPCCLYAMKVVNKEVLEKKKKVHRAEM--EK 140
           +G+G  GTVY           +G      E   +    V  K + E+       E+  E 
Sbjct: 15  LGSGAFGTVY-----------KGVWIPEGEKVKI---PVAIKVLREETSPKANKEILDEA 60

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYAAE 199
            ++  +DHP +  L     +S    ++ +    G L  L + +             +  +
Sbjct: 61  YVMASVDHPHVVRLLGICLSSQV-QLITQLMPLGCL--LDYVRNHKDNIGSQYLLNWCVQ 117

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   + YL    +++RDL   NVLV++  H+ ++DF L+
Sbjct: 118 IAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 14/155 (9%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L R++GAG  G V+    NN         P    A+K +    ++ K  +  A+    I+
Sbjct: 10  LLRKLGAGQFGEVWEGLWNNT-------TPV---AVKTLKPGTMDPKDFLAEAQ----IM 55

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           K L HP L  LYA         IV E    G L         +   L      AA+V   
Sbjct: 56  KKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASG 115

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + YL     I+RDL   NVLV  +    ++DF L+
Sbjct: 116 MAYLEAQNYIHRDLAARNVLVGENNICKVADFGLA 150

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 70/335 (20%), Positives = 117/335 (34%), Gaps = 83/335 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNN-KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           RD  L R +G G  G V+L    N    +D+      L A+K +    L  +K   R   
Sbjct: 5   RDIVLKRELGEGAFGKVFLAECYNLSPTKDK-----MLVAVKALKDPTLAARKDFQR--- 56

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--------------RHKQP 184
           E ++L  L H  +   Y      +   +V E+   GDL+                + +Q 
Sbjct: 57  EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 116

Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
                L+     A+++   + YL     ++RDL   N LV ++  + + DF +S      
Sbjct: 117 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS------ 170

Query: 245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC 304
                              Y+  Y         R  G     T+ P R    E +  R  
Sbjct: 171 ----------------RDVYSTDYY--------RVGG----HTMLPIRWMPPESIMYRKF 202

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KP 362
           +                      D W+FG+ ++E+  YG+ P+   SN   +  I + + 
Sbjct: 203 T-------------------TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 243

Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK 397
           L  P   P  +      D++ G   ++P  RL  K
Sbjct: 244 LERPRVCPKEVY-----DIMLGCWQREPQQRLNIK 273

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 23/64 (35%), Positives = 37/64 (57%)

Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    ++L  L++LH   +++RDLKP+N+LV S G I L+D
Sbjct: 94  DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 153

Query: 235 FDLS 238
           F L+
Sbjct: 154 FGLA 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 18/169 (10%)

Query: 86  RRIGAGDIGTVYLCSLNN-------KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
            ++G G  G V+LC  +         + ++   +   L A+KV+  +  +  ++    E+
Sbjct: 11  EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEV 70

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYA 197
             KIL  L  P +  L          C++ME+   GDL   L+           +++  +
Sbjct: 71  --KILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS 128

Query: 198 AEVLV--------ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              L+         + YL  L  ++RDL   N LV  +  I ++DF +S
Sbjct: 129 FSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMS 177

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 24/155 (15%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +  G    VYL    ++            Y +K+      EK     R   E  IL++
Sbjct: 4   KLLKGGLTNRVYLLGTKDED-----------YVLKINPSR--EKGADRER---EVAILQL 47

Query: 146 LDH--PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           L      +P + A  E+  +S ++ME+  G  L  +  ++              AE+L  
Sbjct: 48  LARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEEK------EDIAEQLAELLAK 101

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           L  L +L + + DL P N+LV     + + D++ +
Sbjct: 102 LHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 24/164 (14%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IG G  G V  CS  N    ++        A+K +     + +    R   E K+L+ LD
Sbjct: 13  IGRGAYGIV--CSAKNSETNEK-------VAIKKIAN-AFDNRIDAKRTLREIKLLRHLD 62

Query: 148 HPFLPTLY-----AEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTS--ARFYAAE 199
           H  +  +         EA N   IV E     DLH  +R  Q      L+    +++  +
Sbjct: 63  HENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRSSQT-----LSDDHCQYFLYQ 116

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
           +L  L+Y+H   +++RDLKP N+L+ ++  + + DF L+  ++ 
Sbjct: 117 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.9 bits (106), Expect = 4e-05
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 14/157 (8%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE--VLEKKKKVHRAEMEKKIL 143
           R +G G  G V LC  +     D   E   + ++K  +    + + KK++        IL
Sbjct: 10  RDLGEGHFGKVELCRYDP--EGDNTGEQVAVKSLKPESGGNHIADLKKEIE-------IL 60

Query: 144 KMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           + L H  +         +  N   ++MEF   G L     +  +K  +L     YA ++ 
Sbjct: 61  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLKYAVQIC 119

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             ++YL     ++RDL   NVLV S+  + + DF L+
Sbjct: 120 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 156

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 44.9 bits (106), Expect = 5e-05
 Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 30/178 (16%)

Query: 87  RIGAGDIGTVYLCSLNNK---------YRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           ++G G  G V+LC + N          +   +G     L A+K++  +  +  +     E
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRP--LLVAVKILRPDANKNARNDFLKE 69

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL------HSLRHKQ-------- 183
           +  KIL  L  P +  L       +  C++ E+   GDL      H L  K+        
Sbjct: 70  V--KILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVP 127

Query: 184 ---PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                   S +S    A ++   ++YL  L  ++RDL   N LV  +  I ++DF +S
Sbjct: 128 PAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMS 185

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.2 bits (104), Expect = 6e-05
 Identities = 41/151 (27%), Positives = 59/151 (39%), Gaps = 15/151 (9%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IG+G  G V+L     K               KV  K + E          E +++  L 
Sbjct: 12  IGSGQFGLVWLGYWLEK--------------RKVAIKTIREGAMSEEDFIEEAQVMMKLS 57

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           HP L  LY      +  C+V EF   G L      Q  K FS  +      +V   + YL
Sbjct: 58  HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGK-FSQETLLGMCLDVCEGMAYL 116

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +I+RDL   N LV  +  + +SDF ++
Sbjct: 117 ESSNVIHRDLAARNCLVGENQVVKVSDFGMT 147

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 27/172 (15%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
             L + +G G+ G+V    L+    QD G +      +KV  K +  K      +E+E+ 
Sbjct: 1   LKLGKILGEGEFGSVMEGQLS----QDDGSQ------LKVAVKTM--KLDIHTYSEIEEF 48

Query: 142 I-----LKMLDHPFLPTLYA-EFEASNFS-----CIVMEFCSGGDLHSL----RHKQPHK 186
           +     +K  DHP +  L    FEAS+        +++ F   GDLHS     R     +
Sbjct: 49  LSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPE 108

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  L +   +  ++ + +EYL     I+RDL   N ++R D  + ++DF LS
Sbjct: 109 KLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF---SLTSARFYAAE 199
           + L+HP +     +   S    +V+EFC  GDL + LR  +             R  A E
Sbjct: 50  RELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRM-ACE 108

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC 240
           V   L +LH    I+ DL   N  + +D  + + D+ L+L 
Sbjct: 109 VASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALE 149

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 15/155 (9%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L +++GAG  G V++   N                 KV  K + +          E  ++
Sbjct: 10  LVKKLGAGQFGEVWMGYYNGHT--------------KVAIKSLKQGSMSPEAFLAEANLM 55

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           K L HP L  LYA         I+ E+   G L          + ++      AA++   
Sbjct: 56  KQLQHPRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEG 114

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + ++     I+RDL+  N+LV       ++DF L+
Sbjct: 115 MAFIERKNYIHRDLRAANILVSETLCCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
            S    ++   ++L  L+Y+H  GII+RDLKP N+ V  D  + + DF L+  ++A
Sbjct: 114 LSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 19/157 (12%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPC-CLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           IG G  GTV      NK      H+P   + A+K +   V EK++K    +++  +++  
Sbjct: 12  IGRGAFGTV------NKML----HKPSGTIMAVKRIRSTVDEKEQKRLLMDLDV-VMRSS 60

Query: 147 DHPFLPTLY-AEFEASNFSC-IVMEF--CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           D P++   Y A F   +  C I ME    S    +   ++              A   + 
Sbjct: 61  DCPYIVKFYGALFREGD--CWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVK 118

Query: 203 ALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           AL YL   L II+RD+KP N+L+  +G+I L DF +S
Sbjct: 119 ALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 46/196 (23%), Positives = 69/196 (35%), Gaps = 65/196 (33%)

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF----DLSLCSNAIPAVES 249
           R Y  +++ A+ + H   I++RD+KPEN+L+  +  + L DF    +LS  SNA      
Sbjct: 103 RSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA------ 156

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                         YT   +TR                                      
Sbjct: 157 -------------NYTEYVATRW------------------------------------- 166

Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             Y SPE+  G  +G AVD W+ G  + E+  G+  F   S    L  I K     P   
Sbjct: 167 --YRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLP--- 221

Query: 370 PSSMSEYHARDLISGL 385
              M  +++     GL
Sbjct: 222 AEQMKLFYSNPRFHGL 237

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)

Query: 125 EVLEKKKKVHRAEMEKKIL---KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH 181
             L+++ +  R   E +I+   +      +P +Y   +  NF  IVME+  G  L  L +
Sbjct: 35  PELDERIRRERTRREARIMSRARKAGVN-VPAVY-FVDPENFI-IVMEYIEGEPLKDLIN 91

Query: 182 KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +   L          LV    LH  GII+ DL   N+++ S G I L DF L+
Sbjct: 92  SNGMEELEL----SREIGRLVGK--LHSAGIIHGDLTTSNMIL-SGGKIYLIDFGLA 141

Length = 211

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           + +GT  +++PEV     + N  D W+ GI   EM  G+ P+   S+   +R I      
Sbjct: 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPY---SDIHPMRAIF----M 210

Query: 365 FPTQSPSSMSEYHA-----RDLISGLLNKDPCNRLGSKRGAA-DVKTHPFF 409
            P + P ++S+         D +   L KDP      +R +A  +  HPF 
Sbjct: 211 IPNKPPPTLSDPEKWSPEFNDFVKKCLVKDP-----EERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 105 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 161

Query: 233 SDFDLS 238
            DF L+
Sbjct: 162 LDFGLA 167

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 66/321 (20%), Positives = 110/321 (34%), Gaps = 75/321 (23%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
             +G+G  G VY  +  +      G       A+K + K   +++KK    E    ++  
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRV---AVKTLRKGATDQEKKEFLKEAH--LMSN 55

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLR----HKQPHKRFSLTSARFYAAEV 200
            +HP +  L      +    I+ME   GGDL   LR     +      +L        +V
Sbjct: 56  FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDV 115

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGH-----IMLSDFDLSLCSNAIPAVESPASSPE 255
                YL  +  I+RDL   N LV   G+     + + DF L                  
Sbjct: 116 AKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL------------------ 157

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
           A       Y R                K+ + L P R                   +++P
Sbjct: 158 ARDIYKSDYYR----------------KEGEGLLPVR-------------------WMAP 182

Query: 316 EVASGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSM 373
           E    G      D W+FG+ ++E +  G+ P+ A +N+  L+++     L  P   P  +
Sbjct: 183 ESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKI 242

Query: 374 SEYHARDLISGLLNKDPCNRL 394
                  L++    +DP  R 
Sbjct: 243 -----YQLMTNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 17/160 (10%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D  +  ++G G  G VY   +  KY            A+K + ++ +E    V     E 
Sbjct: 7   DITMKHKLGGGQYGEVYE-GVWKKYS--------LTVAVKTLKEDTME----VEEFLKEA 53

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR--FYAA 198
            ++K + HP L  L           I+ EF + G+L  L + +   R  + +    + A 
Sbjct: 54  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL--LDYLRECNRQEVNAVVLLYMAT 111

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 151

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 80/307 (26%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVH-----RAEMEKKI 142
           +G G+ G V+L                      +V  + L+K K  +     R E++  +
Sbjct: 13  LGRGEFGEVFLAKAKG---------IEEEGGETLVLVKALQKTKDENLQSEFRRELD--M 61

Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLH-----SLRHKQPHKRFSLTSARFYA 197
            + L H  +  L      +    +++E+   GDL      +    +  K   L++ +  A
Sbjct: 62  FRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVA 121

Query: 198 --AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
              ++ + +++L     ++RDL   N LV S   + +S   LSL  +             
Sbjct: 122 LCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVS--LLSLSKD------------- 166

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                   Y  +Y              K    L P R                   +++P
Sbjct: 167 -------VYNSEY-------------YKLRNALIPLR-------------------WLAP 187

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPL--TFPTQSPSS 372
           E           D W+FG+ ++E+   G  PF   S+E  L  +    L    P   PS 
Sbjct: 188 EAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSR 247

Query: 373 MSEYHAR 379
           + +   R
Sbjct: 248 LYKLMTR 254

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 64/325 (19%), Positives = 107/325 (32%), Gaps = 84/325 (25%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI 142
           L R +G G  G V+L    N    QD+      L A+K +       +K  HR   E ++
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDK-----ILVAVKTLKDASDNARKDFHR---EAEL 60

Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-----------LRHKQPHKRFSLT 191
           L  L H  +   Y      +   +V E+   GDL+            +         + +
Sbjct: 61  LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQS 120

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
                A ++   + YL     ++RDL   N LV  +  + + DF +S             
Sbjct: 121 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS------------- 167

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                       Y+  Y         R  G     T+ P R    E +  R  +      
Sbjct: 168 ---------RDVYSTDYY--------RVGG----HTMLPIRWMPPESIMYRKFT------ 200

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLR-----NIVKKPLTF 365
                           D W+ G+ ++E+  YG+ P+   SN   +       ++++P T 
Sbjct: 201 -------------TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 247

Query: 366 PTQSPSSM-----SEYHARDLISGL 385
           P +    M      E H R  I  +
Sbjct: 248 PKEVYDLMLGCWQREPHMRLNIKEI 272

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           FD+  +IG G  G VY      K R     E   L  +++ N    EK+     A  E K
Sbjct: 9   FDIIGQIGEGTYGQVY------KARDKDTGELVALKKVRLDN----EKEGFPITAIREIK 58

Query: 142 ILKMLDHPFLPTLY---------AEF--EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
           IL+ L+H  +  L           +F  +   F  +V E+     +  L     H  FS 
Sbjct: 59  ILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFY-LVFEYMDHDLMGLLESGLVH--FSE 115

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
              + +  ++L  L Y H    ++RD+K  N+L+ + G I L+DF L+   N+
Sbjct: 116 DHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNS 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           + +GT  Y+SPE+ S   +    D WA G  +YEM   +  F A    + +  I++  L 
Sbjct: 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL- 219

Query: 365 FPTQSPSSMSEYHAR--DLISGLLNKDPCNR 393
                P    +Y     +LI+ +L+K P  R
Sbjct: 220 -----PPMPKDYSPELGELIATMLSKRPEKR 245

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|240167 cd05144, RIO2_C, RIO kinase family; RIO2, C-terminal catalytic domain

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 37/168 (22%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKV---------VNKEVLEKKKKVHR- 135
            +IG G    VYL         D    P  L   ++           ++ L  +K     
Sbjct: 21  NQIGVGKESDVYLA-------LDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWL 73

Query: 136 ------AEMEKKILKML-DHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
                 A+ E   LK L +  F +P         N   +VME+  G +L+ +R  +    
Sbjct: 74  YLSRLAAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVLED--- 126

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
                      E+L  +   +  GII+ DL   N+LV  D  I + D+
Sbjct: 127 -----PEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDW 169

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH domains may be involved in RNA recognition. RIO2 is essential for survival and is necessary for rRNA cleavage during 40S ribosomal subunit maturation. The biological substrates of RIO2 are still unknown. Length = 198

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 24/73 (32%), Positives = 38/73 (52%)

Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME  S G+L +    +     S+     ++ +V   +EYL    +++RDL   N+LV 
Sbjct: 75  IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS 134

Query: 226 SDGHIMLSDFDLS 238
            DG   +SDF L+
Sbjct: 135 EDGVAKVSDFGLA 147

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 52/227 (22%)

Query: 48  PENLSLK--PHRSSDFAYSAIRSATFG---RKTG------LTFRDFD---LHR------- 86
           P  L  K       +  Y   R        R+T       LTF  +D   LH        
Sbjct: 33  PLELIKKRARMDEEELLYRLKRLDKLKLVSRRTISYEGYQLTFSGYDALALHALVKRGIV 92

Query: 87  -----RIGAGDIGTVYLCSLNNKYRQ----DRGHEPCCLYAMKVVNKEVLEKKKK----- 132
                +IG G    VY+       +      R          +  N++ L  K+      
Sbjct: 93  EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKR--NRDYLADKEHGSWLY 150

Query: 133 VHR--AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLR--HKQPHKRF 188
           V R  AE E + L+ L +P    +     A N   +VME+  G +L+ LR   + P +  
Sbjct: 151 VSRLAAEREFEALQRL-YPEGVKVPKPI-AWNRHAVVMEYIEGVELYRLRLDVENPDEIL 208

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
                      +L  +   +  GI++ DL   N+LV  DG I++ D+
Sbjct: 209 DK---------ILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDW 246

Length = 304

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 41.6 bits (97), Expect = 5e-04
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 51  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 110 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 149

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K L H  L  LYA         IV EF   G L     +   K   L      AA
Sbjct: 51  EAQIMKKLRHDKLVPLYAVVSEEPIY-IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAA 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  I+RDL+  N+LV  +    ++DF L+
Sbjct: 110 QIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K L H  L  LYA         IV E+ S G L         +   L +    AA
Sbjct: 51  EAQIMKKLRHDKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAA 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V   + Y+  +  I+RDL+  N+LV       ++DF L+
Sbjct: 110 QVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +V T  Y +PE+     H N  VD W+ G  + E++ GRT F    +   L+ I++   T
Sbjct: 177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236

Query: 365 FPTQSPSSMSEYHARDLISGL 385
              +    +S   AR+ I  L
Sbjct: 237 PGAELLKKISSESARNYIQSL 257

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 15/155 (9%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L +++GAG  G V++ + N                 KV  K +      V     E  ++
Sbjct: 10  LEKKLGAGQFGEVWMATYNKH--------------TKVAVKTMKPGSMSVEAFLAEANVM 55

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           K L H  L  L+A         I+ EF + G L          +  L     ++A++   
Sbjct: 56  KTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 114

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + ++     I+RDL+  N+LV +     ++DF L+
Sbjct: 115 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 41.8 bits (98), Expect = 6e-04
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 3/99 (3%)

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E  ILK + H  +  L   +   +  C+VM          +    P     L  A   
Sbjct: 134 GREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGP---LPLEQAITI 190

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
              +L AL YLH  GII+RD+K EN+ +    + +L DF
Sbjct: 191 QRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDF 229

Length = 392

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 20/163 (12%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +     IG G  G V  CS  +K    +        A+K +     E +    R   E 
Sbjct: 6   RYQNLSYIGEGAYGMV--CSATHKPTGVK-------VAIKKI--SPFEHQTFCQRTLREI 54

Query: 141 KILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           KIL+   H  +  +        FE+ N   IV E     DL+ L   Q     S    ++
Sbjct: 55  KILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQH---LSNDHIQY 110

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  ++L  L+Y+H   +++RDLKP N+L+ ++  + + DF L+
Sbjct: 111 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLA 153

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP---SNETTLRNIVKK 361
           S VGT  Y  PE+     +G   D WAFG  +Y+M   + PF +    S  T +   V +
Sbjct: 172 SVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           PL      P  M      D+I+  L  D   R
Sbjct: 232 PL------PEGMYSEDVTDVITSCLTPDAEAR 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           + +PE AS G+     D W+FGI +YEM  YG+ P+   +N      I
Sbjct: 170 WTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 66/291 (22%), Positives = 104/291 (35%), Gaps = 65/291 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           IGAG+ G V+   L    R++         A+K +     EK+++   +E    I+    
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVA------VAIKTLKPGYTEKQRQDFLSE--ASIMGQFS 64

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALEY 206
           H  +  L         + I+ E+   G L   LR       FS          +   ++Y
Sbjct: 65  HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKY 122

Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTR 266
           L  +  ++RDL   N+LV S+    +SDF LS               PE       TYT 
Sbjct: 123 LSDMNYVHRDLAARNILVNSNLECKVSDFGLS---------RVLEDDPEG------TYTT 167

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
                         G K      P R                   + +PE  +     +A
Sbjct: 168 S-------------GGK-----IPIR-------------------WTAPEAIAYRKFTSA 190

Query: 327 VDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
            D W+FGI ++E M +G  P+   SN   ++ I     L  P   PS++ +
Sbjct: 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQ 241

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 13/123 (10%)

Query: 297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-- 354
           E V + + +F GT  Y++PE   G  +    D W+ G+ + E+   R PF          
Sbjct: 154 ELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGP 213

Query: 355 ---LRNIVKKPLTFPTQSPS---SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
              L  IV  P       P      SE   +D I   L KDP  R        D+  HP+
Sbjct: 214 IELLSYIVNMPNPELKDEPGNGIKWSE-EFKDFIKQCLEKDPTRRPTPW----DMLEHPW 268

Query: 409 FKG 411
            K 
Sbjct: 269 IKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           A +C  VGT  Y+SPE+     + N  D W+ G  +YE+   + PF   +    +  I +
Sbjct: 159 AYTC--VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ 216

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
               F   SP+   +  +  LIS L    P +R
Sbjct: 217 G--YFAPISPNFSRDLRS--LISQLFKVSPRDR 245

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 40.5 bits (94), Expect = 0.001
 Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 41/140 (29%)

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAP 349
           +V T  Y +PEV  G  +   VD W+ G  + EM+  +  F                  P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Query: 350 SNE------TTLRNIVK-KP----LTFPTQSPSSM----SEYH------ARDLISGLLNK 388
             E       T+RN V+ +P    LTFP   P S+    SE++      ARDL+S +L  
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297

Query: 389 DPCNRLGSKRGAADVKTHPF 408
           DP  R+       +   HP+
Sbjct: 298 DPAKRI----SVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 27/95 (28%), Positives = 45/95 (47%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  + K+ +HP +    A F A N   +V  F + G    L         S  +  +   
Sbjct: 49  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQ 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
            VL AL+Y+H +G ++R +K  ++L+  DG + LS
Sbjct: 109 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 143

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 68/303 (22%), Positives = 103/303 (33%), Gaps = 75/303 (24%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM--EKKIL 143
           R +G G  G VY        +     EP    A+K VN    E      R E   E  ++
Sbjct: 12  RELGQGSFGMVYEGIAKGVVKD----EPETRVAIKTVN----EAASMRERIEFLNEASVM 63

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFS-------LTSARF 195
           K  +   +  L         + ++ME  + GDL S LR  +P    +       L     
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
            A E+   + YL+    ++RDL   N +V  D  + + DF +                  
Sbjct: 124 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM------------------ 165

Query: 256 AASPRSQTYTRQ-YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                    TR  Y T   R        K  + L P R                   ++S
Sbjct: 166 ---------TRDIYETDYYR--------KGGKGLLPVR-------------------WMS 189

Query: 315 PEVASGGSHGNAVDWWAFGIFIYEM-IYGRTPFAAPSNETTLRNIVKKP-LTFPTQSPSS 372
           PE    G      D W+FG+ ++E+      P+   SNE  LR +++   L  P   P  
Sbjct: 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDM 249

Query: 373 MSE 375
           + E
Sbjct: 250 LFE 252

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +FVGT  +++PEV    ++ +  D W+ GI   E+  G  P +       L  I K    
Sbjct: 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-- 217

Query: 365 FPTQSPSSMSEY--HARDLISGLLNKDPCNRLGSK 397
                P+   E+    ++ I   LNKDP  R  +K
Sbjct: 218 ----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAK 248

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 11/151 (7%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +++   IG G  G VY     N  +  +       YA+K    +  +       A  E  
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKN-GKDGK------EYAIKKFKGDKEQYTGISQSACREIA 54

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVM--EFCSGGDLHSLRHKQPHKRFSLTSARFYAA- 198
           +L+ L H  + +L   F       + +  ++        ++  +  KR S+  +   +  
Sbjct: 55  LLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL 114

Query: 199 -EVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
            ++L  + YLH   +++RDLKP N+LV  +G
Sbjct: 115 WQILNGVHYLHSNWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)

Query: 118 AMKVVNKEVLEKKKKVHRAEMEK-----KILKML-DHPFLPTLYAEFEASNFSCIVMEFC 171
            MKV  K +   K   H +E E      KI+  L +H  +  L           ++ E+C
Sbjct: 65  VMKVAVKML---KPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYC 121

Query: 172 SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM 231
             GDL +   ++     +L     ++ +V   + +L     I+RDL   NVL+ + G I+
Sbjct: 122 CYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL-THGKIV 180

Query: 232 -LSDFDLS 238
            + DF L+
Sbjct: 181 KICDFGLA 188

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 16/88 (18%)

Query: 166 IVMEFCSGGDLHS-LRHKQP-------------HKRFSLTSARFYAAEVLVALEYLHMLG 211
           +V+E+ + G+L   LR ++P              +  +      +A +V   +E+L    
Sbjct: 93  VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK 152

Query: 212 IIYRDLKPENVLVRSDGHIM-LSDFDLS 238
            I+RDL   NVLV ++ H+M ++DF L+
Sbjct: 153 CIHRDLAARNVLV-TEDHVMKIADFGLA 179

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 30/171 (17%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI- 142
           L + +G G+ G+V    LN    QD          +KV  K +  K     R+EME  + 
Sbjct: 3   LGKTLGEGEFGSVMEGQLN----QDD-------SILKVAVKTM--KIAICTRSEMEDFLS 49

Query: 143 ----LKMLDHPFLPTLY------AEFEASNFSCIVMEFCSGGDLHSLR-----HKQPHKR 187
               +K  DHP +  L        E E      +++ F   GDLHS          P   
Sbjct: 50  EAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYL 109

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +    +F   ++   +EYL     I+RDL   N ++  + ++ ++DF LS
Sbjct: 110 PTQMLVKF-MTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|236400 PRK09188, PRK09188, serine/threonine protein kinase; Provisional

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 203 ALEYLHMLGIIYRDL-KPENVLVRSDGHIMLSDFDLSLC 240
           AL  LH  GI + DL KP+N L+  DG   + DF L+  
Sbjct: 123 ALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161

Length = 365

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           +PE A+ G      D W+FGI + E++ YGR P+   +N   L  +
Sbjct: 172 APEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV 217

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           ++ +PE  + GS     D W+FGI + E++ YGR P+   SN   +R +
Sbjct: 168 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 216

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 19/46 (41%), Positives = 29/46 (63%)

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           L   R    ++L A+EY+H   +I+RD+K EN+ +  DG I+L DF
Sbjct: 266 LKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDF 311

Length = 501

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	451
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.95
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.94
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.94
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.91
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
PRK12274	218	serine/threonine protein kinase; Provisional	99.87
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.87
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.85
PRK10345	210	hypothetical protein; Provisional	99.85
smart00090	237	RIO RIO-like kinase.	99.82
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.82
PRK14879	211	serine/threonine protein kinase; Provisional	99.81
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.8
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.8
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.79
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.78
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.78
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.73
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.72
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.69
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.66
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.55
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.52
KOG1243	690	consensus Protein kinase [General function predict	99.5
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.48
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.44
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.42
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.38
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.36
KOG3087	229	consensus Serine/threonine protein kinase [General	99.35
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.31
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.25
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.17
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.16
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.14
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.91
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.9
COG4248	637	Uncharacterized protein with protein kinase and he	98.87
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.85
PRK09902	216	hypothetical protein; Provisional	98.8
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.69
PF01636	239	APH: Phosphotransferase enzyme family This family	98.64
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.57
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.56
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.51
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.43
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.4
PLN02876	822	acyl-CoA dehydrogenase	98.28
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.27
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.21
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.17
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.14
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.07
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.05
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.04
PRK10593	297	hypothetical protein; Provisional	98.0
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.95
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.87
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.86
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.82
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.82
PRK05231	319	homoserine kinase; Provisional	97.76
PLN02756	418	S-methyl-5-thioribose kinase	97.69
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.62
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.59
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.43
PRK12396	409	5-methylribose kinase; Reviewed	97.42
KOG2270	520	consensus Serine/threonine protein kinase involved	97.31
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.29
PLN02236	344	choline kinase	97.15
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.15
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.13
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.12
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.87
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.82
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.5
PTZ00384	383	choline kinase; Provisional	96.48
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	96.48
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.46
COG2334	331	Putative homoserine kinase type II (protein kinase	96.43
KOG1236	565	consensus Predicted unusual protein kinase [Genera	96.34
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.16
PRK06148	1013	hypothetical protein; Provisional	95.88
PTZ00296	442	choline kinase; Provisional	95.87
PRK11768	325	serine/threonine protein kinase; Provisional	95.54

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.1e-64  Score=471.13  Aligned_cols=364  Identities=57%  Similarity=0.944  Sum_probs=298.2

Q ss_pred             CCCCCCCCCchhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH
Q 013016           51 LSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK  130 (451)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~  130 (451)
                      ....|+...+..+..+..........+.++.|+++++||.|.-|+||+|.++++..         ++|+||+.+......
T Consensus        48 ~~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~---------~fAmKVmdK~~l~~r  118 (459)
T KOG0610|consen   48 SGNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNC---------LFAMKVMDKESLASR  118 (459)
T ss_pred             ccCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCc---------eEEEEEecHHHHhhh
Confidence            34556666666554444444344556677899999999999999999999988764         699999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 013016          131 KKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML  210 (451)
Q Consensus       131 ~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~  210 (451)
                      +...+.+.|.+||..++||.++.||+.|+.+++.|+|||||+||+|..++++++++.|++..++.++.+++.||+|||-.
T Consensus       119 kKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml  198 (459)
T KOG0610|consen  119 KKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML  198 (459)
T ss_pred             hHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhcc-ccCCcc----c
Q 013016          211 GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNR-FFGSKK----I  285 (451)
Q Consensus       211 givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~  285 (451)
                      |||+|||||+||||.++|.+.|+||.++......+...............+... .    ...-+..+ ....++    .
T Consensus       199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~-~----~~s~f~~r~~~~~~~~~k~~  273 (459)
T KOG0610|consen  199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRS-R----QPSCFSPRCLSSSKKRKKKD  273 (459)
T ss_pred             ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccc-c----cccccccchhcccccccccc
Confidence            999999999999999999999999999976633333322211111111111111 0    01111111 111110    0


Q ss_pred             ccc-CCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC
Q 013016          286 QTL-TPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT  364 (451)
Q Consensus       286 ~~~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  364 (451)
                      ... ........++...++.+++||..|.|||++.|...+.++|.|+||++|||||.|..||.+.++.+.+.+|+...+.
T Consensus       274 ~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~  353 (459)
T KOG0610|consen  274 ESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK  353 (459)
T ss_pred             ccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence            000 2223345677888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       365 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      +|...   ..+..+++||+++|.+||.+|...+++|.||.+||||++++|++++...||.||.+...
T Consensus       354 Fp~~~---~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  354 FPEEP---EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVDG  417 (459)
T ss_pred             CCCCC---cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcccc
Confidence            98765   23338999999999999999999999999999999999999999999999999988754

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-59  Score=455.17  Aligned_cols=289  Identities=39%  Similarity=0.659  Sum_probs=260.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|.+++.||+|+|++|++|+.+.+.++         |||||+.++.....+.+..+.+|..+|.+| .||.|++|+..
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~ke---------YAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T  142 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKE---------YAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT  142 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCce---------eeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE
Confidence            37899999999999999999999988775         999999999999999999999999999999 89999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      |.+...+|+|+||+++|+|.++|+..  +.|++..++.++.||+.||+|||++|||||||||+|||++.||++||+|||.
T Consensus       143 FQD~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGs  220 (604)
T KOG0592|consen  143 FQDEESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGS  220 (604)
T ss_pred             eecccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccc
Confidence            99999999999999999999999987  6799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |+.+.........+...                                          ........+|+||..|++||+
T Consensus       221 AK~l~~~~~~~~~~~~~------------------------------------------~~a~s~~~SFVGTAeYVSPEl  258 (604)
T KOG0592|consen  221 AKILSPSQKSQENPVDP------------------------------------------NQASSRRSSFVGTAEYVSPEL  258 (604)
T ss_pred             cccCChhhccccCccCc------------------------------------------ccccCcccceeeeecccCHHH
Confidence            98766443322211000                                          001112357899999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +..+..+..+|||+||||||+|+.|++||.+.++...+++|+.....++...++     .+++||+++|..||.+|+|  
T Consensus       259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~-----~a~dLv~KLLv~dp~~Rlt--  331 (604)
T KOG0592|consen  259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPE-----DARDLIKKLLVRDPSDRLT--  331 (604)
T ss_pred             hcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCH-----HHHHHHHHHHccCcccccc--
Confidence            999999999999999999999999999999999999999999999988877654     8999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCCcccccccCCCCC-CCCC
Q 013016          398 RGAADVKTHPFFKGLNFALIRSLTPPEI-PGMR  429 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~~~~~~~~~-p~~~  429 (451)
                        +++|.+||||.+++|..++.+.||.| |..+
T Consensus       332 --~~qIk~HpFF~~Vdw~nlw~~~PP~l~py~p  362 (604)
T KOG0592|consen  332 --SQQIKAHPFFEGVDWENLWQQTPPKLQPYKP  362 (604)
T ss_pred             --HHHHhhCcccccCChhhhhhcCCCcccCCCC
Confidence              99999999999999999999999998 5544

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1e-59  Score=438.95  Aligned_cols=283  Identities=39%  Similarity=0.724  Sum_probs=254.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||+||.++.+++++         .||+|++++..............|..||..++||.||.++..|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~k---------iYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF   94 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGK---------IYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF   94 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCc---------eeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec
Confidence            3789999999999999999999887665         6999999999988888888899999999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ++.+++|||+||+.||.|..+|++.  +.|++..++.++.+|+.||.|||++|||||||||+|||++.+|.++|+|||+|
T Consensus        95 Qt~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~  172 (357)
T KOG0598|consen   95 QTEEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLC  172 (357)
T ss_pred             ccCCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccc
Confidence            9999999999999999999988875  66999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +...                                                       .....+.++|||+.|||||++
T Consensus       173 k~~~-------------------------------------------------------~~~~~t~tfcGT~eYmAPEil  197 (357)
T KOG0598|consen  173 KEDL-------------------------------------------------------KDGDATRTFCGTPEYMAPEIL  197 (357)
T ss_pred             hhcc-------------------------------------------------------cCCCccccccCCccccChHHH
Confidence            5321                                                       122334468999999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+.+|+.++|.||||+++|||++|.+||.+.+...+.++|..++...+...    .+.++++||+++|..||++|.....
T Consensus       198 ~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~----ls~~ardll~~LL~rdp~~RLg~~~  273 (357)
T KOG0598|consen  198 LGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGY----LSEEARDLLKKLLKRDPRQRLGGPG  273 (357)
T ss_pred             hcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCcc----CCHHHHHHHHHHhccCHHHhcCCCC
Confidence            999999999999999999999999999999999999999999984444332    2238999999999999999986555


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      ++.+|.+||||..++|..+  +++.||+.|...+.
T Consensus       274 d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~  308 (357)
T KOG0598|consen  274 DAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGL  308 (357)
T ss_pred             ChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCc
Confidence            6999999999999999854  88999999998875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.2e-57  Score=441.53  Aligned_cols=327  Identities=36%  Similarity=0.647  Sum_probs=266.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|+++..||+|+||.||+|+.+.++.         +||+|++++.......++..+..|..+|....+++||++|
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~---------iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLy  207 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGE---------IYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLY  207 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCc---------EEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEE
Confidence            4567899999999999999999999888776         6999999999998899999999999999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      -.|++..++||||||++||++..+|.+.  +.|++..++.++.+++.|++-||+.|+|||||||+|+||+..|++||+||
T Consensus       208 YsFQD~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDF  285 (550)
T KOG0605|consen  208 YSFQDKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDF  285 (550)
T ss_pred             EEecCCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccc
Confidence            9999999999999999999999998875  66999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccC----CCcc--------cccccccccc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLT----PNRL--------FVAEPVAARS  303 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~  303 (451)
                      |+|.-...........                    .....+.........+..    +.+.        ..........
T Consensus       286 GLs~gl~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a  345 (550)
T KOG0605|consen  286 GLSTGLDKKHRIESYR--------------------LDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLA  345 (550)
T ss_pred             cccchhhhhhhhhhhc--------------------chhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhh
Confidence            9985433221111000                    000000000000000000    0000        0011223334


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~l  381 (451)
                      .+++|||-|||||++.+..|+..+|.|||||||||||.|.+||.+....+...+|++..  +.+|....  .. .++++|
T Consensus       346 ~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~--~s-~eA~DL  422 (550)
T KOG0605|consen  346 YSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVD--LS-DEAKDL  422 (550)
T ss_pred             hcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCc--cc-HHHHHH
Confidence            45799999999999999999999999999999999999999999999999999999876  44444333  22 499999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCCCCCCCC
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      |.+||. ||++|.. ..+++||.+||||++++|..++...+|++|.+.++-.-++++
T Consensus       423 I~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v~~~~DT~yFd  477 (550)
T KOG0605|consen  423 ITRLLC-DPENRLG-SKGAEEIKKHPFFKGVDWDHLREMPAPFVPQVNSELDTQYFD  477 (550)
T ss_pred             HHHHhc-CHHHhcC-cccHHHHhcCCccccCCcchhhcCCCCCCCCCCCcccccccc
Confidence            999999 9999998 677999999999999999999999999999999875555544

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.3e-59  Score=437.75  Aligned_cols=263  Identities=30%  Similarity=0.470  Sum_probs=231.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH----HHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----KKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      +.|.+.+.||+|+||.|-+|..+.+++         .||||+++++....    ......+.+|+++|++|+|||||+++
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk---------~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~  242 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGK---------QVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIK  242 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCc---------EEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEe
Confidence            569999999999999999999988876         49999999887654    22445567899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEE
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIML  232 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl  232 (451)
                      ++|+..+..||||||+.||+|.+.+-.+  +.+.+...+.+++||+.||.|||++||+||||||+|||+..+   ..+||
T Consensus       243 d~f~~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKI  320 (475)
T KOG0615|consen  243 DFFEVPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKI  320 (475)
T ss_pred             eeeecCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEe
Confidence            9999999999999999999999988765  568899999999999999999999999999999999999866   68999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||+|+..+                                                        ......++|||+.|
T Consensus       321 tDFGlAK~~g--------------------------------------------------------~~sfm~TlCGTpsY  344 (475)
T KOG0615|consen  321 TDFGLAKVSG--------------------------------------------------------EGSFMKTLCGTPSY  344 (475)
T ss_pred             cccchhhccc--------------------------------------------------------cceehhhhcCCccc
Confidence            9999996432                                                        12334468999999


Q ss_pred             cCcccccCCCC---CcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          313 VSPEVASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       313 ~aPE~~~~~~~---~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      .|||++.+..+   ..++||||+|||||-+|+|.+||.+..... ...+|.++...+-...|..+.+ ++++||++||..
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Ise-ea~dlI~~mL~V  423 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISE-EALDLINWMLVV  423 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhH-HHHHHHHHhhEe
Confidence            99999988653   458899999999999999999999877776 7888999988887777776666 899999999999


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      ||++||+    ++|+|+||||+-.+.
T Consensus       424 dP~~R~s----~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  424 DPENRPS----ADEALNHPWFKDAPC  445 (475)
T ss_pred             CcccCcC----HHHHhcChhhhcccc
Confidence            9999999    999999999997663

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-57  Score=411.18  Aligned_cols=291  Identities=39%  Similarity=0.695  Sum_probs=263.1

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..+++|++++.||.|+||+|.+++.+.++.         .||+|++.++....-++++...+|..+|+.+.||.++++++
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~---------yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~  111 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGN---------YYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYG  111 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCc---------eeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEE
Confidence            456899999999999999999999988765         59999999999999999999999999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      .|.+.+++||||||++||.|..++++.  ++|++..++.++.||+.||+|||+++|++|||||+|||++.+|.+||+|||
T Consensus       112 t~~d~~~lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFG  189 (355)
T KOG0616|consen  112 TFKDNSNLYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFG  189 (355)
T ss_pred             eeccCCeEEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEecc
Confidence            999999999999999999999999886  679999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|+..                                                          ..++.++||||.|+|||
T Consensus       190 FAK~v----------------------------------------------------------~~rT~TlCGTPeYLAPE  211 (355)
T KOG0616|consen  190 FAKRV----------------------------------------------------------SGRTWTLCGTPEYLAPE  211 (355)
T ss_pred             ceEEe----------------------------------------------------------cCcEEEecCCccccChH
Confidence            98632                                                          23455789999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc-CC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR-LG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R-pt  395 (451)
                      ++...+|+.++|.||||+++|||+.|.+||...+...++.+|+.+.+.+|....+     ++++||+++|++|-.+| -+
T Consensus       212 ii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~-----~~kdLl~~LL~vD~t~R~gn  286 (355)
T KOG0616|consen  212 IIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSS-----DAKDLLKKLLQVDLTKRFGN  286 (355)
T ss_pred             HhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCH-----HHHHHHHHHHhhhhHhhhcC
Confidence            9999999999999999999999999999999999999999999999999987665     89999999999999999 44


Q ss_pred             CCCChHHHHcCCCcCCCCccc--ccccCCCCCC-CCCCCCCCCCCCCcc
Q 013016          396 SKRGAADVKTHPFFKGLNFAL--IRSLTPPEIP-GMRRQKTMPFPDQKI  441 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~--~~~~~~~~~p-~~~~~~~~~~~~~~~  441 (451)
                      .+.+.++|..||||++++|..  .+...+|..| ....+-....++.+-
T Consensus       287 lknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~  335 (355)
T KOG0616|consen  287 LKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYE  335 (355)
T ss_pred             cCCCccccccCcccccccHHHHhhccccCCCCCccccCCcccccccccc
Confidence            566899999999999999974  4888888887 444444444444443

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-57  Score=449.67  Aligned_cols=303  Identities=37%  Similarity=0.691  Sum_probs=272.7

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~  153 (451)
                      ..+.+++|.++++||+|+||+|+++..+.+.+         +||||+++|.....++.++....|..|+.... ||.++.
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e---------~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~  433 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNE---------YYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVN  433 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCc---------EEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEee
Confidence            35567899999999999999999999998876         69999999998888888888889999988775 999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ++.+|++.+++|+||||+.||++..+++.   ..|++..++.++..|+.||.|||++||||||||.+|||+|.+|.+||+
T Consensus       434 L~~~fQT~~~l~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiA  510 (694)
T KOG0694|consen  434 LFSCFQTKEHLFFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIA  510 (694)
T ss_pred             cccccccCCeEEEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEec
Confidence            99999999999999999999995544433   569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+...                                                       ....++.++|||+.||
T Consensus       511 DFGlcKe~m-------------------------------------------------------~~g~~TsTfCGTpey~  535 (694)
T KOG0694|consen  511 DFGLCKEGM-------------------------------------------------------GQGDRTSTFCGTPEFL  535 (694)
T ss_pred             ccccccccC-------------------------------------------------------CCCCccccccCChhhc
Confidence            999996311                                                       1234667899999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |||++.+..|+.++|.|||||+|||||.|+.||.+.++++.+..|+...+.+|.....     ++.++++++|.+||++|
T Consensus       536 aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~-----ea~~il~~ll~k~p~kR  610 (694)
T KOG0694|consen  536 APEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSK-----EAIAIMRRLLRKNPEKR  610 (694)
T ss_pred             ChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccH-----HHHHHHHHHhccCcccc
Confidence            9999999999999999999999999999999999999999999999999998887654     89999999999999999


Q ss_pred             CCC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCccccCC
Q 013016          394 LGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQSTAFD  449 (451)
Q Consensus       394 pt~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  449 (451)
                      ..+ ..++++|..||||++|+|..+  +...||++|..+++....++++.-.+..-+++
T Consensus       611 LG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~p~Lt  669 (694)
T KOG0694|consen  611 LGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEKPALT  669 (694)
T ss_pred             cCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcccchhhhcCCCccC
Confidence            996 456899999999999999854  99999999999999988888887776655554

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-56  Score=439.95  Aligned_cols=257  Identities=32%  Similarity=0.558  Sum_probs=237.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|...+.||+|||++||.+++..+++         .||+|++.+.........+++.+|++|.+.|+|||||+++++|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge---------~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE   88 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGE---------VVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE   88 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCc---------EEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee
Confidence            459999999999999999999977765         49999999999888889999999999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.++.|||.|+|..++|..++++.  +.+++.+++.+++||+.||.|||+++|+|||||..|+|++++.+|||+|||+|.
T Consensus        89 Ds~nVYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt  166 (592)
T KOG0575|consen   89 DSNNVYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLAT  166 (592)
T ss_pred             cCCceEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceee
Confidence            999999999999999999998854  679999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ...                                                       ....+..++||||.|.|||++.
T Consensus       167 ~le-------------------------------------------------------~~~Erk~TlCGTPNYIAPEVl~  191 (592)
T KOG0575|consen  167 QLE-------------------------------------------------------YDGERKKTLCGTPNYIAPEVLN  191 (592)
T ss_pred             eec-------------------------------------------------------CcccccceecCCCcccChhHhc
Confidence            332                                                       1234455789999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      ...++..+||||+|||||-||.|++||....-.+.+.+|.......|.....     ++++||..||+.||.+|||    
T Consensus       192 k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~-----~A~dLI~~lL~~~P~~Rps----  262 (592)
T KOG0575|consen  192 KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSA-----EAKDLIRKLLRPNPSERPS----  262 (592)
T ss_pred             cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCH-----HHHHHHHHHhcCCcccCCC----
Confidence            9999999999999999999999999999999999999999999888874433     8999999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      +++||.|+||+.
T Consensus       263 l~~vL~h~Ff~~  274 (592)
T KOG0575|consen  263 LDEVLDHPFFKS  274 (592)
T ss_pred             HHHHhcCHhhhC
Confidence            999999999944

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-56  Score=414.04  Aligned_cols=262  Identities=31%  Similarity=0.489  Sum_probs=228.2

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .+++..+.+..+.||+|..|+||+|.++.+.+         ++|+|++...  .+....+.+.+|+++++..+||+||.+
T Consensus        74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~---------i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~  142 (364)
T KOG0581|consen   74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGK---------IYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGF  142 (364)
T ss_pred             cccCHHHhhhhhhcccCCCcEEEEEEEcCCCe---------EEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeE
Confidence            34555788889999999999999999998776         6999999543  344556778889999999999999999


Q ss_pred             eEEEEeCC-eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEE
Q 013016          155 YAEFEASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       155 ~~~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ||+|..++ .++|+||||.||||.+++...  +++++.....|+.++++||.|||+ .+||||||||+|||++..|+|||
T Consensus       143 ygaF~~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKi  220 (364)
T KOG0581|consen  143 YGAFYSNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKI  220 (364)
T ss_pred             eEEEEeCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEe
Confidence            99999999 499999999999999998876  679999999999999999999995 99999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      ||||.+..+.                                                         .+...+++||..|
T Consensus       221 cDFGVS~~lv---------------------------------------------------------nS~a~tfvGT~~Y  243 (364)
T KOG0581|consen  221 CDFGVSGILV---------------------------------------------------------NSIANTFVGTSAY  243 (364)
T ss_pred             ccccccHHhh---------------------------------------------------------hhhcccccccccc
Confidence            9999984321                                                         1234568999999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhcCCCC-CCCCCCCCcChHHHHHHHHHhc
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP-----SNETTLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      ||||.+.+..|+.++||||||++|+||.+|+.||...     ...+.+..|+.+..+ +|..    .++.++++||..||
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~----~fS~ef~~FV~~CL  319 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG----EFSPEFRSFVSCCL  319 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc----cCCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999875     556778888876432 3332    45559999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .+||.+||+    +.|++.|||+++...
T Consensus       320 ~Kdp~~R~s----~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  320 RKDPSERPS----AKQLLQHPFIKKFED  343 (364)
T ss_pred             cCCcccCCC----HHHHhcCHHHhhccc
Confidence            999999999    999999999998444

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-53  Score=398.34  Aligned_cols=262  Identities=30%  Similarity=0.518  Sum_probs=227.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||.|+||+||+|+++.++..         ||||.+.+... ..+..+.+..|+.+|+.++|||||.++++
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~---------VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~   77 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTE---------VAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDC   77 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCce---------EEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEE
Confidence            347899999999999999999999988764         99999988754 45667778889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC------CCEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD------GHIM  231 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~------~~~k  231 (451)
                      +..++++|||||||.||+|.+|++..  +.+++..++.++.||+.||++||+++||||||||+|||++..      -.+|
T Consensus        78 ~~~~~~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LK  155 (429)
T KOG0595|consen   78 IEDDDFIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLK  155 (429)
T ss_pred             EecCCeEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEE
Confidence            99999999999999999999999986  469999999999999999999999999999999999999865      3589


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||+|+.+..                                                        .....+.||++.
T Consensus       156 IADFGfAR~L~~--------------------------------------------------------~~~a~tlcGSpl  179 (429)
T KOG0595|consen  156 IADFGFARFLQP--------------------------------------------------------GSMAETLCGSPL  179 (429)
T ss_pred             ecccchhhhCCc--------------------------------------------------------hhHHHHhhCCcc
Confidence            999999965431                                                        122235699999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |||||++..+.|+.|+|+||+|+|||+|++|+.||...+..+.+..+..+.-..+...  ...+..+.+|+...|..+|.
T Consensus       180 YMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~--~~~s~~~~~Ll~~ll~~~~~  257 (429)
T KOG0595|consen  180 YMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP--AELSNPLRELLISLLQRNPK  257 (429)
T ss_pred             ccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh--hhccCchhhhhhHHHhcCcc
Confidence            9999999999999999999999999999999999999999999888777654333221  11222567999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCCC
Q 013016          392 NRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      .|.+    ..+-+.|+++....
T Consensus       258 ~~~~----~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  258 DRIS----FEDFFDHPFLAANP  275 (429)
T ss_pred             ccCc----hHHhhhhhhcccCc
Confidence            9999    89999999998854

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.8e-53  Score=382.54  Aligned_cols=260  Identities=27%  Similarity=0.421  Sum_probs=212.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|+.+.++|+|+||+||+|+++++++         .||||.+.... .+....+-..+|+++|++++|+|+|.++++|.
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~Tgq---------IVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr   71 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQ---------IVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFR   71 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCccc---------EEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            568889999999999999999988776         69999996432 23344455678999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ....++||+|||...-| +-+...++ .++.+.++.++.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+
T Consensus        72 rkrklhLVFE~~dhTvL-~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR  149 (396)
T KOG0593|consen   72 RKRKLHLVFEYCDHTVL-HELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFAR  149 (396)
T ss_pred             hcceeEEEeeecchHHH-HHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhH
Confidence            99999999999966444 44555544 48999999999999999999999999999999999999999999999999995


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .+..+                                                       ...-..++.|++|+|||++.
T Consensus       150 ~L~~p-------------------------------------------------------gd~YTDYVATRWYRaPELLv  174 (396)
T KOG0593|consen  150 TLSAP-------------------------------------------------------GDNYTDYVATRWYRAPELLV  174 (396)
T ss_pred             hhcCC-------------------------------------------------------cchhhhhhhhhhccChhhhc
Confidence            43211                                                       01111357899999999999


Q ss_pred             C-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-------------------CCCCCC--------CC
Q 013016          320 G-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-------------------TFPTQS--------PS  371 (451)
Q Consensus       320 ~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-------------------~~~~~~--------~~  371 (451)
                      | ..|+.++||||+||++.||++|.+.|.+.++.+.+..|.....                   .+|...        .+
T Consensus       175 GDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p  254 (396)
T KOG0593|consen  175 GDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP  254 (396)
T ss_pred             ccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcc
Confidence            9 6799999999999999999999999999988877666654111                   111111        11


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .+.. -+.+|++.||..||.+|++    .+++|.|+||.+
T Consensus       255 ~~s~-~~ld~~k~cL~~dP~~R~s----c~qll~H~yFd~  289 (396)
T KOG0593|consen  255 KISN-VLLDLLKKCLKMDPDDRLS----CEQLLHHPYFDG  289 (396)
T ss_pred             cchH-HHHHHHHHHhcCCcccccc----HHHHhcChHHHH
Confidence            1222 5789999999999999999    999999999966

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-52  Score=400.22  Aligned_cols=260  Identities=29%  Similarity=0.412  Sum_probs=220.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~  157 (451)
                      .++|.++++||.|+||.||+|..+.+++         +||||.+++.... .+... -.+|+..|++|+ |||||++.++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~---------~VAIK~MK~Kf~s-~ee~~-nLREvksL~kln~hpniikL~Ev   77 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGE---------LVAIKKMKKKFYS-WEECM-NLREVKSLRKLNPHPNIIKLKEV   77 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCc---------eeeHHHHHhhhcc-HHHHH-HHHHHHHHHhcCCCCcchhhHHH
Confidence            3789999999999999999999887765         5999999876543 22222 346999999998 9999999999


Q ss_pred             EEeCC-eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          158 FEASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       158 ~~~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      +.+++ ++|+||||| ..+|+++++.+ +..|++..++.|+.||+.||+|+|.+|++||||||+|||+..+..+||+|||
T Consensus        78 i~d~~~~L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFG  155 (538)
T KOG0661|consen   78 IRDNDRILYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFG  155 (538)
T ss_pred             hhccCceEeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccc
Confidence            99888 999999999 88999999887 7889999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|+.....+.-.                                                        .++.|++|+|||
T Consensus       156 LARev~SkpPYT--------------------------------------------------------eYVSTRWYRAPE  179 (538)
T KOG0661|consen  156 LAREVRSKPPYT--------------------------------------------------------EYVSTRWYRAPE  179 (538)
T ss_pred             cccccccCCCcc--------------------------------------------------------hhhhcccccchH
Confidence            997554332211                                                        247899999999


Q ss_pred             cccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCC-----------------------
Q 013016          317 VASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS-----------------------  372 (451)
Q Consensus       317 ~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------  372 (451)
                      +++. ..|+.++||||+|||++|+++-++.|.+.++.+.+.+|......+....++.                       
T Consensus       180 vLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L  259 (538)
T KOG0661|consen  180 VLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDL  259 (538)
T ss_pred             HhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHh
Confidence            9876 5589999999999999999999999999998888887766333222221111                       


Q ss_pred             --cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          373 --MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       373 --~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                        ..+.++.++|.+||.|||.+|||    |.|+|+||||+.
T Consensus       260 ~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~~pffq~  296 (538)
T KOG0661|consen  260 LPNASSEAASLIERLLAWDPDKRPT----ASQALQHPFFQV  296 (538)
T ss_pred             CcccCHHHHHHHHHHhcCCCccCcc----HHHHhcCccccc
Confidence              12338899999999999999999    999999999998

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-51  Score=404.31  Aligned_cols=261  Identities=33%  Similarity=0.561  Sum_probs=229.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH--HHHHHHHHHHHHHHHCC-CCCccce
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK--KKVHRAEMEKKILKMLD-HPFLPTL  154 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~-h~nIv~l  154 (451)
                      ..+.|.+.+.||+|+||+|++|.+..++.         .||+|++++......  .....+.+|+.+++++. ||||+++
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~---------~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l   85 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGE---------KVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRL   85 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCC---------eEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEE
Confidence            34789999999999999999999887765         399998887532211  23455667999999998 9999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEEe
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLS  233 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl~  233 (451)
                      ++++....++|+|||||.||+|.+++..  .+++.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+
T Consensus        86 ~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~  163 (370)
T KOG0583|consen   86 LEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLS  163 (370)
T ss_pred             EEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEe
Confidence            9999999999999999999999999988  3679999999999999999999999999999999999999999 999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++....                                                       .......+++||+.|+
T Consensus       164 DFG~s~~~~-------------------------------------------------------~~~~~l~t~cGsp~Y~  188 (370)
T KOG0583|consen  164 DFGLSAISP-------------------------------------------------------GEDGLLKTFCGSPAYA  188 (370)
T ss_pred             ccccccccC-------------------------------------------------------CCCCcccCCCCCcccC
Confidence            999985321                                                       0112223569999999


Q ss_pred             CcccccCCC-C-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          314 SPEVASGGS-H-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       314 aPE~~~~~~-~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |||++.+.. | +.++||||+|++||.|++|+.||...+....+..|..+...+|....    +.++++|+.+||..||.
T Consensus       189 aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~----S~~~~~Li~~mL~~~P~  264 (370)
T KOG0583|consen  189 APEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL----SPEARSLIEKMLVPDPS  264 (370)
T ss_pred             CHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC----CHHHHHHHHHHcCCCcc
Confidence            999999977 7 58999999999999999999999998888899999999888887653    33899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCC
Q 013016          392 NRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      +|++    +.+++.||||+..
T Consensus       265 ~R~t----~~~i~~h~w~~~~  281 (370)
T KOG0583|consen  265 TRIT----LLEILEHPWFQKE  281 (370)
T ss_pred             cCCC----HHHHhhChhhccC
Confidence            9999    9999999999983

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.9e-52  Score=408.97  Aligned_cols=260  Identities=26%  Similarity=0.500  Sum_probs=233.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .+-|++.+-||.|+.|.|-+|++..+++         +.|||++.+...........+++|+.||+.+.||||+++|+++
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGq---------laaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw   81 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQ---------LAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW   81 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccc---------eeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee
Confidence            3669999999999999999999887766         6999999988555556667788999999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ++..++|+|.||++||.|.+++-..  +++++.++.++++||+.|+.|+|..+||||||||+|+|++..+++||+|||+|
T Consensus        82 e~~~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMA  159 (786)
T KOG0588|consen   82 ENKQHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMA  159 (786)
T ss_pred             ccCceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeecccee
Confidence            9999999999999999999998775  77999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      -....                                                        ...-.+.||.+.|.|||++
T Consensus       160 sLe~~--------------------------------------------------------gklLeTSCGSPHYA~PEIV  183 (786)
T KOG0588|consen  160 SLEVP--------------------------------------------------------GKLLETSCGSPHYAAPEIV  183 (786)
T ss_pred             ecccC--------------------------------------------------------CccccccCCCcccCCchhh
Confidence            42211                                                        0111134999999999999


Q ss_pred             cCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .|.+| +.++||||+|||||.||||+.||.+.+....+.++.+|.+..|.....     ++++||++||.+||++|.|  
T Consensus       184 ~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~-----eaQdLLr~ml~VDp~~RiT--  256 (786)
T KOG0588|consen  184 SGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISS-----EAQDLLRRMLDVDPSTRIT--  256 (786)
T ss_pred             cCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCH-----HHHHHHHHHhccCcccccc--
Confidence            99998 889999999999999999999999999999999999999888865544     9999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCCc
Q 013016          398 RGAADVKTHPFFKGLNF  414 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~  414 (451)
                        .+||++|||+++-.-
T Consensus       257 --~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  257 --TEEILKHPFLSGYTS  271 (786)
T ss_pred             --HHHHhhCchhhcCCC
Confidence              999999999999433

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=9.5e-51  Score=398.52  Aligned_cols=281  Identities=38%  Similarity=0.692  Sum_probs=238.3

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ...+++|.+.+.||+|+||.||+|.++.+++         .||+|++.+...........+..|+.++++++||||++++
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   84 (329)
T PTZ00263         14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGE---------YYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMM   84 (329)
T ss_pred             CCCchheEEEEEEEecCCeEEEEEEECCCCC---------EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence            3445889999999999999999999987765         4999999877555555667788899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++..++..|+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        85 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Df  162 (329)
T PTZ00263         85 CSFQDENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDF  162 (329)
T ss_pred             EEEEcCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeec
Confidence            9999999999999999999999988765  46899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                          .....+||+.|+||
T Consensus       163 g~~~~~~~----------------------------------------------------------~~~~~~gt~~y~aP  184 (329)
T PTZ00263        163 GFAKKVPD----------------------------------------------------------RTFTLCGTPEYLAP  184 (329)
T ss_pred             cCceEcCC----------------------------------------------------------CcceecCChhhcCH
Confidence            99742210                                                          01124789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||......+....+..+...++..     .+..+++||.+||+.||.+|++
T Consensus       185 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~  259 (329)
T PTZ00263        185 EVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNW-----FDGRARDLVKGLLQTDHTKRLG  259 (329)
T ss_pred             HHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCC-----CCHHHHHHHHHHhhcCHHHcCC
Confidence            99999889999999999999999999999999888888888888776655543     3348999999999999999997


Q ss_pred             C-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          396 S-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       396 ~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      . ...+++|+.||||++.+|...  +...+|..|....
T Consensus       260 ~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~~  297 (329)
T PTZ00263        260 TLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKS  297 (329)
T ss_pred             CCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCC
Confidence            3 334799999999999988754  4445555454433

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=6.9e-51  Score=398.52  Aligned_cols=278  Identities=37%  Similarity=0.679  Sum_probs=231.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||+|.++.+++         .||||++.+...........+..|+.++++++||||+++++++...+.+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~   71 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGK---------YYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLC   71 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEE
Confidence            369999999999999887665         49999998776555555667778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus        72 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~--  147 (323)
T cd05571          72 FVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS--  147 (323)
T ss_pred             EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc--
Confidence            999999999999988764  5689999999999999999999999999999999999999999999999999742100  


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                                                                           .......++||+.|+|||++.+..++.
T Consensus       148 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05571         148 -----------------------------------------------------DGATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             -----------------------------------------------------CCCcccceecCccccChhhhcCCCCCc
Confidence                                                                 001112357999999999999989999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC-ChHHHH
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~-~~~ell  404 (451)
                      ++|||||||++|||++|+.||...........+..+...++..     .+.++.+||.+||+.||++||+... .+.+++
T Consensus       175 ~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll  249 (323)
T cd05571         175 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIM  249 (323)
T ss_pred             cccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHH
Confidence            9999999999999999999999888888888887776655543     2338999999999999999992100 199999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRRQKTM  434 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~  434 (451)
                      +||||++++|...  ....+|..|........
T Consensus       250 ~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (323)
T cd05571         250 EHRFFASINWQDVVQKKLEPPFKPQVTSETDT  281 (323)
T ss_pred             cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchh
Confidence            9999999999755  45566666666654333

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-51  Score=392.15  Aligned_cols=277  Identities=39%  Similarity=0.683  Sum_probs=235.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||+|++.............+.+|+.+++.++||||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   71 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEH---------YYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH   71 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCC---------EEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc
Confidence            469999999999999999999887655         49999998665444455667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+++|+||||+++++|.+++...  +.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~  149 (291)
T cd05612          72 DQRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAK  149 (291)
T ss_pred             cCCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcch
Confidence            999999999999999999998765  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                          .....+|++.|+|||++.
T Consensus       150 ~~~~----------------------------------------------------------~~~~~~gt~~y~aPE~~~  171 (291)
T cd05612         150 KLRD----------------------------------------------------------RTWTLCGTPEYLAPEVIQ  171 (291)
T ss_pred             hccC----------------------------------------------------------CcccccCChhhcCHHHHc
Confidence            2210                                                          011246899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~  398 (451)
                      +..++.++|||||||++|+|++|+.||......+....+..+...++...     +..+++||++||+.||.+|++. +.
T Consensus       172 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~li~~~l~~dp~~R~~~~~~  246 (291)
T cd05612         172 SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHL-----DLYAKDLIKKLLVVDRTRRLGNMKN  246 (291)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccC-----CHHHHHHHHHHcCCCHHHccCCccC
Confidence            98899999999999999999999999999888888888888776655433     3389999999999999999942 33


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      .++++++||||+.++|...  ....++..|....
T Consensus       247 ~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~  280 (291)
T cd05612         247 GADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSH  280 (291)
T ss_pred             CHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCC
Confidence            3999999999999999753  4555666666543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-50  Score=397.31  Aligned_cols=282  Identities=35%  Similarity=0.695  Sum_probs=239.1

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+.+++|.+.+.||.|+||.||+|.++....        ..||+|++.+...........+..|+.+++.++||||++++
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~   97 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDF--------PPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLY   97 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECCCC--------eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceE
Confidence            3455889999999999999999998765432        14999999876555555667788899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+++++|+||||++||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+||
T Consensus        98 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DF  175 (340)
T PTZ00426         98 GSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDF  175 (340)
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecC
Confidence            9999999999999999999999998765  45899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                          .....+||+.||||
T Consensus       176 G~a~~~~~----------------------------------------------------------~~~~~~gt~~y~aP  197 (340)
T PTZ00426        176 GFAKVVDT----------------------------------------------------------RTYTLCGTPEYIAP  197 (340)
T ss_pred             CCCeecCC----------------------------------------------------------CcceecCChhhcCH
Confidence            99742210                                                          01134799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|..||...........+..+...++...     +.++.++|++||+.||++|++
T Consensus       198 E~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----~~~~~~li~~~l~~dp~~R~~  272 (340)
T PTZ00426        198 EILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFL-----DNNCKHLMKKLLSHDLTKRYG  272 (340)
T ss_pred             HHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHHHcccCHHHcCC
Confidence            999998899999999999999999999999999888888888888776555432     338999999999999999962


Q ss_pred             C-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          396 S-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       396 ~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      . ...++++++||||++++|...  ....+|..|....
T Consensus       273 ~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~  310 (340)
T PTZ00426        273 NLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKN  310 (340)
T ss_pred             CCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence            1 122999999999999998754  5667777787654

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-50  Score=384.23  Aligned_cols=270  Identities=29%  Similarity=0.408  Sum_probs=231.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++...||.|..++||+|+......         +||||+++-+.....  .+.+.+|+..++.++||||++++..
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e---------~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~s   92 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNE---------VVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCS   92 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCC---------EEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEE
Confidence            33789999999999999999999887664         699999998865443  7888899999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      |..+..+|+||.||.+||+.++++......|++..+..|++++++||.|||++|-||||||+.||||+.+|.|||+|||.
T Consensus        93 Fvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgv  172 (516)
T KOG0582|consen   93 FVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGV  172 (516)
T ss_pred             EEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCcee
Confidence            99999999999999999999999988777799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.++...-                                                   .....+..+++||+.|||||+
T Consensus       173 sa~l~~~G---------------------------------------------------~R~~~rf~tfvgtp~wmAPEv  201 (516)
T KOG0582|consen  173 SASLFDSG---------------------------------------------------DRQVTRFNTFVGTPCWMAPEV  201 (516)
T ss_pred             eeeecccC---------------------------------------------------ceeeEeeccccCcccccChHH
Confidence            85543210                                                   000111146799999999999


Q ss_pred             ccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-----CCCCCcChHHHHHHHHHhcccCc
Q 013016          318 ASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-----QSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       318 ~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      +..  ..|+.|+||||||++..||.+|..||.......++..-+++.++.+.     .......+..++.+|..||.+||
T Consensus       202 l~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP  281 (516)
T KOG0582|consen  202 LMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDP  281 (516)
T ss_pred             hhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCc
Confidence            654  45899999999999999999999999998888888777777665332     11122233478999999999999


Q ss_pred             CCcCCCCCChHHHHcCCCcCCCC
Q 013016          391 CNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      .+|||    +.++|+|+||+...
T Consensus       282 ~kRpt----AskLlkh~FFk~~k  300 (516)
T KOG0582|consen  282 SKRPT----ASKLLKHAFFKKAK  300 (516)
T ss_pred             ccCCC----HHHHhccHHHhhcc
Confidence            99999    99999999999943

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.3e-52  Score=402.41  Aligned_cols=255  Identities=31%  Similarity=0.547  Sum_probs=228.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|+.+.+.+         +||+|.+.+... ..+..+.+.+|++|++.++|||||.++++|+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~---------~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfE   71 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQ---------VVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFE   71 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccccee---------EEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhc
Confidence            578889999999999999999887765         699999987753 3455678889999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ...++|+|.|||.| +|..++...  +.++++.+..++.|++.||.|||+++|.|||+||.|||+...|.+|+||||+|+
T Consensus        72 t~~~~~vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar  148 (808)
T KOG0597|consen   72 TSAHLWVVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLAR  148 (808)
T ss_pred             ccceEEEEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhh
Confidence            99999999999965 999999886  569999999999999999999999999999999999999999999999999996


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ...-.++.|||.|||||++.
T Consensus       149 ~m~~~-------------------------------------------------------t~vltsikGtPlYmAPElv~  173 (808)
T KOG0597|consen  149 AMSTN-------------------------------------------------------TSVLTSIKGTPLYMAPELVE  173 (808)
T ss_pred             hcccC-------------------------------------------------------ceeeeeccCcccccCHHHHc
Confidence            44321                                                       11222468999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +++|+..+|+||||||+|||++|++||...+.......|......+|.....     .+++|+..+|.+||..|.+    
T Consensus       174 e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~-----~f~nfl~gLL~kdP~~Rlt----  244 (808)
T KOG0597|consen  174 EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASS-----SFVNFLQGLLIKDPAQRLT----  244 (808)
T ss_pred             CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccH-----HHHHHHHHHhhcChhhccc----
Confidence            9999999999999999999999999999988888999999988777764433     8999999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      ..+++.|||+++
T Consensus       245 W~~Ll~HpF~k~  256 (808)
T KOG0597|consen  245 WTDLLGHPFWKG  256 (808)
T ss_pred             HHHHhcChHHhh
Confidence            999999999998

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=5.1e-51  Score=373.92  Aligned_cols=273  Identities=26%  Similarity=0.318  Sum_probs=225.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|+.+.+|++|+||.||+|+++.+.+         +||+|.++.+. .....--...+|+.+|.+++|||||.+-++
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~e---------IVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEV  143 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDE---------IVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEV  143 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcce---------eEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEE
Confidence            45789999999999999999999988765         69999998664 222222335679999999999999999998


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ....  +.+||||||| .-+|..++...+ .+|...+++.+..|++.||+|||.++|+|||||++|+|++..|.+||+||
T Consensus       144 VvG~~~d~iy~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDF  221 (419)
T KOG0663|consen  144 VVGSNMDKIYIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADF  221 (419)
T ss_pred             EeccccceeeeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEeccc
Confidence            7644  5799999999 568999888875 67999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|+....+.                                        ..+               ...+-|.+|+||
T Consensus       222 GLAR~ygsp~----------------------------------------k~~---------------T~lVVTLWYRaP  246 (419)
T KOG0663|consen  222 GLAREYGSPL----------------------------------------KPY---------------TPLVVTLWYRAP  246 (419)
T ss_pred             chhhhhcCCc----------------------------------------ccC---------------cceEEEeeecCH
Confidence            9996443220                                        111               124779999999


Q ss_pred             ccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCc---------------------
Q 013016          316 EVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM---------------------  373 (451)
Q Consensus       316 E~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------------  373 (451)
                      |+++|.. |+.++|+||+|||+.||+++++.|.+.+..+.+.+|.+....+....|+..                     
T Consensus       247 ELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~  326 (419)
T KOG0663|consen  247 ELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRK  326 (419)
T ss_pred             HHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhh
Confidence            9999965 899999999999999999999999999999888888874433332222211                     


Q ss_pred             ------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccC
Q 013016          374 ------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLT  421 (451)
Q Consensus       374 ------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~  421 (451)
                            .+....+|++.+|.+||.+|.|    |.|.|+|+||.+.+.+..+...
T Consensus       327 kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~h~~F~e~P~p~~P~~~  376 (419)
T KOG0663|consen  327 KFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLKHEYFRETPLPIDPSMF  376 (419)
T ss_pred             hccccccchhHHHHHHHHhccCcccccc----HHHhhcccccccCCCCCChhhc
Confidence                  1235679999999999999999    9999999999998877655443

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-50  Score=384.93  Aligned_cols=270  Identities=34%  Similarity=0.580  Sum_probs=225.6

Q ss_pred             CCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-----------HHHHHHHHHHH
Q 013016           74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-----------KVHRAEMEKKI  142 (451)
Q Consensus        74 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~  142 (451)
                      .....+++|++.+.||.|.||.|-+|++...++         +||||++.+.......           ..+++.+|+.+
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~---------l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIai  161 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGK---------LYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAI  161 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCc---------EEEEEeechhhhhhhcccccccccccCcHHHHHHHHHH
Confidence            334567899999999999999999999887766         6999999876543221           23567889999


Q ss_pred             HHHCCCCCccceeEEEEeC--CeEEEEEeeccCCchhhhhhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          143 LKMLDHPFLPTLYAEFEAS--NFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       143 l~~l~h~nIv~l~~~~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      |++++|||||+|+++..+.  +++|||+|||..|.+...-..   ++ +++.++++++++++.||+|||.+|||||||||
T Consensus       162 lKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKP  238 (576)
T KOG0585|consen  162 LKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKP  238 (576)
T ss_pred             HHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccch
Confidence            9999999999999999765  599999999999888654322   34 89999999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +|+||+++|++||+|||.+.........                                                 +..
T Consensus       239 sNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------------------------~~d  269 (576)
T KOG0585|consen  239 SNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------------------------GSD  269 (576)
T ss_pred             hheEEcCCCcEEeeccceeeecccCCcc-------------------------------------------------ccH
Confidence            9999999999999999998543211000                                                 000


Q ss_pred             cccccccccCCCccCcccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcCh
Q 013016          300 AARSCSFVGTHEYVSPEVASGGS----HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE  375 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  375 (451)
                      ... ...+|||.|||||.+.++.    .+.+.||||+||+||.|+.|+.||.+....+.+.+|++..+.+|...  .+.+
T Consensus       270 ~~L-~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~p--e~~e  346 (576)
T KOG0585|consen  270 DQL-SRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENP--EINE  346 (576)
T ss_pred             HHH-hhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcc--cccH
Confidence            000 0138999999999998733    37899999999999999999999999999999999999999888764  2233


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                       .+++||++||++||+.|.+    +.+|..|||...-
T Consensus       347 -~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  347 -DLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTRD  378 (576)
T ss_pred             -HHHHHHHHHhhcChhheee----hhhheecceeccC
Confidence             8999999999999999999    9999999999883

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-49  Score=390.87  Aligned_cols=280  Identities=33%  Similarity=0.555  Sum_probs=237.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.+..+++         .||||++.+...........+..|+.++..++|+||+++++++.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~   71 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGE---------IVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ   71 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCC---------EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE
Confidence            469999999999999999999887655         49999998776555555667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++.|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~  149 (333)
T cd05600          72 DDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSK  149 (333)
T ss_pred             cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence            999999999999999999999764  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                          .....+||+.|+|||++.
T Consensus       150 ~~~~----------------------------------------------------------~~~~~~gt~~y~aPE~~~  171 (333)
T cd05600         150 GIVT----------------------------------------------------------YANSVVGSPDYMAPEVLR  171 (333)
T ss_pred             cccc----------------------------------------------------------ccCCcccCccccChhHhc
Confidence            2210                                                          111347999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC---CcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS---SMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +..++.++|||||||++|||++|..||...+..+.+..+.............   ...+.++.+||.+||..+|.+||+ 
T Consensus       172 ~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s-  250 (333)
T cd05600         172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS-  250 (333)
T ss_pred             CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC-
Confidence            9899999999999999999999999999887777776665433221111111   122448999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCC
Q 013016          397 KRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK  432 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~  432 (451)
                         +.++++||||.++++.......+|++|......
T Consensus       251 ---~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (333)
T cd05600         251 ---LEDIKNHPFFKEVDWNELRELKPPFVPELESEI  283 (333)
T ss_pred             ---HHHHHhCcccCCCCHHHHhhCCCCCCCCCCCcc
Confidence               999999999999999888888888888766543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.6e-50  Score=360.42  Aligned_cols=266  Identities=27%  Similarity=0.386  Sum_probs=223.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|...++||+|.||.||+|++..+++.         ||||.++..... +.......+|++.|+.++|+||+.++++|.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~---------VAIKKIkl~~~k-dGi~~talREIK~Lqel~h~nIi~LiD~F~   71 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKR---------VAIKKIKLGNAK-DGINRTALREIKLLQELKHPNIIELIDVFP   71 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcE---------EEEEEeeccccc-cCccHHHHHHHHHHHHccCcchhhhhhhcc
Confidence            4688899999999999999999888764         999999865322 222345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+.||+||+ ..+|...++.. ...++..+++.++.++++||+|||+++|+||||||+|+||+.+|.+||+|||+|+
T Consensus        72 ~~~~l~lVfEfm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr  149 (318)
T KOG0659|consen   72 HKSNLSLVFEFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLAR  149 (318)
T ss_pred             CCCceEEEEEec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchh
Confidence            999999999999 67898888765 4569999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                     ...  .-+-|.+|+|||++.
T Consensus       150 ~f~~p~~-----------------------------------------------------~~~--~~V~TRWYRAPELLf  174 (318)
T KOG0659|consen  150 FFGSPNR-----------------------------------------------------IQT--HQVVTRWYRAPELLF  174 (318)
T ss_pred             ccCCCCc-----------------------------------------------------ccc--cceeeeeccChHHhc
Confidence            4332111                                                     111  116789999999999


Q ss_pred             CCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcC-----------------------h
Q 013016          320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS-----------------------E  375 (451)
Q Consensus       320 ~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------------~  375 (451)
                      |.. |+..+||||.|||+.||+-|.+.|.+.++-+.+..|.+....+....|+++.                       +
T Consensus       175 Gsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas  254 (318)
T KOG0659|consen  175 GSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAAS  254 (318)
T ss_pred             cchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccccccc
Confidence            954 8999999999999999999999999999999888888755444333333221                       2


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      .++.+|+.+||..||.+|++    +.|+|+|+||+..+.+.
T Consensus       255 ~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  255 SDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSLPLPT  291 (318)
T ss_pred             HHHHHHHHhhhccCchhccc----HHHHhcchhhhcCCCCC
Confidence            26789999999999999999    99999999999865544

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=8e-50  Score=384.03  Aligned_cols=276  Identities=35%  Similarity=0.576  Sum_probs=225.5

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.+.||+|+||+||+|.+..+++         .||+|++.+...........+..|+.++++++|+||+++++++.+.
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~   72 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK   72 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCc---------eEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence            7889999999999999999887765         4999999876554444445667899999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +.+|+||||+++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~  152 (285)
T cd05631          73 DALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQI  152 (285)
T ss_pred             CeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence            99999999999999998876655556999999999999999999999999999999999999999999999999997432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ...                                                        .......||..|+|||++.+.
T Consensus       153 ~~~--------------------------------------------------------~~~~~~~g~~~y~aPE~~~~~  176 (285)
T cd05631         153 PEG--------------------------------------------------------ETVRGRVGTVGYMAPEVINNE  176 (285)
T ss_pred             CCC--------------------------------------------------------CeecCCCCCCCccCHhhhcCC
Confidence            100                                                        000123689999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .++.++|||||||++|+|++|+.||........    ...+......++.     ..+.++.+|+++||+.||.+||+.+
T Consensus       177 ~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05631         177 KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE-----KFSEDAKSICRMLLTKNPKERLGCR  251 (285)
T ss_pred             CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCc-----cCCHHHHHHHHHHhhcCHHHhcCCC
Confidence            999999999999999999999999987554322    2222222222222     2334899999999999999999742


Q ss_pred             -CChHHHHcCCCcCCCCcccc--cccCCCCCCC
Q 013016          398 -RGAADVKTHPFFKGLNFALI--RSLTPPEIPG  427 (451)
Q Consensus       398 -~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~  427 (451)
                       ..++++++||||+++++..+  +.+.+|+.|-
T Consensus       252 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         252 GNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             CCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence             23899999999999999866  5557777774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.3e-49  Score=393.91  Aligned_cols=309  Identities=29%  Similarity=0.490  Sum_probs=231.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+..|+.++..++|+||+++++.+.
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~   71 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGH---------VYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ   71 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCC---------EEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            479999999999999999999887655         49999998766555556677788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+.+||||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~  149 (363)
T cd05628          72 DKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCT  149 (363)
T ss_pred             cCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence            999999999999999999998764  569999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ................              .....+...........     . .............+||+.|+|||++.
T Consensus       150 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~Gt~~Y~aPE~~~  209 (363)
T cd05628         150 GLKKAHRTEFYRNLNH--------------SLPSDFTFQNMNSKRKA-----E-TWKRNRRQLAFSTVGTPDYIAPEVFM  209 (363)
T ss_pred             cccccccccccccccc--------------ccccccccccccccccc-----c-hhhhccccccccccCCccccCHHHHc
Confidence            4321110000000000              00000000000000000     0 00000111123458999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--CCCCCCCCCcChHHHHHHHHHhcccCcCC---cC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL--TFPTQSPSSMSEYHARDLISGLLNKDPCN---RL  394 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~ll~~~L~~dP~~---Rp  394 (451)
                      +..++.++|||||||++|||++|+.||.+....+.+.++.....  .++..  .. .+.++++||.+|+. +|.+   ||
T Consensus       210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~-~s~~~~~li~~l~~-~~~~r~~r~  285 (363)
T cd05628         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE--VP-ISEKAKDLILRFCC-EWEHRIGAP  285 (363)
T ss_pred             CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc--CC-CCHHHHHHHHHHcC-ChhhcCCCC
Confidence            99999999999999999999999999998888888888876432  23321  12 23489999999775 5554   57


Q ss_pred             CCCCChHHHHcCCCcCCCCcccccccCCCCCCC
Q 013016          395 GSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG  427 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~  427 (451)
                      +    ++||++||||++++|.......++..+.
T Consensus       286 ~----~~ei~~hp~f~~~~~~~~~~~~~~~~~~  314 (363)
T cd05628         286 G----VEEIKTNPFFEGVDWEHIRERPAAIPIE  314 (363)
T ss_pred             C----HHHHhCCCCCCCCCHHHHHhCCCCCCcc
Confidence            8    9999999999999998876554444333

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.4e-49  Score=389.33  Aligned_cols=288  Identities=37%  Similarity=0.669  Sum_probs=237.3

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||+|.++.+++         .||+|++.+...........+..|+.+++.++||||++++++|...+.+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~   71 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   71 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEE
Confidence            369999999999999877665         49999998776555555666778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||++||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... 
T Consensus        72 lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-  148 (323)
T cd05595          72 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-  148 (323)
T ss_pred             EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-
Confidence            999999999999888764  46899999999999999999999999999999999999999999999999987421100 


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                                                                            ........||+.|+|||++.+..++.
T Consensus       149 ------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05595         149 ------------------------------------------------------GATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             ------------------------------------------------------CCccccccCCcCcCCcccccCCCCCc
Confidence                                                                  00011247999999999999989999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~ell  404 (451)
                      ++|||||||++|+|++|+.||...........+......++..     .+.++.+||.+||+.||.+|++. ...+.+++
T Consensus       175 ~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l  249 (323)
T cd05595         175 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM  249 (323)
T ss_pred             hhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHH
Confidence            9999999999999999999999888888888877766655543     23489999999999999999821 01199999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCc
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQ  444 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~  444 (451)
                      +|+||.+++|...  ..+.+|..|...++....+.+...+.+
T Consensus       250 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05595         250 EHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQ  291 (323)
T ss_pred             cCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcccccC
Confidence            9999999988643  556677777777665555555544444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-52  Score=367.58  Aligned_cols=259  Identities=28%  Similarity=0.523  Sum_probs=232.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|.|+.||+|.+..++++         +|+|+++-..+... ..+.+.+|+.|.+.|+|||||++.+...
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~---------fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~   80 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLE---------FAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ   80 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHH---------HHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhc
Confidence            6799999999999999999998887765         99999987766544 6788899999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhh-hhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEEecc
Q 013016          160 ASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDF  235 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~Df  235 (451)
                      +.++.|||+|++.|++|.. +..+   ..+++..+-++++||++||.|+|.+||||||+||.|+|+.+.   --+||+||
T Consensus        81 ~~~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~F  157 (355)
T KOG0033|consen   81 EESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADF  157 (355)
T ss_pred             ccceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeeccc
Confidence            9999999999999999975 3343   347899999999999999999999999999999999999754   36999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|+..+.                                                        ......++|||+||||
T Consensus       158 GvAi~l~~--------------------------------------------------------g~~~~G~~GtP~fmaP  181 (355)
T KOG0033|consen  158 GLAIEVND--------------------------------------------------------GEAWHGFAGTPGYLSP  181 (355)
T ss_pred             ceEEEeCC--------------------------------------------------------ccccccccCCCcccCH
Confidence            99964431                                                        1122246899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++...+|+..+|||+.|+|||-||.|.+||.+.+....+..|+.+...++...++.+.+ ++++||++||..||.+|.|
T Consensus       182 Evvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~-~Ak~LvrrML~~dP~kRIt  260 (355)
T KOG0033|consen  182 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTP-EAKSLIRRMLTVNPKKRIT  260 (355)
T ss_pred             HHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCH-HHHHHHHHHhccChhhhcc
Confidence            999999999999999999999999999999999999999999999999999888888777 9999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCC
Q 013016          396 SKRGAADVKTHPFFKGL  412 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~  412 (451)
                          +.|.|+|||+.+.
T Consensus       261 ----a~EAL~HpWi~~r  273 (355)
T KOG0033|consen  261 ----ADEALKHPWICNR  273 (355)
T ss_pred             ----HHHHhCCchhcch
Confidence                9999999999983

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-50  Score=398.68  Aligned_cols=325  Identities=31%  Similarity=0.531  Sum_probs=238.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++.+...........+..|+.++++++||||+++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~   71 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGK---------IYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ   71 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCC---------EEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            479999999999999999999887765         49999998765545556677888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+++||||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          72 DAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             cCCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            999999999999999999998764  558999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCC--CCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          240 CSNAIPAVESPA--SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       240 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      ............  ..........  ..+ ....+..............       .............+||+.|+|||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~gt~~y~aPE~  219 (377)
T cd05629         150 GFHKQHDSAYYQKLLQGKSNKNRI--DNR-NSVAVDSINLTMSSKDQIA-------TWKKNRRLMAYSTVGTPDYIAPEI  219 (377)
T ss_pred             cccccccccccccccccccccccc--ccc-cccccccccccccchhhhh-------hhhhcccccccccCCCccccCHHH
Confidence            332111000000  0000000000  000 0000000000000000000       000000011123579999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc---C
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR---L  394 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R---p  394 (451)
                      +.+..++.++|||||||++|||++|..||......+.+..+............ ...+.++.+||.+||. +|.+|   +
T Consensus       220 ~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dli~~lL~-~~~~r~~r~  297 (377)
T cd05629         220 FLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDD-IHLSVEAEDLIRRLIT-NAENRLGRG  297 (377)
T ss_pred             HccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCC-CCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence            99989999999999999999999999999988777777777653322221111 1234489999999998 77776   4


Q ss_pred             CCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          395 GSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      +    +.|++.||||++++|...+...+|.+|.....
T Consensus       298 ~----~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~  330 (377)
T cd05629         298 G----AHEIKSHPFFRGVDWDTIRQIRAPFIPQLKSI  330 (377)
T ss_pred             C----HHHHhcCCCcCCCCHHHHccCCCCcccCCCCc
Confidence            8    99999999999999998889999999887654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-49  Score=395.99  Aligned_cols=320  Identities=33%  Similarity=0.573  Sum_probs=240.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||+||+|.++.+++         .||||++.+...........+..|+.+++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~   71 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGH---------IYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ   71 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence            479999999999999999999887665         49999998765545555667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  149 (364)
T cd05599          72 DENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT  149 (364)
T ss_pred             cCCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccce
Confidence            999999999999999999998764  459999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhcc-ccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNR-FFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ....................           ........ ........       .............+||+.|+|||++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~gt~~y~aPE~~  211 (364)
T cd05599         150 GLKKSHRTEFYRILSHALPS-----------NFLDFISKPMSSKRKAE-------TWKRNRRALAYSTVGTPDYIAPEVF  211 (364)
T ss_pred             eccccccccccccccccccc-----------ccccccccccccccccc-------chhhcccccccccccCccccCHHHH
Confidence            43211110000000000000           00000000 00000000       0000001112235899999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|||||||++|+|++|..||......+....+......+...... ..+.++.+||.+||. +|.+|++. .
T Consensus       212 ~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~s~~~~~li~~ll~-~p~~R~~~-~  288 (364)
T cd05599         212 LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEV-PLSPEAKDLIKRLCC-EAERRLGN-N  288 (364)
T ss_pred             cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCC-CCCHHHHHHHHHHcc-CHhhcCCC-C
Confidence            99899999999999999999999999999888887777776654332221111 234489999999997 99999863 3


Q ss_pred             ChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      .+.+++.||||++++|.......+|.+|.....
T Consensus       289 ~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~  321 (364)
T cd05599         289 GVNEIKSHPFFKGVDWEHIRERPAPIIPELKSI  321 (364)
T ss_pred             CHHHHhcCCCcCCCCHHHHhhcCCCCCCCCCCc
Confidence            399999999999999988877888888876654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.4e-49  Score=390.00  Aligned_cols=285  Identities=38%  Similarity=0.683  Sum_probs=234.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||+|.++.+++         .||+|++.+...........+.+|+.+++.++||||+++++++...+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   71 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGK---------YYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLC   71 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEE
Confidence            369999999999999877665         49999998776555556677788999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+++|+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... 
T Consensus        72 lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-  148 (328)
T cd05593          72 FVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-  148 (328)
T ss_pred             EEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-
Confidence            999999999999888664  45899999999999999999999999999999999999999999999999997421100 


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                                                                            .......+||+.|+|||++.+..++.
T Consensus       149 ------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593         149 ------------------------------------------------------AATMKTFCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             ------------------------------------------------------ccccccccCCcCccChhhhcCCCCCc
Confidence                                                                  00111347999999999999988999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~ell  404 (451)
                      ++|||||||++|+|++|+.||......+....+......++..     .+.++.+||.+||..||.+|++. ...+.+++
T Consensus       175 ~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il  249 (328)
T cd05593         175 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT-----LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIM  249 (328)
T ss_pred             cCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCC-----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence            9999999999999999999999887777777777666555443     23489999999999999999721 01199999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCcc
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKI  441 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~  441 (451)
                      +||||.+.+|...  ....+|..|...++...++.+...
T Consensus       250 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (328)
T cd05593         250 RHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEF  288 (328)
T ss_pred             cCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCccc
Confidence            9999999988644  455666667766655555444433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-51  Score=372.56  Aligned_cols=304  Identities=37%  Similarity=0.683  Sum_probs=272.1

Q ss_pred             CCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccc
Q 013016           74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        74 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      +...+.++|..+++||+|.||+|-+|+.+.+++         +||+|+++++.......+..-..|-.+|+..+||.+..
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k---------~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~  232 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGK---------LYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTS  232 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCc---------eeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHH
Confidence            444566899999999999999999999888776         69999999998877777777778999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +.-.|+..+++|+||||+.||.|.-++.+.  ..|++...+.+...|+.||.|||+++||+||||.+|+|++.||.+||+
T Consensus       233 LKYsFQt~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKit  310 (516)
T KOG0690|consen  233 LKYSFQTQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKIT  310 (516)
T ss_pred             hhhhhccCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEee
Confidence            999999999999999999999998777664  569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+..-                                                       ....++.++||||.|.
T Consensus       311 DFGLCKE~I-------------------------------------------------------~~g~t~kTFCGTPEYL  335 (516)
T KOG0690|consen  311 DFGLCKEEI-------------------------------------------------------KYGDTTKTFCGTPEYL  335 (516)
T ss_pred             ecccchhcc-------------------------------------------------------cccceeccccCChhhc
Confidence            999985210                                                       1234556899999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |||++....|+.++|.|.+|||||||++|+.||...+.+..+..|+.+.+.+|....+     +++.|+..+|.+||.+|
T Consensus       336 APEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~-----eAktLLsGLL~kdP~kR  410 (516)
T KOG0690|consen  336 APEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSP-----EAKTLLSGLLKKDPKKR  410 (516)
T ss_pred             CchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCH-----HHHHHHHHHhhcChHhh
Confidence            9999999999999999999999999999999999999999999999999888876554     89999999999999999


Q ss_pred             CCC-CCChHHHHcCCCcCCCCccc--ccccCCCCCCCCCCCCCCCCCCCccCCccccC
Q 013016          394 LGS-KRGAADVKTHPFFKGLNFAL--IRSLTPPEIPGMRRQKTMPFPDQKIKSQSTAF  448 (451)
Q Consensus       394 pt~-~~~~~ell~hp~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  448 (451)
                      ... ...+.||..|+||..++|..  ..++.||+.|.+.+...-.|+++....|+-.+
T Consensus       411 LGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT~q~v~l  468 (516)
T KOG0690|consen  411 LGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFTSQPVTL  468 (516)
T ss_pred             cCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhhcceeEe
Confidence            985 45589999999999999974  58999999999999988888888877776443

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-50  Score=356.61  Aligned_cols=262  Identities=33%  Similarity=0.567  Sum_probs=239.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+.+++|++.+.||.|-||.||+|+.+.+.-         .||+||+.+.........+.+.+|++|...|+||||+++|
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~---------IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY   88 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLF---------IVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLY   88 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCCc---------EEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhh
Confidence            3456899999999999999999999887765         5999999998887777788889999999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++|-+....||++||..+|+|.+.+...+...+++.....++.|++.||.|+|.++|+||||||+|+|++.+|.+||+||
T Consensus        89 ~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdf  168 (281)
T KOG0580|consen   89 GYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADF  168 (281)
T ss_pred             hheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCC
Confidence            99999999999999999999999999888888999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |-+....                                                         ..+..++|||..|.+|
T Consensus       169 GwsV~~p---------------------------------------------------------~~kR~tlcgt~dyl~p  191 (281)
T KOG0580|consen  169 GWSVHAP---------------------------------------------------------SNKRKTLCGTLDYLPP  191 (281)
T ss_pred             CceeecC---------------------------------------------------------CCCceeeecccccCCH
Confidence            9974211                                                         2233467999999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |...+..++..+|+|++|++.||++.|.+||...+..+.+++|......+|.....     ++.++|.+||.++|.+|.+
T Consensus       192 Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~-----~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  192 EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISG-----GAADLISRLLVKNPIERLA  266 (281)
T ss_pred             hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccCh-----hHHHHHHHHhccCcccccc
Confidence            99999999999999999999999999999999999999999999998888854433     8999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCC
Q 013016          396 SKRGAADVKTHPFFKGL  412 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~  412 (451)
                          ..|++.|||....
T Consensus       267 ----l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  267 ----LTEVMDHPWIVAN  279 (281)
T ss_pred             ----HHHHhhhHHHHhc
Confidence                9999999998764

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.3e-49  Score=395.87  Aligned_cols=323  Identities=30%  Similarity=0.482  Sum_probs=236.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+.+|+.+++.++|+||+++++.+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~   71 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNA---------LYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ   71 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCC---------EEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            369999999999999999999887655         49999998765545555667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          72 DKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            999999999999999999998764  458999999999999999999999999999999999999999999999999975


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ................. ...    .       .................................++||+.|||||++.
T Consensus       150 ~~~~~~~~~~~~~~~~~-~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  217 (376)
T cd05598         150 GFRWTHDSKYYQKGDHH-RQD----S-------MEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL  217 (376)
T ss_pred             ccccccccccccccccc-ccc----c-------ccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc
Confidence            33211110000000000 000    0       00000000000000000000000000111223468999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC---CC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL---GS  396 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp---t~  396 (451)
                      +..++.++|||||||++|+|++|+.||......+....+.............. .+.++.++|.+|+ .+|.+|+   + 
T Consensus       218 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~l~-~~p~~R~~~~t-  294 (376)
T cd05598         218 RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAK-LSREASDLILRLC-CGAEDRLGKNG-  294 (376)
T ss_pred             CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCC-CCHHHHHHHHHHh-cCHhhcCCCCC-
Confidence            99999999999999999999999999998877776666655433332222222 3348899999976 5999999   7 


Q ss_pred             CCChHHHHcCCCcCCCCcccc-cccCCCCCCCCCCC
Q 013016          397 KRGAADVKTHPFFKGLNFALI-RSLTPPEIPGMRRQ  431 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~~~~-~~~~~~~~p~~~~~  431 (451)
                         +.++++||||+++++... ....+|.+|....+
T Consensus       295 ---~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (376)
T cd05598         295 ---ADEIKAHPFFKGIDFASLIRRQKAPYIPKITHP  327 (376)
T ss_pred             ---HHHHhCCCCcCCCCHHHHhhcCCCCCCCcCCCc
Confidence               999999999999999866 56667777776543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=7.4e-49  Score=384.32  Aligned_cols=279  Identities=34%  Similarity=0.677  Sum_probs=231.8

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC-CccceeEEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP-FLPTLYAEFE  159 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-nIv~l~~~~~  159 (451)
                      +|.+.+.||+|+||.||+|.++.+.+         .||||++.+...........+..|+.++..+.|+ +|+.+++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDE---------LYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ   71 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE
Confidence            58999999999999999999887665         4999999877554445566677889999999765 5888999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05587          72 TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCK  149 (324)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcce
Confidence            999999999999999999988764  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       ........+||+.|+|||++.
T Consensus       150 ~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  174 (324)
T cd05587         150 ENIF-------------------------------------------------------GGKTTRTFCGTPDYIAPEIIA  174 (324)
T ss_pred             ecCC-------------------------------------------------------CCCceeeecCCccccChhhhc
Confidence            2100                                                       000111347999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC-C
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-R  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~-~  398 (451)
                      +..++.++|||||||++|+|++|+.||......+.+..+......++..     .+.++.+++.+||+.||.+|++.+ .
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~~l~~~P~~R~~~~~~  249 (324)
T cd05587         175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS-----LSKEAVSICKGLLTKHPAKRLGCGPT  249 (324)
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence            9899999999999999999999999999988888888888776655543     233899999999999999999842 2


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ..+++++||||++++|...  +...+|..|..++
T Consensus       250 ~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd05587         250 GERDIREHAFFRRIDWEKLERREIQPPFKPKVKG  283 (324)
T ss_pred             CHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCC
Confidence            2489999999999999654  3445555565544

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=3.9e-49  Score=385.55  Aligned_cols=275  Identities=39%  Similarity=0.716  Sum_probs=230.0

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||||++.+...........+..|..++..+ +||||+++++++...+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   71 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGR---------LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRL   71 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCC---------EEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEE
Confidence            369999999999999887665         4999999877554455566677788888876 699999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~-  148 (320)
T cd05590          72 FFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-  148 (320)
T ss_pred             EEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc-
Confidence            9999999999999888765  4599999999999999999999999999999999999999999999999999742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            .........||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (320)
T cd05590         149 ------------------------------------------------------NGKTTSTFCGTPDYIAPEILQEMLYG  174 (320)
T ss_pred             ------------------------------------------------------CCCcccccccCccccCHHHHcCCCCC
Confidence                                                                  00011234799999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC--CChHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK--RGAAD  402 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~--~~~~e  402 (451)
                      .++|||||||++|+|++|+.||......+.+..+......++..     .+.++.+||.+||+.||.+|+++.  ...++
T Consensus       175 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~  249 (320)
T cd05590         175 PSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW-----LSQDAVDILKAFMTKNPTMRLGSLTLGGEEA  249 (320)
T ss_pred             CccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHcccCHHHCCCCCCCCCHHH
Confidence            99999999999999999999999988888888888776655443     334899999999999999999921  11289


Q ss_pred             HHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          403 VKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       403 ll~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      +++||||++++|...  +...+|..|+..+.
T Consensus       250 ~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~  280 (320)
T cd05590         250 ILRHPFFKELDWEKLNRRQIEPPFRPRIKSR  280 (320)
T ss_pred             HHcCCCcCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            999999999998754  56677777877653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=6.5e-49  Score=384.69  Aligned_cols=279  Identities=36%  Similarity=0.678  Sum_probs=230.9

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHH---HHCCCCCccceeEEE
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL---KMLDHPFLPTLYAEF  158 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~nIv~l~~~~  158 (451)
                      |.+.+.||+|+||.||+|.++.+++         .||||++.+...........+..|+.++   +.++||||+++++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~   71 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGE---------LYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF   71 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE
Confidence            7889999999999999999887665         4999999876544444455666666655   456799999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...++.|+||||++|++|..++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        72 ~~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05589          72 QTEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLC  148 (324)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCC
Confidence            999999999999999999887754   45999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                       .......++|++.|+|||++
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~g~~~y~aPE~~  173 (324)
T cd05589         149 KEGMG-------------------------------------------------------FGDRTSTFCGTPEFLAPEVL  173 (324)
T ss_pred             ccCCC-------------------------------------------------------CCCcccccccCccccCHhHh
Confidence            42110                                                       00111235799999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|||||||++|+|++|+.||......+.+..+......++..     .+..+.+||.+||+.||.+||++++
T Consensus       174 ~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~  248 (324)
T cd05589         174 TETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF-----LSREAISIMRRLLRRNPERRLGSGE  248 (324)
T ss_pred             cCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            99889999999999999999999999999988888888887776655433     2348999999999999999995422


Q ss_pred             -ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCC
Q 013016          399 -GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK  432 (451)
Q Consensus       399 -~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~  432 (451)
                       .+.++++||||+.+++...  ....+|.+|......
T Consensus       249 ~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd05589         249 KDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPE  285 (324)
T ss_pred             CCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcc
Confidence             3999999999999888653  556677777765543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2.8e-49  Score=388.20  Aligned_cols=283  Identities=35%  Similarity=0.610  Sum_probs=236.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||+|++.+...........+..|+.+++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~   71 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGD---------IYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ   71 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe
Confidence            479999999999999999999887665         49999999776555556667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.++.|+||||++||+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~  150 (330)
T cd05601          72 DKDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAA  150 (330)
T ss_pred             cCCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCe
Confidence            9999999999999999999987753 459999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                      ........||+.|+|||++.
T Consensus       151 ~~~~~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         151 RLTANK------------------------------------------------------MVNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             ECCCCC------------------------------------------------------ceeeecccCCccccCHHHhc
Confidence            321100                                                      00111236899999999986


Q ss_pred             ------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          320 ------GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       320 ------~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                            +..++.++|||||||++|+|++|+.||........+.++............ ...+.++.+||.+||. ||.+|
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~li~~ll~-~p~~R  254 (330)
T cd05601         177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED-PKVSSDFLDLIQSLLC-GQKER  254 (330)
T ss_pred             cccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCC-CCCCHHHHHHHHHHcc-ChhhC
Confidence                  456789999999999999999999999988877777777664322211111 1234489999999998 99999


Q ss_pred             CCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCC
Q 013016          394 LGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK  432 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~  432 (451)
                      |+    +.+++.||||++++|.......+|..|...+..
T Consensus       255 ~t----~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (330)
T cd05601         255 LG----YEGLCCHPFFSKIDWNNIRNSLPPFVPTLKSDD  289 (330)
T ss_pred             CC----HHHHhCCCCcCCCCHHHHhhCCCCccCcCCCcc
Confidence            99    999999999999999988888888888776644

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=7.4e-49  Score=392.79  Aligned_cols=327  Identities=30%  Similarity=0.494  Sum_probs=234.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|.++++||+|+||+||+|.++.+++         .||||++.+...........+..|+.+++.++|+||+++++++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~---------~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~   72 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHA---------LYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD   72 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec
Confidence            58999999999999999999887765         499999987765555666778889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+++|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          73 KDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            99999999999999999998765  4589999999999999999999999999999999999999999999999999754


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ...................................     + .....+...  ...........+++||+.|+|||++.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~--~~~~~~~~~~~~~~gt~~Y~aPE~~~~  222 (381)
T cd05626         151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC-----G-DRLKTLEQR--ATKQHQRCLAHSLVGTPNYIAPEVLLR  222 (381)
T ss_pred             cccccccccccccccccccccCccccccccccccc-----c-cccchhhcc--ccccccccccccccCCccccCHHHHcC
Confidence            32111100000000000000000000000000000     0 000000000  000001112235689999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc--cCcCCcCCCCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN--KDPCNRLGSKR  398 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~--~dP~~Rpt~~~  398 (451)
                      ..++.++|||||||++|||++|+.||......+....+.............. .+.++.+||.+|+.  .++..|++   
T Consensus       223 ~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~dli~~ll~~~~~~~~R~~---  298 (381)
T cd05626         223 KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVK-LSPEAVDLITKLCCSAEERLGRNG---  298 (381)
T ss_pred             CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCC-CCHHHHHHHHHHccCcccccCCCC---
Confidence            8899999999999999999999999998777666666654322222111112 33489999999664  45556999   


Q ss_pred             ChHHHHcCCCcCCCCccc-ccccCCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFAL-IRSLTPPEIPGMRRQ  431 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~-~~~~~~~~~p~~~~~  431 (451)
                       +.+|+.||||++++|.. .+..++|.+|....+
T Consensus       299 -~~~~l~hp~f~~~~~~~~~~~~~~~~~p~~~~~  331 (381)
T cd05626         299 -ADDIKAHPFFSEVDFSSDIRTQPAPYVPKISHP  331 (381)
T ss_pred             -HHHHhcCcccCCCChhHHhhcCCCCccCcCCCc
Confidence             99999999999998864 456666777776543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-49  Score=383.08  Aligned_cols=270  Identities=37%  Similarity=0.722  Sum_probs=226.5

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||+|+||.||+|.++.+++         .||+|++.+...........+..|+.++++++||||+++++++...+..|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~---------~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   71 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQR---------IYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLV   71 (312)
T ss_pred             CCcCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEE
Confidence            7999999999999887665         4999999876554555566777899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||++||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....    
T Consensus        72 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~----  145 (312)
T cd05585          72 LAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK----  145 (312)
T ss_pred             EcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCcc----
Confidence            9999999999988764  4699999999999999999999999999999999999999999999999999742110    


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                                                                         ........+||+.|+|||++.+..++.++
T Consensus       146 ---------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  174 (312)
T cd05585         146 ---------------------------------------------------DDDKTNTFCGTPEYLAPELLLGHGYTKAV  174 (312)
T ss_pred             ---------------------------------------------------CCCccccccCCcccCCHHHHcCCCCCCcc
Confidence                                                               00111234799999999999998999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCC
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP  407 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp  407 (451)
                      |||||||++|+|++|+.||......+.+..+......++...     +.++.+||.+||+.||.+||+... +.|++.||
T Consensus       175 DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~~L~~dp~~R~~~~~-~~e~l~hp  248 (312)
T cd05585         175 DWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGF-----DRDAKDLLIGLLSRDPTRRLGYNG-AQEIKNHP  248 (312)
T ss_pred             ceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcC-----CHHHHHHHHHHcCCCHHHcCCCCC-HHHHHcCC
Confidence            999999999999999999998888888888887766655432     338999999999999999985321 89999999


Q ss_pred             CcCCCCcccc--cccCCCCCCCCC
Q 013016          408 FFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       408 ~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      ||.+.++...  ....++..|...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~  272 (312)
T cd05585         249 FFSQLSWKKLLMKGIQPPFKPAVS  272 (312)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCC
Confidence            9999877543  344455555544

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-50  Score=379.21  Aligned_cols=263  Identities=29%  Similarity=0.485  Sum_probs=213.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|...+.||+|+||.||++.++.+++         .+|||.+.....   ...+.+++|+.+|.+++|||||+.+|...
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~---------~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~   84 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGE---------LMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSS   84 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCc---------ceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccc
Confidence            457888899999999999999987544         499999986521   11566788999999999999999999754


Q ss_pred             eCC--eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccC
Q 013016          160 ASN--FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFD  236 (451)
Q Consensus       160 ~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg  236 (451)
                      ...  .+++.|||++||+|.+++....+ .+++..++.+++||++||+|||++||||+||||+|||++. ++.+||+|||
T Consensus        85 ~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG  163 (313)
T KOG0198|consen   85 SRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFG  163 (313)
T ss_pred             cccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCc
Confidence            443  79999999999999999998865 7999999999999999999999999999999999999999 7999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++......                                                    ........+.||+.|||||
T Consensus       164 ~a~~~~~~~----------------------------------------------------~~~~~~~~~~Gtp~~maPE  191 (313)
T KOG0198|consen  164 LAKKLESKG----------------------------------------------------TKSDSELSVQGTPNYMAPE  191 (313)
T ss_pred             ccccccccc----------------------------------------------------ccccccccccCCccccCch
Confidence            985432100                                                    0011122458999999999


Q ss_pred             cccCCC-CCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          317 VASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       317 ~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ++..+. ...++|||||||++.||+||+.||.. ......+..+.... ..| ..++. .+.++++||.+||.+||++||
T Consensus       192 vi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P-~ip~~-ls~~a~~Fl~~C~~~~p~~Rp  268 (313)
T KOG0198|consen  192 VIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP-EIPDS-LSDEAKDFLRKCFKRDPEKRP  268 (313)
T ss_pred             hhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC-CCCcc-cCHHHHHHHHHHhhcCcccCc
Confidence            999633 34599999999999999999999987 34444444444443 222 22333 344999999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCCc
Q 013016          395 GSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~  414 (451)
                      |    |.++|+|||.++...
T Consensus       269 t----a~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  269 T----AEELLEHPFLKQNSI  284 (313)
T ss_pred             C----HHHHhhChhhhcccc
Confidence            9    999999999998444

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.5e-49  Score=386.76  Aligned_cols=284  Identities=37%  Similarity=0.680  Sum_probs=234.6

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||+||+|.++.+++         .||+|++.+...........+..|+.+++.++|+||+++++++...+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~   71 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC   71 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEE
Confidence            369999999999999877655         49999998776555555566778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      +||||++||+|.+++...  ..+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||++......
T Consensus        72 lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~  149 (325)
T cd05594          72 FVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  149 (325)
T ss_pred             EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence            999999999999888664  458999999999999999999997 89999999999999999999999999997421100


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                             ........||+.|+|||++.+..++
T Consensus       150 -------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05594         150 -------------------------------------------------------GATMKTFCGTPEYLAPEVLEDNDYG  174 (325)
T ss_pred             -------------------------------------------------------CcccccccCCcccCCHHHHccCCCC
Confidence                                                                   0011124799999999999998999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC-----CCCCC
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-----GSKRG  399 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp-----t~~~~  399 (451)
                      .++|||||||++|+|++|+.||...........+......++..     .+.++.+||.+||+.||++|+     +    
T Consensus       175 ~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~----  245 (325)
T cd05594         175 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT-----LSPEAKSLLSGLLKKDPKQRLGGGPDD----  245 (325)
T ss_pred             CccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHhhcCHHHhCCCCCCC----
Confidence            99999999999999999999999888877777777766655543     233899999999999999997     7    


Q ss_pred             hHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCc
Q 013016          400 AADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQ  444 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~  444 (451)
                      +.++++||||.++.|...  ....+|..|.........+.++....+
T Consensus       246 ~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (325)
T cd05594         246 AKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQ  292 (325)
T ss_pred             HHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCchhhcC
Confidence            999999999999888644  455566667666554444555544443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-50  Score=392.82  Aligned_cols=256  Identities=27%  Similarity=0.444  Sum_probs=220.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|....+||+|+.|.||.|....+.+.         ||||.+......   ..+.+.+|+.+|+..+|+|||.+++.|.
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~---------VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Syl  340 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQE---------VAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYL  340 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCce---------EEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhc
Confidence            4588899999999999999998887764         999999876443   3456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+++||||++||+|.+++...   .+++.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|.
T Consensus       341 v~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFca  417 (550)
T KOG0578|consen  341 VGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCA  417 (550)
T ss_pred             ccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeee
Confidence            999999999999999999988764   49999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       ...+..+++||+.|||||++.
T Consensus       418 qi~~-------------------------------------------------------~~~KR~TmVGTPYWMAPEVvt  442 (550)
T KOG0578|consen  418 QISE-------------------------------------------------------EQSKRSTMVGTPYWMAPEVVT  442 (550)
T ss_pred             cccc-------------------------------------------------------ccCccccccCCCCccchhhhh
Confidence            2211                                                       122445679999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      ...|+.++||||||++++||+.|++||-..+....+..|... ..+.......+.+ .+++||.+||+.|+++|++    
T Consensus       443 rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~lk~~~klS~-~~kdFL~~cL~~dv~~Ras----  516 (550)
T KOG0578|consen  443 RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKLKNPEKLSP-ELKDFLDRCLVVDVEQRAS----  516 (550)
T ss_pred             hcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCcCCccccCH-HHHHHHHHHhhcchhcCCC----
Confidence            999999999999999999999999999976666666655443 2333333334444 9999999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      |.|||+||||+.
T Consensus       517 A~eLL~HpFl~~  528 (550)
T KOG0578|consen  517 AKELLEHPFLKM  528 (550)
T ss_pred             HHHHhcChhhhh
Confidence            999999999965

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.2e-48  Score=391.54  Aligned_cols=324  Identities=31%  Similarity=0.530  Sum_probs=238.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.++++||+|+||+||+|.++.+++         .||+|++.+...........+..|+.+++.++|+||+++++.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~---------~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~   72 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKA---------LYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD   72 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCC---------EEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe
Confidence            58999999999999999999887665         499999987655555666778889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ++++|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          73 KDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            99999999999999999988764  4589999999999999999999999999999999999999999999999999753


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccc-c---ccCC-CcccccccccccccccccCCCccCc
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI-Q---TLTP-NRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      ............ .......           ...+... ++.... .   ...+ ..............+++||+.|+||
T Consensus       151 ~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  217 (382)
T cd05625         151 FRWTHDSKYYQS-GDHVRQD-----------SMDFSNE-WGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAP  217 (382)
T ss_pred             cccccccccccc-ccccccc-----------ccccccc-ccccccccccccccchhhhhccccccccccccccCcccCCH
Confidence            321111000000 0000000           0000000 000000 0   0000 0000000011122346899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|||++|+.||......+....+.............. .+.++.++|.+|+ .||.+|++
T Consensus       218 E~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~-~s~~~~~li~~l~-~~p~~R~~  295 (382)
T cd05625         218 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAK-LSPEASDLIIKLC-RGPEDRLG  295 (382)
T ss_pred             HHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCccc-CCHHHHHHHHHHc-cCHhHcCC
Confidence            999999999999999999999999999999998887777777765433322222222 3348999999976 59999986


Q ss_pred             CCCChHHHHcCCCcCCCCccc-ccccCCCCCCCCCCC
Q 013016          396 SKRGAADVKTHPFFKGLNFAL-IRSLTPPEIPGMRRQ  431 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~-~~~~~~~~~p~~~~~  431 (451)
                      . ..++++++||||+++++.. ..+..+|.+|....+
T Consensus       296 ~-~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~~  331 (382)
T cd05625         296 K-NGADEIKAHPFFKTIDFSSDLRQQSAPYIPKITHP  331 (382)
T ss_pred             C-CCHHHHhcCCCcCCcChHHHHhcCCCCccCcCCCc
Confidence            2 3389999999999999875 466677777877654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.3e-48  Score=382.16  Aligned_cols=274  Identities=35%  Similarity=0.697  Sum_probs=227.3

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      ++||+|+||.||+|.++.+++         .||||++.+...........+..|..++..+ +||||+++++++..++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~   71 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDE---------VYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRL   71 (321)
T ss_pred             CccccCCCeEEEEEEECCCCC---------EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeE
Confidence            369999999999999887655         4999999877554455556667788888866 799999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        72 ~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~  149 (321)
T cd05591          72 FFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN  149 (321)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC
Confidence            9999999999999888764  45899999999999999999999999999999999999999999999999997421100


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                             .......+||+.|+|||++.+..++
T Consensus       150 -------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05591         150 -------------------------------------------------------GVTTTTFCGTPDYIAPEILQELEYG  174 (321)
T ss_pred             -------------------------------------------------------CccccccccCccccCHHHHcCCCCC
Confidence                                                                   0011134789999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC---ChH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR---GAA  401 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~---~~~  401 (451)
                      .++|||||||++|+|++|+.||...+..+.+..+......++..     .+.++.+||.+||+.||++|++...   .+.
T Consensus       175 ~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~  249 (321)
T cd05591         175 PSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVW-----LSKEAVSILKAFMTKNPNKRLGCVASQGGED  249 (321)
T ss_pred             CccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhccCHHHcCCCCCCCCCHH
Confidence            99999999999999999999999988888888888876655433     3348999999999999999993211   299


Q ss_pred             HHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          402 DVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       402 ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ++++||||.+++|...  ....+|..|....
T Consensus       250 ~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~  280 (321)
T cd05591         250 AIKQHPFFKEIDWVLLEQRKIKPPFKPKIKT  280 (321)
T ss_pred             HHhcCCccCCCCHHHHHhCCCCCCCCCCCCC
Confidence            9999999999999754  4445555555543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-51  Score=366.74  Aligned_cols=250  Identities=27%  Similarity=0.409  Sum_probs=213.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE-
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA-  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~-  156 (451)
                      ++.+|++.++||.|+||+||++....++.         ++|.|-+..... +.+..+.+..|+.+|++|+|||||++++ 
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~---------l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~   86 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGK---------LVALKKIQFGMM-DAKARQDCVKEISLLKQLNHPNIVQYYAH   86 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcc---------hhhhhhcchhhc-cHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence            34679999999999999999999887765         599999986544 3455567788999999999999999998 


Q ss_pred             EEEeCCe-EEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeccCCCCcEEEccCCC
Q 013016          157 EFEASNF-SCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHM--LG--IIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       157 ~~~~~~~-~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~--~g--ivH~Dlkp~NIll~~~~~  229 (451)
                      .|.+++. ++||||||.+|+|.++++..+  .+.+++..+++++.|++.||.++|.  ..  |+||||||.||+++.+|.
T Consensus        87 ~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv  166 (375)
T KOG0591|consen   87 SFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV  166 (375)
T ss_pred             hhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc
Confidence            5544444 999999999999999987543  4569999999999999999999998  44  999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||+++.+...                                                       ..-+.+++||
T Consensus       167 vKLGDfGL~r~l~s~-------------------------------------------------------~tfA~S~VGT  191 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSSK-------------------------------------------------------TTFAHSLVGT  191 (375)
T ss_pred             eeeccchhHhHhcch-------------------------------------------------------hHHHHhhcCC
Confidence            999999998654321                                                       1222357999


Q ss_pred             CCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       310 ~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |.||+||.+.+.+|+.++||||+||++|||..-+.||.+.+-.+.-.+|.++..+.   .+...++.++..||..|+.+|
T Consensus       192 PyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~---~p~~~YS~~l~~li~~ci~vd  268 (375)
T KOG0591|consen  192 PYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP---LPDEHYSTDLRELINMCIAVD  268 (375)
T ss_pred             CcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC---CcHHHhhhHHHHHHHHHccCC
Confidence            99999999999999999999999999999999999999998888888888885431   122445568999999999999


Q ss_pred             cCCcCC
Q 013016          390 PCNRLG  395 (451)
Q Consensus       390 P~~Rpt  395 (451)
                      |+.||+
T Consensus       269 ~~~RP~  274 (375)
T KOG0591|consen  269 PEQRPD  274 (375)
T ss_pred             cccCCC
Confidence            999998

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.2e-48  Score=379.62  Aligned_cols=271  Identities=35%  Similarity=0.750  Sum_probs=223.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH-CCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM-LDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||.||+|.++.+++         .||||++.+..............|..++.. .+||||+++++++..++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~   71 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNE---------FFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHL   71 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEE
Confidence            369999999999999887665         499999987654444444555566777765 4899999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        72 ~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~  149 (316)
T cd05592          72 FFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG  149 (316)
T ss_pred             EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC
Confidence            9999999999999988764  45999999999999999999999999999999999999999999999999997421100


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                             .......+||+.|+|||++.+..++
T Consensus       150 -------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05592         150 -------------------------------------------------------EGKASTFCGTPDYIAPEILKGQKYN  174 (316)
T ss_pred             -------------------------------------------------------CCccccccCCccccCHHHHcCCCCC
Confidence                                                                   0111234799999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh-HHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA-ADV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~-~el  403 (451)
                      .++|||||||++|+|++|+.||.+.+..+.+..+......++..     .+.++.+||.+||+.||.+||+    + .++
T Consensus       175 ~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~ll~~~l~~~P~~R~~----~~~~l  245 (316)
T cd05592         175 ESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRW-----ISKEAKDCLSKLFERDPTKRLG----VDGDI  245 (316)
T ss_pred             CcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHccCCHHHcCC----ChHHH
Confidence            99999999999999999999999988888888777655444432     3448999999999999999998    5 488


Q ss_pred             HcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          404 KTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       404 l~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      ++||||.+++|...  +...++..|....+
T Consensus       246 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (316)
T cd05592         246 RQHPFFRGIDWERLEKREIPPPFKPKVKSP  275 (316)
T ss_pred             HcCcccCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            99999999998654  44555666665544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.9e-48  Score=381.23  Aligned_cols=275  Identities=38%  Similarity=0.693  Sum_probs=227.5

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHH-HHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK-ILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||||++.+...........+..|.. +++.++||||+++++++...+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~   71 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGK---------FYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKL   71 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEE
Confidence            369999999999999887665         49999998765444444444445544 56779999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-  148 (323)
T cd05575          72 YFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-  148 (323)
T ss_pred             EEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-
Confidence            9999999999999888764  5689999999999999999999999999999999999999999999999999742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (323)
T cd05575         149 ------------------------------------------------------HSKTTSTFCGTPEYLAPEVLRKQPYD  174 (323)
T ss_pred             ------------------------------------------------------CCCccccccCChhhcChhhhcCCCCC
Confidence                                                                  00011234799999999999998999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++|||||||++|+|++|+.||...+..+.+..+.......+...     +..+.+||.+||+.||.+||+.+..+.+++
T Consensus       175 ~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~li~~~l~~~p~~R~~~~~~~~~il  249 (323)
T cd05575         175 RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNI-----SVSARHLLEGLLQKDRTKRLGAKDDFLEIK  249 (323)
T ss_pred             ccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHHhhcCHHhCCCCCCCHHHHH
Confidence            999999999999999999999999888888888887765544322     348999999999999999999766678999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      +||||..++|..+  ....+|..|....+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd05575         250 NHVFFSSINWDDLVNKKITPPFNPNVSGP  278 (323)
T ss_pred             cCCCcCCCCHHHHhhccCCCCcCCCCCCc
Confidence            9999999988654  45566666766554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-49  Score=382.82  Aligned_cols=268  Identities=27%  Similarity=0.359  Sum_probs=220.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..+.|+.+++||+|+||.||+|++..+++         +||+|.++.... .........+||.||++|.||||++|.+.
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgk---------ivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~ei  184 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGK---------IVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEI  184 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCc---------EEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeE
Confidence            34569999999999999999999988776         699999986642 23445566789999999999999999998


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ..+.  +.+|||+|||+ -+|.-++.. +.-.|++.+++.+++||+.||+|+|.+||+|||||.+||||+.+|.+||+||
T Consensus       185 vt~~~~~siYlVFeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDF  262 (560)
T KOG0600|consen  185 VTSKLSGSIYLVFEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADF  262 (560)
T ss_pred             EEecCCceEEEEEeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccc
Confidence            8776  69999999994 477766654 3456999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|.+...                                       ..-..+               ...+-|.+|+||
T Consensus       263 GLAr~y~~---------------------------------------~~~~~~---------------T~rVvTLWYRpP  288 (560)
T KOG0600|consen  263 GLARFYTP---------------------------------------SGSAPY---------------TSRVVTLWYRPP  288 (560)
T ss_pred             cceeeccC---------------------------------------CCCccc---------------ccceEEeeccCh
Confidence            99853221                                       111111               123779999999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC-----------------------
Q 013016          316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS-----------------------  371 (451)
Q Consensus       316 E~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------  371 (451)
                      |+++|. .|+.++|+||+||||.||++|++.|.+..+.+.+..|..--..+....|+                       
T Consensus       289 ELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~  368 (560)
T KOG0600|consen  289 ELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRET  368 (560)
T ss_pred             HHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHH
Confidence            999995 49999999999999999999999999999999888887644333333332                       


Q ss_pred             -CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          372 -SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       372 -~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                       ...+..+.+|+..||+.||.+|.|    |.++|+++||...+.+
T Consensus       369 ~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~seyF~t~p~~  409 (560)
T KOG0600|consen  369 FKDFPASALDLLEKLLSLDPDKRGT----ASSALQSEYFTTEPLP  409 (560)
T ss_pred             hccCCHHHHHHHHHHhccCcccccc----HHHHhcCcccccCCCC
Confidence             011226789999999999999999    9999999999664443

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-48  Score=386.73  Aligned_cols=309  Identities=36%  Similarity=0.650  Sum_probs=242.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++.+...........+..|+.++..++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQ---------VYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ   71 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCC---------EEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee
Confidence            479999999999999999999887655         49999998776555455667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~  149 (350)
T cd05573          72 DEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCK  149 (350)
T ss_pred             cCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence            999999999999999999998875  569999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ..................         ....             ..    ..................||+.|+|||++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~---------~~~~-------------~~----~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (350)
T cd05573         150 KMNKAKDREYYLNDSHNL---------LFRD-------------NV----LVRRRDHKQRRVRANSTVGTPDYIAPEVLR  203 (350)
T ss_pred             cCcccCcccccccccccc---------cccc-------------cc----cccccccccccccccccccCccccCHHHHc
Confidence            443221000000000000         0000             00    000000000111222457999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc--CCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK--KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +..++.++|||||||++|+|++|+.||...........+..  ....++...  . .+.++.+||.+||. ||.+|++. 
T Consensus       204 ~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~--~-~~~~~~~li~~ll~-dp~~R~~s-  278 (350)
T cd05573         204 GTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDP--P-VSPEAIDLICRLLC-DPEDRLGS-  278 (350)
T ss_pred             CCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCC--C-CCHHHHHHHHHHcc-ChhhcCCC-
Confidence            99999999999999999999999999999887777777776  333333322  1 34489999999998 99999985 


Q ss_pred             CChHHHHcCCCcCCCCcccccccCCCCCCCCCCCC
Q 013016          398 RGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK  432 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~  432 (451)
                        +.++++||||++++|.......+|..|....+.
T Consensus       279 --~~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~  311 (350)
T cd05573         279 --FEEIKSHPFFKGIDWENLRETKPPFVPELSSPL  311 (350)
T ss_pred             --HHHHhcCCCcCCCCHHHHhhCCCCcCCCCCCch
Confidence              789999999999999888888888888877643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.5e-48  Score=386.12  Aligned_cols=285  Identities=33%  Similarity=0.565  Sum_probs=233.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|++.++||+|+||.||+|.++.+++         .||+|++.+...........+..|+.+++.++||||++++
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~  109 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQ---------VYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLH  109 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEE
Confidence            3455789999999999999999999887665         4999999876544444455677799999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+++++|+||||++||+|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~Df  186 (370)
T cd05596         110 YAFQDDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF  186 (370)
T ss_pred             EEEecCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEec
Confidence            9999999999999999999999988653   4889999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                      ........+||+.|+||
T Consensus       187 G~~~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aP  212 (370)
T cd05596         187 GTCMKMDAN------------------------------------------------------GMVRCDTAVGTPDYISP  212 (370)
T ss_pred             cceeeccCC------------------------------------------------------CcccCCCCCCCcCeECH
Confidence            997432100                                                      00011134799999999


Q ss_pred             ccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          316 EVASGG----SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       316 E~~~~~----~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |++.+.    .++.++|||||||++|||++|+.||...+....+..+............. ..+.++++||.+||+.+|.
T Consensus       213 E~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~s~~~~~li~~~L~~~p~  291 (370)
T cd05596         213 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDI-EISKQAKDLICAFLTDREV  291 (370)
T ss_pred             HHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcC-CCCHHHHHHHHHHccChhh
Confidence            998753    37889999999999999999999999988888888887654322211111 2344899999999999998


Q ss_pred             C--cCCCCCChHHHHcCCCcCCCCcc--cccccCCCCCCCCCCC
Q 013016          392 N--RLGSKRGAADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       392 ~--Rpt~~~~~~ell~hp~~~~~~~~--~~~~~~~~~~p~~~~~  431 (451)
                      +  |++    ++|+++||||++.+|.  ..+...+|.+|...+.
T Consensus       292 r~~R~s----~~ell~h~~~~~~~~~~~~~~~~~~~~~p~~~~~  331 (370)
T cd05596         292 RLGRNG----VDEIKSHPFFKNDQWTFDNIRETVAPVVPELSSD  331 (370)
T ss_pred             ccCCCC----HHHHhcCcccCCCChhhHHhcCCCcCccCcCCCc
Confidence            8  999    9999999999998775  3456666777765543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.3e-48  Score=378.32  Aligned_cols=271  Identities=36%  Similarity=0.715  Sum_probs=223.5

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||.||+|.++.+++         .||+|++.+..............|..++... +|+||+++++++.+.+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~   71 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGE---------YFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHL   71 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEE
Confidence            469999999999999887665         4999999876543333445556677777754 899999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||+.||+|..++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..... 
T Consensus        72 ~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~-  148 (316)
T cd05620          72 FFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF-  148 (316)
T ss_pred             EEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc-
Confidence            9999999999999888764  5589999999999999999999999999999999999999999999999998731100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05620         149 ------------------------------------------------------GDNRASTFCGTPDYIAPEILQGLKYT  174 (316)
T ss_pred             ------------------------------------------------------CCCceeccCCCcCccCHHHHcCCCCC
Confidence                                                                  00011234799999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh-HHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA-ADV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~-~el  403 (451)
                      .++|||||||++|+|++|+.||...+..+.+..+......++..     .+.++.+||.+||+.||++|++    + +++
T Consensus       175 ~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~dP~~R~~----~~~~~  245 (316)
T cd05620         175 FSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRW-----ITKESKDILEKLFERDPTRRLG----VVGNI  245 (316)
T ss_pred             cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHccCCHHHcCC----ChHHH
Confidence            99999999999999999999999888877777776655444432     3448999999999999999999    7 589


Q ss_pred             HcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          404 KTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       404 l~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      ++||||+.++|...  ....+|..|....+
T Consensus       246 ~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~  275 (316)
T cd05620         246 RGHPFFKTINWTALEKRELDPPFKPKVKSP  275 (316)
T ss_pred             HcCCCcCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            99999999998753  45556666666554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-48  Score=383.15  Aligned_cols=264  Identities=36%  Similarity=0.604  Sum_probs=239.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ..|++.+.||.|.||.||+|..+.+++.         +|+|++.+...........+.+|+.+|+++. |||||.++++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~---------~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~  105 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKE---------VACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF  105 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCce---------eEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            5699999999999999999999987664         9999999987766666678888999999998 99999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC----CCEEEec
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD----GHIMLSD  234 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~----~~~kl~D  234 (451)
                      ++...+++|||+|.||.|.+.+...   .+++..+..++.||+.|++|||+.||+||||||+|+|+...    +.+|++|
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~D  182 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLID  182 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEee
Confidence            9999999999999999999988776   29999999999999999999999999999999999999743    4799999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++.....                                                        ..+...++||+.|+|
T Consensus       183 FGla~~~~~--------------------------------------------------------~~~~~~~~Gtp~y~A  206 (382)
T KOG0032|consen  183 FGLAKFIKP--------------------------------------------------------GERLHTIVGTPEYVA  206 (382)
T ss_pred             CCCceEccC--------------------------------------------------------CceEeeecCCccccC
Confidence            999853321                                                        122335699999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++.+..|+..+||||+|+++|.|++|..||.+......+.++..+...+....++.+.. .+++||++||..||.+|+
T Consensus       207 PEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~-~akd~i~~ll~~dp~~R~  285 (382)
T KOG0032|consen  207 PEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE-SAKDFIRKLLEFDPRKRL  285 (382)
T ss_pred             chhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH-HHHHHHHHhcccCcccCC
Confidence            9999989999999999999999999999999999999999999999999999999988866 999999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCCccc
Q 013016          395 GSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~  416 (451)
                      |    +.++|+|||+++.....
T Consensus       286 t----a~~~L~HpWi~~~~~~~  303 (382)
T KOG0032|consen  286 T----AAQALQHPWIKSIGEAT  303 (382)
T ss_pred             C----HHHHhcCccccCCcccc
Confidence            9    99999999999865554

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=4.2e-48  Score=378.01  Aligned_cols=270  Identities=36%  Similarity=0.721  Sum_probs=227.3

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||||++.+...........+..|..+++.+ +|+||+++++++...+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~   71 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDE---------LYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRL   71 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEE
Confidence            369999999999999887655         4999999987655555566677788898887 699999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|..++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-  148 (318)
T cd05570          72 FFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL-  148 (318)
T ss_pred             EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc-
Confidence            9999999999999888764  4699999999999999999999999999999999999999999999999998742100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+|++.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~  174 (318)
T cd05570         149 ------------------------------------------------------GGVTTSTFCGTPDYIAPEILSYQPYG  174 (318)
T ss_pred             ------------------------------------------------------CCCcccceecCccccCHHHhcCCCCC
Confidence                                                                  00011134789999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh----
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA----  400 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~----  400 (451)
                      .++|||||||++|+|++|+.||...+.......+......++..     .+..+.+||.+||..||.+||+    +    
T Consensus       175 ~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~~l~~dP~~R~s----~~~~~  245 (318)
T cd05570         175 PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRW-----LSKEAKSILKSFLTKNPEKRLG----CLPTG  245 (318)
T ss_pred             cchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCc-----CCHHHHHHHHHHccCCHHHcCC----CCCCC
Confidence            99999999999999999999999888888888887766555432     3348999999999999999999    7    


Q ss_pred             -HHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          401 -ADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       401 -~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                       .+++.||||+.++|...  ....+|..|....
T Consensus       246 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (318)
T cd05570         246 EQDIKGHPFFREIDWDKLERKEIKPPFKPKIKG  278 (318)
T ss_pred             HHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence             99999999999988643  4555666666654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.1e-48  Score=386.66  Aligned_cols=306  Identities=31%  Similarity=0.557  Sum_probs=231.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+..|+.++..++|+||+++++.+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   71 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGH---------IYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ   71 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            469999999999999999999887665         49999998765555556677888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+++|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~  149 (360)
T cd05627          72 DKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT  149 (360)
T ss_pred             cCCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence            999999999999999999998764  458999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCc--ccccccccccccccccCCCccCccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR--LFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      .............              ........+.        ........  ..............+||+.|+|||+
T Consensus       150 ~~~~~~~~~~~~~--------------~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  207 (360)
T cd05627         150 GLKKAHRTEFYRN--------------LTHNPPSDFS--------FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEV  207 (360)
T ss_pred             ccccccccccccc--------------cccCCccccc--------ccccccccccccccccccccccccCCCccccCHHH
Confidence            4321110000000              0000000000        00000000  0000011122234689999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--CCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL--TFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++|||||||++|||++|+.||........+..+.....  .++..   ...+.++++||.+|+ .||.+|++
T Consensus       208 ~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~-~~p~~R~~  283 (360)
T cd05627         208 FMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE---VPISEKAKDLILRFC-TDSENRIG  283 (360)
T ss_pred             HcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC---CCCCHHHHHHHHHhc-cChhhcCC
Confidence            9999999999999999999999999999998888888777775432  22221   113348999999987 49999996


Q ss_pred             CCCChHHHHcCCCcCCCCcccccccCCC
Q 013016          396 SKRGAADVKTHPFFKGLNFALIRSLTPP  423 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~~~~~~~~  423 (451)
                      .. .+.|+++||||++++|........+
T Consensus       284 ~~-~~~ei~~hp~f~~~~~~~~~~~~~~  310 (360)
T cd05627         284 SN-GVEEIKSHPFFEGVDWGHIRERPAA  310 (360)
T ss_pred             CC-CHHHHhcCCCCCCCCHHHHhcCCCC
Confidence            21 2899999999999999877554433

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=4.1e-48  Score=385.45  Aligned_cols=284  Identities=32%  Similarity=0.590  Sum_probs=231.2

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ...++|++.++||+|+||.||+|.++.+++         .||+|++.+...........+..|+.+++.++||||+++++
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~  110 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQK---------VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC  110 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            344789999999999999999999987665         49999998755444444556778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++.+++++|+||||++||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG  187 (370)
T cd05621         111 AFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG  187 (370)
T ss_pred             EEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecc
Confidence            999999999999999999999988653   48999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                      ......+.+||+.|||||
T Consensus       188 ~a~~~~~~------------------------------------------------------~~~~~~~~~gt~~Y~aPE  213 (370)
T cd05621         188 TCMKMDET------------------------------------------------------GMVRCDTAVGTPDYISPE  213 (370)
T ss_pred             cceecccC------------------------------------------------------CceecccCCCCcccCCHH
Confidence            98532110                                                      000112347999999999


Q ss_pred             cccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          317 VASGGS----HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       317 ~~~~~~----~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      ++.+..    ++.++|||||||++|+|++|+.||...+....+..+......+..... ...+..+++++.+||..++.+
T Consensus       214 ~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~~L~~~~~r  292 (370)
T cd05621         214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED-VEISKHAKNLICAFLTDREVR  292 (370)
T ss_pred             HHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCc-ccCCHHHHHHHHHHccCchhc
Confidence            997643    788999999999999999999999998888888888765432222111 123448999999999865544


Q ss_pred             --cCCCCCChHHHHcCCCcCCCCc--ccccccCCCCCCCCCCC
Q 013016          393 --RLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       393 --Rpt~~~~~~ell~hp~~~~~~~--~~~~~~~~~~~p~~~~~  431 (451)
                        |++    +.|+++||||++..|  ...+...+|.+|.....
T Consensus       293 ~~R~~----~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~~~~  331 (370)
T cd05621         293 LGRNG----VEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSD  331 (370)
T ss_pred             cCCCC----HHHHhcCcccCCCCcChHhcCCCCCCcCCCCCCc
Confidence              889    999999999998655  34566777888877654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.7e-48  Score=379.24  Aligned_cols=278  Identities=34%  Similarity=0.664  Sum_probs=231.7

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFE  159 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~  159 (451)
                      +|.+.+.||+|+||.||+|.++.+++         .||||++.+..............|..++..+ +|++|+.+++++.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDE---------LYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ   71 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe
Confidence            58899999999999999999887665         4999999877554444555566678888777 5899999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+|+||||++||+|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~  149 (323)
T cd05616          72 TMDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCce
Confidence            999999999999999999888764  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       ........+||+.|+|||++.
T Consensus       150 ~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05616         150 ENMW-------------------------------------------------------DGVTTKTFCGTPDYIAPEIIA  174 (323)
T ss_pred             ecCC-------------------------------------------------------CCCccccCCCChhhcCHHHhc
Confidence            2110                                                       000112347999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC-C
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-R  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~-~  398 (451)
                      +..++.++|||||||++|+|++|+.||........+..+......++..     .+.++.+|+.+||+.||.+|++.. .
T Consensus       175 ~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~~l~~~p~~R~~~~~~  249 (323)
T cd05616         175 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-----MSKEAVAICKGLMTKHPGKRLGCGPE  249 (323)
T ss_pred             CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc-----CCHHHHHHHHHHcccCHHhcCCCCCC
Confidence            9999999999999999999999999999988888888888876665543     233899999999999999999842 2


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      ...++++||||+.++|...  +...+|..|..+
T Consensus       250 ~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~  282 (323)
T cd05616         250 GERDIKEHAFFRYIDWEKLERKEVQPPYKPKAC  282 (323)
T ss_pred             CHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCC
Confidence            3589999999999999754  445555555543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-49  Score=372.77  Aligned_cols=255  Identities=29%  Similarity=0.512  Sum_probs=231.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|++.+.||.|.||+|-+|+.+..++         .||||.|++....+.+..-.+.+|++||..|+||||+.+|++|+
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR---------~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE  123 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGR---------EVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE  123 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCc---------EeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc
Confidence            569999999999999999999877766         49999999999888888888999999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+.|||||..+|.|++|+...  +.+++..++++++||+.|+.|+|.++++|||||.+|||++.++++||+|||++.
T Consensus       124 NkdKIvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSN  201 (668)
T KOG0611|consen  124 NKDKIVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSN  201 (668)
T ss_pred             CCceEEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhh
Confidence            999999999999999999999886  669999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                       ++                 .-.+|||++.|.+||++.
T Consensus       202 ly~~---------------------------------------~k-----------------fLqTFCGSPLYASPEIvN  225 (668)
T KOG0611|consen  202 LYAD---------------------------------------KK-----------------FLQTFCGSPLYASPEIVN  225 (668)
T ss_pred             hhcc---------------------------------------cc-----------------HHHHhcCCcccCCccccC
Confidence            3221                                       11                 112579999999999999


Q ss_pred             CCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      |.+| +..+|-||||++||-|+.|..||.+.+...++++|.++....|....      ++.-||+.||-+||++|.|   
T Consensus       226 G~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PS------dA~gLIRwmLmVNP~RRAT---  296 (668)
T KOG0611|consen  226 GTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPS------DASGLIRWMLMVNPERRAT---  296 (668)
T ss_pred             CCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCc------hHHHHHHHHHhcCcccchh---
Confidence            9998 78999999999999999999999999999999999998776665432      7889999999999999999   


Q ss_pred             ChHHHHcCCCcCC
Q 013016          399 GAADVKTHPFFKG  411 (451)
Q Consensus       399 ~~~ell~hp~~~~  411 (451)
                       +.+|..|-|++=
T Consensus       297 -ieDiAsHWWvNw  308 (668)
T KOG0611|consen  297 -IEDIASHWWVNW  308 (668)
T ss_pred             -HHHHhhhheeec
Confidence             999999988754

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2e-48  Score=379.71  Aligned_cols=252  Identities=27%  Similarity=0.432  Sum_probs=212.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+..+.+.||.|+||+||+|.+++...          ||+|++......... ...+.+|+.+|.+++|||||.++|++.
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~----------vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~  109 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDV----------VAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACT  109 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCcee----------EEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            456667779999999999999988753          999999877554444 678899999999999999999999999


Q ss_pred             eCC-eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCcEEEccCC-CEEEeccC
Q 013016          160 ASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG-IIYRDLKPENVLVRSDG-HIMLSDFD  236 (451)
Q Consensus       160 ~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivH~Dlkp~NIll~~~~-~~kl~Dfg  236 (451)
                      ++. .++|||||+++|+|.++++......+++..+..|+.||+.||.|||+++ ||||||||+|||++.++ ++||+|||
T Consensus       110 ~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFG  189 (362)
T KOG0192|consen  110 SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFG  189 (362)
T ss_pred             CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCc
Confidence            887 7999999999999999998855577999999999999999999999999 99999999999999998 99999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++......                                                       .......||+.|||||
T Consensus       190 lsr~~~~~~-------------------------------------------------------~~~~~~~GT~~wMAPE  214 (362)
T KOG0192|consen  190 LSREKVISK-------------------------------------------------------TSMTSVAGTYRWMAPE  214 (362)
T ss_pred             cceeecccc-------------------------------------------------------ccccCCCCCccccChh
Confidence            985432110                                                       0111247999999999


Q ss_pred             ccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          317 VAS--GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       317 ~~~--~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ++.  ...|+.++||||||++||||+||+.||...........+.......+....   .+..+..|+.+||..||..||
T Consensus       215 v~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~---~~~~l~~l~~~CW~~dp~~RP  291 (362)
T KOG0192|consen  215 VLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKE---CPPHLSSLMERCWLVDPSRRP  291 (362)
T ss_pred             hhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCcc---CCHHHHHHHHHhCCCCCCcCC
Confidence            999  568999999999999999999999999998887766666644433322211   344899999999999999999


Q ss_pred             CCCCChHHHH
Q 013016          395 GSKRGAADVK  404 (451)
Q Consensus       395 t~~~~~~ell  404 (451)
                      +    +.+++
T Consensus       292 ~----f~ei~  297 (362)
T KOG0192|consen  292 S----FLEIV  297 (362)
T ss_pred             C----HHHHH
Confidence            9    66665

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=6.2e-48  Score=376.38  Aligned_cols=272  Identities=35%  Similarity=0.744  Sum_probs=225.4

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH-CCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM-LDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||||++.+..............|..++.. ++||||+++++++.+.+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~   71 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQ---------FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENL   71 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEE
Confidence            469999999999999887665         499999987654333444555667777776 4899999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~-  148 (316)
T cd05619          72 FFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML-  148 (316)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC-
Confidence            9999999999999988764  4589999999999999999999999999999999999999999999999999742100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            .........||..|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05619         149 ------------------------------------------------------GDAKTCTFCGTPDYIAPEILLGQKYN  174 (316)
T ss_pred             ------------------------------------------------------CCCceeeecCCccccCHHHHcCCCCC
Confidence                                                                  00011234789999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChH-HH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-DV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~-el  403 (451)
                      .++|||||||++|+|++|+.||......+.+..+......++.     ..+.++.+||.+||+.||.+|++    +. ++
T Consensus       175 ~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~li~~~l~~~P~~R~~----~~~~l  245 (316)
T cd05619         175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR-----WLTREAKDILVKLFVREPERRLG----VKGDI  245 (316)
T ss_pred             chhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc-----cCCHHHHHHHHHHhccCHhhcCC----ChHHH
Confidence            9999999999999999999999988877777777655444332     23348999999999999999999    75 89


Q ss_pred             HcCCCcCCCCcccc--cccCCCCCCCCCCCC
Q 013016          404 KTHPFFKGLNFALI--RSLTPPEIPGMRRQK  432 (451)
Q Consensus       404 l~hp~~~~~~~~~~--~~~~~~~~p~~~~~~  432 (451)
                      +.||||++++|...  +...+|..|....+.
T Consensus       246 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (316)
T cd05619         246 RQHPFFREIDWSALEEREIEPPFKPKVKSAN  276 (316)
T ss_pred             HcCcccCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            99999999999754  556677777776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.5e-48  Score=378.42  Aligned_cols=274  Identities=37%  Similarity=0.732  Sum_probs=221.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||.||+|.++.+++         .||||++.+...........+..|..++..+ +||||+++++++...+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~   71 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRR---------IYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRL   71 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEE
Confidence            369999999999999887765         4999999877655555566677899999888 799999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-  148 (329)
T cd05588          72 FFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-  148 (329)
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc-
Confidence            9999999999999888654  5699999999999999999999999999999999999999999999999999742100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            .......++||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588         149 ------------------------------------------------------PGDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             ------------------------------------------------------CCCccccccCCccccCHHHHcCCCCC
Confidence                                                                  00111235799999999999998999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPS---------NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      .++|||||||++|+|++|+.||....         .......+.......|..     .+.++.++|++||+.||.+|++
T Consensus       175 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~  249 (329)
T cd05588         175 FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS-----LSVKASSVLKGFLNKDPKERLG  249 (329)
T ss_pred             CccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhccCHHHcCC
Confidence            99999999999999999999996311         122344455554444432     2338999999999999999997


Q ss_pred             CC--CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          396 SK--RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       396 ~~--~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ..  ..++++++||||..++|...  ....+|..|....
T Consensus       250 ~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~~  288 (329)
T cd05588         250 CHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIES  288 (329)
T ss_pred             CCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccCCC
Confidence            32  23789999999999998754  3344455555544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.2e-47  Score=375.50  Aligned_cols=280  Identities=34%  Similarity=0.673  Sum_probs=233.3

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFE  159 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~  159 (451)
                      +|++.+.||+|+||+||+|.++.+++         .||+|++.+...........+..|..++..+. |++|+++++++.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDE---------LYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ   71 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe
Confidence            47889999999999999999887665         49999998765544455566777888888885 577888999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~  149 (323)
T cd05615          72 TVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccc
Confidence            999999999999999999988764  459999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       150 ~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05615         150 EHMVD-------------------------------------------------------GVTTRTFCGTPDYIAPEIIA  174 (323)
T ss_pred             ccCCC-------------------------------------------------------CccccCccCCccccCHHHHc
Confidence            21100                                                       00111346899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC-C
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-R  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~-~  398 (451)
                      +..++.++|||||||++|+|++|+.||...........+......++...     +.++.+++.+||+.||.+|++.. .
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~-----~~~~~~li~~~l~~~p~~R~~~~~~  249 (323)
T cd05615         175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL-----SKEAVSICKGLMTKHPSKRLGCGPE  249 (323)
T ss_pred             CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccC-----CHHHHHHHHHHcccCHhhCCCCCCC
Confidence            98899999999999999999999999999888888888887766555432     33899999999999999999842 2


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      ...++++||||++++|...  +...+|..|..+..
T Consensus       250 ~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T cd05615         250 GERDIREHAFFRRIDWDKLENREIQPPFKPKVCGK  284 (323)
T ss_pred             CHHHHhcCcccCCCCHHHHhcCCCCcCccCccCCC
Confidence            3679999999999999755  44566777765553

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-47  Score=375.96  Aligned_cols=284  Identities=36%  Similarity=0.598  Sum_probs=230.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||+|++.+...........+..|+.++..++|+||+.+++++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQ---------VYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ   71 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCC---------EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe
Confidence            479999999999999999999887665         49999998755444555566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|+||||++||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~  150 (331)
T cd05597          72 DENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCL  150 (331)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCcee
Confidence            999999999999999999998764 3458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                      ........+||+.|+|||++.
T Consensus       151 ~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         151 RLLAD------------------------------------------------------GTVQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             ecCCC------------------------------------------------------CCccccceeccccccCHHHHh
Confidence            32110                                                      000011236899999999986


Q ss_pred             C-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC--
Q 013016          320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN--  392 (451)
Q Consensus       320 ~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~--  392 (451)
                      +     ..++.++|||||||++|+|++|+.||......+.+..+......+.........+..+++||++||..++.+  
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~  256 (331)
T cd05597         177 AMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLG  256 (331)
T ss_pred             hccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccC
Confidence            3     347889999999999999999999999887777777776544322221111224448999999999765443  


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      |++    ++++++||||.+++|.......+|.+|...+.
T Consensus       257 r~~----~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~  291 (331)
T cd05597         257 RNG----LQDFKDHPFFEGIDWDNIRNSTAPYVPEVSSP  291 (331)
T ss_pred             CCC----HHHHhcCCCCCCCCHHHHhhCCCCccCcCCCc
Confidence            778    99999999999999988877777777766553

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=6.7e-48  Score=378.26  Aligned_cols=276  Identities=37%  Similarity=0.711  Sum_probs=221.0

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||+|++.+...........+..|+.++.++ +||||+++++++...+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~   71 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTER---------IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   71 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEE
Confidence            469999999999999887765         4999999877554445556677788888776 799999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||+++++|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        72 ~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~  149 (329)
T cd05618          72 FFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  149 (329)
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC
Confidence            9999999999998887664  45999999999999999999999999999999999999999999999999997421100


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                             ......++||+.|+|||++.+..++
T Consensus       150 -------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05618         150 -------------------------------------------------------GDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             -------------------------------------------------------CCccccccCCccccCHHHHcCCCCC
Confidence                                                                   0011234799999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAP---------SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      .++|||||||++|+|++|+.||...         ........+......+|..     .+..+.+||.+||+.||.+|++
T Consensus       175 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~ll~~~L~~dP~~R~~  249 (329)
T cd05618         175 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLG  249 (329)
T ss_pred             CccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHhcCCHHHcCC
Confidence            9999999999999999999999521         1122334444554444432     2338999999999999999998


Q ss_pred             CC--CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCC
Q 013016          396 SK--RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK  432 (451)
Q Consensus       396 ~~--~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~  432 (451)
                      ..  ..+.++++||||++++|...  +...+|..|...+..
T Consensus       250 ~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  290 (329)
T cd05618         250 CHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEF  290 (329)
T ss_pred             CCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCCCcc
Confidence            32  22579999999999998644  445566666655443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-47  Score=372.68  Aligned_cols=312  Identities=53%  Similarity=0.906  Sum_probs=248.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|++|.||+|.+..+++         .||+|.+.............+..|+++++.++|+||+++++.+.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   71 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGK---------LFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ   71 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCc---------EEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee
Confidence            369999999999999999999887554         49999998765444445667888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+.|++|.+++.......+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  151 (316)
T cd05574          72 TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSK  151 (316)
T ss_pred             cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhh
Confidence            99999999999999999999987666779999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ...............         .+....  .         .+.      ......+........+.|+..|+|||++.
T Consensus       152 ~~~~~~~~~~~~~~~---------~~~~~~--~---------~~~------~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  205 (316)
T cd05574         152 QSDVEPPPVSKALRK---------GSRRSS--V---------NSI------PSETFSEEPSFRSNSFVGTEEYIAPEVIS  205 (316)
T ss_pred             ccccccccccccccc---------cccccc--c---------ccc------chhhhcccccCCCCCCcCccCCcCHHHHc
Confidence            432211100000000         000000  0         000      00001111122233568999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|+|++|+.||........+.++......++....   .+..+.+||.+||..||++||+.+..
T Consensus       206 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~R~s~~~~  282 (316)
T cd05574         206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPP---VSSSARDLIRKLLVKDPSKRLGSKRG  282 (316)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccc---cCHHHHHHHHHHccCCHhHCCCchhh
Confidence            988999999999999999999999999988888888777766555443221   34589999999999999999999888


Q ss_pred             hHHHHcCCCcCCCCcccccccCCCCCCCCC
Q 013016          400 AADVKTHPFFKGLNFALIRSLTPPEIPGMR  429 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~~~~~~~~~~~p~~~  429 (451)
                      ++|+|.||||++.+|+..+...+|.+|.+-
T Consensus       283 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  312 (316)
T cd05574         283 AAEIKQHPFFRGVNWALIRHTTPPIIPRPD  312 (316)
T ss_pred             HHHHHcCchhhcCChhhcccCCCCCCCCcc
Confidence            999999999999999999999888887653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.4e-47  Score=376.49  Aligned_cols=284  Identities=35%  Similarity=0.588  Sum_probs=233.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.++.+.+         .||+|++.+...........+..|+.++..++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADK---------VFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ   71 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCC---------EEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence            479999999999999999999887665         49999998755444455556778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+++|+||||++||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~  150 (332)
T cd05623          72 DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCL  150 (332)
T ss_pred             cCCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchhe
Confidence            9999999999999999999997642 458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                      ........+||+.|+|||++.
T Consensus       151 ~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         151 KLMED------------------------------------------------------GTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             ecccC------------------------------------------------------CcceecccccCccccCHHHHh
Confidence            22100                                                      000111247999999999986


Q ss_pred             C-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC--
Q 013016          320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN--  392 (451)
Q Consensus       320 ~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~--  392 (451)
                      +     ..++.++|||||||++|||++|+.||...+..+.+..+.......+........+.++++||++||..++.+  
T Consensus       177 ~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~  256 (332)
T cd05623         177 AMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLG  256 (332)
T ss_pred             ccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcC
Confidence            3     457889999999999999999999999988888888887654333221111223448999999999765554  


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      |++    +.|+++||||++++|...+....|.+|...++
T Consensus       257 r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~  291 (332)
T cd05623         257 QNG----IEDFKQHPFFTGIDWDNIRNCEAPYIPEVSSP  291 (332)
T ss_pred             CCC----HHHHhCCCCcCCCCHHHHhhCCCCccCCCCCC
Confidence            678    99999999999999998888888888876654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-47  Score=369.01  Aligned_cols=268  Identities=34%  Similarity=0.553  Sum_probs=218.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|++.++||+|+||+||+|.+..+.+         .||+|++.............+.+|+.+++.++|+||+++++++..
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   71 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET   71 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCc---------eEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC
Confidence            48899999999999999999876654         499999986654444444556679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+++|+||||+++|+|.+++.......+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++..
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05605          72 KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVE  151 (285)
T ss_pred             CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence            99999999999999999888765556699999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                        ......+|+..|+|||++.+
T Consensus       152 ~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         152 IPEG--------------------------------------------------------ETIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             cCCC--------------------------------------------------------CccccccCCCCccCcHHhcC
Confidence            2100                                                        00012368899999999998


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC-----C
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-----G  395 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp-----t  395 (451)
                      ..++.++|||||||++|+|++|+.||.+.........+.......+.... ...+..+.+||.+||..||++||     +
T Consensus       176 ~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~  254 (285)
T cd05605         176 ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYS-EKFSEAARSICRQLLTKDPGFRLGCRGEG  254 (285)
T ss_pred             CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccC-cccCHHHHHHHHHHccCCHHHhcCCCCCC
Confidence            88999999999999999999999999876554333332221111111111 12344899999999999999999     7


Q ss_pred             CCCChHHHHcCCCcCCCCccccc
Q 013016          396 SKRGAADVKTHPFFKGLNFALIR  418 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~~~  418 (451)
                          ++++++||||...+|+...
T Consensus       255 ----~~~l~~~~~~~~~~~~~~~  273 (285)
T cd05605         255 ----AEEVKAHPFFRTANFKRLE  273 (285)
T ss_pred             ----HHHHhcCcCccCCCHHHHh
Confidence                9999999999999998663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=9.6e-48  Score=368.62  Aligned_cols=261  Identities=34%  Similarity=0.598  Sum_probs=212.0

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||+|+||+||+|.++.+++         .||+|++.+...........+..|+.+++.++|+||+++++++...++.|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   71 (280)
T cd05608           1 LGKGGFGEVSACQMRATGK---------LYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLV   71 (280)
T ss_pred             CCCCCceeEEEEEEccCCc---------EEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEE
Confidence            6999999999999887665         4999999876555444556677899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          168 MEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      |||++||+|.+++...  ....+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++...... 
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-  150 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG-  150 (280)
T ss_pred             EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC-
Confidence            9999999998877542  2356899999999999999999999999999999999999999999999999997432110 


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                                                                            ........||+.|+|||++.+..++.
T Consensus       151 ------------------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~  176 (280)
T cd05608         151 ------------------------------------------------------QSKTKGYAGTPGFMAPELLQGEEYDF  176 (280)
T ss_pred             ------------------------------------------------------CccccccCCCcCccCHHHhcCCCCCc
Confidence                                                                  00011246899999999999999999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC-Ch
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GA  400 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~-~~  400 (451)
                      ++|||||||++|+|++|+.||......    .....+......++.     ..+.++.+++.+||+.||++||+.+. .+
T Consensus       177 ~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~~P~~R~~~~~~~~  251 (280)
T cd05608         177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPD-----KFSPASKSFCEALLAKDPEKRLGFRDGNC  251 (280)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcc-----cCCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence            999999999999999999999865432    223333333222222     23448999999999999999994311 28


Q ss_pred             HHHHcCCCcCCCCcccc
Q 013016          401 ADVKTHPFFKGLNFALI  417 (451)
Q Consensus       401 ~ell~hp~~~~~~~~~~  417 (451)
                      +++++||||++++|..+
T Consensus       252 ~~~l~h~~~~~~~~~~~  268 (280)
T cd05608         252 DGLRTHPLFRDLNWRQL  268 (280)
T ss_pred             HHHhcChhhhcCCHhHH
Confidence            99999999999988755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=9e-48  Score=376.80  Aligned_cols=274  Identities=36%  Similarity=0.679  Sum_probs=225.2

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHH-HHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK-ILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||+|++.+...........+..|.. +++.++||||+++++++...+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~   71 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGK---------CYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKL   71 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEE
Confidence            369999999999999877655         49999998765444444445555554 46778999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|..++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus        72 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~-  148 (325)
T cd05604          72 YFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA-  148 (325)
T ss_pred             EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC-
Confidence            9999999999999887654  5699999999999999999999999999999999999999999999999999742100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05604         149 ------------------------------------------------------QSDTTTTFCGTPEYLAPEVIRKQPYD  174 (325)
T ss_pred             ------------------------------------------------------CCCCcccccCChhhCCHHHHcCCCCC
Confidence                                                                  00011234799999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++|||||||++|+|++|+.||......+.+..+.......+..     .+..+.++|.+||+.||.+||+.+..+.+++
T Consensus       175 ~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~  249 (325)
T cd05604         175 NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPG-----ASLTAWSILEELLEKDRQRRLGAKEDFLEIQ  249 (325)
T ss_pred             CcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCC-----CCHHHHHHHHHHhccCHHhcCCCCCCHHHHh
Confidence            99999999999999999999999888888888887765544322     2338899999999999999999777788999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      +||||..++|...  ....+|..|....
T Consensus       250 ~h~~f~~~~~~~~~~~~~~~~~~~~~~~  277 (325)
T cd05604         250 EHPFFESLSWTDLEQKKIPPPFNPNVEG  277 (325)
T ss_pred             cCCCcCCCCHHHHHhCCCCCCcCCcCCC
Confidence            9999999888654  3445566665544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.7e-47  Score=379.77  Aligned_cols=284  Identities=32%  Similarity=0.576  Sum_probs=230.2

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ...++|++.+.||+|+||.||+|.++.+.+         .||+|++.+...........+..|+.+++.++||||+++++
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~---------~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~  110 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---------VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY  110 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCc---------EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            344789999999999999999999987765         49999998755444445556778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++..++++|+||||++||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG  187 (371)
T cd05622         111 AFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG  187 (371)
T ss_pred             EEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence            999999999999999999999988653   48999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                      ........+||+.|||||
T Consensus       188 ~a~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE  213 (371)
T cd05622         188 TCMKMNKE------------------------------------------------------GMVRCDTAVGTPDYISPE  213 (371)
T ss_pred             ceeEcCcC------------------------------------------------------CcccccCcccCccccCHH
Confidence            98432110                                                      000112347999999999


Q ss_pred             cccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          317 VASGGS----HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       317 ~~~~~~----~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      ++.+..    ++.++|||||||++|+|++|+.||...+....+..+......+....... .+..+++||.+||..++.+
T Consensus       214 ~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~~L~~~~~r  292 (371)
T cd05622         214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND-ISKEAKNLICAFLTDREVR  292 (371)
T ss_pred             HHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCC-CCHHHHHHHHHHcCChhhh
Confidence            987643    78899999999999999999999999888888888876543322222222 3448999999999844433


Q ss_pred             --cCCCCCChHHHHcCCCcCCCCc--ccccccCCCCCCCCCCC
Q 013016          393 --RLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       393 --Rpt~~~~~~ell~hp~~~~~~~--~~~~~~~~~~~p~~~~~  431 (451)
                        |++    ++|+++|+||++..+  ...+...+|.+|...+.
T Consensus       293 ~~r~~----~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (371)
T cd05622         293 LGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSD  331 (371)
T ss_pred             cCCCC----HHHHhcCcccCCCChhHHhcCCCCCCCCCCCCCc
Confidence              678    999999999999655  45567777777765543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.2e-47  Score=373.78  Aligned_cols=276  Identities=36%  Similarity=0.682  Sum_probs=222.6

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      ++||+|+||.||+|.+....      ..+..||||++.+..... ......+..|+.+++.++||||+++++++..++.+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~   75 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGA------DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKL   75 (323)
T ss_pred             ceeeecCCeEEEEEEEcccC------CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeE
Confidence            57999999999999865321      123359999998754322 23345567799999999999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|.+++...  +.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus        76 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-  152 (323)
T cd05584          76 YLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH-  152 (323)
T ss_pred             EEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc-
Confidence            9999999999999988764  4588999999999999999999999999999999999999999999999999742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+||+.|+|||++.+..++
T Consensus       153 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  178 (323)
T cd05584         153 ------------------------------------------------------EGTVTHTFCGTIEYMAPEILMRSGHG  178 (323)
T ss_pred             ------------------------------------------------------CCCcccccCCCccccChhhccCCCCC
Confidence                                                                  00011134799999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~el  403 (451)
                      .++|||||||++|||++|+.||........+..+..+....+...     +.++.+||.+||+.||++||+. ...++++
T Consensus       179 ~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~~l~~~p~~R~~~~~~~~~~l  253 (323)
T cd05584         179 KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYL-----TPEARDLLKKLLKRNPSSRLGAGPGDAAEV  253 (323)
T ss_pred             CcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHHcccCHhHcCCCCCCCHHHH
Confidence            999999999999999999999999888888888887766554432     3389999999999999999921 1119999


Q ss_pred             HcCCCcCCCCcccc--cccCCCCCCCCC
Q 013016          404 KTHPFFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       404 l~hp~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      +.||||....|...  ....+|..|...
T Consensus       254 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~  281 (323)
T cd05584         254 QSHPFFRHVNWDDLLARKVEPPFKPLLQ  281 (323)
T ss_pred             hcCCCcCCCCHHHHhcCCCCCCcCCCCC
Confidence            99999999877544  333344444443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.3e-47  Score=373.28  Aligned_cols=274  Identities=39%  Similarity=0.685  Sum_probs=224.9

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHH-HHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK-ILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.+..+++         .||+|++.+...........+..|.. +++.++|+||+++++++...+..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~   71 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGS---------FYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKL   71 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEE
Confidence            369999999999999877655         49999998765544444444555554 57889999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|..++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus        72 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  149 (321)
T cd05603          72 YFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP  149 (321)
T ss_pred             EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence            9999999999998887654  55899999999999999999999999999999999999999999999999997421100


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                             .......+||+.|+|||++.+..++
T Consensus       150 -------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05603         150 -------------------------------------------------------EETTSTFCGTPEYLAPEVLRKEPYD  174 (321)
T ss_pred             -------------------------------------------------------CCccccccCCcccCCHHHhcCCCCC
Confidence                                                                   0011234789999999999998899


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++|||||||++|+|++|+.||...+.......+......++..     .+..+.++|.+||+.||.+|++....+.+++
T Consensus       175 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~  249 (321)
T cd05603         175 RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGG-----KTVAACDLLVGLLHKDQRRRLGAKADFLEIK  249 (321)
T ss_pred             CcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHccCCHhhcCCCCCCHHHHh
Confidence            99999999999999999999999888778888887776554432     2338999999999999999999766678999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      +|+||..++|...  ....+|..|....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (321)
T cd05603         250 NHVFFSPINWDDLYHKRITPPYNPNVAG  277 (321)
T ss_pred             CCCCcCCCCHHHHhcCCCCCCcCCCCCC
Confidence            9999999988653  4455555555444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.7e-48  Score=387.41  Aligned_cols=256  Identities=28%  Similarity=0.474  Sum_probs=216.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-C-----CCccce
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-H-----PFLPTL  154 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~nIv~l  154 (451)
                      +|.+.+.||+|+||.|-+|.+..+++         .||||+++...    ........|+.+|..|+ |     -|||++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e---------~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm  253 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGE---------IVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRM  253 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCc---------EEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEe
Confidence            58999999999999999999998876         59999998653    34455566999999986 4     479999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC--CEEE
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG--HIML  232 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~--~~kl  232 (451)
                      +++|...+|+|||+|++ ..+|+++++.+...+|+...++.|+.||+.||.+||+.||||+||||+||||...+  .+||
T Consensus       254 ~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKV  332 (586)
T KOG0667|consen  254 LDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKV  332 (586)
T ss_pred             eeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeE
Confidence            99999999999999999 89999999999888899999999999999999999999999999999999998654  7999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||.|....                                                          .+..+.+-++.|
T Consensus       333 IDFGSSc~~~----------------------------------------------------------q~vytYiQSRfY  354 (586)
T KOG0667|consen  333 IDFGSSCFES----------------------------------------------------------QRVYTYIQSRFY  354 (586)
T ss_pred             EecccccccC----------------------------------------------------------Ccceeeeecccc
Confidence            9999985322                                                          111134677889


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC------------------------
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ------------------------  368 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------  368 (451)
                      +|||+++|.+|+.+.||||||||++||++|.+.|.+.+..+.+..|+.....++..                        
T Consensus       355 RAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~  434 (586)
T KOG0667|consen  355 RAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVE  434 (586)
T ss_pred             ccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeee
Confidence            99999999999999999999999999999999999999998888887511111000                        


Q ss_pred             ------------------------CC----------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          369 ------------------------SP----------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       369 ------------------------~~----------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                              .+          .......+.+||++||.+||.+|+|    +.++|+||||.+.
T Consensus       435 ~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~  508 (586)
T KOG0667|consen  435 TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGT  508 (586)
T ss_pred             ecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC----HHHHhcCcccccc
Confidence                                    00          0012226789999999999999999    9999999999973

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.2e-47  Score=375.03  Aligned_cols=284  Identities=36%  Similarity=0.602  Sum_probs=232.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.++.+.+         .||+|++.+...........+..|+.++..++|+||+.+++++.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~   71 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTER---------IYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ   71 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            479999999999999999999887665         49999998754444445556777899999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.++.|+||||++||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~  150 (331)
T cd05624          72 DENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCL  150 (331)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEecccee
Confidence            9999999999999999999997642 458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                      ........+||+.|+|||++.
T Consensus       151 ~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05624         151 KMNQD------------------------------------------------------GTVQSSVAVGTPDYISPEILQ  176 (331)
T ss_pred             eccCC------------------------------------------------------CceeeccccCCcccCCHHHHh
Confidence            32110                                                      000111247999999999987


Q ss_pred             C-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC--
Q 013016          320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN--  392 (451)
Q Consensus       320 ~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~--  392 (451)
                      +     ..++.++|||||||++|+|++|+.||...+..+.+..+......++........+.++++||.+||..++.+  
T Consensus       177 ~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~  256 (331)
T cd05624         177 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLG  256 (331)
T ss_pred             ccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcC
Confidence            6     457889999999999999999999999888777777776644322211111122348999999999976654  


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      |++    ++++++||||+.++|...+...+|.+|....+
T Consensus       257 ~~~----~~~~~~h~~f~~~~~~~~~~~~~~~~p~~~~~  291 (331)
T cd05624         257 QNG----IEDFKKHAFFEGIDWENIRNLEAPYIPDVSSP  291 (331)
T ss_pred             CCC----HHHHhcCCCcCCCCHHHHhhCCCCccCCCCCc
Confidence            456    99999999999999998888888888876554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-49  Score=355.24  Aligned_cols=271  Identities=26%  Similarity=0.469  Sum_probs=234.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----HHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----KKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      ..|...+.||.|..++|-+|..+.++++         +|+|++.-....     .....+.-..|+.||+++ .||+|++
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e---------~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~   87 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKE---------FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIID   87 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccc---------eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            6788899999999999999999988775         999998643221     122344455689999998 6999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +.++|+.+..+++|+|+|+.|.|.|++...  -.+++...+.|++|+++|++|||.++||||||||+|||++++.++||+
T Consensus        88 l~D~yes~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~is  165 (411)
T KOG0599|consen   88 LQDVYESDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKIS  165 (411)
T ss_pred             eeeeccCcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEe
Confidence            999999999999999999999999999875  448999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++..+..                                                        ..+-...||||+|.
T Consensus       166 DFGFa~~l~~--------------------------------------------------------GekLrelCGTPgYL  189 (411)
T KOG0599|consen  166 DFGFACQLEP--------------------------------------------------------GEKLRELCGTPGYL  189 (411)
T ss_pred             ccceeeccCC--------------------------------------------------------chhHHHhcCCCccc
Confidence            9999864321                                                        11112359999999


Q ss_pred             CcccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          314 SPEVASG------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       314 aPE~~~~------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |||.+..      ..|+..+|+|++|+|||.||.|.+||.......+++.|+.++..+....|.++.. ..++||.+||+
T Consensus       190 APEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~-~~KdLIsrlLq  268 (411)
T KOG0599|consen  190 APETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISA-TVKDLISRLLQ  268 (411)
T ss_pred             ChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccc-cHHHHHHHHHe
Confidence            9999854      3478899999999999999999999999888889999999999998888877766 89999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCCcccccccCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP  422 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~  422 (451)
                      .||.+|.|    ++|+|.||||.++-+...+.+.|
T Consensus       269 Vdp~~Rit----ake~LaHpff~q~~~~~~r~msP  299 (411)
T KOG0599|consen  269 VDPTKRIT----AKEALAHPFFIQIAQQQARQMSP  299 (411)
T ss_pred             eCchhccc----HHHHhcChHHHHHHHhcccccCC
Confidence            99999999    99999999999876666666555

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-47  Score=376.74  Aligned_cols=273  Identities=38%  Similarity=0.680  Sum_probs=223.7

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeEEEEeCCeE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~~~~~~~~~  164 (451)
                      ||+|+||+||+|.++.+++         .||||++.+..............|..++...   .||||+.+++++...+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~   71 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRR---------IYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDL   71 (330)
T ss_pred             CCCCCceEEEEEEECCCCC---------EEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeE
Confidence            7999999999999887665         4999999876554444444555567777655   699999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||+++|+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++..... 
T Consensus        72 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~-  148 (330)
T cd05586          72 YLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLT-  148 (330)
T ss_pred             EEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC-
Confidence            9999999999999888764  5699999999999999999999999999999999999999999999999999742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC-CC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-SH  323 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~  323 (451)
                                                                            ........+||+.|+|||++.+. .+
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (330)
T cd05586         149 ------------------------------------------------------DNKTTNTFCGTTEYLAPEVLLDEKGY  174 (330)
T ss_pred             ------------------------------------------------------CCCCccCccCCccccCHHHHcCCCCC
Confidence                                                                  00011234799999999998764 47


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHH
Q 013016          324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV  403 (451)
Q Consensus       324 ~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~el  403 (451)
                      +.++|||||||++|+|++|+.||......+.+..+..+...++..    ..+.++.+||.+||+.||.+||+.+..+.++
T Consensus       175 ~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~li~~~L~~~P~~R~~~~~~~~~l  250 (330)
T cd05586         175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN----VLSDEGRQFVKGLLNRNPQHRLGAHRDAVEL  250 (330)
T ss_pred             CCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHH
Confidence            999999999999999999999999888888888887776655532    2334899999999999999999766669999


Q ss_pred             HcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          404 KTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       404 l~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ++||||...++...  ....+|..|....
T Consensus       251 l~h~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (330)
T cd05586         251 KEHPFFADIDWDLLSKKQITPPFKPIVDS  279 (330)
T ss_pred             hcCccccCCCHHHHHhCCCCCCccCCCCC
Confidence            99999999888754  3444555555543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.1e-47  Score=373.31  Aligned_cols=274  Identities=37%  Similarity=0.726  Sum_probs=221.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+.+         .||+|++.+...........+..|+.++.++ +|+||+.+++++...+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   71 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQ---------IYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRL   71 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEE
Confidence            469999999999999887765         4999999987665556667778899998888 699999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-  148 (327)
T cd05617          72 FLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG-  148 (327)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC-
Confidence            9999999999999887664  4599999999999999999999999999999999999999999999999999742100 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            ........+||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617         149 ------------------------------------------------------PGDTTSTFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             ------------------------------------------------------CCCceecccCCcccCCHHHHCCCCCC
Confidence                                                                  00011234799999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCC------C-hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAP------S-NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~------~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .++|||||||++|+|++|+.||...      . .......+......++..     .+..+.++|.+||+.||.+|++..
T Consensus       175 ~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF-----LSVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             chheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHhccCHHHcCCCC
Confidence            9999999999999999999999642      1 223344444444444332     233899999999999999999831


Q ss_pred             --CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          398 --RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       398 --~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                        ..+.++++||||++++|...  ....+|..|....
T Consensus       250 ~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
T cd05617         250 PQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITD  286 (327)
T ss_pred             CCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCC
Confidence              23579999999999999865  4445555565543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.9e-47  Score=374.24  Aligned_cols=281  Identities=40%  Similarity=0.737  Sum_probs=218.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +|++.++||+|+||+||+|.+....      ..+..||+|++.+..... ......+..|+.+++.+ +|+||+++++++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGH------DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF   74 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccC------CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE
Confidence            5899999999999999999875321      123369999998654332 23445677799999999 599999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        75 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~  152 (332)
T cd05614          75 QTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLS  152 (332)
T ss_pred             ecCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence            9999999999999999999988764  45899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                      .......++||+.|+|||++
T Consensus       153 ~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~~  178 (332)
T cd05614         153 KEFLSE------------------------------------------------------EKERTYSFCGTIEYMAPEII  178 (332)
T ss_pred             cccccc------------------------------------------------------CCCccccccCCccccCHHHh
Confidence            422100                                                      00111235799999999999


Q ss_pred             cCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       319 ~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      .+.. ++.++|||||||++|+|++|+.||....    .......+......++..     .+..+.+||.+||+.||++|
T Consensus       179 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~R  253 (332)
T cd05614         179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSF-----IGPEAQDLLHKLLRKDPKKR  253 (332)
T ss_pred             cCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCC-----CCHHHHHHHHHHcCCCHHHc
Confidence            8754 7889999999999999999999996432    223334444444333322     33489999999999999999


Q ss_pred             CCC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCC
Q 013016          394 LGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGM  428 (451)
Q Consensus       394 pt~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~  428 (451)
                      |++ ...++++++||||++.+|...  ....+|..|..
T Consensus       254 ~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  291 (332)
T cd05614         254 LGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSI  291 (332)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence            942 112889999999999887543  33444444443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4e-47  Score=372.18  Aligned_cols=273  Identities=38%  Similarity=0.689  Sum_probs=222.2

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHH-HHHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK-KILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||+||+|.++.+++         .||+|++.+...........+..|. .+++.++|+||+++++++...+.+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~   71 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEK---------FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL   71 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCC---------EEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeE
Confidence            369999999999999887655         4999999876543333333444444 456788999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~-  148 (325)
T cd05602          72 YFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-  148 (325)
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc-
Confidence            9999999999999988764  4588999999999999999999999999999999999999999999999999742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                            .......++||+.|+|||++.+..++
T Consensus       149 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05602         149 ------------------------------------------------------HNGTTSTFCGTPEYLAPEVLHKQPYD  174 (325)
T ss_pred             ------------------------------------------------------CCCCcccccCCccccCHHHHcCCCCC
Confidence                                                                  00011234799999999999998999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++|||||||++|+|++|+.||......+.+..+......++..     .+..+.++|.+||+.||.+|++.+..+.+++
T Consensus       175 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~  249 (325)
T cd05602         175 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN-----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIK  249 (325)
T ss_pred             CccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCC-----CCHHHHHHHHHHcccCHHHCCCCCCCHHHHh
Confidence            99999999999999999999999888888888887765443322     2338999999999999999999777788999


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      +|+||..++|..+  ....+|..|...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (325)
T cd05602         250 NHIFFSPINWDDLINKKITPPFNPNVS  276 (325)
T ss_pred             cCcccCCCCHHHHHhCCCCcCcCCCCC
Confidence            9999999988644  333444444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3e-47  Score=364.59  Aligned_cols=262  Identities=32%  Similarity=0.557  Sum_probs=212.8

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||+|+||.||++.++.+++         .||+|.+................|++++++++||||+++++++..+.+.|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~---------~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv   71 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGK---------MYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLV   71 (277)
T ss_pred             CCCCCceEEEEEEEccCCc---------EEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEE
Confidence            7999999999999887665         4999999765443333334455699999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||++|++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---  148 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---  148 (277)
T ss_pred             EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---
Confidence            99999999998887665556899999999999999999999999999999999999999999999999997432110   


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                                                                           .......|+..|+|||++.+..++.++
T Consensus       149 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~  175 (277)
T cd05607         149 -----------------------------------------------------KTITQRAGTNGYMAPEILKEEPYSYPV  175 (277)
T ss_pred             -----------------------------------------------------ceeeccCCCCCccCHHHHccCCCCCch
Confidence                                                                 000113688899999999998899999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHH
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPSN----ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV  403 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~el  403 (451)
                      |||||||++|+|++|+.||.....    .+..............    ...+.++++||.+||+.||++||++++...++
T Consensus       176 DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         176 DWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEH----QNFTEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccccc----ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            999999999999999999976433    2233333333322221    12344899999999999999999965555889


Q ss_pred             HcCCCcCCCCccccc
Q 013016          404 KTHPFFKGLNFALIR  418 (451)
Q Consensus       404 l~hp~~~~~~~~~~~  418 (451)
                      +.|+||+++++....
T Consensus       252 ~~h~~f~~~~~~~~~  266 (277)
T cd05607         252 RKHEFFKTINFPRLE  266 (277)
T ss_pred             hcChhhcCCCHHHHh
Confidence            999999999987664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-48  Score=368.59  Aligned_cols=285  Identities=36%  Similarity=0.614  Sum_probs=246.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .++.+.|...++||.|+||.||-|+-+.+++         .||.|.+.+.+...........+|..||.+++.+.||.+-
T Consensus       181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGK---------MYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla  251 (591)
T KOG0986|consen  181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGK---------MYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA  251 (591)
T ss_pred             hccccceeeeEEEecccccceeEEEEecchh---------hHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe
Confidence            4556789999999999999999999888876         5999999999888777777888899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      -+|++.+.+|||+..|+||+|.-+|.+..+..|++..++.++.+|+.||++||+.+||+|||||+|||+|+.|+++|.|+
T Consensus       252 YAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDL  331 (591)
T KOG0986|consen  252 YAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDL  331 (591)
T ss_pred             eeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeecc
Confidence            99999999999999999999998888877778999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|........                                                        ....+||.+||||
T Consensus       332 GLAvei~~g~~--------------------------------------------------------~~~rvGT~GYMAP  355 (591)
T KOG0986|consen  332 GLAVEIPEGKP--------------------------------------------------------IRGRVGTVGYMAP  355 (591)
T ss_pred             ceEEecCCCCc--------------------------------------------------------cccccCcccccCH
Confidence            99853321111                                                        1123899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |++.+..|+...|.|||||+||||+.|+.||......    +.-+.+......++..     .+.++++|++.+|++||+
T Consensus       356 Evl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~k-----FS~eakslc~~LL~Kdp~  430 (591)
T KOG0986|consen  356 EVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDK-----FSEEAKSLCEGLLTKDPE  430 (591)
T ss_pred             HHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccc-----cCHHHHHHHHHHHccCHH
Confidence            9999999999999999999999999999999864433    3444444444444433     344999999999999999


Q ss_pred             CcCCCC-CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          392 NRLGSK-RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       392 ~Rpt~~-~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      +|.... .+++++.+||||+.++|..+  ..+.||++|.+.-
T Consensus       431 ~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~a  472 (591)
T KOG0986|consen  431 KRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGA  472 (591)
T ss_pred             HhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccc
Confidence            999974 77999999999999999865  8899999987653

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.7e-47  Score=367.04  Aligned_cols=259  Identities=25%  Similarity=0.355  Sum_probs=207.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|.+.++||.|+||+||+|.++.+++         .||+|++.....  ......+.+|+.++++++|+||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~   72 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTEN---------LVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDII   72 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCC---------EEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3789999999999999999999887665         499999865421  12234556799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..++||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~  150 (288)
T cd07871          73 HTERCLTLVFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLA  150 (288)
T ss_pred             cCCCeEEEEEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcce
Confidence            99999999999995 5898887654 245899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......|++.|+|||++
T Consensus       151 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~  175 (288)
T cd07871         151 RAKSVPT-------------------------------------------------------KTYSNEVVTLWYRPPDVL  175 (288)
T ss_pred             eeccCCC-------------------------------------------------------ccccCceecccccChHHh
Confidence            4321000                                                       000123678899999998


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC-------------------------CC
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-------------------------SS  372 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~-------------------------~~  372 (451)
                      .+ ..++.++|||||||++|+|++|+.||......+.+..+.......+...+                         ..
T Consensus       176 ~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T cd07871         176 LGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAP  255 (288)
T ss_pred             cCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCC
Confidence            76 45899999999999999999999999887776665555432111100000                         01


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+.++++||++||++||.+|||    ++|+|+||||
T Consensus       256 ~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f  288 (288)
T cd07871         256 RLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF  288 (288)
T ss_pred             CCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence            12347899999999999999999    9999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-48  Score=360.82  Aligned_cols=265  Identities=26%  Similarity=0.391  Sum_probs=216.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|...+.||.|+||.|+.|.++.+++.         ||||.+... +......++..+|+++|+.++|+||+.+++++.
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~---------VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEK---------VAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCE---------eehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            4577789999999999999999988764         999998743 345566778889999999999999999999986


Q ss_pred             e-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 A-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      .     -+.+|+|+|+| +.+|.++++..  +.++...++.++.||+.||+|+|+.||+||||||.|+|++.+..+||||
T Consensus        92 p~~~~~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             cccccccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecc
Confidence            5     35789999999 88999999885  4499999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|+.....                                                     ........++-|.+|+|
T Consensus       169 FGLAR~~~~~-----------------------------------------------------~~~~~mTeYVaTRWYRA  195 (359)
T KOG0660|consen  169 FGLARYLDKF-----------------------------------------------------FEDGFMTEYVATRWYRA  195 (359)
T ss_pred             ccceeecccc-----------------------------------------------------CcccchhcceeeeeecC
Confidence            9999643211                                                     00111123578999999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-----------------------CCCCC-
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-----------------------FPTQS-  369 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----------------------~~~~~-  369 (451)
                      ||++.. ..|+.++||||+|||+.||++|++.|.+.+....+..|+.-...                       .+... 
T Consensus       196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f  275 (359)
T KOG0660|consen  196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF  275 (359)
T ss_pred             HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH
Confidence            999865 56999999999999999999999999987665555554432111                       11111 


Q ss_pred             ---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 ---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                         .+.. +..+.+|+.+||.+||.+|+|    ++|+|.||||.+...+
T Consensus       276 ~~~fp~a-~p~AidLlekmL~fdP~kRit----a~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  276 SSIFPNA-NPLAIDLLEKMLVFDPKKRIT----AEEALAHPYLAPYHDP  319 (359)
T ss_pred             HHHcCCC-CHHHHHHHHHHhccCccccCC----HHHHhcChhhhhhcCC
Confidence               1122 238899999999999999999    9999999999995544

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.4e-46  Score=372.62  Aligned_cols=257  Identities=28%  Similarity=0.438  Sum_probs=203.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ...+++|++.++||.|+||+||+|.++.+++         .||||++....  .......+.+|+++++.++|+||++++
T Consensus        70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~  138 (353)
T PLN00034         70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGR---------LYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCH  138 (353)
T ss_pred             CCCHHHHhhhhhccCCCCeEEEEEEECCCCC---------EEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceee
Confidence            3345789999999999999999999876655         49999986542  223345677899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+.+++||||+.+++|.+.      ....+..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       139 ~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~Df  212 (353)
T PLN00034        139 DMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADF  212 (353)
T ss_pred             eEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccc
Confidence            999999999999999999998653      23567888999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                       .......+||..|+||
T Consensus       213 G~~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aP  237 (353)
T PLN00034        213 GVSRILAQT-------------------------------------------------------MDPCNSSVGTIAYMSP  237 (353)
T ss_pred             ccceecccc-------------------------------------------------------cccccccccCccccCc
Confidence            997432110                                                       0001123789999999


Q ss_pred             ccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          316 EVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       316 E~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |++..     ...+.++|||||||++|||++|+.||......+   ....+....   ..... ...+.++.+||.+||+
T Consensus       238 E~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~l~~li~~~l~  313 (353)
T PLN00034        238 ERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ---PPEAP-ATASREFRHFISCCLQ  313 (353)
T ss_pred             cccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC---CCCCC-CccCHHHHHHHHHHcc
Confidence            98743     234578999999999999999999997533222   222222111   11111 2234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      .||++||+    +.||++||||.+.
T Consensus       314 ~~P~~Rpt----~~ell~hp~~~~~  334 (353)
T PLN00034        314 REPAKRWS----AMQLLQHPFILRA  334 (353)
T ss_pred             CChhhCcC----HHHHhcCcccccC
Confidence            99999999    9999999999994

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.1e-46  Score=386.71  Aligned_cols=256  Identities=27%  Similarity=0.373  Sum_probs=200.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC------CCCcc
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD------HPFLP  152 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~nIv  152 (451)
                      .++|.+.++||+|+||+||+|.+...++         .||||+++...    ........|+.+++.+.      |.+|+
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~---------~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~  194 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKE---------YCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLM  194 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCe---------EEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCccee
Confidence            3789999999999999999999876654         49999996432    11223344666766664      44588


Q ss_pred             ceeEEEEeC-CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCC--
Q 013016          153 TLYAEFEAS-NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDG--  228 (451)
Q Consensus       153 ~l~~~~~~~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~--  228 (451)
                      +++++|..+ +++|+|||++ |++|.+++...  +.+++..++.|+.||+.||+|||+ .|||||||||+|||++.++  
T Consensus       195 ~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~  271 (467)
T PTZ00284        195 KIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTV  271 (467)
T ss_pred             eeEEEEEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcc
Confidence            899988754 5899999998 88998888764  569999999999999999999997 6999999999999998765  


Q ss_pred             --------------CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccc
Q 013016          229 --------------HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF  294 (451)
Q Consensus       229 --------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (451)
                                    .+||+|||.+....                                                    
T Consensus       272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~----------------------------------------------------  299 (467)
T PTZ00284        272 VDPVTNRALPPDPCRVRICDLGGCCDER----------------------------------------------------  299 (467)
T ss_pred             cccccccccCCCCceEEECCCCccccCc----------------------------------------------------
Confidence                          49999999863110                                                    


Q ss_pred             ccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC------
Q 013016          295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ------  368 (451)
Q Consensus       295 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~------  368 (451)
                            .....++||+.|||||++.+..|+.++|||||||++|||++|+.||...+..+.+..+......++..      
T Consensus       300 ------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~  373 (467)
T PTZ00284        300 ------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCG  373 (467)
T ss_pred             ------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhcc
Confidence                  01113579999999999999999999999999999999999999998877665544443321111100      


Q ss_pred             -------------------------------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          369 -------------------------------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       369 -------------------------------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                                     ......+..+.+||.+||.+||++|||    ++|+|+||||++.
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~  444 (467)
T PTZ00284        374 TEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY  444 (467)
T ss_pred             chhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence                                           000112336789999999999999999    9999999999983

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.4e-47  Score=357.33  Aligned_cols=267  Identities=29%  Similarity=0.388  Sum_probs=220.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~  158 (451)
                      ..|..+++||+|+||+||+|+.+.+++         .||+|.++-.... +..-....+|+.+++.++|+| ||.+++++
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~---------~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~   80 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGK---------FVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVI   80 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCC---------EEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeee
Confidence            568888899999999999999988775         5999999865321 223445567999999999999 99999999


Q ss_pred             EeCC------eEEEEEeeccCCchhhhhhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EASN------FSCIVMEFCSGGDLHSLRHKQPH--KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~~------~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ...+      .++|||||+ .-+|.+++.....  ..++...++.+++||+.||+|||++||+||||||+||||+.+|.+
T Consensus        81 ~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~l  159 (323)
T KOG0594|consen   81 HTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVL  159 (323)
T ss_pred             eecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcE
Confidence            8877      899999999 7899999988753  368889999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||+|.....+-.                                              .         ...-++|.
T Consensus       160 KlaDFGlAra~~ip~~----------------------------------------------~---------yt~evvTl  184 (323)
T KOG0594|consen  160 KLADFGLARAFSIPMR----------------------------------------------T---------YTPEVVTL  184 (323)
T ss_pred             eeeccchHHHhcCCcc----------------------------------------------c---------ccccEEEe
Confidence            9999999853221000                                              0         01227899


Q ss_pred             CccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcC---------------
Q 013016          311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS---------------  374 (451)
Q Consensus       311 ~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------  374 (451)
                      .|+|||++.|. .|+..+||||+|||++||++++..|.+.++.+.+..|.+.........|+...               
T Consensus       185 WYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~  264 (323)
T KOG0594|consen  185 WYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP  264 (323)
T ss_pred             eccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCc
Confidence            99999999997 58999999999999999999999999999988888887643333222222110               


Q ss_pred             ----------hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          375 ----------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       375 ----------~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                                ..+..+++.+||+.+|.+|.+    ++.+|.||||++++...
T Consensus       265 ~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  265 KDLSSILPKLDPDGIELLSKLLQYDPAKRIS----AKGALTHPYFSELPEKS  312 (323)
T ss_pred             cchHHhccccCccHHHHHHHHhccCcccCcC----HHHHhcChhhcccccch
Confidence                      126789999999999999999    99999999999976543

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=8.1e-47  Score=366.32  Aligned_cols=263  Identities=28%  Similarity=0.381  Sum_probs=206.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.++.+++         .||||++.....  ......+.+|+.+++.++|+||+++++++.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   73 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGK---------LVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIH   73 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCC---------EEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEe
Confidence            689999999999999999999886655         499999975422  122334567999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .....|+||||+ +++|.+++.... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        74 ~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~  151 (303)
T cd07869          74 TKETLTLVFEYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR  151 (303)
T ss_pred             cCCeEEEEEECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcce
Confidence            999999999999 568877776543 458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|++.|+|||++.
T Consensus       152 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  176 (303)
T cd07869         152 AKSVPS-------------------------------------------------------HTYSNEVVTLWYRPPDVLL  176 (303)
T ss_pred             eccCCC-------------------------------------------------------ccCCCCcccCCCCChHHHc
Confidence            211000                                                       0001236889999999987


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCC-----------CCC--------CC--------
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTF-----------PTQ--------SP--------  370 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~-----------~~~--------~~--------  370 (451)
                      +. .++.++|||||||++|+|++|..||.+..+. +.+..+.......           +..        ..        
T Consensus       177 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (303)
T cd07869         177 GSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWN  256 (303)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhh
Confidence            64 5789999999999999999999999875432 2333322110000           000        00        


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      ......++.+||.+||++||++|||    +.|+|+||||++++.
T Consensus       257 ~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h~~f~~~~~  296 (303)
T cd07869         257 KLSYVNHAEDLASKLLQCFPKNRLS----AQAALSHEYFSDLPP  296 (303)
T ss_pred             ccCCChHHHHHHHHHhccCchhccC----HHHHhcCcccccCCh
Confidence            0012237889999999999999999    999999999998654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=9.2e-47  Score=362.75  Aligned_cols=260  Identities=25%  Similarity=0.369  Sum_probs=207.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|+++.+++         .||+|++..... .......+.+|+.+++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   70 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKE---------IVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFR   70 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCc---------EEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEe
Confidence            469999999999999999999987665         499999975422 2233456677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||++++.|..+...  ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~  148 (287)
T cd07848          71 RRGKLYLVFEYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFAR  148 (287)
T ss_pred             cCCEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence            99999999999988777655433  2458999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                      ........|++.|+|||++.
T Consensus       149 ~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848         149 NLSEGS------------------------------------------------------NANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             cccccc------------------------------------------------------cccccccccccccCCcHHHc
Confidence            321100                                                      00011246899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCCC--------CC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQSP--------SS  372 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~~--------~~  372 (451)
                      +..++.++|||||||++|+|++|+.||...+..+.+..+......                   .+....        ..
T Consensus       175 ~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T cd07848         175 GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLG  254 (287)
T ss_pred             CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhc
Confidence            988999999999999999999999999887665544433321111                   010000        01


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+.++.+||++||++||++|||    ++++|+||||
T Consensus       255 ~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f  287 (287)
T cd07848         255 ILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF  287 (287)
T ss_pred             ccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence            13447999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.6e-47  Score=369.11  Aligned_cols=274  Identities=38%  Similarity=0.711  Sum_probs=223.2

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||++.+....      ..+..||+|++.+..... .....+..|++++++++|+||+++++++..++.+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   74 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGP------DAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLY   74 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccC------CCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEE
Confidence            57999999999999864221      122359999998764332 23345667999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+++++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... 
T Consensus        75 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-  151 (318)
T cd05582          75 LILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-  151 (318)
T ss_pred             EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-
Confidence            999999999999988664  45899999999999999999999999999999999999999999999999997422100 


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                                                                            ........|++.|+|||++.+..++.
T Consensus       152 ------------------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~  177 (318)
T cd05582         152 ------------------------------------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQ  177 (318)
T ss_pred             ------------------------------------------------------CCceecccCChhhcCHHHHcCCCCCC
Confidence                                                                  00112347899999999999888999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC-ChHHHH
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~-~~~ell  404 (451)
                      ++|||||||++|+|++|+.||......+.+..+.......+..     .+.++.+||++||+.||.+||++.+ .+.+++
T Consensus       178 ~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~  252 (318)
T cd05582         178 SADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQF-----LSPEAQSLLRALFKRNPANRLGAGPDGVEEIK  252 (318)
T ss_pred             ccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHh
Confidence            9999999999999999999999888888888887766655433     2338999999999999999999532 367899


Q ss_pred             cCCCcCCCCcccc--cccCCCCCCCC
Q 013016          405 THPFFKGLNFALI--RSLTPPEIPGM  428 (451)
Q Consensus       405 ~hp~~~~~~~~~~--~~~~~~~~p~~  428 (451)
                      .||||+.++|...  ....+|..|..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (318)
T cd05582         253 RHPFFSTIDWNKLYRREIKPPFKPAV  278 (318)
T ss_pred             CCCCcCCCCHHHHHhcCCCCCcCCCC
Confidence            9999999988654  33444444544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=7.3e-46  Score=357.28  Aligned_cols=284  Identities=39%  Similarity=0.706  Sum_probs=237.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|++|.||+|.+...++         .||+|++.............+..|++++++++|+||+++++++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGK---------YYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ   71 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE
Confidence            479999999999999999999887655         49999998765555556677888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++|++|+||+|+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~  149 (290)
T cd05580          72 DDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAK  149 (290)
T ss_pred             cCCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence            999999999999999999998775  569999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                          .....|++.|+|||.+.
T Consensus       150 ~~~~~----------------------------------------------------------~~~~~~~~~y~aPE~~~  171 (290)
T cd05580         150 RVKGR----------------------------------------------------------TYTLCGTPEYLAPEIIL  171 (290)
T ss_pred             ccCCC----------------------------------------------------------CCCCCCCccccChhhhc
Confidence            22100                                                          11236888999999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~  398 (451)
                      +..++.++||||||+++|+|++|+.||...........+..+...++...     +..+.++|.+||+.||.+|++. ..
T Consensus       172 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~li~~~l~~~p~~R~~~~~~  246 (290)
T cd05580         172 SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFF-----SPDAKDLIRNLLQVDLTKRLGNLKN  246 (290)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccC-----CHHHHHHHHHHccCCHHHccCcccC
Confidence            88889999999999999999999999988777777777776665554332     3489999999999999999921 12


Q ss_pred             ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCC
Q 013016          399 GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFP  437 (451)
Q Consensus       399 ~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~  437 (451)
                      .++|+++||||+.++|..+  ..+..|..|....+...+++
T Consensus       247 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (290)
T cd05580         247 GVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNF  287 (290)
T ss_pred             CHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccccccc
Confidence            2999999999999998654  55566666666554444433

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=7.9e-46  Score=356.25  Aligned_cols=280  Identities=34%  Similarity=0.569  Sum_probs=225.7

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |+..+.||+|+||+||+|.+..+.+         .||+|++.+...........+..|++++++++|+||+.+++++..+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~   72 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGK---------MYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK   72 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCc---------EEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC
Confidence            7788999999999999999887665         4999999876544444445567799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..|+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632          73 DALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             CEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence            99999999999999998887655557999999999999999999999999999999999999999999999999987421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ...                                                        .......|+..|+|||++.+.
T Consensus       153 ~~~--------------------------------------------------------~~~~~~~g~~~~~aPE~~~~~  176 (285)
T cd05632         153 PEG--------------------------------------------------------ESIRGRVGTVGYMAPEVLNNQ  176 (285)
T ss_pred             CCC--------------------------------------------------------CcccCCCCCcCccChHHhcCC
Confidence            100                                                        000123689999999999988


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC-CCh
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGA  400 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~-~~~  400 (451)
                      .++.++|||||||++|+|++|..||...........+.............. .+.++.+|+.+||+.||++||+.. ..+
T Consensus       177 ~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~P~~R~~~~~~~~  255 (285)
T cd05632         177 RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAK-FSEEAKSICKMLLTKDPKQRLGCQEEGA  255 (285)
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCcc-CCHHHHHHHHHHccCCHhHcCCCcccCh
Confidence            899999999999999999999999987665544333332221111111222 333889999999999999999963 347


Q ss_pred             HHHHcCCCcCCCCcccc--cccCCCCCCC
Q 013016          401 ADVKTHPFFKGLNFALI--RSLTPPEIPG  427 (451)
Q Consensus       401 ~ell~hp~~~~~~~~~~--~~~~~~~~p~  427 (451)
                      .+++.|+||+.+++...  ....+|..|.
T Consensus       256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05632         256 GEVKRHPFFRNMNFKRLEAGMLDPPFVPD  284 (285)
T ss_pred             HHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence            89999999999988743  5555666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-47  Score=365.86  Aligned_cols=264  Identities=27%  Similarity=0.469  Sum_probs=232.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +-|.+.+.||+|.|+.|-+|++-.++..         ||||++.+.....-.. ..+..|+..|+..+|||||++|++..
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGek---------VAVKviDKTKlD~~st-~hlfqEVRCMKLVQHpNiVRLYEViD   87 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEK---------VAVKVIDKTKLDTLST-GHLFQEVRCMKLVQHPNIVRLYEVID   87 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccce---------eEEEEecccccchhhh-hHHHHHHHHHHHhcCcCeeeeeehhc
Confidence            4599999999999999999998887764         9999999887654433 44556999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg~a  238 (451)
                      ....+|||+|+-.+|+|++|+-... ..+.+..++++++||+.|+.|+|+..+|||||||+||.+.+ -|-|||+|||++
T Consensus        88 TQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFS  166 (864)
T KOG4717|consen   88 TQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFS  166 (864)
T ss_pred             ccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeecccc
Confidence            9999999999999999999998764 44999999999999999999999999999999999998875 589999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ..+.                                      ..                  .+-.++||+..|.|||++
T Consensus       167 Nkf~--------------------------------------PG------------------~kL~TsCGSLAYSAPEIL  190 (864)
T KOG4717|consen  167 NKFQ--------------------------------------PG------------------KKLTTSCGSLAYSAPEIL  190 (864)
T ss_pred             ccCC--------------------------------------Cc------------------chhhcccchhhccCchhh
Confidence            3221                                      11                  122356999999999999


Q ss_pred             cCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHG-NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~-~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +|..|+ +++||||||||||.|++|+.||...++.+.+-.|+..+...|.....     ++++||..||..||.+|.+  
T Consensus       191 LGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~-----eCrdLI~sMLvRdPkkRAs--  263 (864)
T KOG4717|consen  191 LGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSK-----ECRDLIQSMLVRDPKKRAS--  263 (864)
T ss_pred             hcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhH-----HHHHHHHHHHhcCchhhcc--
Confidence            999884 68999999999999999999999999999999999999888876443     9999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCCcccccc
Q 013016          398 RGAADVKTHPFFKGLNFALIRS  419 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~~~  419 (451)
                        ++||..|+|++.++......
T Consensus       264 --lEeI~s~~Wlq~~D~~~sT~  283 (864)
T KOG4717|consen  264 --LEEIVSTSWLQAGDRGLSTA  283 (864)
T ss_pred             --HHHHhccccccCCCCCcccc
Confidence              99999999999988876653

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-48  Score=360.75  Aligned_cols=298  Identities=33%  Similarity=0.635  Sum_probs=254.6

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~  156 (451)
                      ...+|..+..||.|+||+|.+|..+++.+         +||||++++........++--..|.++|.... -|.++.+..
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdE---------LyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHS  417 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDE---------LYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHS  417 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcch---------hhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHH
Confidence            34689999999999999999998877765         79999999987766666677777888888774 678999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      +|+.-+.+|+||||+.||+|--.+++.  ++|.+..+..++.+|+-||-|||++|||+||||.+|||++.+|.+||+|||
T Consensus       418 cFQTmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFG  495 (683)
T KOG0696|consen  418 CFQTMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFG  495 (683)
T ss_pred             HhhhhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecc
Confidence            999999999999999999997666664  679999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++..-                                                       ....++.++|||+.|+|||
T Consensus       496 mcKEni-------------------------------------------------------~~~~TTkTFCGTPdYiAPE  520 (683)
T KOG0696|consen  496 MCKENI-------------------------------------------------------FDGVTTKTFCGTPDYIAPE  520 (683)
T ss_pred             cccccc-------------------------------------------------------cCCcceeeecCCCcccccc
Confidence            985210                                                       0223455789999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++...+|+.++|.||+|++|||||.|++||.+.+.++.+..|......+|.....     ++.++++.+|.+.|.+|...
T Consensus       521 Ii~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSk-----EAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  521 IIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSK-----EAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             eEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccH-----HHHHHHHHHhhcCCccccCC
Confidence            9999999999999999999999999999999999999999999999988876543     89999999999999999986


Q ss_pred             -CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCccc
Q 013016          397 -KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQST  446 (451)
Q Consensus       397 -~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  446 (451)
                       ..+-++|..||||+.|+|..+  +.+.||+.|..+--+.-.+++.......+
T Consensus       596 g~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~Ft~~~~  648 (683)
T KOG0696|consen  596 GPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFFTREPT  648 (683)
T ss_pred             CCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhhhhHHHhcCCC
Confidence             344578999999999999754  89999999998543333334443333333

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1e-45  Score=363.15  Aligned_cols=260  Identities=28%  Similarity=0.414  Sum_probs=212.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||.|+||.||+|.++.++.         .||+|++....  .......+.+|+++++.++|+||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   72 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGL---------IMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAF   72 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCc---------EEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            3789999999999999999999887665         49999997542  223445678899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ...+..++||||++|++|.+++...  ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  150 (331)
T cd06649          73 YSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV  150 (331)
T ss_pred             EECCEEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence            9999999999999999999998765  4589999999999999999999986 699999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.....                                                         .......|++.|+|||+
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~~g~~~y~aPE~  173 (331)
T cd06649         151 SGQLID---------------------------------------------------------SMANSFVGTRSYMSPER  173 (331)
T ss_pred             cccccc---------------------------------------------------------cccccCCCCcCcCCHhH
Confidence            742210                                                         00112468999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC----------------------------------
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL----------------------------------  363 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------------------------  363 (451)
                      +.+..++.++|||||||++|+|++|+.||......+....+ ....                                  
T Consensus       174 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (331)
T cd06649         174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF-GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMA  252 (331)
T ss_pred             hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh-cccccccccCCccccCcccccccccccccccccccchh
Confidence            99988999999999999999999999999766544432221 1100                                  


Q ss_pred             ----------CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          364 ----------TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       364 ----------~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                                ...........+.++++||.+||.+||++|||    ++||++||||+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt----~~ell~h~~~~~~~  308 (331)
T cd06649         253 IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD----LKMLMNHTFIKRSE  308 (331)
T ss_pred             HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC----HHHHhcChHHhhcc
Confidence                      00000111123458999999999999999999    99999999998843

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.3e-46  Score=371.49  Aligned_cols=259  Identities=23%  Similarity=0.385  Sum_probs=204.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ++..++|.+.++||+|+||.||+|.+..+.+         .||+|....         ..+.+|+.++++++||||++++
T Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~---------~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~  149 (391)
T PHA03212         88 GIEKAGFSILETFTPGAEGFAFACIDNKTCE---------HVVIKAGQR---------GGTATEAHILRAINHPSIIQLK  149 (391)
T ss_pred             ccccCCcEEEEEEcCCCCeEEEEEEECCCCC---------EEEEechhh---------hhhHHHHHHHHhCCCCCCCCEe
Confidence            3455789999999999999999999987766         399997542         2345699999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++|..+.+.|+|||++ +++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       150 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DF  226 (391)
T PHA03212        150 GTFTYNKFTCLILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDF  226 (391)
T ss_pred             EEEEECCeeEEEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeC
Confidence            9999999999999999 67888887664  45899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                      ........+||+.|+||
T Consensus       227 G~a~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aP  252 (391)
T PHA03212        227 GAACFPVDI------------------------------------------------------NANKYYGWAGTIATNAP  252 (391)
T ss_pred             Ccccccccc------------------------------------------------------cccccccccCccCCCCh
Confidence            997421100                                                      00011234799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhcCCCCCCCC--------------------
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-------NETTLRNIVKKPLTFPTQ--------------------  368 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-------~~~~~~~i~~~~~~~~~~--------------------  368 (451)
                      |++.+..++.++|||||||++|+|++|+.||....       ....+..++......+..                    
T Consensus       253 E~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  332 (391)
T PHA03212        253 ELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKS  332 (391)
T ss_pred             hhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhcc
Confidence            99999899999999999999999999998875321       112222222211110000                    


Q ss_pred             ------C--CC--CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          369 ------S--PS--SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       369 ------~--~~--~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                            .  +.  ...+.++.+||.+||++||.+|||    +.|+|+||||+++.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt----a~elL~hp~f~~~~  383 (391)
T PHA03212        333 SRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS----AEALLDFAAFQDIP  383 (391)
T ss_pred             CCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC----HHHHhcChhhccCC
Confidence                  0  00  011337889999999999999999    99999999998854

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=4.6e-46  Score=357.95  Aligned_cols=276  Identities=37%  Similarity=0.590  Sum_probs=220.4

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.+.||+|+||.||+|.+..+++         .||+|.+.+...........+..|+.++++++|+||+.+++.+...
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~   72 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK   72 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCc---------eEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC
Confidence            7788899999999999999988765         4999999765443333345566799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ++.|+||||++|++|.+++.......+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630          73 DALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             CEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence            99999999999999999887655556999999999999999999999999999999999999999999999999987421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ...                                                        .......|+..|+|||++.+.
T Consensus       153 ~~~--------------------------------------------------------~~~~~~~g~~~y~aPE~~~~~  176 (285)
T cd05630         153 PEG--------------------------------------------------------QTIKGRVGTVGYMAPEVVKNE  176 (285)
T ss_pred             CCC--------------------------------------------------------ccccCCCCCccccChHHHcCC
Confidence            100                                                        000123689999999999998


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-C
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-K  397 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~  397 (451)
                      .++.++|||||||++|+|++|+.||......   +....+.....   ... ....+.++.+|+.+||+.||++|||. +
T Consensus       177 ~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~li~~~l~~~p~~R~s~~~  252 (285)
T cd05630         177 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ---EEY-SEKFSPDARSLCKMLLCKDPKERLGCQG  252 (285)
T ss_pred             CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh---hhc-CccCCHHHHHHHHHHhhcCHHHccCCCC
Confidence            8999999999999999999999999864332   22222222111   111 12234489999999999999999983 1


Q ss_pred             CChHHHHcCCCcCCCCcccccc--cCCCCCC
Q 013016          398 RGAADVKTHPFFKGLNFALIRS--LTPPEIP  426 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~~~--~~~~~~p  426 (451)
                      -.+.|+++||||+++++.....  ..||..|
T Consensus       253 ~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05630         253 GGAREVKEHPLFKQINFKRLEAGMLEPPFKP  283 (285)
T ss_pred             CchHHHHcChhhhccCHHHHhcCCCCCCCCC
Confidence            2368999999999998886533  4455555

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4.1e-46  Score=358.75  Aligned_cols=260  Identities=26%  Similarity=0.344  Sum_probs=204.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~  156 (451)
                      ++|++.+.||+|+||+||+|.+.....        ..||+|++....... .......+|+.+++.+   .||||+++++
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~--------~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~   71 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGG--------RFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFD   71 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCC--------eEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEE
Confidence            369999999999999999998754321        149999987543211 1223344566666665   6999999999


Q ss_pred             EEE-----eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          157 EFE-----ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       157 ~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      ++.     ....+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~k  150 (290)
T cd07862          72 VCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  150 (290)
T ss_pred             EEecccCCCCCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEE
Confidence            885     345799999999 57999998876666799999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++......                                                        .......||+.
T Consensus       151 l~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~  174 (290)
T cd07862         151 LADFGLARIYSFQ--------------------------------------------------------MALTSVVVTLW  174 (290)
T ss_pred             EccccceEeccCC--------------------------------------------------------ccccccccccc
Confidence            9999997422100                                                        01112468999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC---------------------
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP---------------------  370 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------  370 (451)
                      |+|||++.+..++.++|||||||++|+|++|+.||.+....+.+..+...........+                     
T Consensus       175 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T cd07862         175 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  254 (290)
T ss_pred             ccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHH
Confidence            99999999888999999999999999999999999998877777766543211100000                     


Q ss_pred             -CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          371 -SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       371 -~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                       ....+..+.+|+.+||+.||++|||    +.|+|+||||
T Consensus       255 ~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~hp~f  290 (290)
T cd07862         255 FVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYF  290 (290)
T ss_pred             HccCCCHHHHHHHHHHhccCchhcCC----HHHHhcCCCC
Confidence             0112337889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-47  Score=395.91  Aligned_cols=287  Identities=38%  Similarity=0.687  Sum_probs=249.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ....++|.+++.||.|+||.|.+++.+.+.+         +||+|++++-..........|..|..+|..-+.+-|+.++
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~---------VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh  141 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEK---------VYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLH  141 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeecccc---------chhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHH
Confidence            3445889999999999999999999988876         6999999986665555666777899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      -+|.++.++|+||||++||+|..++....  ++++..+++++..|+.||.-||+.|+|||||||+|||++..|++||+||
T Consensus       142 yAFQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADF  219 (1317)
T KOG0612|consen  142 YAFQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADF  219 (1317)
T ss_pred             HHhcCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccc
Confidence            99999999999999999999999998874  7999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |.|..+..                                                      +...+...-+|||-|.+|
T Consensus       220 GsClkm~~------------------------------------------------------dG~V~s~~aVGTPDYISP  245 (1317)
T KOG0612|consen  220 GSCLKMDA------------------------------------------------------DGTVRSSVAVGTPDYISP  245 (1317)
T ss_pred             hhHHhcCC------------------------------------------------------CCcEEeccccCCCCccCH
Confidence            99853321                                                      122233345999999999


Q ss_pred             ccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          316 EVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--PLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       316 E~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      |++..     +.|+..+|.||+||++|||+.|..||...+-.+.+.+|++-  .+.+|...  . .+.++++||.++++ 
T Consensus       246 EvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~--~-VSeeakdLI~~ll~-  321 (1317)
T KOG0612|consen  246 EVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDET--D-VSEEAKDLIEALLC-  321 (1317)
T ss_pred             HHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccc--c-cCHHHHHHHHHHhc-
Confidence            99853     56899999999999999999999999999999999999986  56666222  2 34499999999886 


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCC
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK  432 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~  432 (451)
                      +|+.|.. ..+++++..||||.+++|..+|...||.+|-+.++.
T Consensus       322 ~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP~vPevssd~  364 (1317)
T KOG0612|consen  322 DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSSDD  364 (1317)
T ss_pred             Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCCCCCcCCCCC
Confidence            5667766 555999999999999999999999999999999864

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.4e-46  Score=365.80  Aligned_cols=266  Identities=25%  Similarity=0.383  Sum_probs=206.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||+|+||.||+|.++.+++         .||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   70 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGE---------KVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLP   70 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCC---------EEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEec
Confidence            58999999999999999999887665         499999874322 12233456789999999999999999998854


Q ss_pred             C-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          161 S-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       161 ~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      .     ..+|+||||| +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        71 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Df  147 (338)
T cd07859          71 PSRREFKDIYVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDF  147 (338)
T ss_pred             cCCCCCceEEEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccC
Confidence            3     3589999999 67898888764  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    ........+||+.|+||
T Consensus       148 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~t~~y~aP  175 (338)
T cd07859         148 GLARVAFNDTP----------------------------------------------------TAIFWTDYVATRWYRAP  175 (338)
T ss_pred             ccccccccccC----------------------------------------------------ccccccCCCCCCCcCCH
Confidence            99843210000                                                    00001124789999999


Q ss_pred             ccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--------------------------CCCCC-
Q 013016          316 EVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--------------------------PLTFP-  366 (451)
Q Consensus       316 E~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--------------------------~~~~~-  366 (451)
                      |++.+  ..++.++|||||||++|+|++|+.||.+......+..+...                          ....+ 
T Consensus       176 E~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  255 (338)
T cd07859         176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPF  255 (338)
T ss_pred             HHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCch
Confidence            99876  56899999999999999999999999876543332221110                          00000 


Q ss_pred             CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       367 ~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      ....+. .+..+.++|.+||+.||++||+    ++|+|+||||+++....
T Consensus       256 ~~~~~~-~~~~~~~li~~~l~~~P~~Rpt----~~e~l~hp~f~~~~~~~  300 (338)
T cd07859         256 SQKFPN-ADPLALRLLERLLAFDPKDRPT----AEEALADPYFKGLAKVE  300 (338)
T ss_pred             HHhcCC-CChHHHHHHHHHcCcCcccCCC----HHHHhcCchhhhcCccc
Confidence            000111 2337899999999999999999    99999999999866643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-48  Score=368.54  Aligned_cols=257  Identities=25%  Similarity=0.383  Sum_probs=219.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|....+||.|+||.||+|.+..+++         .||+|++.-+.  .....+.++.|+.+|..++++||.++|+.+.
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k---------~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl   81 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKK---------VVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYL   81 (467)
T ss_pred             cccccchhccccccceeeeeeeccccc---------eEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhhee
Confidence            347777999999999999999998887         49999998763  4456678888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+..++++||||.||++.++++..  ..+.+..+.-++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+.
T Consensus        82 ~g~~LwiiMey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~  159 (467)
T KOG0201|consen   82 KGTKLWIIMEYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAG  159 (467)
T ss_pred             ecccHHHHHHHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceee
Confidence            999999999999999999998874  335888999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       ...+..+++||+.|||||++.
T Consensus       160 ql~~-------------------------------------------------------~~~rr~tfvGTPfwMAPEVI~  184 (467)
T KOG0201|consen  160 QLTN-------------------------------------------------------TVKRRKTFVGTPFWMAPEVIK  184 (467)
T ss_pred             eeec-------------------------------------------------------hhhccccccccccccchhhhc
Confidence            3211                                                       122335789999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..|+.++||||||++.+||.+|.+|+........+..|-+..++...    ..++..+++||..||++||+.||+    
T Consensus       185 ~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~----~~~S~~~kEFV~~CL~k~P~~Rps----  256 (467)
T KOG0201|consen  185 QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD----GDFSPPFKEFVEACLDKNPEFRPS----  256 (467)
T ss_pred             cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc----cccCHHHHHHHHHHhhcCcccCcC----
Confidence            889999999999999999999999999987774444333333222111    134447999999999999999999    


Q ss_pred             hHHHHcCCCcCCC
Q 013016          400 AADVKTHPFFKGL  412 (451)
Q Consensus       400 ~~ell~hp~~~~~  412 (451)
                      |.+||+|+|++..
T Consensus       257 A~~LLKh~FIk~a  269 (467)
T KOG0201|consen  257 AKELLKHKFIKRA  269 (467)
T ss_pred             HHHHhhhHHHHhc
Confidence            9999999999983

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.7e-47  Score=369.19  Aligned_cols=259  Identities=29%  Similarity=0.466  Sum_probs=230.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|..++++|.|+||.+++++++...+         .|++|.++-........ .....|+.++++++|||||.+.+.|+
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~---------~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~   73 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDK---------LYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFE   73 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCc---------eEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchh
Confidence            679999999999999999999887766         49999998776544433 35677999999999999999999999


Q ss_pred             eCCe-EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNF-SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~-~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +++. +||||+||+||+|.+.+...++..|+++.+..|+.||+.||.|||+++|+|||||+.||+++.++.|||+|||+|
T Consensus        74 ~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGla  153 (426)
T KOG0589|consen   74 EDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLA  153 (426)
T ss_pred             cCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhh
Confidence            9887 999999999999999999888888999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +..+...                                                       ....+.+||+.||+||++
T Consensus       154 K~l~~~~-------------------------------------------------------~~a~tvvGTp~YmcPEil  178 (426)
T KOG0589|consen  154 KILNPED-------------------------------------------------------SLASTVVGTPYYMCPEIL  178 (426)
T ss_pred             hhcCCch-------------------------------------------------------hhhheecCCCcccCHHHh
Confidence            7654321                                                       233456999999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+.+|+.++|||||||++|||++-+.+|...+......+|.+......    +..++.+++.+|..||..+|..||+   
T Consensus       179 ~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl----p~~ys~el~~lv~~~l~~~P~~RPs---  251 (426)
T KOG0589|consen  179 SDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL----PSMYSSELRSLVKSMLRKNPEHRPS---  251 (426)
T ss_pred             CCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC----CccccHHHHHHHHHHhhcCCccCCC---
Confidence            999999999999999999999999999999999999999998874322    2234458999999999999999999   


Q ss_pred             ChHHHHcCCCcCC
Q 013016          399 GAADVKTHPFFKG  411 (451)
Q Consensus       399 ~~~ell~hp~~~~  411 (451)
                       +.+||.+|.++.
T Consensus       252 -a~~LL~~P~l~~  263 (426)
T KOG0589|consen  252 -ALELLRRPHLLR  263 (426)
T ss_pred             -HHHHhhChhhhh
Confidence             999999999885

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-47  Score=356.42  Aligned_cols=258  Identities=29%  Similarity=0.459  Sum_probs=210.4

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|...+++|.|+||.||.|....+.+         .||||.+-.+.    ..   -.+|+++|+++.|||||++..+|..
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~---------~vAIKKv~~d~----r~---knrEl~im~~l~HpNIV~L~~~f~~   88 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEE---------EVAIKKVLQDK----RY---KNRELQIMRKLDHPNIVRLLYFFSS   88 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCc---------eeEEEEecCCC----Cc---CcHHHHHHHhcCCcCeeeEEEEEEe
Confidence            48889999999999999999988754         49999885432    22   2249999999999999999998854


Q ss_pred             CC-----eEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEE
Q 013016          161 SN-----FSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIML  232 (451)
Q Consensus       161 ~~-----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl  232 (451)
                      ..     +..+||||+ ..+|.++++..  .+..++.-.++-+..||++||.|||+.|||||||||+|||+|.+ |.+||
T Consensus        89 ~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKi  167 (364)
T KOG0658|consen   89 STESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKI  167 (364)
T ss_pred             cCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEe
Confidence            32     678999999 67898888742  34668999999999999999999999999999999999999976 99999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      ||||.|+......                                                        ...++..|+.|
T Consensus       168 cDFGSAK~L~~~e--------------------------------------------------------pniSYicSRyY  191 (364)
T KOG0658|consen  168 CDFGSAKVLVKGE--------------------------------------------------------PNISYICSRYY  191 (364)
T ss_pred             ccCCcceeeccCC--------------------------------------------------------CceeEEEeccc
Confidence            9999997543211                                                        11245778899


Q ss_pred             cCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-----------------C---CCC--
Q 013016          313 VSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-----------------P---TQS--  369 (451)
Q Consensus       313 ~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-----------------~---~~~--  369 (451)
                      +|||++.|.. |+.++||||.|||+.||+-|++.|.+.+..+.+..|.+-...+                 +   ...  
T Consensus       192 RaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~  271 (364)
T KOG0658|consen  192 RAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH  271 (364)
T ss_pred             cCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce
Confidence            9999999954 8999999999999999999999999998888877776521111                 0   111  


Q ss_pred             --CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 --PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 --~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                        .....+.++.+|+.++|..+|.+|.+    +.|+|.||||.++..+
T Consensus       272 ~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  272 KVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEALAHPFFDELRDP  315 (364)
T ss_pred             eecccCCCHHHHHHHHHHhccChhhcCC----HHHHhcchhhHHhhCc
Confidence              11223448999999999999999999    9999999999996554

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=7e-45  Score=353.08  Aligned_cols=300  Identities=34%  Similarity=0.594  Sum_probs=238.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||.||+|.++...+         .||+|.+.............+..|+.+++.++|+||+++++.+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~---------~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQ---------RFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE   71 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCc---------EEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe
Confidence            469999999999999999999887765         39999998765444445567778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++++|+||||++|++|.+++...  +.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~  149 (305)
T cd05609          72 TKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSK  149 (305)
T ss_pred             cCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCcc
Confidence            999999999999999999998765  458999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ............ .                                       ...............|+..|+|||.+.
T Consensus       150 ~~~~~~~~~~~~-~---------------------------------------~~~~~~~~~~~~~~~~~~~y~aPE~~~  189 (305)
T cd05609         150 IGLMSLTTNLYE-G---------------------------------------HIEKDTREFLDKQVCGTPEYIAPEVIL  189 (305)
T ss_pred             ccCcCccccccc-c---------------------------------------ccccchhhccccCCccCccccCchhcc
Confidence            321100000000 0                                       000000000111246788999999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|..||.+....+.+..+.......+....  ..+.++.+||.+||+.||++||+... 
T Consensus       190 ~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~-  266 (305)
T cd05609         190 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE--ALPADAQDLISRLLRQNPLERLGTGG-  266 (305)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccc--cCCHHHHHHHHHHhccChhhccCccC-
Confidence            888999999999999999999999999988777777777766554443322  34448999999999999999998532 


Q ss_pred             hHHHHcCCCcCCCCcccccccCCCCCCCCCCCCC
Q 013016          400 AADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKT  433 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~~  433 (451)
                      +.++|+||||.+.+++.......+.+|....+..
T Consensus       267 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (305)
T cd05609         267 AFEVKQHRFFLGLDWNGLLRQKAEFIPQLESEDD  300 (305)
T ss_pred             HHHHHhCccccCCCHHHHhhcCCCCCCCCCCccc
Confidence            7899999999999998776665666777755443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.3e-45  Score=367.63  Aligned_cols=265  Identities=25%  Similarity=0.367  Sum_probs=208.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.+.||.|+||.||+|...+...       +..||+|.+...        ....+|+.++++++|+||+++++++.
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~-------~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~  156 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQ-------RKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYR  156 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCcc-------ceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEe
Confidence            579999999999999999998654321       224999988643        12346999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+|||++ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus       157 ~~~~~~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~  233 (392)
T PHA03207        157 WKSTVCMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAAC  233 (392)
T ss_pred             eCCEEEEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccc
Confidence            999999999999 57888888443  569999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                     .......+.||+.|+|||++.
T Consensus       234 ~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~  260 (392)
T PHA03207        234 KLDAHP-----------------------------------------------------DTPQCYGWSGTLETNSPELLA  260 (392)
T ss_pred             ccCccc-----------------------------------------------------ccccccccccccCccCHhHhc
Confidence            321100                                                     001112347999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHhcC----CCCCCC-------------------------
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---ETTLRNIVKK----PLTFPT-------------------------  367 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~----~~~~~~-------------------------  367 (451)
                      +..++.++|||||||++|||++|+.||.+...   ...+..+...    ...++.                         
T Consensus       261 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (392)
T PHA03207        261 LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPP  340 (392)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccc
Confidence            98999999999999999999999999976432   2222222221    111110                         


Q ss_pred             CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccc
Q 013016          368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS  419 (451)
Q Consensus       368 ~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~  419 (451)
                      .......+.++.+||.+||..||.+||+    +.|+|.||||++.++..++.
T Consensus       341 ~~~~~~~~~~~~~li~~ml~~dp~~Rps----a~e~l~~p~f~~~~~~~~~~  388 (392)
T PHA03207        341 VIRKYGMHMDVEYLIAKMLTFDQEFRPS----AQDILSLPLFTKEPINLLNI  388 (392)
T ss_pred             hhhccCcchhHHHHHHHHhccChhhCCC----HHHHhhCchhhccchhhhcC
Confidence            0001122347889999999999999999    99999999999988776543

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-46  Score=365.25  Aligned_cols=249  Identities=24%  Similarity=0.340  Sum_probs=212.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.+.++++||+|.||.||+|.+++..+          ||+|.+....    ...+.+.+|+++|++|+|+|||+++++|.
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~----------vavk~ik~~~----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTK----------VAVKTIKEGS----MSPEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCc----------ccceEEeccc----cChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            447788999999999999999998875          9999997542    23355668999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++.+|||||||+.|+|.++|....+..+...+.+.++.||++|++||+++++|||||.+.||||+++..+||+|||+|+
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr  351 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLAR  351 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccc
Confidence            98899999999999999999998667789999999999999999999999999999999999999999999999999996


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ..........                                                      ..-.-...|.|||.+.
T Consensus       352 ~~~d~~Y~~~------------------------------------------------------~~~kfPIkWtAPEa~~  377 (468)
T KOG0197|consen  352 LIGDDEYTAS------------------------------------------------------EGGKFPIKWTAPEALN  377 (468)
T ss_pred             ccCCCceeec------------------------------------------------------CCCCCCceecCHHHHh
Confidence            3221111000                                                      0001245699999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+.++.++||||||++||||+| |+.||...++.+.+..+.++..-+..    ...+.++-++++.||..+|++|||   
T Consensus       378 ~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P----~~CP~~vY~lM~~CW~~~P~~RPt---  450 (468)
T KOG0197|consen  378 YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP----EGCPDEVYELMKSCWHEDPEDRPT---  450 (468)
T ss_pred             hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC----CCCCHHHHHHHHHHhhCCcccCCC---
Confidence            9999999999999999999999 99999999999999999988543222    224448999999999999999999   


Q ss_pred             ChHHHH
Q 013016          399 GAADVK  404 (451)
Q Consensus       399 ~~~ell  404 (451)
                       ++.+.
T Consensus       451 -F~~L~  455 (468)
T KOG0197|consen  451 -FETLR  455 (468)
T ss_pred             -HHHHH
Confidence             66543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-47  Score=365.55  Aligned_cols=294  Identities=35%  Similarity=0.624  Sum_probs=262.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ...+.+++++..||-|+||.|=++..+....         .+|+|++++....+.++.+.+..|..||...+.|.||++|
T Consensus       416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~---------~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLY  486 (732)
T KOG0614|consen  416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKA---------TFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLY  486 (732)
T ss_pred             ccchhhhhhhhhcccCccceEEEEEecccch---------HHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHH
Confidence            4456788889999999999999998876653         2899999999888888888889999999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      -.|.++++.|+.||-|-||.|+.++...  +.|....++.++..+++|++|||++|||+|||||+|++++.+|.+||.||
T Consensus       487 rTfrd~kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDF  564 (732)
T KOG0614|consen  487 RTFRDSKYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDF  564 (732)
T ss_pred             HHhccchhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeeh
Confidence            9999999999999999999999998876  66999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|+...                                                        ...++.+||||+.|.||
T Consensus       565 GFAKki~--------------------------------------------------------~g~KTwTFcGTpEYVAP  588 (732)
T KOG0614|consen  565 GFAKKIG--------------------------------------------------------SGRKTWTFCGTPEYVAP  588 (732)
T ss_pred             hhHHHhc--------------------------------------------------------cCCceeeecCCcccccc
Confidence            9996432                                                        23456689999999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |++++...+.++|.||||+++||||+|.+||.+.+....+..|+++.  ..+|.....     .+.+||+++..-+|.+|
T Consensus       589 EIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k-----~a~~Lik~LCr~~P~ER  663 (732)
T KOG0614|consen  589 EIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITK-----TATDLIKKLCRDNPTER  663 (732)
T ss_pred             hhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccch-----hHHHHHHHHHhcCcHhh
Confidence            99999999999999999999999999999999999999999999874  344443333     78999999999999999


Q ss_pred             CCC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCcc
Q 013016          394 LGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKI  441 (451)
Q Consensus       394 pt~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~  441 (451)
                      ... +.++.+|.+|.||.+++|..+  +.++||.+|.+..+..-.+++...
T Consensus       664 LG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p  714 (732)
T KOG0614|consen  664 LGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFP  714 (732)
T ss_pred             hccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCCC
Confidence            986 677999999999999999865  789999999999887766666543

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.7e-45  Score=356.63  Aligned_cols=262  Identities=25%  Similarity=0.385  Sum_probs=208.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|+++.+.+         .||+|++.....  ......+.+|+.++++++|+||+++++++.
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   74 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTEN---------LVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVH   74 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCC---------eEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEe
Confidence            679999999999999999999876655         499999875422  122234567999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+++.|+||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        75 ~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~  152 (309)
T cd07872          75 TDKSLTLVFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR  152 (309)
T ss_pred             eCCeEEEEEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccce
Confidence            9999999999995 5888877654 2458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|+..|+|||++.
T Consensus       153 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  177 (309)
T cd07872         153 AKSVPT-------------------------------------------------------KTYSNEVVTLWYRPPDVLL  177 (309)
T ss_pred             ecCCCc-------------------------------------------------------cccccccccccccCCHHHh
Confidence            221100                                                       0001125788999999987


Q ss_pred             C-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCCC------CCc
Q 013016          320 G-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQSP------SSM  373 (451)
Q Consensus       320 ~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~~------~~~  373 (451)
                      + ..++.++|||||||++|+|++|+.||...+..+.+..+......                   ++....      ...
T Consensus       178 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (309)
T cd07872         178 GSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPR  257 (309)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccC
Confidence            6 45789999999999999999999999887665554444332110                   111000      011


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      .+.++++||.+||+.||.+|||    +.|+|+||||+.+.
T Consensus       258 ~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~~~~  293 (309)
T cd07872         258 LDTEGIELLTKFLQYESKKRIS----AEEAMKHAYFRSLG  293 (309)
T ss_pred             CCHHHHHHHHHhccCChhhCCC----HHHHhcChhhhhcc
Confidence            2347899999999999999999    99999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=7.1e-45  Score=361.89  Aligned_cols=259  Identities=25%  Similarity=0.375  Sum_probs=206.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+....+.         ||||++..... .......+.+|+.+++.++|+||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~---------vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~   92 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVF   92 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcE---------EEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceee
Confidence            37899999999999999999998776653         99999975422 223345566799999999999999999987


Q ss_pred             EeC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EAS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...      ...|+||||+. ++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  167 (364)
T cd07875          93 TPQKSLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  167 (364)
T ss_pred             cccccccccCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEE
Confidence            543      36799999994 577776643    3889999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||..|
T Consensus       168 ~DfG~a~~~~~~--------------------------------------------------------~~~~~~~~t~~y  191 (364)
T cd07875         168 LDFGLARTAGTS--------------------------------------------------------FMMTPYVVTRYY  191 (364)
T ss_pred             EeCCCccccCCC--------------------------------------------------------CcccCCcccCCc
Confidence            999998432110                                                        001123688999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC----------------------CC---
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF----------------------PT---  367 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----------------------~~---  367 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||...+..+.+..++......                      ..   
T Consensus       192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (364)
T cd07875         192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  271 (364)
T ss_pred             CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCCh
Confidence            99999999999999999999999999999999998877666555554321110                      00   


Q ss_pred             ------------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          368 ------------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       368 ------------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                  .......+.++++||.+||+.||.+|||    +.|+|+||||+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t----~~e~L~hp~~~~~  324 (364)
T cd07875         272 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS----VDEALQHPYINVW  324 (364)
T ss_pred             HhhCccccccccccccccccHHHHHHHHHhcCcCcccCCC----HHHHhcCcccccc
Confidence                        0001112347899999999999999999    9999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=8.7e-45  Score=360.56  Aligned_cols=258  Identities=25%  Similarity=0.389  Sum_probs=203.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.+..+++         .||||++..... .......+.+|+.+++.++|+||+++++++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   89 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGI---------NVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVF   89 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCc---------eeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence            3789999999999999999999877655         499999975422 223345667799999999999999999998


Q ss_pred             EeCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...+      ..|+||||+. ++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl  164 (359)
T cd07876          90 TPQKSLEEFQDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  164 (359)
T ss_pred             ccCCCccccceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEE
Confidence            6543      5799999995 566665543    3889999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||+.|
T Consensus       165 ~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~~t~~y  188 (359)
T cd07876         165 LDFGLARTACTN--------------------------------------------------------FMMTPYVVTRYY  188 (359)
T ss_pred             ecCCCccccccC--------------------------------------------------------ccCCCCcccCCC
Confidence            999997421100                                                        001123688999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC----------------------CCCCCCC--
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK----------------------PLTFPTQ--  368 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~----------------------~~~~~~~--  368 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||...+....+..+...                      ....+..  
T Consensus       189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (359)
T cd07876         189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISF  268 (359)
T ss_pred             CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcch
Confidence            9999999999999999999999999999999999876554433222211                      1111000  


Q ss_pred             -------------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          369 -------------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       369 -------------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                                   ......+.++++||.+||+.||++|||    +.|+|+||||+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l~hp~~~~  320 (359)
T cd07876         269 EELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRIS----VDEALRHPYITV  320 (359)
T ss_pred             hhhccccccccccccccccchhHHHHHHHHhccCcccCCC----HHHHhcCchhhh
Confidence                         001122347899999999999999999    999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-46  Score=364.85  Aligned_cols=260  Identities=23%  Similarity=0.340  Sum_probs=218.8

Q ss_pred             CCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccc
Q 013016           74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        74 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      .+.+.+++..+...||+|.||+||+|.|.++            ||||+++-.... .++.+.|.+|+.++++-+|.||+-
T Consensus       386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd------------VAVK~Lnv~~pt-~~qlqaFKnEVa~lkkTRH~NIlL  452 (678)
T KOG0193|consen  386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHGD------------VAVKLLNVDDPT-PEQLQAFKNEVAVLKKTRHENILL  452 (678)
T ss_pred             ccccCHHHhhccceeccccccceeecccccc------------eEEEEEecCCCC-HHHHHHHHHHHHHHhhcchhhhee
Confidence            3445567888999999999999999999987            999999876544 458899999999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +.|+|..+++ .||+-+|+|.+|+.+++... .+|.....+.|++||+.|+.|||.++|||||||..||++.++++|||+
T Consensus       453 FMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIg  530 (678)
T KOG0193|consen  453 FMGACMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIG  530 (678)
T ss_pred             eehhhcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEe
Confidence            9999999887 99999999999999998775 569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++..-.                       +            +.+                  ...-..-.|...||
T Consensus       531 DFGLatvk~-----------------------~------------w~g------------------~~q~~qp~gsilwm  557 (678)
T KOG0193|consen  531 DFGLATVKT-----------------------R------------WSG------------------EQQLEQPHGSLLWM  557 (678)
T ss_pred             cccceeeee-----------------------e------------ecc------------------ccccCCCccchhhh
Confidence            999973210                       0            000                  00011225778899


Q ss_pred             CcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aPE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |||+++.   .+|+..+||||||||+|||++|..||...+.+.++-.+-++.+...........+.++++|+..||.+++
T Consensus       558 APEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~  637 (678)
T KOG0193|consen  558 APEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDR  637 (678)
T ss_pred             cHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCc
Confidence            9999864   5689999999999999999999999997777777766666655554444455566689999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      ++||.    +.+||.
T Consensus       638 ~eRP~----F~~il~  648 (678)
T KOG0193|consen  638 EERPL----FPQLLS  648 (678)
T ss_pred             ccCcc----HHHHHH
Confidence            99999    777774

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-45  Score=372.09  Aligned_cols=259  Identities=28%  Similarity=0.414  Sum_probs=203.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.+..+++         .||||++....       ....+|+.+++.++|+||+++++++.
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~---------~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~  129 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSE---------KVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYY  129 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCC---------EEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEe
Confidence            679999999999999999999877655         49999886431       12235899999999999999998874


Q ss_pred             eC--------CeEEEEEeeccCCchhhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-
Q 013016          160 AS--------NFSCIVMEFCSGGDLHSLRHK--QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-  228 (451)
Q Consensus       160 ~~--------~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-  228 (451)
                      ..        .++++||||++ ++|.+++..  .....+++..++.++.||+.||+|||++||+||||||+|||++.++ 
T Consensus       130 ~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~  208 (440)
T PTZ00036        130 TECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH  208 (440)
T ss_pred             ecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCC
Confidence            32        25789999995 577776653  2345699999999999999999999999999999999999999665 


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||+|.....                                                        ........|
T Consensus       209 ~vkL~DFGla~~~~~--------------------------------------------------------~~~~~~~~~  232 (440)
T PTZ00036        209 TLKLCDFGSAKNLLA--------------------------------------------------------GQRSVSYIC  232 (440)
T ss_pred             ceeeeccccchhccC--------------------------------------------------------CCCcccCCC
Confidence            799999999853210                                                        001112468


Q ss_pred             CCCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-----------------CCCCC-
Q 013016          309 THEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-----------------FPTQS-  369 (451)
Q Consensus       309 t~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----------------~~~~~-  369 (451)
                      |+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+.+..+......                 ++... 
T Consensus       233 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  312 (440)
T PTZ00036        233 SRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKP  312 (440)
T ss_pred             CcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCc
Confidence            9999999998774 5899999999999999999999999988776666655432111                 11100 


Q ss_pred             ------CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 ------PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                            .+...+.++++||.+||++||.+|||    +.|+|.||||+++...
T Consensus       313 ~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t----a~e~l~hp~f~~~~~~  360 (440)
T PTZ00036        313 KDLKKVFPKGTPDDAINFISQFLKYEPLKRLN----PIEALADPFFDDLRDP  360 (440)
T ss_pred             hhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhCChhHHhhhcc
Confidence                  01112348999999999999999999    9999999999986553

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-46  Score=368.86  Aligned_cols=260  Identities=29%  Similarity=0.427  Sum_probs=224.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      -|.|+..||.|+||+||+|..+.+.         .+-|.|+|.-.   .....+.+..|++||..+.||+||++++.|..
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~---------~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~  100 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETK---------LLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYF  100 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccch---------hhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhc
Confidence            4899999999999999999877554         35788888643   45667888889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ++.++|+.|||.||-+..++-.. +..+.+.++.-+++|++.||.|||+++|||||||..|||++.+|.++|+|||.+-.
T Consensus       101 enkLwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAK  179 (1187)
T KOG0579|consen  101 ENKLWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAK  179 (1187)
T ss_pred             cCceEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccccccc
Confidence            99999999999999998876655 35599999999999999999999999999999999999999999999999998621


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                                                                             ......+..+|.|||.|||||++..
T Consensus       180 -------------------------------------------------------n~~t~qkRDsFIGTPYWMAPEVvmC  204 (1187)
T KOG0579|consen  180 -------------------------------------------------------NKSTRQKRDSFIGTPYWMAPEVVMC  204 (1187)
T ss_pred             -------------------------------------------------------chhHHhhhccccCCcccccchheee
Confidence                                                                   1122344557899999999999754


Q ss_pred             -----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          321 -----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       321 -----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                           .+|+.++||||||++|.||..+.+|-...+...++.+|....+  |....+..++..+.+|+++||.+||..||+
T Consensus       205 ET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSeP--PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~  282 (1187)
T KOG0579|consen  205 ETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--PTLLQPSHWSRSFSDFLKRCLVKNPRNRPP  282 (1187)
T ss_pred             ccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCC--CcccCcchhhhHHHHHHHHHHhcCCccCCC
Confidence                 5789999999999999999999999999999888888877643  344445556669999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCCc
Q 013016          396 SKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~  414 (451)
                          +.+||+||||++++.
T Consensus       283 ----aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  283 ----AAQLLKHPFVQNAPS  297 (1187)
T ss_pred             ----HHHHhhCcccccCCc
Confidence                999999999997654

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=8e-45  Score=357.07  Aligned_cols=259  Identities=29%  Similarity=0.410  Sum_probs=208.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||.|+||.||+|.++.++.         .+|+|++....  .......+.+|+++++.++|+||++++++|.
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   73 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGL---------IMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY   73 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCc---------EEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEE
Confidence            789999999999999999999886655         49999887542  2233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+++|+||||++|++|.+++...  +.+++..+..++.||+.||.|||++ +|+|+||||+|||++.++.+||+|||++
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~  151 (333)
T cd06650          74 SDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  151 (333)
T ss_pred             ECCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence            999999999999999999998764  4589999999999999999999975 7999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                         .......|+..|+|||++
T Consensus       152 ~~~~~---------------------------------------------------------~~~~~~~~~~~y~aPE~~  174 (333)
T cd06650         152 GQLID---------------------------------------------------------SMANSFVGTRSYMSPERL  174 (333)
T ss_pred             hhhhh---------------------------------------------------------hccccCCCCccccCHHHh
Confidence            42110                                                         001123688999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCC--------------------------------
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---KPL--------------------------------  363 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~---~~~--------------------------------  363 (451)
                      .+..++.++|||||||++|+|++|+.||...........+..   +..                                
T Consensus       175 ~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (333)
T cd06650         175 QGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFEL  254 (333)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHH
Confidence            998899999999999999999999999986544332211100   000                                


Q ss_pred             ------CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          364 ------TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       364 ------~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                            ..+........+.++++||.+||++||++|||    +.|++.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt----~~ell~h~~~~~~  305 (333)
T cd06650         255 LDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERAD----LKQLMVHAFIKRS  305 (333)
T ss_pred             HHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcC----HHHHhhCHHHhcC
Confidence                  00000011123447899999999999999999    9999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.5e-44  Score=358.39  Aligned_cols=259  Identities=25%  Similarity=0.395  Sum_probs=203.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+....+         .||||++..... .......+.+|+.+++.++|+||+++++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   85 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDR---------NVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVF   85 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCc---------eEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeee
Confidence            3789999999999999999999876655         399999875422 223345566799999999999999999988


Q ss_pred             EeC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EAS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...      ...|+||||+. ++|.+.+..    .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl  160 (355)
T cd07874          86 TPQKSLEEFQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  160 (355)
T ss_pred             eccccccccceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEE
Confidence            643      35799999995 567666643    3889999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||+.|
T Consensus       161 ~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y  184 (355)
T cd07874         161 LDFGLARTAGTS--------------------------------------------------------FMMTPYVVTRYY  184 (355)
T ss_pred             eeCcccccCCCc--------------------------------------------------------cccCCccccCCc
Confidence            999998422110                                                        001123689999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC----------------------CC-----C
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP----------------------LT-----F  365 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~----------------------~~-----~  365 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||.+....+.+..+....                      ..     +
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T cd07874         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccc
Confidence            99999999889999999999999999999999998766544333322210                      00     0


Q ss_pred             CC----------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          366 PT----------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       366 ~~----------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      +.          .......+.++++||.+||..||++|||    +.|+|+||||+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps----~~ell~hp~~~~~  317 (355)
T cd07874         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS----VDEALQHPYINVW  317 (355)
T ss_pred             hhhccccccccccccccccchHHHHHHHHHhcCCchhcCC----HHHHhcCcchhcc
Confidence            00          0011112347899999999999999999    9999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.4e-44  Score=356.14  Aligned_cols=260  Identities=18%  Similarity=0.285  Sum_probs=201.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|++.++||.|+||.||+|.+....+.    ..+..||||++....  .......+..|+.++..+ +||||++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   79 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKK----SSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA   79 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCc----ccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence            36899999999999999999986433211    122359999997542  223345677899999999 89999999998


Q ss_pred             EEeC-CeEEEEEeeccCCchhhhhhhCC----------------------------------------------------
Q 013016          158 FEAS-NFSCIVMEFCSGGDLHSLRHKQP----------------------------------------------------  184 (451)
Q Consensus       158 ~~~~-~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------  184 (451)
                      +... +.+++||||++||+|.+++....                                                    
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T cd05102          80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP  159 (338)
T ss_pred             ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence            8764 46899999999999999887532                                                    


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCC
Q 013016          185 --------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA  256 (451)
Q Consensus       185 --------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~  256 (451)
                              ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......           
T Consensus       160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~-----------  228 (338)
T cd05102         160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-----------  228 (338)
T ss_pred             chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCc-----------
Confidence                    1347888999999999999999999999999999999999999999999999984321000           


Q ss_pred             CCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHH
Q 013016          257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI  336 (451)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il  336 (451)
                                                                .........++..|+|||++.+..++.++|||||||++
T Consensus       229 ------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  266 (338)
T cd05102         229 ------------------------------------------DYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL  266 (338)
T ss_pred             ------------------------------------------chhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH
Confidence                                                      00011123466789999999998899999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHH-HHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          337 YEMIY-GRTPFAAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       337 ~ellt-g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      |||++ |..||......+.+ ..+..+....    .+...+..+.+|+.+||+.||.+||+    +.||++
T Consensus       267 ~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~RPs----~~el~~  329 (338)
T cd05102         267 WEIFSLGASPYPGVQINEEFCQRLKDGTRMR----APENATPEIYRIMLACWQGDPKERPT----FSALVE  329 (338)
T ss_pred             HHHHhCCCCCCCCCCccHHHHHHHhcCCCCC----CCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            99997 99999876544433 3333332211    11223448999999999999999999    888874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.1e-44  Score=348.25  Aligned_cols=257  Identities=28%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYAE  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~~  157 (451)
                      +|++.+.||+|+||+||+|.++.+++         .||+|++...... .........|+.+++.+   +|+||++++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~---------~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~   70 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGH---------FVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDV   70 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCc---------EEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeee
Confidence            48999999999999999999987765         4999998754211 11112233466666554   79999999998


Q ss_pred             EEe-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          158 FEA-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       158 ~~~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      +..     ....++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        71 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl  149 (288)
T cd07863          71 CATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKL  149 (288)
T ss_pred             eccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            864     346899999995 58988887765566999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||..|
T Consensus       150 ~dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  173 (288)
T cd07863         150 ADFGLARIYSCQ--------------------------------------------------------MALTPVVVTLWY  173 (288)
T ss_pred             CccCccccccCc--------------------------------------------------------ccCCCccccccc
Confidence            999997432110                                                        000123678899


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-----CCC------------------CC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-----FPT------------------QS  369 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----~~~------------------~~  369 (451)
                      +|||++.+..++.++|||||||++|+|++|++||......+.+.++......     ++.                  ..
T Consensus       174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T cd07863         174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSV  253 (288)
T ss_pred             cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHh
Confidence            9999999988999999999999999999999999887766655555431100     000                  00


Q ss_pred             CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       370 ~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+ ..+..+.+||.+||++||++|||    +.|++.||||
T Consensus       254 ~~-~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp~f  288 (288)
T cd07863         254 VP-EIEESGAQLLLEMLTFNPHKRIS----AFRALQHPFF  288 (288)
T ss_pred             Cc-CcCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence            01 12337899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.7e-44  Score=370.95  Aligned_cols=259  Identities=22%  Similarity=0.347  Sum_probs=215.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccc-cccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNK-YRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~-~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..|.+.+.||.|++|.||+|....+ .+         .||+|.+....   ......+..|+.+++.++|||||++++++
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~---------~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~  134 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKE---------KVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDF  134 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCe---------EEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            4599999999999999999987665 32         38888775432   23334566799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ..++++||||||++||+|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       135 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFg  214 (478)
T PTZ00267        135 KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFG  214 (478)
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCc
Confidence            9999999999999999999887642  23568999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.......                                                     .......++||+.|+|||
T Consensus       215 la~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE  241 (478)
T PTZ00267        215 FSKQYSDSV-----------------------------------------------------SLDVASSFCGTPYYLAPE  241 (478)
T ss_pred             CceecCCcc-----------------------------------------------------ccccccccCCCccccCHh
Confidence            985321100                                                     001122357999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++|||||||++|+|++|+.||......+.+..+..+.....    +...+.++.+||.+||+.||++||+ 
T Consensus       242 ~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~~li~~~L~~dP~~Rps-  316 (478)
T PTZ00267        242 LWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF----PCPVSSGMKALLDPLLSKNPALRPT-  316 (478)
T ss_pred             HhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CccCCHHHHHHHHHHhccChhhCcC-
Confidence            99998899999999999999999999999998888887877776544311    1123348999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.+++.|+|++.
T Consensus       317 ---~~~~l~~~~~~~  328 (478)
T PTZ00267        317 ---TQQLLHTEFLKY  328 (478)
T ss_pred             ---HHHHHhCHHHHH
Confidence               999999999975

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.2e-44  Score=359.33  Aligned_cols=263  Identities=27%  Similarity=0.377  Sum_probs=207.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||+|+||.||+|.+..+++         .||||++.... ........+.+|+.+++.++|+||+++++++..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   70 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGK---------RVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQP   70 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCC---------EEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecC
Confidence            47889999999999999999876655         39999986432 122334567789999999999999999999987


Q ss_pred             CC-----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          161 SN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       161 ~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      .+     +.|+||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        71 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Df  147 (372)
T cd07853          71 PHIDPFEEIYVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDF  147 (372)
T ss_pred             CCccccceEEEEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccc
Confidence            76     899999999 46788777553  56999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.......                                                      ........|++.|+||
T Consensus       148 g~a~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aP  173 (372)
T cd07853         148 GLARVEEPDE------------------------------------------------------SKHMTQEVVTQYYRAP  173 (372)
T ss_pred             cceeecccCc------------------------------------------------------cccCCCCCcCCCcCCH
Confidence            9984321100                                                      0001123678899999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-----------------------CCCCCCC---
Q 013016          316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK-----------------------PLTFPTQ---  368 (451)
Q Consensus       316 E~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-----------------------~~~~~~~---  368 (451)
                      |++.+. .++.++|||||||++|||++|+.||.+.+....+..+...                       ....+..   
T Consensus       174 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (372)
T cd07853         174 EILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL  253 (372)
T ss_pred             HHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHh
Confidence            999874 4789999999999999999999999887666554444321                       1111100   


Q ss_pred             -CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          369 -SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       369 -~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                       ......+.++.+||.+||+.||.+|||    +.|+|+||||++..+
T Consensus       254 ~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l~hp~~~~~~~  296 (372)
T cd07853         254 YTLSSQATHEAVHLLCRMLVFDPDKRIS----AADALAHPYLDEGRL  296 (372)
T ss_pred             cccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHhcCHhhCCCcc
Confidence             001112448899999999999999999    999999999998543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=3.1e-44  Score=347.81  Aligned_cols=264  Identities=25%  Similarity=0.376  Sum_probs=208.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|.+.++||.|+||.||+|.++.+.+         .||+|.+.....  ......+..|+.+++.++|+||+++++++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~   73 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDN---------LVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDII   73 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCc---------EEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEE
Confidence            4789999999999999999999876655         499999864421  12233456799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..|+||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus        74 ~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  151 (301)
T cd07873          74 HTEKSLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLA  151 (301)
T ss_pred             ecCCeEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcch
Confidence            99999999999995 6898887654 345899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......+++.|+|||++
T Consensus       152 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~~  176 (301)
T cd07873         152 RAKSIPT-------------------------------------------------------KTYSNEVVTLWYRPPDIL  176 (301)
T ss_pred             hccCCCC-------------------------------------------------------CcccccceeecccCcHHH
Confidence            4221000                                                       000112567889999998


Q ss_pred             cCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCC------CCC
Q 013016          319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQS------PSS  372 (451)
Q Consensus       319 ~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~------~~~  372 (451)
                      .+. .++.++|||||||++|+|++|+.||...+..+.+..+......                   .+...      ...
T Consensus       177 ~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (301)
T cd07873         177 LGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAP  256 (301)
T ss_pred             hCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcC
Confidence            764 4788999999999999999999999887665554443321111                   01000      001


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      ..+.++.+||.+||+.||.+|||    +.|+|+||||+.+..
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~f~~~~~  294 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPYFHCLGE  294 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcC----HHHHhcCcccccccc
Confidence            22347899999999999999999    999999999998663

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3.5e-44  Score=343.22  Aligned_cols=273  Identities=37%  Similarity=0.615  Sum_probs=215.9

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||+|+||+||+|.++.+++         .||+|++.+...........+..|++++++++|+||+++++.+...+..|+|
T Consensus         1 lg~g~~g~vy~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   71 (277)
T cd05577           1 LGKGGFGEVCACQVKATGK---------MYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLV   71 (277)
T ss_pred             CCCCCceeEEEEEEcCCCc---------EEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEE
Confidence            6999999999999887665         4999999876544444455566799999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||+++++|.+++.......+++..++.++.|++.||.|||++|++||||+|+||+++.++.++|+|||++......   
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---  148 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---  148 (277)
T ss_pred             EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---
Confidence            99999999999988765557999999999999999999999999999999999999999999999999987422100   


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                                                                           .......|+..|+|||.+.+..++.++
T Consensus       149 -----------------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~  175 (277)
T cd05577         149 -----------------------------------------------------KKIKGRAGTPGYMAPEVLQGEVYDFSV  175 (277)
T ss_pred             -----------------------------------------------------CccccccCCCCcCCHHHhcCCCCCchh
Confidence                                                                 000112577789999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC-ChHHHHcC
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GAADVKTH  406 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~-~~~ell~h  406 (451)
                      |||||||++|+|++|+.||...........+.......+...... .+.++.++|.+||+.||.+||+.++ .+.+++.|
T Consensus       176 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         176 DWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK-FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             hhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCcc-CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            999999999999999999987544222222222222222222222 3448999999999999999995433 49999999


Q ss_pred             CCcCCCCcccc--cccCCCCCC
Q 013016          407 PFFKGLNFALI--RSLTPPEIP  426 (451)
Q Consensus       407 p~~~~~~~~~~--~~~~~~~~p  426 (451)
                      |||..++|...  ....+|++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd05577         255 PLFKDLNWRRLEAGMLEPPFIP  276 (277)
T ss_pred             hhhhcCChhhhhcCCCCCCCCC
Confidence            99999999755  333444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=9.3e-44  Score=378.14  Aligned_cols=152  Identities=41%  Similarity=0.660  Sum_probs=137.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|.+.++||+|+||+||+|.+...++         .||||++.............+..|+.+++.++|+||+++++++
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---------~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~   73 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSK---------LYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL   73 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCc---------EEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE
Confidence            4789999999999999999999886655         4999999865544445556778899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+++||||||+.|++|.+++...  +.+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||++
T Consensus        74 ~~~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls  151 (669)
T cd05610          74 QSANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLS  151 (669)
T ss_pred             EECCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence            9999999999999999999998764  45899999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q 013016          239 LCS  241 (451)
Q Consensus       239 ~~~  241 (451)
                      +..
T Consensus       152 ~~~  154 (669)
T cd05610         152 KVT  154 (669)
T ss_pred             ccc
Confidence            754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-43  Score=359.95  Aligned_cols=255  Identities=25%  Similarity=0.371  Sum_probs=199.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|.+.+.||.|+||.||+|.+....+         .||||....         ..+.+|+.++++++|+|||++++++.
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~---------~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~  230 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQ---------RVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRV  230 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCC---------EEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEE
Confidence            469999999999999999999887665         399996432         22346999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+|||++ .++|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||++.
T Consensus       231 ~~~~~~lv~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~  308 (461)
T PHA03211        231 VGGLTCLVLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAAC  308 (461)
T ss_pred             ECCEEEEEEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCce
Confidence            999999999999 578888876543 369999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                     .......+.||..|+|||++.
T Consensus       309 ~~~~~~-----------------------------------------------------~~~~~~~~~GT~~Y~APE~~~  335 (461)
T PHA03211        309 FARGSW-----------------------------------------------------STPFHYGIAGTVDTNAPEVLA  335 (461)
T ss_pred             eccccc-----------------------------------------------------ccccccccCCCcCCcCHHHHc
Confidence            321100                                                     000111347999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCCC---CCCC---------------------
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS--------NETTLRNIVKKPL---TFPT---------------------  367 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~---~~~~---------------------  367 (451)
                      +..++.++|||||||+||||++|..++....        .......+.....   .++.                     
T Consensus       336 ~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  415 (461)
T PHA03211        336 GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPA  415 (461)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCc
Confidence            9999999999999999999999876553321        1222222222111   0110                     


Q ss_pred             ---CCCC--CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          368 ---QSPS--SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       368 ---~~~~--~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                         ..+.  ...+.++.+||.+||++||.+|||    +.|||+||||+.
T Consensus       416 ~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs----a~elL~hp~f~~  460 (461)
T PHA03211        416 YTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS----AAELLRLPLFQS  460 (461)
T ss_pred             cCCcchhhhccccchHHHHHHHHcccChhhCcC----HHHHhhCcccCC
Confidence               0000  011237899999999999999999    999999999985

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.7e-44  Score=354.32  Aligned_cols=253  Identities=21%  Similarity=0.379  Sum_probs=197.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.+.||+|+||.||+|.+....+         .||+|+..+..         ...|+.++++++|+||+++++++.
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~  127 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPD---------PVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLV  127 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCc---------eEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEE
Confidence            569999999999999999999887655         39999865331         234889999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+|||++ .++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       128 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~  205 (357)
T PHA03209        128 SGAITCMVLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQ  205 (357)
T ss_pred             eCCeeEEEEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccc
Confidence            999999999999 67888887654 3569999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                        .......||..|+|||++.
T Consensus       206 ~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~~  229 (357)
T PHA03209        206 FPVVA--------------------------------------------------------PAFLGLAGTVETNAPEVLA  229 (357)
T ss_pred             ccccC--------------------------------------------------------cccccccccccccCCeecC
Confidence            21100                                                        0011246899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCC-CCCCCh---------HHHHHHHhcCCCCCCCCCC-------------------
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTP-FAAPSN---------ETTLRNIVKKPLTFPTQSP-------------------  370 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~p-f~~~~~---------~~~~~~i~~~~~~~~~~~~-------------------  370 (451)
                      +..++.++|||||||++|||+++..+ |.....         ...+..++......+....                   
T Consensus       230 ~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (357)
T PHA03209        230 RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLER  309 (357)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCC
Confidence            98999999999999999999985444 443211         1122222221110000000                   


Q ss_pred             ----------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          371 ----------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       371 ----------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                ....+.++.+||.+||++||.+|||    +.|||+||||+++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt----a~e~l~hp~f~~~  357 (357)
T PHA03209        310 QPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS----AEEILNYPMFAQL  357 (357)
T ss_pred             CcccccHHHhccCCCchHHHHHHHHHcCCcccCcC----HHHHhcCchhccC
Confidence                      0012236678999999999999999    9999999999874

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.2e-43  Score=334.68  Aligned_cols=256  Identities=26%  Similarity=0.429  Sum_probs=216.4

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||+|++|.||+|.++.+++         .|++|.+...... ......+..|+.+++.++|+||+++++++..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   70 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKR---------VYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLD   70 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCc---------EEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeecc
Confidence            58899999999999999999887665         3999998754322 3344567789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..|+||||++|++|.+++.......+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~  150 (256)
T cd08529          71 KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKL  150 (256)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEccccccee
Confidence            99999999999999999999876566799999999999999999999999999999999999999999999999998743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                       .......|+..|+|||++.+
T Consensus       151 ~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd08529         151 LSDNT-------------------------------------------------------NFANTIVGTPYYLSPELCED  175 (256)
T ss_pred             ccCcc-------------------------------------------------------chhhccccCccccCHHHhcC
Confidence            22100                                                       00112367888999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++|||||||++|+|++|+.||...........+..+.......    ..+..+.+++.+||+.+|++||+    +
T Consensus       176 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~----~  247 (256)
T cd08529         176 KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ----MYSQQLAQLIDQCLTKDYRQRPD----T  247 (256)
T ss_pred             CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc----ccCHHHHHHHHHHccCCcccCcC----H
Confidence            889999999999999999999999999888777777766654322211    23448999999999999999999    9


Q ss_pred             HHHHcCCCc
Q 013016          401 ADVKTHPFF  409 (451)
Q Consensus       401 ~ell~hp~~  409 (451)
                      .++++|||+
T Consensus       248 ~~ll~~~~~  256 (256)
T cd08529         248 FQLLRNPSL  256 (256)
T ss_pred             HHHhhCCCC
Confidence            999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.4e-44  Score=355.12  Aligned_cols=258  Identities=26%  Similarity=0.389  Sum_probs=205.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||+||+|.+..+++         .||||++..... .......+.+|+.+++.++|+||+++++++.
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   84 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQ---------KVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFT   84 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCC---------EEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhc
Confidence            679999999999999999999877665         499999975432 2233455667999999999999999999885


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..      ...|+++|++ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        85 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~  160 (343)
T cd07878          85 PATSIENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRIL  160 (343)
T ss_pred             ccccccccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEc
Confidence            43      4679999998 8899887754   459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......||+.|+
T Consensus       161 Dfg~~~~~~~----------------------------------------------------------~~~~~~~t~~y~  182 (343)
T cd07878         161 DFGLARQADD----------------------------------------------------------EMTGYVATRWYR  182 (343)
T ss_pred             CCccceecCC----------------------------------------------------------CcCCcccccccc
Confidence            9999742210                                                          011236899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-----------------------CCCC
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-----------------------PTQS  369 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-----------------------~~~~  369 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||......+.+..+.......                       +...
T Consensus       183 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (343)
T cd07878         183 APEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQD  262 (343)
T ss_pred             CchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchh
Confidence            9999977 468999999999999999999999998766555444443211100                       0000


Q ss_pred             ----CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          370 ----PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       370 ----~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                          ... .+..+.+||.+||..||.+|||    +.|+|.||||.+...
T Consensus       263 ~~~~~~~-~~~~~~~li~~mL~~dp~~R~s----~~ell~hp~~~~~~~  306 (343)
T cd07878         263 LKKIFRG-ANPLAIDLLEKMLVLDSDKRIS----ASEALAHPYFSQYHD  306 (343)
T ss_pred             HHHhccC-CCHHHHHHHHHHcCCChhhCCC----HHHHhcCcchhccCC
Confidence                001 1236789999999999999999    999999999998443

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.4e-44  Score=369.37  Aligned_cols=261  Identities=24%  Similarity=0.383  Sum_probs=215.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||++..... .......+..|+.++..++|+||+++++.+.
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~---------~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~  101 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGE---------PFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFA  101 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCC---------EEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence            689999999999999999999877665         499999975532 2234456777999999999999999988775


Q ss_pred             eCC--------eEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC
Q 013016          160 ASN--------FSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       160 ~~~--------~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~  229 (451)
                      ..+        .+++||||+++|+|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus       102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~  181 (496)
T PTZ00283        102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL  181 (496)
T ss_pred             cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC
Confidence            432        478999999999999988653  2356899999999999999999999999999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||+++......                                                     ........+||
T Consensus       182 vkL~DFGls~~~~~~~-----------------------------------------------------~~~~~~~~~Gt  208 (496)
T PTZ00283        182 VKLGDFGFSKMYAATV-----------------------------------------------------SDDVGRTFCGT  208 (496)
T ss_pred             EEEEecccCeeccccc-----------------------------------------------------cccccccccCC
Confidence            9999999985321100                                                     00111235799


Q ss_pred             CCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       310 ~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      +.|+|||++.+..++.++|||||||++|||++|+.||......+.+..+..+.....   + ...+.++.+|+.+||+.|
T Consensus       209 ~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~li~~~L~~d  284 (496)
T PTZ00283        209 PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL---P-PSISPEMQEIVTALLSSD  284 (496)
T ss_pred             cceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC---C-CCCCHHHHHHHHHHcccC
Confidence            999999999998999999999999999999999999998887777777776543221   1 123348999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCC
Q 013016          390 PCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      |.+||+    +.++++|||++.
T Consensus       285 P~~RPs----~~ell~~p~~~~  302 (496)
T PTZ00283        285 PKRRPS----SSKLLNMPICKL  302 (496)
T ss_pred             hhhCcC----HHHHHhCHHHHH
Confidence            999999    999999999886

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-44  Score=355.11  Aligned_cols=317  Identities=32%  Similarity=0.504  Sum_probs=244.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      -|..++.||-|+||.|.+++..++..         +||+|.+++.......++..+..|..||..-..+-||+||-.|.+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~---------lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD  700 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRA---------LYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD  700 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhh---------HHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc
Confidence            38889999999999999999777644         799999999988888888888889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+.+|+||+|++||++-.+|-+.  +-|++..++.++.++..|+++.|..|+|||||||+|||||.+|.+||+|||+|.=
T Consensus       701 kdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  701 KDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  778 (1034)
T ss_pred             CCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccc
Confidence            99999999999999998877664  6699999999999999999999999999999999999999999999999999842


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccc--hhhhhhhccccCCccccccCCCcccc-----cccccccccccccCCCcc
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYS--TRLSRFLNRFFGSKKIQTLTPNRLFV-----AEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gt~~y~  313 (451)
                      +.              ++-.++.|....+  ....+....      ..+..++....     ..-.....-..+||+.|+
T Consensus       779 fR--------------WTHdskYYq~gdH~RqDSmep~~e------~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyi  838 (1034)
T KOG0608|consen  779 FR--------------WTHDSKYYQEGDHHRQDSMEPSPE------WADISKCLKVLERRAMRQHQRILAHSLVGTPNYI  838 (1034)
T ss_pred             ce--------------eccccccccCCCccccccCCCchh------hccccccchHHHHHHHhhhhhhhhhhhcCCCccc
Confidence            21              1111111110000  000111111      11111110000     001122233569999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |||++....|+..+|.||.|||||||+.|+.||......+.-.++++-.-.+-....-. .+.++.++|.++. -+++.|
T Consensus       839 apevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~-ls~e~~~li~kLc-~sad~R  916 (1034)
T KOG0608|consen  839 APEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGN-LSKEALDLIQKLC-CSADSR  916 (1034)
T ss_pred             ChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccc-cCHHHHHHHHHHh-cChhhh
Confidence            99999999999999999999999999999999998777666555554332222222222 3338888888754 477888


Q ss_pred             CCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCC
Q 013016          394 LGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ  431 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~  431 (451)
                      +. +.++++|..||||++|||..++++..|-||+..-+
T Consensus       917 LG-kng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHp  953 (1034)
T KOG0608|consen  917 LG-KNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHP  953 (1034)
T ss_pred             hc-ccchhhhhcCccccccchHhhhhccCCcCccccCC
Confidence            87 55688999999999999999999999999998854

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-44  Score=328.12  Aligned_cols=301  Identities=36%  Similarity=0.682  Sum_probs=253.1

Q ss_pred             CCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCc
Q 013016           73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFL  151 (451)
Q Consensus        73 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nI  151 (451)
                      .++++.+++|.+++.||.|+|++|.+++++.+.+         .||+|+++++.....+...+++.|..+..+- +||.+
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~q---------iyamkvvkkel~nddedidwvqtek~vfe~asn~pfl  313 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQ---------IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFL  313 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcccce---------eeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeE
Confidence            3556778999999999999999999999998876         5999999999988888888888888888765 79999


Q ss_pred             cceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          152 PTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       152 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      |-+..+|..+..+++|.||++||+|-=.++++  .+++++.++.+...|+.||.|||++|||+||||.+|+|++..|.+|
T Consensus       314 vglhscfqtesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghik  391 (593)
T KOG0695|consen  314 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIK  391 (593)
T ss_pred             EehhhhhcccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCcee
Confidence            99999999999999999999999996555554  5699999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|+|.++.--                                                       .....+.++|||+.
T Consensus       392 ltdygmcke~l-------------------------------------------------------~~gd~tstfcgtpn  416 (593)
T KOG0695|consen  392 LTDYGMCKEGL-------------------------------------------------------GPGDTTSTFCGTPN  416 (593)
T ss_pred             ecccchhhcCC-------------------------------------------------------CCCcccccccCCCc
Confidence            99999985211                                                       01234567899999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC-------CChHH-HHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-------PSNET-TLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~-------~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      |.|||++.|..|+..+|.|+||++|+||+.|+.||.-       .+.++ .+.-|+...+.+|....-     .+..+++
T Consensus       417 yiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsv-----kas~vlk  491 (593)
T KOG0695|consen  417 YIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSV-----KASHVLK  491 (593)
T ss_pred             ccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeeh-----hhHHHHH
Confidence            9999999999999999999999999999999999963       22333 455566666666654332     6778999


Q ss_pred             HhcccCcCCcCCC--CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCc
Q 013016          384 GLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQ  444 (451)
Q Consensus       384 ~~L~~dP~~Rpt~--~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~  444 (451)
                      ..|++||.+|...  .-++.++..|+||+.++|..+  ....||+.|...+.-....++-+..++
T Consensus       492 gflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~~fd~qft~e  556 (593)
T KOG0695|consen  492 GFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLDNFDTQFTSE  556 (593)
T ss_pred             HhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCccccccccccC
Confidence            9999999999875  335789999999999999754  788899999998765555555444443

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.5e-44  Score=341.47  Aligned_cols=256  Identities=35%  Similarity=0.613  Sum_probs=208.8

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.+.||+|+||+||+|.+..+.+.         ||+|++......... ......|+.++++++|+||+++++++...
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~---------~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~   70 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQK---------VAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDD   70 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEE---------EEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEES
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeE---------EEEEEeccccccccc-cchhhhhhhcccccccccccccccccccc
Confidence            78999999999999999999988754         999999877544333 22334599999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ...++|||++.+++|.+++...  ..+++..+..++.||+.||++||++|++|+||||+||+++.++.++|+|||.+...
T Consensus        71 ~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   71 NYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             SEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999833  55899999999999999999999999999999999999999999999999997421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc-C
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS-G  320 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~  320 (451)
                      .                                                       ..........|+..|+|||++. +
T Consensus       149 ~-------------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~  173 (260)
T PF00069_consen  149 S-------------------------------------------------------ENNENFNPFVGTPEYMAPEVLQQG  173 (260)
T ss_dssp             T-------------------------------------------------------STTSEBSSSSSSGGGSCHHHHTTT
T ss_pred             c-------------------------------------------------------cccccccccccccccccccccccc
Confidence            0                                                       0011112347888999999998 7


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      ..++.++||||||+++|+|++|..||.....   ...+................ .....+.++|.+||+.||++||+  
T Consensus       174 ~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~~p~~R~~--  250 (260)
T PF00069_consen  174 KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR-EKSEELRDLIKKMLSKDPEQRPS--  250 (260)
T ss_dssp             SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT-TSHHHHHHHHHHHSSSSGGGSTT--
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc-hhHHHHHHHHHHHccCChhHCcC--
Confidence            7889999999999999999999999998732   33333333322221111111 11248999999999999999999  


Q ss_pred             CChHHHHcCCCc
Q 013016          398 RGAADVKTHPFF  409 (451)
Q Consensus       398 ~~~~ell~hp~~  409 (451)
                        +.++++||||
T Consensus       251 --~~~l~~~~~~  260 (260)
T PF00069_consen  251 --AEELLKHPWF  260 (260)
T ss_dssp             --HHHHHTSGGG
T ss_pred             --HHHHhcCCCC
Confidence              9999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-43  Score=334.81  Aligned_cols=260  Identities=28%  Similarity=0.399  Sum_probs=212.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ++|.+.+.||+|++|.||+|.+..+++         .||+|++......  .......+.+|+.++++++|+||++++++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~---------~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   72 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGR---------ELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGC   72 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCc---------EEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEE
Confidence            579999999999999999999876655         3999998654221  22334567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +..++..++||||++|++|.+++...  +.+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||+
T Consensus        73 ~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~  150 (263)
T cd06625          73 LRDDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGA  150 (263)
T ss_pred             EccCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence            99999999999999999999988765  4589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                    .........|+..|+|||+
T Consensus       151 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625         151 SKRLQTICS----------------------------------------------------SGTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             ceecccccc----------------------------------------------------ccccccCCCcCccccCcce
Confidence            743211000                                                    0000012367888999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++||||||+++|+|++|+.||...........+........  . +...+..+.++|.+||..+|.+|||  
T Consensus       179 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~li~~~l~~~p~~Rpt--  253 (263)
T cd06625         179 ISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ--L-PSHVSPDARNFLRRTFVENAKKRPS--  253 (263)
T ss_pred             eccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC--C-CccCCHHHHHHHHHHhhcCcccCCC--
Confidence            9998899999999999999999999999988766665555544332211  1 1223448999999999999999999  


Q ss_pred             CChHHHHcCCCc
Q 013016          398 RGAADVKTHPFF  409 (451)
Q Consensus       398 ~~~~ell~hp~~  409 (451)
                        +.++++|+||
T Consensus       254 --~~~ll~~~~~  263 (263)
T cd06625         254 --AEELLRHFFV  263 (263)
T ss_pred             --HHHHhhCCCC
Confidence              9999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=2.5e-43  Score=332.91  Aligned_cols=256  Identities=26%  Similarity=0.408  Sum_probs=212.7

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|++|.||+|.++.+++         .||+|.+...... ......+..|++++++++|+||+++++.+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGK---------QYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEG   70 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCc---------EEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecC
Confidence            48999999999999999999877655         3999998754322 2334556779999999999999999998764


Q ss_pred             -CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          161 -SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                       .+.+|+||||+++++|.+++.......+++.+++.++.|++.||++||++|++|+||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~  150 (257)
T cd08223          71 EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIAR  150 (257)
T ss_pred             CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceE
Confidence             4578999999999999999987666679999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|++.|+|||++.
T Consensus       151 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  175 (257)
T cd08223         151 VLENQC-------------------------------------------------------DMASTLIGTPYYMSPELFS  175 (257)
T ss_pred             EecccC-------------------------------------------------------CccccccCCcCccChhHhc
Confidence            321100                                                       0011236888999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+..+.....    +...+.++.+|+.+||+.||.+||+    
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~----  247 (257)
T cd08223         176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPM----PKDYSPELGELIATMLSKRPEKRPS----  247 (257)
T ss_pred             CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC----ccccCHHHHHHHHHHhccCcccCCC----
Confidence            98899999999999999999999999988776666666666543221    1223448999999999999999999    


Q ss_pred             hHHHHcCCCc
Q 013016          400 AADVKTHPFF  409 (451)
Q Consensus       400 ~~ell~hp~~  409 (451)
                      +.++++||||
T Consensus       248 ~~~~l~~~~~  257 (257)
T cd08223         248 VKSILRQPYI  257 (257)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3e-45  Score=341.91  Aligned_cols=258  Identities=24%  Similarity=0.397  Sum_probs=209.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-C-C----Ccc
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-H-P----FLP  152 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~----nIv  152 (451)
                      -++|.+..+||+|.||.|-.|.++....         .|||||++.-    .+..+....|++++.++. + |    -+|
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~---------~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv  154 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKE---------HVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCV  154 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCc---------eehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence            3779999999999999999999988754         4999999754    233445556899999983 2 2    288


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc------
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS------  226 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~------  226 (451)
                      .+.+||+..+|.|||+|.+ |-|+.+++..+...+++...++.|+.||+++++|||+++++|.||||+|||+.+      
T Consensus       155 ~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~  233 (415)
T KOG0671|consen  155 QMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKT  233 (415)
T ss_pred             eeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEE
Confidence            9999999999999999999 889999999988889999999999999999999999999999999999999953      


Q ss_pred             --------------CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCc
Q 013016          227 --------------DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR  292 (451)
Q Consensus       227 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (451)
                                    +..++|+|||.|....                                                  
T Consensus       234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~--------------------------------------------------  263 (415)
T KOG0671|consen  234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDH--------------------------------------------------  263 (415)
T ss_pred             eccCCccceeccCCCcceEEEecCCcceec--------------------------------------------------
Confidence                          2357899999874321                                                  


Q ss_pred             ccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCC
Q 013016          293 LFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS  372 (451)
Q Consensus       293 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  372 (451)
                              ....+++.|..|+|||+++|-+|+.++||||+||||+||+||...|....+.+.+..+..-..++|..+...
T Consensus       264 --------e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r  335 (415)
T KOG0671|consen  264 --------EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKK  335 (415)
T ss_pred             --------cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhh
Confidence                    122356889999999999999999999999999999999999999998777664322222111222111110


Q ss_pred             c-----------------------------------------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          373 M-----------------------------------------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       373 ~-----------------------------------------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .                                         .-.++.+||++||.+||.+|+|    +.|+|.||||+.
T Consensus       336 ~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~  411 (415)
T KOG0671|consen  336 TRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFAR  411 (415)
T ss_pred             hhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhc
Confidence            0                                         0116789999999999999999    999999999997


Q ss_pred             C
Q 013016          412 L  412 (451)
Q Consensus       412 ~  412 (451)
                      .
T Consensus       412 ~  412 (415)
T KOG0671|consen  412 L  412 (415)
T ss_pred             C
Confidence            4

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.3e-43  Score=339.78  Aligned_cols=269  Identities=32%  Similarity=0.617  Sum_probs=204.0

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHH---HHHCCCCCccceeEEEEeCCe
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI---LKMLDHPFLPTLYAEFEASNF  163 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~---l~~l~h~nIv~l~~~~~~~~~  163 (451)
                      .||+|+||.||+|.+..+++         .+|+|++.+..............|..+   +....|+||+.+++++...+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   71 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGK---------MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDK   71 (279)
T ss_pred             CcccCCCeEEEEEEECCCCc---------EEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCe
Confidence            48999999999999876655         499999976533222222222334333   334579999999999999999


Q ss_pred             EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCC
Q 013016          164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA  243 (451)
Q Consensus       164 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  243 (451)
                      .|+||||++|++|.+++...  +.+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus        72 ~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~  149 (279)
T cd05633          72 LCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  149 (279)
T ss_pred             EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccc
Confidence            99999999999999888764  4599999999999999999999999999999999999999999999999998732110


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC-CC
Q 013016          244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG-GS  322 (451)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  322 (451)
                      .                                                         ......|+..|+|||.+.+ ..
T Consensus       150 ~---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~  172 (279)
T cd05633         150 K---------------------------------------------------------KPHASVGTHGYMAPEVLQKGTA  172 (279)
T ss_pred             c---------------------------------------------------------CccCcCCCcCccCHHHhcCCCC
Confidence            0                                                         0011268899999999864 55


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCC
Q 013016          323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSN--ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRG  399 (451)
Q Consensus       323 ~~~~~DIwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~  399 (451)
                      ++.++|||||||++|+|++|..||.....  .........   ......+. ..+.++.++|.+||..||.+|++. ...
T Consensus       173 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~~~~~~~  248 (279)
T cd05633         173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TVNVELPD-SFSPELKSLLEGLLQRDVSKRLGCLGRG  248 (279)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cCCcCCcc-ccCHHHHHHHHHHhcCCHHHhcCCCCCC
Confidence            78999999999999999999999975322  222222211   11111222 233489999999999999999921 111


Q ss_pred             hHHHHcCCCcCCCCcccc--cccCCCCCCC
Q 013016          400 AADVKTHPFFKGLNFALI--RSLTPPEIPG  427 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~~~--~~~~~~~~p~  427 (451)
                      +.|+++||||+++++...  ...++|.+|+
T Consensus       249 ~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  278 (279)
T cd05633         249 AQEVKEHVFFKGIDWQQVYLQKYPPPLIPP  278 (279)
T ss_pred             HHHHHhCccccCCCHhHHhcCCCCCCCCCC
Confidence            999999999999998754  5556666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.3e-43  Score=347.69  Aligned_cols=268  Identities=23%  Similarity=0.298  Sum_probs=207.4

Q ss_pred             EEeeeccC--CeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           84 LHRRIGAG--DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        84 ~~~~LG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      +.++||+|  +|++||+|.++.+++         .||+|++...... ......+..|+.+++.++||||+++++++..+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~---------~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~   71 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGE---------YVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIAD   71 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCc---------EEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC
Confidence            46789999  789999999987765         4999999765332 23445677799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..|+||||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+...
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227          72 NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            99999999999999999987655556999999999999999999999999999999999999999999999999865321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC-
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG-  320 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  320 (451)
                      ........                                                ..........++..|+|||++.+ 
T Consensus       152 ~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~  183 (327)
T cd08227         152 INHGQRLR------------------------------------------------VVHDFPKYSVKVLPWLSPEVLQQN  183 (327)
T ss_pred             cccccccc------------------------------------------------ccccccccccceecccChHHhhcc
Confidence            10000000                                                00000011256778999999976 


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC--------------------------------
Q 013016          321 -GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT--------------------------------  367 (451)
Q Consensus       321 -~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~--------------------------------  367 (451)
                       ..++.++|||||||++|+|++|+.||..............+......                                
T Consensus       184 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (327)
T cd08227         184 LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTP  263 (327)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCc
Confidence             35889999999999999999999999876555444443332211000                                


Q ss_pred             ---------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          368 ---------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       368 ---------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                               .......+.++.+||.+||+.||++|||    ++||++||||+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~ell~~p~f~~~~  314 (327)
T cd08227         264 RPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS----ASTLLNHSFFKQIK  314 (327)
T ss_pred             CccccCCcccccccccCHHHHHHHHHHHhhCchhcCC----HHHHhcChhhhhcc
Confidence                     0001112347899999999999999999    99999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=6.8e-44  Score=347.90  Aligned_cols=256  Identities=23%  Similarity=0.319  Sum_probs=189.6

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe--CC
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA--SN  162 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~--~~  162 (451)
                      .++||+|+||+||+|.++....       +..||+|++....     ......+|+.++++++||||+++++++..  +.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~-------~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   73 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKD-------DRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADR   73 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCC-------CceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCc
Confidence            4579999999999999764321       1249999986432     12335569999999999999999999854  45


Q ss_pred             eEEEEEeeccCCchhhhhhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc----cCCCEE
Q 013016          163 FSCIVMEFCSGGDLHSLRHKQ-------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR----SDGHIM  231 (451)
Q Consensus       163 ~~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~----~~~~~k  231 (451)
                      +.|+||||+ +++|.+++...       ....+++..++.++.||+.||+|||++||+||||||+|||++    .++.+|
T Consensus        74 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~k  152 (317)
T cd07868          74 KVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  152 (317)
T ss_pred             EEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEE
Confidence            789999999 66888876532       123589999999999999999999999999999999999994    557899


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                    .........||+.
T Consensus       153 l~DfG~a~~~~~~~~----------------------------------------------------~~~~~~~~~~t~~  180 (317)
T cd07868         153 IADMGFARLFNSPLK----------------------------------------------------PLADLDPVVVTFW  180 (317)
T ss_pred             EeecCceeccCCCCc----------------------------------------------------cccccCCcccccc
Confidence            999999853321000                                                    0001113478999


Q ss_pred             ccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHhcCCCCCCCC-------------
Q 013016          312 YVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---------TTLRNIVKKPLTFPTQ-------------  368 (451)
Q Consensus       312 y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~---------~~~~~i~~~~~~~~~~-------------  368 (451)
                      |+|||++.+. .++.++|||||||++|+|++|+.||......         ..+..+..........             
T Consensus       181 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (317)
T cd07868         181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST  260 (317)
T ss_pred             ccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhh
Confidence            9999999874 5899999999999999999999999753321         1222222110000000             


Q ss_pred             --------------------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          369 --------------------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       369 --------------------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                                          ......+.++.+||.+||++||.+|||    ++|+|+||||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t----~~e~l~hp~f  317 (317)
T cd07868         261 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT----SEQAMQDPYF  317 (317)
T ss_pred             hhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence                                000011236889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.1e-43  Score=340.45  Aligned_cols=264  Identities=29%  Similarity=0.431  Sum_probs=215.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|++.++||.|+||.||+|.+..+.+         .||+|++....   ......+..|+.+++.++|+||+++++.+.
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~---------~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGA---------LAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFY   79 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCc---------eEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEE
Confidence            569999999999999999999887665         49999987542   334556677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++.+|+||||++|++|..++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  158 (292)
T cd06644          80 WDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSA  158 (292)
T ss_pred             eCCeEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccce
Confidence            9999999999999999988775543 458999999999999999999999999999999999999999999999999873


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||++.
T Consensus       159 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         159 KNVKT-------------------------------------------------------LQRRDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             ecccc-------------------------------------------------------ccccceecCCccccCceeec
Confidence            21100                                                       00111236788899999985


Q ss_pred             C-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       320 ~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      +     ..++.++|||||||++|+|++|..||........+.++......  ....+...+.++.+||.+||..||++||
T Consensus       184 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp  261 (292)
T cd06644         184 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP--TLSQPSKWSMEFRDFLKTALDKHPETRP  261 (292)
T ss_pred             cccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc--cCCCCcccCHHHHHHHHHHhcCCcccCc
Confidence            3     34688999999999999999999999887666666555443321  1111222344899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCCcccc
Q 013016          395 GSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      +    +.++++||||..+++...
T Consensus       262 ~----~~~il~~~~~~~~~~~~~  280 (292)
T cd06644         262 S----AAQLLEHPFVSSVTSNRP  280 (292)
T ss_pred             C----HHHHhcCccccccccchh
Confidence            9    999999999999888654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.1e-43  Score=338.84  Aligned_cols=259  Identities=27%  Similarity=0.356  Sum_probs=203.4

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||+|++|.||+|.++.++.         .||+|++..... .......+..|+.+++.+.|+||+++++++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   70 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQ---------IVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQ   70 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCc---------EEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEee
Confidence            58999999999999999999876654         499999865421 12233556679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ++..|+||||++ ++|.+++.... +..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  149 (285)
T cd07861          71 ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLAR  149 (285)
T ss_pred             CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECccccee
Confidence            999999999996 68888876543 3568999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......+++.|+|||++.
T Consensus       150 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  174 (285)
T cd07861         150 AFGIPV-------------------------------------------------------RVYTHEVVTLWYRAPEVLL  174 (285)
T ss_pred             ecCCCc-------------------------------------------------------ccccCCcccccccChHHhc
Confidence            321100                                                       0000125678899999987


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC------------------C------CCCCCcC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP------------------T------QSPSSMS  374 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------------------~------~~~~~~~  374 (451)
                      +. .++.++|||||||++|+|++|+.||...........+........                  .      .......
T Consensus       175 ~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (285)
T cd07861         175 GSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNL  254 (285)
T ss_pred             CCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCC
Confidence            64 468899999999999999999999987665443333222110000                  0      0001113


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      +.++.+||.+||+.||.+|||    +.+|+.||||
T Consensus       255 ~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~  285 (285)
T cd07861         255 DEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF  285 (285)
T ss_pred             CHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence            448889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=5.2e-43  Score=340.47  Aligned_cols=259  Identities=29%  Similarity=0.417  Sum_probs=208.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.+..++.         .+|+|.+....  .......+..|++++++++||||+++++++.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   69 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGL---------IMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFY   69 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCe---------EEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            369999999999999999999877654         49999886442  2233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .++++|+||||++|++|.+++...  +.+++..+..++.||+.||.|||+ .+++|+||||+|||++.++.+||+|||++
T Consensus        70 ~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  147 (308)
T cd06615          70 SDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  147 (308)
T ss_pred             eCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence            999999999999999999998765  558999999999999999999997 69999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                         .......|+..|+|||++
T Consensus       148 ~~~~~---------------------------------------------------------~~~~~~~~~~~~~aPE~~  170 (308)
T cd06615         148 GQLID---------------------------------------------------------SMANSFVGTRSYMSPERL  170 (308)
T ss_pred             ccccc---------------------------------------------------------cccccCCCCcCccChhHh
Confidence            32110                                                         001124688899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC---------------------------------
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF---------------------------------  365 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~---------------------------------  365 (451)
                      .+..++.++|||||||++|+|++|+.||...........+.......                                 
T Consensus       171 ~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (308)
T cd06615         171 QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP  250 (308)
T ss_pred             cCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCC
Confidence            88889999999999999999999999997654333222111110000                                 


Q ss_pred             CCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       366 ~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      +...+....+.++.+|+.+||..||++||+    +.+|++||||.+.
T Consensus       251 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~~~~~~~  293 (308)
T cd06615         251 PPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKELTKHPFIKRA  293 (308)
T ss_pred             CccCcCcccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhhc
Confidence            000111123447999999999999999999    9999999999873

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-46  Score=338.14  Aligned_cols=256  Identities=26%  Similarity=0.374  Sum_probs=221.7

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      -|.++.+||+|+||.||+|.+++.+.         ++|||.+.-+     ...+.+..|+.|++++..+++|++||.+..
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~---------v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK   99 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGH---------VLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK   99 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCc---------EEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhcc
Confidence            38999999999999999999887765         6999998643     345677789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      +..+++|||||.-|++.++++.. ++.+++..+..+++..+.||+|||...-||||||..|||++.+|.+||+|||.|-.
T Consensus       100 ~sDLWIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQ  178 (502)
T KOG0574|consen  100 HSDLWIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQ  178 (502)
T ss_pred             CCceEeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccch
Confidence            99999999999999999988765 46799999999999999999999999999999999999999999999999999731


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                                                                             ..+...+.+++.||+.|||||++..
T Consensus       179 -------------------------------------------------------LTDTMAKRNTVIGTPFWMAPEVI~E  203 (502)
T KOG0574|consen  179 -------------------------------------------------------LTDTMAKRNTVIGTPFWMAPEVIEE  203 (502)
T ss_pred             -------------------------------------------------------hhhhHHhhCccccCcccccHHHHHH
Confidence                                                                   1224455667899999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      -.|+.++||||||++..||..|++||.+......+-.|-..  +.|....+..++.++.+||+.||-++|++|.|    +
T Consensus       204 IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~--PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A  277 (502)
T KOG0574|consen  204 IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTK--PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----A  277 (502)
T ss_pred             hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCC--CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----H
Confidence            99999999999999999999999999986665444333332  23444445566669999999999999999999    9


Q ss_pred             HHHHcCCCcCCC
Q 013016          401 ADVKTHPFFKGL  412 (451)
Q Consensus       401 ~ell~hp~~~~~  412 (451)
                      -+|++|||.++.
T Consensus       278 ~~L~~H~FiknA  289 (502)
T KOG0574|consen  278 LRLCEHTFIKNA  289 (502)
T ss_pred             HHHhhhhhhcCC
Confidence            999999999983

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.8e-43  Score=337.37  Aligned_cols=255  Identities=29%  Similarity=0.440  Sum_probs=205.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||+|++....  .......+..|+.++++++|+||+++++.+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   69 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRR---------ILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFF   69 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCc---------EEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence            368889999999999999999876655         49999987542  2233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||+++++|..+      ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~  143 (279)
T cd06619          70 VENRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVST  143 (279)
T ss_pred             ECCEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence            99999999999999998654      237889999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                         ......+|+..|+|||++.
T Consensus       144 ~~~~---------------------------------------------------------~~~~~~~~~~~y~aPE~~~  166 (279)
T cd06619         144 QLVN---------------------------------------------------------SIAKTYVGTNAYMAPERIS  166 (279)
T ss_pred             eccc---------------------------------------------------------ccccCCCCChhhcCceeec
Confidence            2210                                                         0011247889999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-------TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +..++.++|||||||++|+|++|+.||......       .....+......   .......+.++.+|+.+||..||++
T Consensus       167 ~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~  243 (279)
T cd06619         167 GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP---VLPVGQFSEKFVHFITQCMRKQPKE  243 (279)
T ss_pred             CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCC---CCCCCcCCHHHHHHHHHHhhCChhh
Confidence            988999999999999999999999999653211       222222222111   1111223348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ||+    ++|+++||||+..+..
T Consensus       244 Rp~----~~eil~~~~~~~~~~~  262 (279)
T cd06619         244 RPA----PENLMDHPFIVQYNDG  262 (279)
T ss_pred             CCC----HHHHhcCcccccccCc
Confidence            999    9999999999986543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-44  Score=317.83  Aligned_cols=261  Identities=21%  Similarity=0.303  Sum_probs=214.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l  154 (451)
                      ....++.+++..||.|+.|.||+++.+.++.         ++|||.+++.  .+.+..+++...+.++.+.+ +|+||+.
T Consensus        88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~---------iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c  156 (391)
T KOG0983|consen   88 QADINDLENLGDLGSGTCGQVWKMRFRSTGH---------IIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQC  156 (391)
T ss_pred             ccChHHhhhHHhhcCCCccceEEEEEcccce---------EEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeee
Confidence            3445678888999999999999999987654         6999999876  44555667777777777665 9999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEe
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +|+|..+...++.||.| ..-+..++.+.+ +++++..+-++...++.||.||.+ +||+||||||+|||+++.|++|||
T Consensus       157 ~GyFi~n~dV~IcMelM-s~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlC  234 (391)
T KOG0983|consen  157 FGYFITNTDVFICMELM-STCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLC  234 (391)
T ss_pred             eeEEeeCchHHHHHHHH-HHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEee
Confidence            99999999999999998 666777777654 569999999999999999999995 689999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++-.+-+..+.                                                        ..-.|.+.||
T Consensus       235 DFGIsGrlvdSkAh--------------------------------------------------------trsAGC~~YM  258 (391)
T KOG0983|consen  235 DFGISGRLVDSKAH--------------------------------------------------------TRSAGCAAYM  258 (391)
T ss_pred             cccccceeeccccc--------------------------------------------------------ccccCCcccc
Confidence            99998433211111                                                        0126889999


Q ss_pred             CcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          314 SPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       314 aPE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |||-+.-   ..|+.++||||||+.++||.||+.||.+.+ +.+++-.+++..++  ......-.+.++++|+..||++|
T Consensus       259 aPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP--~L~~~~gFSp~F~~fv~~CL~kd  336 (391)
T KOG0983|consen  259 APERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP--LLPGHMGFSPDFQSFVKDCLTKD  336 (391)
T ss_pred             CccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC--CCCcccCcCHHHHHHHHHHhhcC
Confidence            9999864   358999999999999999999999999854 56777777775442  22222226669999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCC
Q 013016          390 PCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +.+||.    ..+||+|||...
T Consensus       337 ~r~RP~----Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  337 HRKRPK----YNKLLEHPFIKR  354 (391)
T ss_pred             cccCcc----hHHHhcCcceee
Confidence            999999    999999999987

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-43  Score=346.67  Aligned_cols=267  Identities=26%  Similarity=0.339  Sum_probs=209.4

Q ss_pred             CCCchhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHH
Q 013016           57 RSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA  136 (451)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~  136 (451)
                      ....|++.+++.||         ++|.-.++||+|+||.||+|...++.          .||||.+.......   ..+|
T Consensus        61 ~~~~fs~~el~~AT---------~~Fs~~~~ig~Ggfg~VYkG~l~~~~----------~vAVK~~~~~~~~~---~~eF  118 (361)
T KOG1187|consen   61 PLRSFSYDELRKAT---------NNFSESNLIGEGGFGTVYKGVLSDGT----------VVAVKRLSSNSGQG---EREF  118 (361)
T ss_pred             CcceeeHHHHHHHH---------hCCchhcceecCCCeEEEEEEECCCC----------EEEEEEecCCCCcc---hhHH
Confidence            45669999999999         99999999999999999999998763          39999887543221   3458


Q ss_pred             HHHHHHHHHCCCCCccceeEEEEeCC-eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---C
Q 013016          137 EMEKKILKMLDHPFLPTLYAEFEASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG---I  212 (451)
Q Consensus       137 ~~e~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---i  212 (451)
                      ..|+.++.+++|+|+|+++|||.+.+ +.+|||||+++|+|.++++......++|..+.+|+.+++.||+|||+..   |
T Consensus       119 ~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~i  198 (361)
T KOG1187|consen  119 LNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPI  198 (361)
T ss_pred             HHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCE
Confidence            88999999999999999999999998 5999999999999999998765437999999999999999999999754   9


Q ss_pred             eeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCc
Q 013016          213 IYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR  292 (451)
Q Consensus       213 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (451)
                      ||||||++|||+|+++++||+|||+|+.....                                                
T Consensus       199 iHrDiKssNILLD~~~~aKlsDFGLa~~~~~~------------------------------------------------  230 (361)
T KOG1187|consen  199 IHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG------------------------------------------------  230 (361)
T ss_pred             ecCCCCHHHeeECCCCCEEccCccCcccCCcc------------------------------------------------
Confidence            99999999999999999999999998432210                                                


Q ss_pred             cccccccccccccc-ccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--hH----HHHH-HHhcCCCC
Q 013016          293 LFVAEPVAARSCSF-VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS--NE----TTLR-NIVKKPLT  364 (451)
Q Consensus       293 ~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~--~~----~~~~-~i~~~~~~  364 (451)
                             .....+. .||.+|+|||++..+..+.++||||||++|+||+||+.+.....  ..    +... .+..+...
T Consensus       231 -------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~  303 (361)
T KOG1187|consen  231 -------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLR  303 (361)
T ss_pred             -------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchh
Confidence                   0000011 69999999999998889999999999999999999998887532  11    1111 11121111


Q ss_pred             -CCCCC-C-CCcC----hHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          365 -FPTQS-P-SSMS----EYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       365 -~~~~~-~-~~~~----~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                       +.+.. . ....    -..+..+..+|++.+|.+||+    +.||+
T Consensus       304 eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~----m~~Vv  346 (361)
T KOG1187|consen  304 EIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPT----MSQVV  346 (361)
T ss_pred             heeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcC----HHHHH
Confidence             11100 0 1111    114678999999999999999    66653

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.1e-43  Score=363.20  Aligned_cols=277  Identities=22%  Similarity=0.295  Sum_probs=198.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCC------CCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRG------HEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      ++|+++++||+|+||+||+|..+........      ...+...+.|++.+...........+.+|+.++++++|+||++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            6899999999999999999987543321000      0000011112222222222334456778999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQP---HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      +++++...+..|+|+|++ +++|.+++....   ........++.|+.||+.||+|||++||+||||||+|||++.++.+
T Consensus       228 l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v  306 (501)
T PHA03210        228 IEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI  306 (501)
T ss_pred             EeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            999999999999999999 667777665432   1224466788899999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                      ........+||.
T Consensus       307 kL~DFGla~~~~~~------------------------------------------------------~~~~~~~~~gt~  332 (501)
T PHA03210        307 VLGDFGTAMPFEKE------------------------------------------------------REAFDYGWVGTV  332 (501)
T ss_pred             EEEeCCCceecCcc------------------------------------------------------cccccccccCCc
Confidence            99999998532110                                                      001112347999


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC-CCCC--ChHHHHHHHhcCCC----CCCC----------------
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP-FAAP--SNETTLRNIVKKPL----TFPT----------------  367 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~p-f~~~--~~~~~~~~i~~~~~----~~~~----------------  367 (451)
                      .|+|||++.+..++.++|||||||+||||++|..+ |...  .....+.+++....    .++.                
T Consensus       333 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~  412 (501)
T PHA03210        333 ATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDH  412 (501)
T ss_pred             CCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhccc
Confidence            99999999999999999999999999999998764 4332  22233333322111    0110                


Q ss_pred             -------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          368 -------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       368 -------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                             .......+.++.++|.+||++||.+|||    +.|+|.||||.+....
T Consensus       413 ~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rps----a~elL~hp~f~~~~~~  463 (501)
T PHA03210        413 AGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPG----AAELLALPLFSAEEEE  463 (501)
T ss_pred             CccchhhHHHhcCCChHHHHHHHHHhccCcccCcC----HHHHhhChhhhcCCch
Confidence                   0000112336788899999999999999    9999999999986554

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-43  Score=332.08  Aligned_cols=258  Identities=35%  Similarity=0.651  Sum_probs=210.9

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHH-HHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||.|+||.||+|.+...++         .||+|++.+...........+..|..++ ...+|+||+++++++..++..
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   72 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGD---------YFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYL   72 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCC---------eEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeE
Confidence            468999999999999877655         3999999765443333333444454443 455899999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      |+||||++|++|.+++...  ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++..... 
T Consensus        73 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-  149 (260)
T cd05611          73 YLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-  149 (260)
T ss_pred             EEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-
Confidence            9999999999999998765  4589999999999999999999999999999999999999999999999998742110 


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                                                                                .....|+..|+|||.+.+..++
T Consensus       150 ----------------------------------------------------------~~~~~~~~~y~~pe~~~~~~~~  171 (260)
T cd05611         150 ----------------------------------------------------------NKKFVGTPDYLAPETILGVGDD  171 (260)
T ss_pred             ----------------------------------------------------------cccCCCCcCccChhhhcCCCCc
Confidence                                                                      1123678889999999888889


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++||||||+++|+|++|..||........+..+.......+...... .+.++.++|.+||+.||++||++.. +.|++
T Consensus       172 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~p~~R~~~~~-~~~~l  249 (260)
T cd05611         172 KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEF-CSPEAVDLINRLLCMDPAKRLGANG-YQEIK  249 (260)
T ss_pred             chhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCccccc-CCHHHHHHHHHHccCCHHHccCCCc-HHHHH
Confidence            999999999999999999999998887777777766655444333322 3448999999999999999996211 68999


Q ss_pred             cCCCcCCCCcc
Q 013016          405 THPFFKGLNFA  415 (451)
Q Consensus       405 ~hp~~~~~~~~  415 (451)
                      .||||+.++|.
T Consensus       250 ~~~~~~~~~~~  260 (260)
T cd05611         250 SHPFFKSINWD  260 (260)
T ss_pred             cChHhhcCCCC
Confidence            99999998773

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.9e-43  Score=335.49  Aligned_cols=255  Identities=26%  Similarity=0.388  Sum_probs=205.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +.|.+.+.||.|+||.||+|.+....+         .||+|++....    .....+..|+.+++++ +|+||+++++++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   72 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQ---------LAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAF   72 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCc---------EEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEE
Confidence            679999999999999999999877665         49999986432    2224556688899988 699999999998


Q ss_pred             EeC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EAS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...      ..+|+||||+++++|.+++.......+++..++.++.|++.||+|||++||+|+||||+||+++.++.++|
T Consensus        73 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l  152 (272)
T cd06637          73 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL  152 (272)
T ss_pred             eecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEE
Confidence            753      47899999999999999988765567999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                       ........|+..|
T Consensus       153 ~Dfg~~~~~~~~-------------------------------------------------------~~~~~~~~g~~~y  177 (272)
T cd06637         153 VDFGVSAQLDRT-------------------------------------------------------VGRRNTFIGTPYW  177 (272)
T ss_pred             ccCCCceecccc-------------------------------------------------------cccCCcccccccc
Confidence            999997432110                                                       0011134688999


Q ss_pred             cCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          313 VSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       313 ~aPE~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +|||++.+     ..++.++|||||||++|+|++|+.||...........+.......   ......+.++.+|+.+||.
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~  254 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR---LKSKKWSKKFQSFIESCLV  254 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCC---CCCCCcCHHHHHHHHHHcC
Confidence            99999863     357889999999999999999999998765544444333322111   1122234589999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCc
Q 013016          388 KDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .||.+||+    +.++++||||
T Consensus       255 ~~p~~Rpt----~~~il~~~~~  272 (272)
T cd06637         255 KNHSQRPT----TEQLMKHPFI  272 (272)
T ss_pred             CChhhCCC----HHHHhhCCCC
Confidence            99999999    9999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3e-43  Score=374.70  Aligned_cols=263  Identities=26%  Similarity=0.401  Sum_probs=210.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|.++++||+|+||+||+|.++....         .||+|++...... ......+..|+.+++.++|||||+++++|
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~---------~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f   81 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQE---------FFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRF   81 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCe---------EEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence            4789999999999999999999887654         5999998754322 23345677899999999999999999988


Q ss_pred             Ee--CCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeccCCCCcEEEccC
Q 013016          159 EA--SNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHML-------GIIYRDLKPENVLVRSD  227 (451)
Q Consensus       159 ~~--~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~-------givH~Dlkp~NIll~~~  227 (451)
                      ..  ...+||||||+++++|.+++....  ...+++..++.|+.||+.||.|||+.       +||||||||+||||+.+
T Consensus        82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~  161 (1021)
T PTZ00266         82 LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG  161 (1021)
T ss_pred             EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence            54  457999999999999999887532  35699999999999999999999985       49999999999999642


Q ss_pred             -----------------CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCC
Q 013016          228 -----------------GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTP  290 (451)
Q Consensus       228 -----------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (451)
                                       +.+||+|||++......                                              
T Consensus       162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------------------------  195 (1021)
T PTZ00266        162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------------------------  195 (1021)
T ss_pred             ccccccccccccccCCCCceEEccCCcccccccc----------------------------------------------
Confidence                             35899999998432100                                              


Q ss_pred             CcccccccccccccccccCCCccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC
Q 013016          291 NRLFVAEPVAARSCSFVGTHEYVSPEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ  368 (451)
Q Consensus       291 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~  368 (451)
                                ......+||+.|+|||++.+  ..++.++||||||||||+|++|+.||........+...+.....++..
T Consensus       196 ----------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~  265 (1021)
T PTZ00266        196 ----------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIK  265 (1021)
T ss_pred             ----------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcC
Confidence                      00112479999999999865  347899999999999999999999998766555544444433333221


Q ss_pred             CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       369 ~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                          ..+.++.+||..||..+|.+||+    +.|+|.|+|++.+..+
T Consensus       266 ----~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~h~~ik~i~~p  304 (1021)
T PTZ00266        266 ----GKSKELNILIKNLLNLSAKERPS----ALQCLGYQIIKNVGPP  304 (1021)
T ss_pred             ----CCCHHHHHHHHHHhcCChhHCcC----HHHHhccHHHhhcCCC
Confidence                22348999999999999999999    9999999999986554

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=5.8e-43  Score=332.02  Aligned_cols=264  Identities=27%  Similarity=0.372  Sum_probs=215.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||+||+|.+..++.         .+|+|++.......  ....+..|+.+++.++|+||+++++.+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNE---------KVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFV   69 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCc---------EEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEe
Confidence            479999999999999999999876554         49999987543222  4566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+..++|||+++|++|.+++..... ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        70 ~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~  149 (267)
T cd06610          70 VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVS  149 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence            99999999999999999999876533 56899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                   .........|+..|+|||.+
T Consensus       150 ~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~~Pe~~  178 (267)
T cd06610         150 ASLADGGDR---------------------------------------------------TRKVRKTFVGTPCWMAPEVM  178 (267)
T ss_pred             HHhccCccc---------------------------------------------------cccccccccCChhhcChHHH
Confidence            533211000                                                   00011234688899999998


Q ss_pred             cCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-CCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 ~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ... .++.++|+|||||++|+|++|+.||........+..+...... ++........+..+.+++.+||..||++||+ 
T Consensus       179 ~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-  257 (267)
T cd06610         179 EQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT-  257 (267)
T ss_pred             ccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC-
Confidence            876 6899999999999999999999999887776666666554322 2111111233448899999999999999999 


Q ss_pred             CCChHHHHcCCCc
Q 013016          397 KRGAADVKTHPFF  409 (451)
Q Consensus       397 ~~~~~ell~hp~~  409 (451)
                         +.+|++||||
T Consensus       258 ---~~~ll~~p~~  267 (267)
T cd06610         258 ---AEELLKHKFF  267 (267)
T ss_pred             ---HHHHhhCCCC
Confidence               9999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-44  Score=356.73  Aligned_cols=250  Identities=29%  Similarity=0.487  Sum_probs=207.5

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      -+||+|.||+||-|+++.+..+         +|||-+.-+   .....+-+..|+.+.+.|+|.|||+++|.+.+++++-
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvr---------IaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~k  648 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVR---------IAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFK  648 (1226)
T ss_pred             EEeecCceeEEEeeccccceeE---------EEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEE
Confidence            4699999999999999988764         999998754   3345566777999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc-cCCCEEEeccCcccccC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRF--SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSN  242 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~  242 (451)
                      |.||.++||||.+++... -+++  .+..+..+.+||++||.|||++.|||||||.+|+||+ -.|.+||.|||.++.+.
T Consensus       649 IFMEqVPGGSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA  727 (1226)
T KOG4279|consen  649 IFMEQVPGGSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA  727 (1226)
T ss_pred             EEeecCCCCcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence            999999999999998764 3556  7889999999999999999999999999999999998 46899999999986432


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCC
Q 013016          243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS  322 (451)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  322 (451)
                      .                                                       ...-+-+|.||..|||||++..++
T Consensus       728 g-------------------------------------------------------inP~TETFTGTLQYMAPEvIDqG~  752 (1226)
T KOG4279|consen  728 G-------------------------------------------------------INPCTETFTGTLQYMAPEVIDQGP  752 (1226)
T ss_pred             c-------------------------------------------------------CCccccccccchhhhChHhhccCC
Confidence            1                                                       111233678999999999997654


Q ss_pred             --CCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH--hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          323 --HGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNI--VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       323 --~~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i--~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                        |+.++|||||||++.||.||++||.....-. .+-++  .+..+++|..    + +.+++.||.+|+.+||.+||+  
T Consensus       753 RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPee----l-saeak~FilrcFepd~~~R~s--  825 (1226)
T KOG4279|consen  753 RGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEE----L-SAEAKNFILRCFEPDPCDRPS--  825 (1226)
T ss_pred             cCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHH----H-HHHHHHHHHHHcCCCcccCcc--
Confidence              8999999999999999999999998754333 22222  2223333332    2 238999999999999999999  


Q ss_pred             CChHHHHcCCCcCCC
Q 013016          398 RGAADVKTHPFFKGL  412 (451)
Q Consensus       398 ~~~~ell~hp~~~~~  412 (451)
                        |.++|.+||++-.
T Consensus       826 --A~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  826 --AKDLLQDPFLQHN  838 (1226)
T ss_pred             --HHHhccCcccccC
Confidence              9999999999985

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=6.4e-43  Score=339.89  Aligned_cols=275  Identities=27%  Similarity=0.342  Sum_probs=213.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||.|+||.||+|.++.+++         .||+|++...... .........|+.++++++|+||+++++++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~---------~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   75 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGE---------IVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVV   75 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCc---------EEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEE
Confidence            4789999999999999999999887655         4999998744221 12223345699999999999999999998


Q ss_pred             EeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ...  +.+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||
T Consensus        76 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg  153 (309)
T cd07845          76 VGKHLDSIFLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFG  153 (309)
T ss_pred             ecCCCCeEEEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccc
Confidence            755  57899999995 58888877643 568999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++........                                                       ......++..|+|||
T Consensus       154 ~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y~aPE  178 (309)
T cd07845         154 LARTYGLPAK-------------------------------------------------------PMTPKVVTLWYRAPE  178 (309)
T ss_pred             eeeecCCccC-------------------------------------------------------CCCcccccccccChh
Confidence            9853221000                                                       000114567899999


Q ss_pred             cccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-------------------CCCCCC-----
Q 013016          317 VASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-------------------PTQSPS-----  371 (451)
Q Consensus       317 ~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------------------~~~~~~-----  371 (451)
                      .+.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.......                   +.....     
T Consensus       179 ~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (309)
T cd07845         179 LLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHK  258 (309)
T ss_pred             hhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHh
Confidence            9876 457899999999999999999999999887777666655421110                   000000     


Q ss_pred             -CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCC
Q 013016          372 -SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGM  428 (451)
Q Consensus       372 -~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~  428 (451)
                       ...+.++.+||.+||++||++|||    +.+++.||||++...+..    +++.|+.
T Consensus       259 ~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h~~f~~~~~~~~----~~~~~~~  308 (309)
T cd07845         259 FPWLSEAGLRLLNFLLMYDPKKRAT----AEEALESSYFKEKPLPCE----PEMMPTF  308 (309)
T ss_pred             ccccCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhccCCCCCC----CCcCCCC
Confidence             112447899999999999999999    999999999998555432    5555654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1e-42  Score=335.00  Aligned_cols=269  Identities=21%  Similarity=0.291  Sum_probs=212.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.++||.|+||.||+|..+...+.    ..+..||+|.+.....  ......+..|+.+++.++|+||+++++++
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   78 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKG----EAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVV   78 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCC----CcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            37899999999999999999987643211    1223599999864421  22234566799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQP--------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ...+..|+||||+++|+|.+++....        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~  158 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV  158 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence            99999999999999999999987532        1335677889999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +|+|||++........                                                     ........++.
T Consensus       159 ~L~Dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~  185 (288)
T cd05061         159 KIGDFGMTRDIYETDY-----------------------------------------------------YRKGGKGLLPV  185 (288)
T ss_pred             EECcCCcccccccccc-----------------------------------------------------ccccCCCcccc
Confidence            9999999743211000                                                     00001124567


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      .|+|||.+.+..++.++|||||||++|||++ |..||......+....+..+.....    +...+..+.+++.+||+.|
T Consensus       186 ~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~  261 (288)
T cd05061         186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ----PDNCPERVTDLMRMCWQFN  261 (288)
T ss_pred             cccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCC
Confidence            7999999998889999999999999999998 8999988777777666655432211    1122348999999999999


Q ss_pred             cCCcCCCCCChHHHHc------CCCcCCCCc
Q 013016          390 PCNRLGSKRGAADVKT------HPFFKGLNF  414 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~------hp~~~~~~~  414 (451)
                      |.+||+    +.++++      ||||.+++|
T Consensus       262 p~~Rps----~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         262 PKMRPT----FLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             hhHCcC----HHHHHHHHHhhcCCCCCCCCC
Confidence            999999    778776      999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-43  Score=342.94  Aligned_cols=260  Identities=27%  Similarity=0.424  Sum_probs=206.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ..|+++++||.||.+.||++..-+.+          .||+|.+.... .+.....-+..|+.+|.+|+ |.+||.+|++-
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~----------iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE  429 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQ----------IYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE  429 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCc----------chhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence            55999999999999999999865444          37887775443 34566777889999999995 99999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++++||||||= ..+|..+|...... ++.-.++.+..||+.|+.++|+.||||.||||.|+|+- .|.+||+|||+|
T Consensus       430 v~d~~lYmvmE~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA  506 (677)
T KOG0596|consen  430 VTDGYLYMVMECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIA  506 (677)
T ss_pred             ccCceEEEEeecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechh
Confidence            9999999999965 77899999876443 33338999999999999999999999999999999997 789999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                     ...-...+-+||+.||+||.+
T Consensus       507 ~aI~~D-----------------------------------------------------TTsI~kdsQvGT~NYMsPEAl  533 (677)
T KOG0596|consen  507 NAIQPD-----------------------------------------------------TTSIVKDSQVGTVNYMSPEAL  533 (677)
T ss_pred             cccCcc-----------------------------------------------------ccceeeccccCcccccCHHHH
Confidence            643211                                                     111112234899999999998


Q ss_pred             cCCC-----------CCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCC--CCCCCCCCCcChHHHHHHHHH
Q 013016          319 SGGS-----------HGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPL--TFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       319 ~~~~-----------~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      ....           .++++||||||||||+|+.|+.||.... ...-+..|..-..  ++|.....    .++.++++.
T Consensus       534 ~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~----~~li~~mK~  609 (677)
T KOG0596|consen  534 TDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN----DELIDVMKC  609 (677)
T ss_pred             hhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc----hHHHHHHHH
Confidence            5432           4678999999999999999999998744 3344555544322  33332222    149999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      ||.+||.+||+    +.|||+|||++.+.-
T Consensus       610 CL~rdPkkR~s----i~eLLqhpFl~~~~i  635 (677)
T KOG0596|consen  610 CLARDPKKRWS----IPELLQHPFLQIQPI  635 (677)
T ss_pred             HHhcCcccCCC----cHHHhcCcccccccc
Confidence            99999999999    999999999998443

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.3e-43  Score=334.34  Aligned_cols=256  Identities=30%  Similarity=0.440  Sum_probs=207.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+..+++         .||+|++.....   .....+..|+.+++.++|+||+++++.+.
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~   76 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGE---------LAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYL   76 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCc---------EEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence            579999999999999999999877665         499999875421   22345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++...  +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd06645          77 RRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSA  154 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeee
Confidence            999999999999999999988764  469999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||++.
T Consensus       155 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         155 QITAT-------------------------------------------------------IAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             EccCc-------------------------------------------------------ccccccccCcccccChhhhc
Confidence            22100                                                       00011236889999999974


Q ss_pred             ---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 ---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                         ...++.++|||||||++|+|++|..||...........+.......+........+..+.+++.+||+.||++||+ 
T Consensus       180 ~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~-  258 (267)
T cd06645         180 VERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT-  258 (267)
T ss_pred             cccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC-
Confidence               4457889999999999999999999997655544444433333322221111123447999999999999999999 


Q ss_pred             CCChHHHHcCCC
Q 013016          397 KRGAADVKTHPF  408 (451)
Q Consensus       397 ~~~~~ell~hp~  408 (451)
                         +++|++|||
T Consensus       259 ---~~~ll~~~~  267 (267)
T cd06645         259 ---AEKLLQHPF  267 (267)
T ss_pred             ---HHHHhcCCC
Confidence               999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=8.8e-43  Score=329.16  Aligned_cols=256  Identities=26%  Similarity=0.441  Sum_probs=214.9

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||.|+||.||++....+++         .||+|.+...... ......+..|+.++++++|+||+++++++..
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGK---------QYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEE   70 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCC---------EEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecC
Confidence            58999999999999999999877655         3999998754322 2234567789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .++.|+||||+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~  150 (256)
T cd08218          71 NGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARV  150 (256)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceee
Confidence            99999999999999999988776555689999999999999999999999999999999999999999999999999742


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                       ........|+..|+|||++.+
T Consensus       151 ~~~~-------------------------------------------------------~~~~~~~~~~~~~~~pe~~~~  175 (256)
T cd08218         151 LNST-------------------------------------------------------VELARTCIGTPYYLSPEICEN  175 (256)
T ss_pred             cCcc-------------------------------------------------------hhhhhhccCCccccCHHHhCC
Confidence            2110                                                       000012357888999999998


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++|||||||++|+|++|+.||......+....+..+.....    +...+.++.++|.+||+.+|.+||+    +
T Consensus       176 ~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~----~  247 (256)
T cd08218         176 RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV----SSHYSYDLRNLVSQLFKRNPRDRPS----V  247 (256)
T ss_pred             CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC----cccCCHHHHHHHHHHhhCChhhCcC----H
Confidence            8899999999999999999999999988777777777766543221    1123348999999999999999999    9


Q ss_pred             HHHHcCCCc
Q 013016          401 ADVKTHPFF  409 (451)
Q Consensus       401 ~ell~hp~~  409 (451)
                      .+|++||||
T Consensus       248 ~~vl~~~~~  256 (256)
T cd08218         248 NSILEKNFI  256 (256)
T ss_pred             HHHhhCcCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-43  Score=333.94  Aligned_cols=260  Identities=29%  Similarity=0.439  Sum_probs=215.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|++|.||+|.+..+++         .||+|++....  .......+..|+.+++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   69 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQ---------VVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFL   69 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCe---------EEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEE
Confidence            368899999999999999999887655         49999987542  2233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ++..+|+|+||+++++|.+++...   .+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~  146 (274)
T cd06609          70 KGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSG  146 (274)
T ss_pred             ECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccce
Confidence            999999999999999999998764   68999999999999999999999999999999999999999999999999975


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|+..|+|||.+.
T Consensus       147 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~~~  171 (274)
T cd06609         147 QLTSTM-------------------------------------------------------SKRNTFVGTPFWMAPEVIK  171 (274)
T ss_pred             eecccc-------------------------------------------------------cccccccCCccccChhhhc
Confidence            332110                                                       0111236788899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+.........   ....+..+.+++.+||..||++||+    
T Consensus       172 ~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~p~~Rpt----  244 (274)
T cd06609         172 QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE---GNKFSKPFKDFVSLCLNKDPKERPS----  244 (274)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc---ccccCHHHHHHHHHHhhCChhhCcC----
Confidence            988999999999999999999999999877666555555544322211   1113448999999999999999999    


Q ss_pred             hHHHHcCCCcCCCCcc
Q 013016          400 AADVKTHPFFKGLNFA  415 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~  415 (451)
                      ++++++||||++....
T Consensus       245 ~~~il~~~~~~~~~~~  260 (274)
T cd06609         245 AKELLKHKFIKKAKKT  260 (274)
T ss_pred             HHHHhhChhhcCCCcc
Confidence            9999999999985543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=8.2e-43  Score=330.65  Aligned_cols=256  Identities=38%  Similarity=0.710  Sum_probs=213.9

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||.|++|.||+|.+....+         .||+|++.+...........+..|+.+++.++|+||+++++.+.+++..|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   71 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNR---------TFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYML   71 (262)
T ss_pred             CCCCCceEEEEEEECCCCc---------EEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEE
Confidence            6999999999999876554         4999999876544445556788899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||+++++|.+++...  ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++......   
T Consensus        72 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~---  146 (262)
T cd05572          72 MEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG---  146 (262)
T ss_pred             EecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc---
Confidence            9999999999998765  44899999999999999999999999999999999999999999999999997432110   


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                                                                           .......|+..|++||.+.+..++.++
T Consensus       147 -----------------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~  173 (262)
T cd05572         147 -----------------------------------------------------QKTWTFCGTPEYVAPEIILNKGYDFSV  173 (262)
T ss_pred             -----------------------------------------------------cccccccCCcCccChhHhcCCCCCChh
Confidence                                                                 011123678889999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhc--CCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHH
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPS--NETTLRNIVK--KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAAD  402 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~--~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~e  402 (451)
                      |+||||+++|+|++|..||....  ....+..+..  ....++...     +.++.++|.+||+.||++||++ +..++|
T Consensus       174 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~~~p~~R~~~~~~~~~~  248 (262)
T cd05572         174 DYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYI-----DKAAKDLIKQLLRRNPEERLGNLKGGIKD  248 (262)
T ss_pred             hhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCccc-----CHHHHHHHHHHccCChhhCcCCcccCHHH
Confidence            99999999999999999998766  5556666663  223333222     3489999999999999999994 444899


Q ss_pred             HHcCCCcCCCCcc
Q 013016          403 VKTHPFFKGLNFA  415 (451)
Q Consensus       403 ll~hp~~~~~~~~  415 (451)
                      +++||||++.+|.
T Consensus       249 l~~~~~~~~~~~~  261 (262)
T cd05572         249 IKKHKWFNGFDWE  261 (262)
T ss_pred             HhcChhhhCCCCC
Confidence            9999999987764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.2e-42  Score=336.12  Aligned_cols=259  Identities=25%  Similarity=0.365  Sum_probs=211.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+|.+.+.||+|++|.||+|.+..+++         .||+|.+......   ....+..|+.+++.+.|+||+++++.+
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~   86 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQ---------EVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSY   86 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCc---------EEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3689999999999999999999876655         3999998754322   235566799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ....+.|+||||++|++|.+++..   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        87 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~  163 (296)
T cd06654          87 LVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC  163 (296)
T ss_pred             EeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence            999999999999999999998865   34889999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                       ........|++.|+|||.+
T Consensus       164 ~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~  188 (296)
T cd06654         164 AQITPE-------------------------------------------------------QSKRSTMVGTPYWMAPEVV  188 (296)
T ss_pred             hhcccc-------------------------------------------------------ccccCcccCCccccCHHHH
Confidence            421100                                                       0000123688899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|||||||++|+|++|+.||...........+..... .+..... ..+..+.+|+.+||..||++||+   
T Consensus       189 ~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~~li~~~l~~~p~~Rpt---  263 (296)
T cd06654         189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPE-KLSAIFRDFLNRCLDMDVEKRGS---  263 (296)
T ss_pred             cCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC-CCCCCcc-ccCHHHHHHHHHHCcCCcccCcC---
Confidence            988889999999999999999999999987766544443333221 1111122 23347999999999999999999   


Q ss_pred             ChHHHHcCCCcCCCC
Q 013016          399 GAADVKTHPFFKGLN  413 (451)
Q Consensus       399 ~~~ell~hp~~~~~~  413 (451)
                       +.++++||||...+
T Consensus       264 -~~eil~~~~~~~~~  277 (296)
T cd06654         264 -AKELLQHQFLKIAK  277 (296)
T ss_pred             -HHHHhhChhhhccC
Confidence             99999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.3e-43  Score=332.90  Aligned_cols=256  Identities=27%  Similarity=0.404  Sum_probs=206.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.++.+++         .||+|++.....   .....+..|+.++++++|+||+++++++.
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~   76 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGE---------LAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYL   76 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCe---------EEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEE
Confidence            679999999999999999999876655         499999874421   22345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~  154 (267)
T cd06646          77 SREKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAA  154 (267)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccce
Confidence            999999999999999999988754  468999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||.+.
T Consensus       155 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         155 KITAT-------------------------------------------------------IAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             eeccc-------------------------------------------------------ccccCccccCccccCHhHcc
Confidence            22100                                                       00011236888999999985


Q ss_pred             ---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 ---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                         ...++.++|||||||++|+|++|+.||...........+.......+........+..+.+||++||+.||++||+ 
T Consensus       180 ~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~-  258 (267)
T cd06646         180 VEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT-  258 (267)
T ss_pred             cccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC-
Confidence               3447889999999999999999999997655444433333333222222111223448999999999999999999 


Q ss_pred             CCChHHHHcCCC
Q 013016          397 KRGAADVKTHPF  408 (451)
Q Consensus       397 ~~~~~ell~hp~  408 (451)
                         +++|++|+|
T Consensus       259 ---~~~il~~l~  267 (267)
T cd06646         259 ---AERLLTHLF  267 (267)
T ss_pred             ---HHHHhcCCC
Confidence               999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.2e-42  Score=337.26  Aligned_cols=266  Identities=21%  Similarity=0.280  Sum_probs=203.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccC-------CCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQD-------RGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv  152 (451)
                      ++|.+.++||+|+||.||+|.+.......       .....+..||+|++....  .......+.+|+.++.+++|+||+
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence            67999999999999999999876543210       112233469999997542  223345677899999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP-----------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYR  215 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~  215 (451)
                      ++++++...+..|+||||+++++|.+++....                 ...+++..+..++.||+.||.|||++||+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~  162 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR  162 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999999999999999999999999886532                 1246888999999999999999999999999


Q ss_pred             cCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccc
Q 013016          216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV  295 (451)
Q Consensus       216 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (451)
                      ||||+|||++.++.+||+|||++.......                                                  
T Consensus       163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~--------------------------------------------------  192 (304)
T cd05096         163 DLATRNCLVGENLTIKIADFGMSRNLYAGD--------------------------------------------------  192 (304)
T ss_pred             CcchhheEEcCCccEEECCCccceecccCc--------------------------------------------------
Confidence            999999999999999999999974221100                                                  


Q ss_pred             cccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhc---CCCCCCCCCC
Q 013016          296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY--GRTPFAAPSNETTLRNIVK---KPLTFPTQSP  370 (451)
Q Consensus       296 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~  370 (451)
                         .........++..|+|||++.+..++.++|||||||++|+|++  +..||......+.+..+..   ..........
T Consensus       193 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (304)
T cd05096         193 ---YYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR  269 (304)
T ss_pred             ---eeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence               0001112356778999999988889999999999999999987  6778887666655444322   1111000111


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      +...+..+.+|+.+||+.||++|||    +.+|.
T Consensus       270 ~~~~~~~~~~li~~cl~~~p~~RPs----~~~i~  299 (304)
T cd05096         270 PPPCPQGLYELMLQCWSRDCRERPS----FSDIH  299 (304)
T ss_pred             CCCCCHHHHHHHHHHccCCchhCcC----HHHHH
Confidence            1223448999999999999999999    88884

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=9.5e-43  Score=331.03  Aligned_cols=260  Identities=28%  Similarity=0.403  Sum_probs=210.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH------HHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE------KKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      +|.+...||.|++|.||+|.+....+         .||+|.+......      .......+..|+.++++++|+||+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~---------~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGE---------LMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQY   71 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCc---------EEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            37788899999999999999876654         3999988643221      22344667789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++...++.++||||+++++|.+++...  +.+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|
T Consensus        72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~d  149 (267)
T cd06628          72 LGSSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISD  149 (267)
T ss_pred             EEEEEeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecc
Confidence            99999999999999999999999999765  4589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||.+.........                                                 .........+.|+..|+|
T Consensus       150 fg~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~y~~  180 (267)
T cd06628         150 FGISKKLEANSLS-------------------------------------------------TKTNGARPSLQGSVFWMA  180 (267)
T ss_pred             cCCCccccccccc-------------------------------------------------CCccccccccCCCcCccC
Confidence            9997533210000                                                 000001113468889999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||.+.+..++.++|||||||++|+|++|+.||........+.++..... ..+     ...+.++.++|.+||+.||.+|
T Consensus       181 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R  255 (267)
T cd06628         181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIP-----SNISSEAIDFLEKTFEIDHNKR  255 (267)
T ss_pred             hhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCC-----cccCHHHHHHHHHHccCCchhC
Confidence            9999988899999999999999999999999988766555555444321 111     1233489999999999999999


Q ss_pred             CCCCCChHHHHcCCCc
Q 013016          394 LGSKRGAADVKTHPFF  409 (451)
Q Consensus       394 pt~~~~~~ell~hp~~  409 (451)
                      |+    +.++++||||
T Consensus       256 p~----~~~il~~~~~  267 (267)
T cd06628         256 PT----AAELLKHPFL  267 (267)
T ss_pred             cC----HHHHhhCCCC
Confidence            99    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=4.4e-43  Score=331.73  Aligned_cols=253  Identities=34%  Similarity=0.636  Sum_probs=212.1

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|+||.||+|.+..+++         .||+|++.+...........+..|++++++++||||+++++++..
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   71 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKK---------MFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD   71 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCc---------EEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC
Confidence            48999999999999999999876655         399999987655444566788889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      +++.|+|+||+.|++|.+++...  ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus        72 ~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~  149 (258)
T cd05578          72 EENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATK  149 (258)
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccc
Confidence            99999999999999999998765  4689999999999999999999999999999999999999999999999998742


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                        ......|+..|+|||.+.+
T Consensus       150 ~~~~~--------------------------------------------------------~~~~~~~~~~y~~PE~~~~  173 (258)
T cd05578         150 VTPDT--------------------------------------------------------LTTSTSGTPGYMAPEVLCR  173 (258)
T ss_pred             cCCCc--------------------------------------------------------cccccCCChhhcCHHHHcc
Confidence            21100                                                        0012357788999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      ..++.++|+||||+++|+|++|+.||.....   ..............+.     ..+.++.++|.+||+.||.+||+  
T Consensus       174 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~--  246 (258)
T cd05578         174 QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA-----TWSTEAIDAINKLLERDPQKRLG--  246 (258)
T ss_pred             cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcc-----cCcHHHHHHHHHHccCChhHcCC--
Confidence            8899999999999999999999999987664   3333222222222222     23348999999999999999999  


Q ss_pred             CCh--HHHHcCCCc
Q 013016          398 RGA--ADVKTHPFF  409 (451)
Q Consensus       398 ~~~--~ell~hp~~  409 (451)
                        +  .|+++||||
T Consensus       247 --~~~~~l~~~~~~  258 (258)
T cd05578         247 --DNLKDLKNHPYF  258 (258)
T ss_pred             --ccHHHHhcCCCC
Confidence              7  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=7.4e-43  Score=335.29  Aligned_cols=242  Identities=17%  Similarity=0.214  Sum_probs=201.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe----C
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA----S  161 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~----~  161 (451)
                      ..||+|++|.||+|.+.+.           .||||++...........+.+.+|+.++++++||||+++++++.+    .
T Consensus        26 ~~i~~g~~~~v~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~   94 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNK-----------EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL   94 (283)
T ss_pred             eEEeeCCceEEEEEEECCE-----------EEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCC
Confidence            5789999999999998543           399999986544344445677889999999999999999999876    4


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ..+++||||++||+|.+++...  ..+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~  172 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKI  172 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhh
Confidence            5789999999999999998765  458999999999999999999998 5999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                          .....|+..|+|||++.+
T Consensus       173 ~~~~----------------------------------------------------------~~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        173 LSSP----------------------------------------------------------PFKNVNFMVYFSYKMLND  194 (283)
T ss_pred             hccc----------------------------------------------------------cccccCcccccCHHHhhh
Confidence            2110                                                          001267889999999976


Q ss_pred             --CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          321 --GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       321 --~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                        ..++.++|||||||++|||++|+.||......+....+......++..   ...+..+.+|+.+||+.||++|||   
T Consensus       195 ~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps---  268 (283)
T PHA02988        195 IFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP---LDCPLEIKCIVEACTSHDSIKRPN---  268 (283)
T ss_pred             ccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC---CcCcHHHHHHHHHHhcCCcccCcC---
Confidence              678999999999999999999999999888777777776554333321   123448999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.||++
T Consensus       269 -~~ell~  274 (283)
T PHA02988        269 -IKEILY  274 (283)
T ss_pred             -HHHHHH
Confidence             888874

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.1e-43  Score=351.02  Aligned_cols=264  Identities=17%  Similarity=0.272  Sum_probs=205.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      ....++|++.+.||+|+||.||+|.+...+..    .....||+|++.....  ......+..|+.+++.+ +|+||+++
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKE----DNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcc----cccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeE
Confidence            33446799999999999999999997654432    1223599999975432  22345677899999999 89999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC--------------------------------------------------
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------------------------------------------  184 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------------------------------------------  184 (451)
                      +++|...+..|+|||||++|+|.+++....                                                  
T Consensus       108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (374)
T cd05106         108 LGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV  187 (374)
T ss_pred             eeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence            999999999999999999999999875421                                                  


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCC
Q 013016          185 ------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       185 ------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  246 (451)
                                        ..++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~-  266 (374)
T cd05106         188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS-  266 (374)
T ss_pred             cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc-
Confidence                              1347889999999999999999999999999999999999999999999999974321100 


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA  326 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  326 (451)
                                                                          .........++..|||||++.+..++.+
T Consensus       267 ----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~  294 (374)
T cd05106         267 ----------------------------------------------------NYVVKGNARLPVKWMAPESIFDCVYTVQ  294 (374)
T ss_pred             ----------------------------------------------------ceeeccCCCCccceeCHHHhcCCCCCcc
Confidence                                                                0000011235667999999998889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          327 VDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       327 ~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +|||||||++|+|++ |+.||........+..+.........   +...+.++.+++.+||+.||.+||+    +.+|++
T Consensus       295 ~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs----~~~l~~  367 (374)
T cd05106         295 SDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR---PDFAPPEIYSIMKMCWNLEPTERPT----FSQISQ  367 (374)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC---CCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            999999999999997 99999876555444444443222111   1123348999999999999999999    888864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-44  Score=352.30  Aligned_cols=252  Identities=26%  Similarity=0.366  Sum_probs=222.5

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.-++.||.|+||-||.|++..+..         +||||.+...-....+..+++..|+.+|+++.|||++.+.|+|..+
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~e---------vVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre   98 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE   98 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccc---------eeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc
Confidence            7788899999999999999987765         5999999876666677888999999999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ...||||||| -||-.|++.-.+ +++.+..+..|+.+.+.||+|||+.+.||||||..|||+++.|.|||+|||.|.. 
T Consensus        99 ~TaWLVMEYC-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi-  175 (948)
T KOG0577|consen   99 HTAWLVMEYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASI-  175 (948)
T ss_pred             chHHHHHHHH-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhh-
Confidence            9999999999 788888887664 5699999999999999999999999999999999999999999999999998732 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC-
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG-  320 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  320 (451)
                                                                                ..-.++|+|||.|||||+|+. 
T Consensus       176 ----------------------------------------------------------~~PAnsFvGTPywMAPEVILAM  197 (948)
T KOG0577|consen  176 ----------------------------------------------------------MAPANSFVGTPYWMAPEVILAM  197 (948)
T ss_pred             ----------------------------------------------------------cCchhcccCCccccchhHheec
Confidence                                                                      223346899999999999864 


Q ss_pred             --CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          321 --GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       321 --~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                        +.|+-++||||||++..||...++|+..++....+..|.... +.++    .+.++..++.||..||.+-|.+|||  
T Consensus       198 DEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq----s~eWS~~F~~Fvd~CLqKipqeRpt--  271 (948)
T KOG0577|consen  198 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ----SNEWSDYFRNFVDSCLQKIPQERPT--  271 (948)
T ss_pred             cccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC----CchhHHHHHHHHHHHHhhCcccCCc--
Confidence              679999999999999999999999999988888877776654 3333    2334458999999999999999999  


Q ss_pred             CChHHHHcCCCcCC
Q 013016          398 RGAADVKTHPFFKG  411 (451)
Q Consensus       398 ~~~~ell~hp~~~~  411 (451)
                        .+++|+|+|...
T Consensus       272 --se~ll~H~fv~R  283 (948)
T KOG0577|consen  272 --SEELLKHRFVLR  283 (948)
T ss_pred             --HHHHhhcchhcc
Confidence              999999999987

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-42  Score=327.54  Aligned_cols=257  Identities=31%  Similarity=0.436  Sum_probs=211.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||.||+|.+..+.+         .+|+|++.....   .....+..|+.++++++|+||+++++++.
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   70 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGE---------LVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYL   70 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCC---------EEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEE
Confidence            679999999999999999999876654         399999975532   24466778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.+|++|||+++++|.+++.... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~l~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~  149 (262)
T cd06613          71 RRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSA  149 (262)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccch
Confidence            9999999999999999999887642 458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||.+.
T Consensus       150 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~~Pe~~~  174 (262)
T cd06613         150 QLTAT-------------------------------------------------------IAKRKSFIGTPYWMAPEVAA  174 (262)
T ss_pred             hhhhh-------------------------------------------------------hhccccccCCccccCchhhc
Confidence            22100                                                       00111236788899999998


Q ss_pred             CC---CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 GG---SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ~~---~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.   .++.++|||||||++|+|++|+.||...........+.......+........+.++.+|+.+||..||..||+ 
T Consensus       175 ~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-  253 (262)
T cd06613         175 VERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT-  253 (262)
T ss_pred             ccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC-
Confidence            76   78899999999999999999999998877666555554443322221122223447899999999999999999 


Q ss_pred             CCChHHHHcCCC
Q 013016          397 KRGAADVKTHPF  408 (451)
Q Consensus       397 ~~~~~ell~hp~  408 (451)
                         +.+++.|+|
T Consensus       254 ---~~~il~~~~  262 (262)
T cd06613         254 ---ATKLLQHPF  262 (262)
T ss_pred             ---HHHHhcCCC
Confidence               999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1e-42  Score=333.42  Aligned_cols=254  Identities=32%  Similarity=0.612  Sum_probs=199.9

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHH---HHHHHHCCCCCccceeEEEEeCCe
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME---KKILKMLDHPFLPTLYAEFEASNF  163 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~h~nIv~l~~~~~~~~~  163 (451)
                      .||+|+||.||+|.+..+++         .||+|++.+..............|   +.+++...|+||+.+++++...+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   71 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGK---------MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK   71 (278)
T ss_pred             CcccCCCeEEEEEEEecCCC---------EEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCE
Confidence            38999999999999876655         499999876533222211122223   344555689999999999999999


Q ss_pred             EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCC
Q 013016          164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA  243 (451)
Q Consensus       164 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  243 (451)
                      .|+||||+.|++|.+++...  +.+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.....
T Consensus        72 ~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~  149 (278)
T cd05606          72 LSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  149 (278)
T ss_pred             EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc
Confidence            99999999999999888654  5699999999999999999999999999999999999999999999999999742110


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC-C
Q 013016          244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-S  322 (451)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~  322 (451)
                                                                               .......|+..|+|||.+.++ .
T Consensus       150 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~  172 (278)
T cd05606         150 ---------------------------------------------------------KKPHASVGTHGYMAPEVLQKGVA  172 (278)
T ss_pred             ---------------------------------------------------------cCCcCcCCCcCCcCcHHhcCCCC
Confidence                                                                     000123688999999999754 5


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC-----
Q 013016          323 HGNAVDWWAFGIFIYEMIYGRTPFAAPS---NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-----  394 (451)
Q Consensus       323 ~~~~~DIwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp-----  394 (451)
                      ++.++||||+||++|+|++|+.||....   .......+.......+.     ..+.++.+++.+||..||.+|+     
T Consensus       173 ~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~li~~~l~~~p~~R~~~~~~  247 (278)
T cd05606         173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD-----SFSPELRSLLEGLLQRDVNRRLGCLGR  247 (278)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCC-----cCCHHHHHHHHHHhhcCHHhccCCCCC
Confidence            8999999999999999999999998652   22222222222222222     2244899999999999999999     


Q ss_pred             CCCCChHHHHcCCCcCCCCcccc
Q 013016          395 GSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      +    +.++++||||+.++|...
T Consensus       248 ~----~~~ll~~~~~~~~~~~~~  266 (278)
T cd05606         248 G----AQEVKEHPFFRSLDWQMV  266 (278)
T ss_pred             C----HHHHHhCccccCCCchHh
Confidence            8    999999999999988765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-44  Score=321.79  Aligned_cols=254  Identities=29%  Similarity=0.479  Sum_probs=217.8

Q ss_pred             CCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           80 RDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      ++|.+. ++||-|-.|.|-.|..+.++++         +|+|++...        .+..+|+++.... .|+|||.++++
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ek---------fALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidV  123 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEK---------FALKVLLDS--------PKARREVELHWMASGHPHIVSIIDV  123 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhh---------hHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehh
Confidence            678775 4699999999999999988875         999998633        2223466665444 69999999999


Q ss_pred             EEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CCCE
Q 013016          158 FEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHI  230 (451)
Q Consensus       158 ~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~~~  230 (451)
                      |+.    ...+.+|||.++||.|..-+.......|++.++..|++||..|+.|||+.+|.||||||+|+|.+.   |-.+
T Consensus       124 yeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~l  203 (400)
T KOG0604|consen  124 YENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPL  203 (400)
T ss_pred             hhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcce
Confidence            864    357889999999999999999988888999999999999999999999999999999999999985   4479


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||+|+.....                                                        ..-.+-|-|+
T Consensus       204 KLtDfGFAK~t~~~--------------------------------------------------------~~L~TPc~TP  227 (400)
T KOG0604|consen  204 KLTDFGFAKETQEP--------------------------------------------------------GDLMTPCFTP  227 (400)
T ss_pred             EecccccccccCCC--------------------------------------------------------ccccCCcccc
Confidence            99999999643210                                                        0111237899


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      .|.|||++....|+...|+||+||+||-||+|.+||....    .-.+..+|..+...+|...|+.+++ .++++|+.+|
T Consensus       228 yYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe-~aKdlIR~LL  306 (400)
T KOG0604|consen  228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSE-AAKDLIRKLL  306 (400)
T ss_pred             cccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHH-HHHHHHHHHh
Confidence            9999999998899999999999999999999999998754    3457788999999999998888777 8999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ..+|.+|.|    +.++++|||+.+
T Consensus       307 kt~PteRlT----I~~~m~hpwi~~  327 (400)
T KOG0604|consen  307 KTEPTERLT----IEEVMDHPWINQ  327 (400)
T ss_pred             cCCchhhee----HHHhhcCchhcc
Confidence            999999999    999999999998

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.1e-42  Score=334.39  Aligned_cols=258  Identities=27%  Similarity=0.382  Sum_probs=212.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|++.+.||.|++|.||+|.+..+++         .||+|.+.....   .....+..|+.+++.++|+||+++++++.
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQ---------EVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFL   86 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCc---------EEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEe
Confidence            579999999999999999999876665         399999875422   23455677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++..   ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~  163 (296)
T cd06655          87 VGDELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCA  163 (296)
T ss_pred             cCceEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccch
Confidence            99999999999999999998865   348999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||.+.
T Consensus       164 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  188 (296)
T cd06655         164 QITPE-------------------------------------------------------QSKRSTMVGTPYWMAPEVVT  188 (296)
T ss_pred             hcccc-------------------------------------------------------cccCCCcCCCccccCcchhc
Confidence            22100                                                       00011236888999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||........+..+....... ... +...+..+.+||.+||..||.+||+    
T Consensus       189 ~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~~l~~dp~~Rpt----  262 (296)
T cd06655         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE-LQN-PEKLSPIFRDFLNRCLEMDVEKRGS----  262 (296)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcc-cCC-cccCCHHHHHHHHHHhhcChhhCCC----
Confidence            8889999999999999999999999998877666555554332111 111 1223348999999999999999999    


Q ss_pred             hHHHHcCCCcCCCC
Q 013016          400 AADVKTHPFFKGLN  413 (451)
Q Consensus       400 ~~ell~hp~~~~~~  413 (451)
                      +.+++.||||+...
T Consensus       263 ~~~il~~~~~~~~~  276 (296)
T cd06655         263 AKELLQHPFLKLAK  276 (296)
T ss_pred             HHHHhhChHhhhcc
Confidence            99999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-43  Score=334.70  Aligned_cols=260  Identities=27%  Similarity=0.434  Sum_probs=214.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||.|+||.||+|.+..+..         .+|+|++....   ......+..|+.++++++|+||+++++.+.
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGL---------FAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYF   72 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCc---------EEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEe
Confidence            679999999999999999999876554         49999987442   233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~  151 (280)
T cd06611          73 YENKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSA  151 (280)
T ss_pred             cCCeEEEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccch
Confidence            9999999999999999999887642 459999999999999999999999999999999999999999999999999863


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       .........|+..|+|||++.
T Consensus       152 ~~~~-------------------------------------------------------~~~~~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         152 KNKS-------------------------------------------------------TLQKRDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             hhcc-------------------------------------------------------cccccceeecchhhcCHHHHh
Confidence            2110                                                       000111246888999999975


Q ss_pred             -----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          320 -----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       320 -----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                           +..++.++|||||||++|+|++|+.||........+..+.......  ...+...+.++.++|.+||..||.+||
T Consensus       177 ~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (280)
T cd06611         177 CETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPT--LDQPSKWSSSFNDFLKSCLVKDPDDRP  254 (280)
T ss_pred             hcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCC--cCCcccCCHHHHHHHHHHhccChhhCc
Confidence                 3446789999999999999999999998877777666665543221  111223344899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCC
Q 013016          395 GSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~  413 (451)
                      +    +.++++||||.+..
T Consensus       255 s----~~~il~~~~~~~~~  269 (280)
T cd06611         255 T----AAELLKHPFVSDQS  269 (280)
T ss_pred             C----HHHHhcChhhcccc
Confidence            9    99999999999853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-44  Score=324.44  Aligned_cols=267  Identities=30%  Similarity=0.447  Sum_probs=219.8

Q ss_pred             ceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEE
Q 013016           82 FDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFE  159 (451)
Q Consensus        82 y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~  159 (451)
                      |++. +.||+|+|+.|-.|....++.+         ||||++.+....   ...++.+|++++.+.+ |+||+.++++|+
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~E---------YAVKiidKq~gH---sR~RvfREVe~f~~Cqgh~nilqLiefFE  146 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKE---------YAVKIIDKQPGH---SRSRVFREVETFYQCQGHKNILQLIEFFE  146 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchh---------hhhhhhhcCCch---HHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence            5553 4699999999999998877765         999999987332   3356677999999985 999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~kl~Dfg  236 (451)
                      ++..+|||||.|.||+|...+...  +.|++..+.+++++|+.||.|||.+||.||||||+|||-....   -+|||||.
T Consensus       147 dd~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD  224 (463)
T KOG0607|consen  147 DDTRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFD  224 (463)
T ss_pred             ccceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccc
Confidence            999999999999999999988876  4599999999999999999999999999999999999998665   48999998


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +..-.....                                     .-....+|           .-.+.+|+..|||||
T Consensus       225 LgSg~k~~~-------------------------------------~~spastP-----------~L~tPvGSAEfMAPE  256 (463)
T KOG0607|consen  225 LGSGIKLNN-------------------------------------DCSPASTP-----------ELLTPVGSAEFMAPE  256 (463)
T ss_pred             cccccccCC-------------------------------------CCCCCCCc-----------cccCcccchhhcchh
Confidence            862110000                                     00000000           011348999999999


Q ss_pred             ccc---C--CCCCcchhHHHHHHHHHHHHhCCCCCCCCC---------------hHHHHHHHhcCCCCCCCCCCCCcChH
Q 013016          317 VAS---G--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETTLRNIVKKPLTFPTQSPSSMSEY  376 (451)
Q Consensus       317 ~~~---~--~~~~~~~DIwSlG~il~elltg~~pf~~~~---------------~~~~~~~i~~~~~~~~~~~~~~~~~~  376 (451)
                      ++.   +  ..|+.+.|.||||+|||-||.|.+||.+.-               ....+..|..+...+|...|--+.+ 
T Consensus       257 VVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~-  335 (463)
T KOG0607|consen  257 VVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISS-  335 (463)
T ss_pred             HHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhH-
Confidence            863   2  347999999999999999999999997531               3467899999999999998877766 


Q ss_pred             HHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       377 ~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ++++++..+|-.|+..|.+    +.++++|||++..-..
T Consensus       336 eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  336 EAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAPE  370 (463)
T ss_pred             HHHHHHHHHHhccHHhhhh----hhhccCCccccccchh
Confidence            8999999999999999999    9999999999995443

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=9.2e-43  Score=329.87  Aligned_cols=265  Identities=38%  Similarity=0.678  Sum_probs=217.7

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||.|+||.||+|.+..+++         .+|+|++.............+..|+.++++++|+||+++++.+...+..|+|
T Consensus         1 lg~g~~~~vy~~~~~~~~~---------~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   71 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGD---------IYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLV   71 (265)
T ss_pred             CCCCCceEEEEEEECCCCC---------EEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEE
Confidence            6899999999999886554         4999999876555556667788899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||+++++|.+++....  .+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus        72 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          72 MEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence            99999999999988753  6899999999999999999999999999999999999999999999999997432111000


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                      ..                                               ...........++..|+|||.+.+..++.++
T Consensus       150 ~~-----------------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  182 (265)
T cd05579         150 NL-----------------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTV  182 (265)
T ss_pred             cc-----------------------------------------------ccccccccCcccCccccCHHHhcCCCCCcch
Confidence            00                                               0000111224678889999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCC
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP  407 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp  407 (451)
                      ||||||+++|+|++|..||......+.+..+..+...++....   .+..+.+|+.+||+.+|.+|||+.. +.++|+||
T Consensus       183 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~~~p~~Rpt~~~-~~~~l~~~  258 (265)
T cd05579         183 DWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVE---VSDEAIDLISKLLVPDPEKRLGAKS-IEEIKNHP  258 (265)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcccc---CCHHHHHHHHHHhcCCHhhcCCCcc-HHHHhcCc
Confidence            9999999999999999999988888888777765554443221   2448999999999999999999111 29999999


Q ss_pred             CcCCCCc
Q 013016          408 FFKGLNF  414 (451)
Q Consensus       408 ~~~~~~~  414 (451)
                      ||++++|
T Consensus       259 ~~~~~~~  265 (265)
T cd05579         259 FFKGIDW  265 (265)
T ss_pred             cccCCCC
Confidence            9999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.3e-42  Score=328.14  Aligned_cols=262  Identities=25%  Similarity=0.355  Sum_probs=208.8

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH---HHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV---LEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      +|.+.+.||.|+||.||+|....+.          .+|+|++....   .........+.+|+.+++.++|+||++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   70 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQ----------LIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGT   70 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCC----------eEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeE
Confidence            4788899999999999999764322          39999886432   1223344567889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+.+..|+||||++|++|.+++...  ..+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  148 (265)
T cd06631          71 CLDDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGC  148 (265)
T ss_pred             eecCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchh
Confidence            99999999999999999999998764  4589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +...........                                                 .........|+..|+|||+
T Consensus       149 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~pe~  179 (265)
T cd06631         149 ARRLAWVGLHGT-------------------------------------------------HSNMLKSMHGTPYWMAPEV  179 (265)
T ss_pred             hHhhhhcccccc-------------------------------------------------ccccccccCCCccccChhh
Confidence            743211000000                                                 0000112368889999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||...........+.......+.  .+...+..+.+++.+||..+|.+||+  
T Consensus       180 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~--  255 (265)
T cd06631         180 INESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR--LPDSFSAAAIDFVTSCLTRDQHERPS--  255 (265)
T ss_pred             hcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC--CCCCCCHHHHHHHHHHhcCCcccCCC--
Confidence            99888999999999999999999999999876655544444433221111  11224448999999999999999999  


Q ss_pred             CChHHHHcCCCc
Q 013016          398 RGAADVKTHPFF  409 (451)
Q Consensus       398 ~~~~ell~hp~~  409 (451)
                        +.+++.||||
T Consensus       256 --~~~~l~~~~~  265 (265)
T cd06631         256 --ALQLLRHDFL  265 (265)
T ss_pred             --HHHHhcCCCC
Confidence              9999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.2e-42  Score=333.38  Aligned_cols=255  Identities=27%  Similarity=0.408  Sum_probs=205.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +.|++.+.||.|+||.||+|.+....+         .+|+|++....    .....+..|+.+++++ +|+||+++++++
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   82 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQ---------LAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAF   82 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCc---------EEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence            789999999999999999999876654         49999986542    2234566788889888 699999999998


Q ss_pred             E------eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 E------ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      .      ...+.|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|
T Consensus        83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            5      3468899999999999999998766667899999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                       ........|+..|
T Consensus       163 ~dfg~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y  187 (282)
T cd06636         163 VDFGVSAQLDRT-------------------------------------------------------VGRRNTFIGTPYW  187 (282)
T ss_pred             eeCcchhhhhcc-------------------------------------------------------ccCCCcccccccc
Confidence            999997422100                                                       0011124688899


Q ss_pred             cCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          313 VSPEVAS-----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       313 ~aPE~~~-----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +|||.+.     +..++.++|||||||++|+|++|..||...........+.....   ........+.++.+||.+||+
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~  264 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP---PKLKSKKWSKKFIDFIEGCLV  264 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC---CCCcccccCHHHHHHHHHHhC
Confidence            9999986     34578899999999999999999999987655444433332211   111122234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCc
Q 013016          388 KDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .||.+||+    +.|||+||||
T Consensus       265 ~~p~~Rp~----~~ell~~~~~  282 (282)
T cd06636         265 KNYLSRPS----TEQLLKHPFI  282 (282)
T ss_pred             CChhhCcC----HHHHhcCCCC
Confidence            99999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=8.6e-43  Score=334.31  Aligned_cols=262  Identities=21%  Similarity=0.324  Sum_probs=211.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+......    .....||+|.+....  .......+.+|+.+++.++|+||++++++
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   76 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNER----LSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGV   76 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCC----cceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEE
Confidence            447899999999999999999998765421    122359999987442  22334567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPH--------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      +...+..|++|||+++++|.+++.....              ..+++..++.++.||+.||.|||++|++|+||||+||+
T Consensus        77 ~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil  156 (283)
T cd05048          77 CTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCL  156 (283)
T ss_pred             EcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEE
Confidence            9999999999999999999999876421              45889999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.++|+|||++.......                                                     .....
T Consensus       157 ~~~~~~~~L~dfg~~~~~~~~~-----------------------------------------------------~~~~~  183 (283)
T cd05048         157 VGEGLTVKISDFGLSRDIYSAD-----------------------------------------------------YYRVQ  183 (283)
T ss_pred             EcCCCcEEECCCcceeeccccc-----------------------------------------------------ccccc
Confidence            9999999999999974221100                                                     00011


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+..+.....    +...+.++.+|+
T Consensus       184 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~l~  259 (283)
T cd05048         184 SKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPC----PEDCPARVYALM  259 (283)
T ss_pred             CCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC----cccCCHHHHHHH
Confidence            12256788999999988889999999999999999998 9999998887777777665543221    223345899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHcC
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+||+.||.+||+    +.||+++
T Consensus       260 ~~c~~~~p~~Rp~----~~~i~~~  279 (283)
T cd05048         260 IECWNEIPARRPR----FKDIHTR  279 (283)
T ss_pred             HHHccCChhhCcC----HHHHHHH
Confidence            9999999999999    9998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=3.9e-42  Score=324.79  Aligned_cols=256  Identities=29%  Similarity=0.409  Sum_probs=216.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|+||.||.+....+.+         .+++|.+...... ......+..|+.++++++|+||+++++++.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~---------~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   70 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDS---------LVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMD   70 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCc---------EEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEec
Confidence            58999999999999999999877655         3999988654322 2334566789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+.+++||||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++..
T Consensus        71 ~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~  150 (256)
T cd08221          71 DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKI  150 (256)
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEE
Confidence            99999999999999999999876556789999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                       .......|++.|+|||.+.+
T Consensus       151 ~~~~~-------------------------------------------------------~~~~~~~~~~~y~ape~~~~  175 (256)
T cd08221         151 LGSEY-------------------------------------------------------SMAETVVGTPYYMSPELCQG  175 (256)
T ss_pred             ccccc-------------------------------------------------------ccccccCCCccccCHhhcCC
Confidence            21100                                                       00112368889999999998


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++||||||+++|+|++|..||......+....+..+......    ...+.++.+++.+||..+|.+||+    +
T Consensus       176 ~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~s----~  247 (256)
T cd08221         176 VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV----SVYSSELISLVHSLLQQDPEKRPT----A  247 (256)
T ss_pred             CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc----cccCHHHHHHHHHHcccCcccCCC----H
Confidence            88899999999999999999999999987777777777765443222    223448999999999999999999    9


Q ss_pred             HHHHcCCCc
Q 013016          401 ADVKTHPFF  409 (451)
Q Consensus       401 ~ell~hp~~  409 (451)
                      .++++|+|+
T Consensus       248 ~~ll~~~~l  256 (256)
T cd08221         248 DEVLDQPLL  256 (256)
T ss_pred             HHHhhCcCC
Confidence            999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.4e-42  Score=335.53  Aligned_cols=266  Identities=27%  Similarity=0.353  Sum_probs=210.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +|.+.+.||.|++|.||+|.+..+++         .||||.+......  .......+..|+.+++.++|+||+++++++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~---------~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGR---------IVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF   71 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCc---------EEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee
Confidence            48889999999999999999877655         3999999765432  122334556789999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+.+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        72 ~~~~~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~  149 (298)
T cd07841          72 GHKSNINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLA  149 (298)
T ss_pred             ecCCEEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceee
Confidence            9999999999999 999999987653 36999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......++..|+|||.+
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~  174 (298)
T cd07841         150 RSFGSPN-------------------------------------------------------RKMTHQVVTRWYRAPELL  174 (298)
T ss_pred             eeccCCC-------------------------------------------------------ccccccccceeeeCHHHH
Confidence            5322110                                                       000112457789999998


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-----------------------CCCCCcC
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-----------------------QSPSSMS  374 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-----------------------~~~~~~~  374 (451)
                      .+ ..++.++|||||||++|+|++|..+|......+.+..+.........                       .......
T Consensus       175 ~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T cd07841         175 FGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAA  254 (298)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccc
Confidence            65 45789999999999999999998888876665555444332110000                       0000112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      +..+.+||.+||.+||.+||+    +.|++.|+||++...+.
T Consensus       255 ~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         255 SDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSNDPAPT  292 (298)
T ss_pred             cHHHHHHHHHHhcCCcccCcC----HHHHhhCccccCCCCCC
Confidence            347899999999999999999    99999999999955543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.4e-42  Score=329.95  Aligned_cols=264  Identities=24%  Similarity=0.357  Sum_probs=207.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH---HHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL---EKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      +|+..+.||+|++|.||+|.+..+++         .||+|++.....   ........+..|+.++++++|+||++++++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   71 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGT---------LMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGA   71 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCc---------EEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhce
Confidence            47888999999999999999876655         399999975431   112345677889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEeccC
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFD  236 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg  236 (451)
                      +.+.++.++||||++|++|.+++...  +.+++..++.++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||
T Consensus        72 ~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg  149 (268)
T cd06630          72 TCEDSHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFG  149 (268)
T ss_pred             eccCCeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccc
Confidence            99999999999999999999998764  4689999999999999999999999999999999999998776 59999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      .+.........                                                   .........|+..|+|||
T Consensus       150 ~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~~~~PE  178 (268)
T cd06630         150 AAARLAAKGTG---------------------------------------------------AGEFQGQLLGTIAFMAPE  178 (268)
T ss_pred             ccccccccccc---------------------------------------------------CCccccccccccceeCHh
Confidence            97433211000                                                   000112346888999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .+.+..++.++|||||||++|+|++|..||...........+............+...+.++.+++.+||..||.+||+ 
T Consensus       179 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~-  257 (268)
T cd06630         179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP-  257 (268)
T ss_pred             HhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC-
Confidence            9988889999999999999999999999997544322222222111001111111223348999999999999999999 


Q ss_pred             CCChHHHHcCCCcC
Q 013016          397 KRGAADVKTHPFFK  410 (451)
Q Consensus       397 ~~~~~ell~hp~~~  410 (451)
                         +.++++||||+
T Consensus       258 ---~~~ll~~~~~~  268 (268)
T cd06630         258 ---SRELLKHPVFR  268 (268)
T ss_pred             ---HHHHhcCcccC
Confidence               99999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3.5e-42  Score=331.67  Aligned_cols=257  Identities=28%  Similarity=0.384  Sum_probs=205.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .+|+|++....    .....+..|+.+++++ +|+||+++++++
T Consensus        22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~---------~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   88 (291)
T cd06639          22 DTWEIIETIGKGTYGKVYKVTNKKDGS---------LAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMF   88 (291)
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCC---------EEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence            789999999999999999999877665         39999986432    1224456688899988 799999999998


Q ss_pred             EeC-----CeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          159 EAS-----NFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       159 ~~~-----~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      ...     +..|+||||++|++|.++++..  ....+++..++.++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus        89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence            754     3689999999999999988642  345689999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.......                                                       .......|+..
T Consensus       169 l~dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  193 (291)
T cd06639         169 LVDFGVSAQLTSTR-------------------------------------------------------LRRNTSVGTPF  193 (291)
T ss_pred             Eeecccchhccccc-------------------------------------------------------ccccCccCCcc
Confidence            99999974321000                                                       00012357888


Q ss_pred             ccCcccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          312 YVSPEVASGG-----SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       312 y~aPE~~~~~-----~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      |+|||.+...     .++.++|||||||++|+|++|+.||........+..+........ ..... ....+.+||.+||
T Consensus       194 y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~l~~li~~~l  271 (291)
T cd06639         194 WMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTL-LHPEK-WCRSFNHFISQCL  271 (291)
T ss_pred             ccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCC-Ccccc-cCHHHHHHHHHHh
Confidence            9999998643     267899999999999999999999988766666666554432211 11112 2337999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcC
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~  410 (451)
                      +.||++||+    +.|++.||||+
T Consensus       272 ~~~p~~Rps----~~~il~~~~~~  291 (291)
T cd06639         272 IKDFEARPS----VTHLLEHPFIK  291 (291)
T ss_pred             hcChhhCcC----HHHHhcCcccC
Confidence            999999999    99999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2e-42  Score=331.84  Aligned_cols=258  Identities=28%  Similarity=0.399  Sum_probs=210.9

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|++.+.||.|+||.||+|.+...+.         .+|+|.+....   ......+..|+++++.++|+||+++++++..
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~---------~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~   73 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGV---------LAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYY   73 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCe---------EEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee
Confidence            37888999999999999999887654         48999986542   2334566779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..|+||||+++++|..++... ...+++..+..++.||+.||.|||+.|++||||||+|||++.++.++|+|||++..
T Consensus        74 ~~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~  152 (282)
T cd06643          74 ENNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAK  152 (282)
T ss_pred             CCEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccc
Confidence            99999999999999998877653 24689999999999999999999999999999999999999999999999999742


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc-
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS-  319 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-  319 (451)
                      ....                                                       ........|+..|+|||++. 
T Consensus       153 ~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~  177 (282)
T cd06643         153 NTRT-------------------------------------------------------IQRRDSFIGTPYWMAPEVVMC  177 (282)
T ss_pred             cccc-------------------------------------------------------ccccccccccccccCHhhccc
Confidence            1100                                                       00111246888999999984 


Q ss_pred             ----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          320 ----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       320 ----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                          +..++.++|||||||++|+|++|+.||......+....+........  ..+...+.++.+||.+||+.||.+||+
T Consensus       178 ~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~  255 (282)
T cd06643         178 ETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWT  255 (282)
T ss_pred             cCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC--CCccccCHHHHHHHHHHccCChhhCcC
Confidence                34578899999999999999999999988777666666655432211  112223448999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCC
Q 013016          396 SKRGAADVKTHPFFKGL  412 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~  412 (451)
                          +.++++||||+..
T Consensus       256 ----~~~il~~~~~~~~  268 (282)
T cd06643         256 ----TTQLLQHPFVTVN  268 (282)
T ss_pred             ----HHHHhcCCCEecc
Confidence                9999999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.2e-42  Score=333.52  Aligned_cols=259  Identities=29%  Similarity=0.400  Sum_probs=206.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|++|.||+|.++.+++         .||||.+..... .......+..|++++++++|+||+++++++.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   70 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGE---------VVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHT   70 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCC---------EEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhccc
Confidence            48899999999999999999876655         499999875432 22233567779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..++||||+ .++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++..
T Consensus        71 ~~~~~~v~e~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~  149 (284)
T cd07860          71 ENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA  149 (284)
T ss_pred             CCcEEEEeecc-ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhh
Confidence            99999999999 46899888776667799999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                       .......++..|+|||++.+
T Consensus       150 ~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         150 FGVPV-------------------------------------------------------RTYTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             cccCc-------------------------------------------------------cccccccccccccCCeEEec
Confidence            21100                                                       00001246778999999877


Q ss_pred             CC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC------------------CC------CCcCh
Q 013016          321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ------------------SP------SSMSE  375 (451)
Q Consensus       321 ~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~------------------~~------~~~~~  375 (451)
                      .. ++.++|||||||++|+|+||+.||...+....+.++..........                  ..      ....+
T Consensus       175 ~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
T cd07860         175 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLD  254 (284)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCC
Confidence            54 5889999999999999999999998876655544443321111000                  00      01123


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+++++|.+||+.||.+|||    ++++++||||
T Consensus       255 ~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f  284 (284)
T cd07860         255 EDGRDLLSQMLHYDPNKRIS----AKAALAHPFF  284 (284)
T ss_pred             HHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence            37889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-42  Score=333.80  Aligned_cols=259  Identities=27%  Similarity=0.400  Sum_probs=201.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|++.+.||.|++|.||+|.++.+++         .||||.+.....  ......+.+|+.++++++|+||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~---------~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   72 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQ---------LVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDII   72 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCc---------EEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEE
Confidence            3789999999999999999999876554         499999875421  11223355699999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+.++.|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  150 (291)
T cd07844          73 HTKKTLTLVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLA  150 (291)
T ss_pred             ecCCeEEEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccc
Confidence            99999999999996 58998887654 36899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......++..|+|||++
T Consensus       151 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~aPE~~  175 (291)
T cd07844         151 RAKSVPS-------------------------------------------------------KTYSNEVVTLWYRPPDVL  175 (291)
T ss_pred             cccCCCC-------------------------------------------------------ccccccccccccCCcHHh
Confidence            4211000                                                       000012467789999998


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCCCC-------------------CCC-------CC
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPLTF-------------------PTQ-------SP  370 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~-------------------~~~-------~~  370 (451)
                      .+ ..++.++|||||||++|+|++|+.||.... ..+.+..+.+.....                   ...       ..
T Consensus       176 ~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (291)
T cd07844         176 LGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHA  255 (291)
T ss_pred             hcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhC
Confidence            76 457899999999999999999999997654 233333222110000                   000       00


Q ss_pred             CCcC-hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          371 SSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       371 ~~~~-~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+. ..++.+++.+||+.||.+||+    +.|++.||||
T Consensus       256 ~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~~~f  291 (291)
T cd07844         256 PRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKHPYF  291 (291)
T ss_pred             cCCCCchhHHHHHHHHhccCcccccC----HHHHhcCCCC
Confidence            0111 137889999999999999999    9999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=9.8e-43  Score=334.57  Aligned_cols=262  Identities=26%  Similarity=0.392  Sum_probs=208.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||.||+|.+...+.         .||+|.+....  .......+.+|+.++++++|+||+++++.+.
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   69 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGV---------TMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFF   69 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCc---------EEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhhee
Confidence            368999999999999999999876654         49999886542  2233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..+.+|+||||++|++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||+
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~  149 (286)
T cd06622          70 IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGV  149 (286)
T ss_pred             cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence            9999999999999999998887632 2368999999999999999999996 5999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                         ......|+..|+|||.
T Consensus       150 ~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~  172 (286)
T cd06622         150 SGNLVAS---------------------------------------------------------LAKTNIGCQSYMAPER  172 (286)
T ss_pred             cccccCC---------------------------------------------------------ccccCCCccCccCcch
Confidence            7422100                                                         0012257788999999


Q ss_pred             ccCCC------CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          318 ASGGS------HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       318 ~~~~~------~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +.+..      ++.++|||||||++|+|++|+.||...........+.......+...... .+.++.+||.+||+.+|+
T Consensus       173 ~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~  251 (286)
T cd06622         173 IKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG-YSDDAQDFVAKCLNKIPN  251 (286)
T ss_pred             hcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc-cCHHHHHHHHHHcccCcc
Confidence            86543      47899999999999999999999976554443333222111111111222 344899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCCCc
Q 013016          392 NRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +||+    +++++.||||.....
T Consensus       252 ~Rp~----~~~l~~~~~~~~~~~  270 (286)
T cd06622         252 RRPT----YAQLLEHPWLVKYKN  270 (286)
T ss_pred             cCCC----HHHHhcChhhhhccC
Confidence            9999    999999999988543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.5e-42  Score=335.48  Aligned_cols=256  Identities=25%  Similarity=0.377  Sum_probs=209.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+...++         .||+|.+......   ..+.+..|+.+++.++|+||+++++++.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~---------~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~   86 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQ---------EVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL   86 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCC---------EEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            789999999999999999999876655         3999998754322   2345667899999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++.|+||||++|++|.+++..   ..+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++.
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~  163 (297)
T cd06656          87 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA  163 (297)
T ss_pred             cCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccce
Confidence            99999999999999999998865   348899999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|++.|+|||.+.
T Consensus       164 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  188 (297)
T cd06656         164 QITPEQ-------------------------------------------------------SKRSTMVGTPYWMAPEVVT  188 (297)
T ss_pred             EccCCc-------------------------------------------------------cCcCcccCCccccCHHHHc
Confidence            221000                                                       0001235788899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+....  .+....+...+..+.+|+.+||..||++||+    
T Consensus       189 ~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----  262 (297)
T cd06656         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPERLSAVFRDFLNRCLEMDVDRRGS----  262 (297)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC--CCCCCCccccCHHHHHHHHHHccCChhhCcC----
Confidence            8889999999999999999999999998765544333222221  1111112223447899999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      +.++++||||+.
T Consensus       263 ~~~il~~~~~~~  274 (297)
T cd06656         263 AKELLQHPFLKL  274 (297)
T ss_pred             HHHHhcCchhcc
Confidence            999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.5e-42  Score=331.60  Aligned_cols=256  Identities=27%  Similarity=0.398  Sum_probs=203.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||.||+|.++..++         .+|+|++....    .....+..|+.+++.+ +|+||+++++++
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~---------~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   84 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGS---------KAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMY   84 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCc---------eeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence            889999999999999999999877655         39999886432    1224456688999998 699999999988


Q ss_pred             E-----eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          159 E-----ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       159 ~-----~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      .     .++.+++||||++|++|.+++...  ....+++..+..++.|++.||.|||+++++||||||+||+++.++.++
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEE
Confidence            4     446799999999999999987642  235689999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.......                                                       .......|+..
T Consensus       165 l~dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  189 (286)
T cd06638         165 LVDFGVSAQLTSTR-------------------------------------------------------LRRNTSVGTPF  189 (286)
T ss_pred             EccCCceeecccCC-------------------------------------------------------CccccccCCCc
Confidence            99999974321100                                                       00112368899


Q ss_pred             ccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          312 YVSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       312 y~aPE~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      |+|||++.+     ..++.++|||||||++|+|++|+.||........+..+.....  +....+...+.++.+|+.+||
T Consensus       190 y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l  267 (286)
T cd06638         190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPP--PTLHQPELWSNEFNDFIRKCL  267 (286)
T ss_pred             ccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCC--CcccCCCCcCHHHHHHHHHHc
Confidence            999999753     4478899999999999999999999987665554444333221  111122233448999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      +.||++||+    +.||++|+||
T Consensus       268 ~~~p~~Rps----~~ell~~~~~  286 (286)
T cd06638         268 TKDYEKRPT----VSDLLQHVFI  286 (286)
T ss_pred             cCCcccCCC----HHHHhhcccC
Confidence            999999999    9999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=2.2e-42  Score=328.80  Aligned_cols=256  Identities=19%  Similarity=0.241  Sum_probs=206.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.++...+      .+..||+|++.....  ......+..|+.++++++||||+++++++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~------~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   75 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSK------RELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVI   75 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCC------ceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            3679999999999999999998764321      123599999976522  23345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+++.|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~  154 (266)
T cd05064          76 TRGNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRL  154 (266)
T ss_pred             ecCCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccc
Confidence            99999999999999999999987643 46899999999999999999999999999999999999999999999999986


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                      ........++..|+|||.+
T Consensus       155 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  180 (266)
T cd05064         155 QEDKSEA------------------------------------------------------IYTTMSGKSPVLWAAPEAI  180 (266)
T ss_pred             ccccccc------------------------------------------------------hhcccCCCCceeecCHHHH
Confidence            3210000                                                      0000012456789999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |+.||......+.+..+..+... +.   +...+..+.+++.+||+.+|.+||+  
T Consensus       181 ~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~li~~c~~~~p~~RP~--  254 (266)
T cd05064         181 QYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-PA---PRNCPNLLHQLMLDCWQKERGERPR--  254 (266)
T ss_pred             hhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-CC---CCCCCHHHHHHHHHHcCCCchhCCC--
Confidence            99899999999999999999775 99999988877777776655322 11   2234448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +++|++
T Consensus       255 --~~~i~~  260 (266)
T cd05064         255 --FSQIHS  260 (266)
T ss_pred             --HHHHHH
Confidence              888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-44  Score=347.01  Aligned_cols=253  Identities=31%  Similarity=0.473  Sum_probs=224.3

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeE
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      .+.||+|.||+||-|.++.+++.         ||||+|.+.++...+ ...+..|++||+.++||.||.+-..|+..+..
T Consensus       569 devLGSGQFG~VYgg~hRktGrd---------VAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRD---------VAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             HhhccCCcceeeecceecccCce---------eeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            56899999999999999888775         999999988776544 36777899999999999999999999999999


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEEeccCccccc
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSLCS  241 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~  241 (451)
                      |+|||.+ +|++.+++-....+++++...+.++.||+.||.|||.+||+|+||||+|||+.+.   -++||||||+|+..
T Consensus       639 FVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  639 FVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             EEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            9999999 6777777766667889999999999999999999999999999999999999854   37999999998543


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      .+.                                                        +-..+++||+.|.|||+++.+
T Consensus       718 gEk--------------------------------------------------------sFRrsVVGTPAYLaPEVLrnk  741 (888)
T KOG4236|consen  718 GEK--------------------------------------------------------SFRRSVVGTPAYLAPEVLRNK  741 (888)
T ss_pred             chh--------------------------------------------------------hhhhhhcCCccccCHHHHhhc
Confidence            211                                                        112256999999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChH
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA  401 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~  401 (451)
                      .|+...|+||+|+|+|--|.|..||..  ++++-.+|.+..+-+|...|..+.+ ++.+||+.+|++.-.+|.+    ++
T Consensus       742 GyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~-~AidlIn~LLqVkm~kRys----vd  814 (888)
T KOG4236|consen  742 GYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISP-EAIDLINNLLQVKMRKRYS----VD  814 (888)
T ss_pred             cccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCH-HHHHHHHHHHHHHHHHhcc----hH
Confidence            999999999999999999999999985  4566778888888889888888877 8999999999999999999    99


Q ss_pred             HHHcCCCcCC
Q 013016          402 DVKTHPFFKG  411 (451)
Q Consensus       402 ell~hp~~~~  411 (451)
                      ..|.|||+|+
T Consensus       815 k~lsh~Wlq~  824 (888)
T KOG4236|consen  815 KSLSHPWLQD  824 (888)
T ss_pred             hhccchhhhc
Confidence            9999999998

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6.3e-43  Score=335.44  Aligned_cols=258  Identities=24%  Similarity=0.386  Sum_probs=200.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||.|+||.||+|.++.+++         .||+|++..... .......+..|+.++++++|+||+++++++.+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~---------~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~   70 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHE---------IVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHS   70 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCc---------EEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhcc
Confidence            48899999999999999999887665         499999875421 12223456679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..|+|+||+. ++|.+++... .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus        71 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  148 (284)
T cd07839          71 DKKLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARA  148 (284)
T ss_pred             CCceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhc
Confidence            999999999995 6888777654 24599999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                       .......++..|+|||++.+
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         149 FGIPV-------------------------------------------------------RCYSAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             cCCCC-------------------------------------------------------CCcCCCccccCCcChHHHhC
Confidence            21100                                                       00011256788999999877


Q ss_pred             CC-CCcchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHhcCCC-----------------CCCCCC-------CCCcC
Q 013016          321 GS-HGNAVDWWAFGIFIYEMIYGRTPFA-APSNETTLRNIVKKPL-----------------TFPTQS-------PSSMS  374 (451)
Q Consensus       321 ~~-~~~~~DIwSlG~il~elltg~~pf~-~~~~~~~~~~i~~~~~-----------------~~~~~~-------~~~~~  374 (451)
                      .. ++.++|||||||++|+|++|..|+. ..+..+.+..+.....                 .++...       .....
T Consensus       174 ~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
T cd07839         174 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKL  253 (284)
T ss_pred             CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccC
Confidence            54 6899999999999999999988854 3443444333322110                 000000       00112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      +.++.+||.+||+.||.+|||    ++++++||||
T Consensus       254 ~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f  284 (284)
T cd07839         254 NSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF  284 (284)
T ss_pred             CHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence            348899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4e-42  Score=324.37  Aligned_cols=255  Identities=27%  Similarity=0.440  Sum_probs=212.9

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|+||.||+|.+..+.+         .+|+|.+...... ......+..|+.+++.++|+||+++++.+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   70 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQK---------LVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLE   70 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCc---------EEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEec
Confidence            58999999999999999999876655         4999998754322 2345667789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg~a~  239 (451)
                      .+..++||||++|++|.+++.......+++..++.++.|++.||+|||++|++|+||+|+||+++.++ .++|+|||++.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~  150 (256)
T cd08220          71 DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISK  150 (256)
T ss_pred             CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence            99999999999999999999876556689999999999999999999999999999999999998654 68999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                        .......|+..|+|||.+.
T Consensus       151 ~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08220         151 ILSSK--------------------------------------------------------SKAYTVVGTPCYISPELCE  174 (256)
T ss_pred             ecCCC--------------------------------------------------------ccccccccCCcccCchhcc
Confidence            32110                                                        0011236788999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|+|++|+.||...........+.........    ...+.++.+++.+||..||.+|||    
T Consensus       175 ~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt----  246 (256)
T cd08220         175 GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS----DRYSPDLRQLILSMLNLDPSKRPQ----  246 (256)
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC----CCcCHHHHHHHHHHccCChhhCCC----
Confidence            888899999999999999999999999887777666666654332111    113338999999999999999999    


Q ss_pred             hHHHHcCCCc
Q 013016          400 AADVKTHPFF  409 (451)
Q Consensus       400 ~~ell~hp~~  409 (451)
                      +.|++.||||
T Consensus       247 ~~~ll~~p~~  256 (256)
T cd08220         247 LSQIMAQPIC  256 (256)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.9e-42  Score=325.31  Aligned_cols=254  Identities=29%  Similarity=0.421  Sum_probs=210.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||.|+||.||+|.++.+.+         .||+|.+.....     ...+..|+.++++++|+||+++++.+.
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~   68 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQ---------VVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYF   68 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCc---------EEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeee
Confidence            679999999999999999999887544         499999975422     467778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ...+.|+++||+.+++|.+++.... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        69 ~~~~~~l~~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~  147 (256)
T cd06612          69 KNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSG  147 (256)
T ss_pred             cCCcEEEEEecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccch
Confidence            9999999999999999999986543 458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|+..|+|||++.
T Consensus       148 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~~~  172 (256)
T cd06612         148 QLTDTM-------------------------------------------------------AKRNTVIGTPFWMAPEVIQ  172 (256)
T ss_pred             hcccCc-------------------------------------------------------cccccccCCccccCHHHHh
Confidence            321100                                                       0011235788899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|+|++|+.||...........+......  ....+...+.++.+++.+||+.||.+||+    
T Consensus       173 ~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----  246 (256)
T cd06612         173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP--TLSDPEKWSPEFNDFVKKCLVKDPEERPS----  246 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC--CCCchhhcCHHHHHHHHHHHhcChhhCcC----
Confidence            888999999999999999999999999876655544443332211  11112223448999999999999999999    


Q ss_pred             hHHHHcCCCc
Q 013016          400 AADVKTHPFF  409 (451)
Q Consensus       400 ~~ell~hp~~  409 (451)
                      +.|+|.||||
T Consensus       247 ~~~il~~~~~  256 (256)
T cd06612         247 AIQLLQHPFI  256 (256)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.8e-42  Score=337.77  Aligned_cols=256  Identities=23%  Similarity=0.338  Sum_probs=188.6

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe--CC
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA--SN  162 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~--~~  162 (451)
                      ..+||+|+||+||+|.++....       +..||+|.+....     ....+.+|+.+++.++||||+++++++..  +.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~-------~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   73 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKD-------EKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDR   73 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCc-------cceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCC
Confidence            3579999999999999765321       1249999986432     12345679999999999999999998853  56


Q ss_pred             eEEEEEeeccCCchhhhhhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE----ccCCCEE
Q 013016          163 FSCIVMEFCSGGDLHSLRHKQ-------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV----RSDGHIM  231 (451)
Q Consensus       163 ~~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll----~~~~~~k  231 (451)
                      .+|+||||+ +++|.+++...       ....+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+|
T Consensus        74 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~k  152 (317)
T cd07867          74 KVWLLFDYA-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  152 (317)
T ss_pred             eEEEEEeee-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEE
Confidence            889999999 56787776432       12358899999999999999999999999999999999999    4567999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                    .........||+.
T Consensus       153 l~DfG~a~~~~~~~~----------------------------------------------------~~~~~~~~~~t~~  180 (317)
T cd07867         153 IADMGFARLFNSPLK----------------------------------------------------PLADLDPVVVTFW  180 (317)
T ss_pred             EeeccceeccCCCcc----------------------------------------------------cccccCcceeccc
Confidence            999999853321100                                                    0001113478999


Q ss_pred             ccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHhcCCCC--------------CCC
Q 013016          312 YVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---------TTLRNIVKKPLT--------------FPT  367 (451)
Q Consensus       312 y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~---------~~~~~i~~~~~~--------------~~~  367 (451)
                      |+|||++.+. .++.++|||||||++|||+||+.||.....+         ..+..+......              ++.
T Consensus       181 y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (317)
T cd07867         181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPT  260 (317)
T ss_pred             ccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchh
Confidence            9999999774 4799999999999999999999999753321         111111110000              000


Q ss_pred             -------------------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          368 -------------------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       368 -------------------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                                         .......+..+.+||.+||+.||.+|||    +.|+|+||||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t----~~e~l~hp~f  317 (317)
T cd07867         261 LQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRIT----SEQALQDPYF  317 (317)
T ss_pred             hhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccC----HHHHhcCCCC
Confidence                               0000112236889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-43  Score=347.25  Aligned_cols=260  Identities=26%  Similarity=0.430  Sum_probs=231.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ...|.+.+.||+|.|++|.+|++..++.+         ||||++.+...... ....+.+|+++|+.++|||||+++.+.
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~---------VaiK~idkt~ln~~-~~~k~~rev~imk~l~HPnIvkl~~v~  124 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTE---------VAIKIIDKTQLNPS-KRQKLGREVDIMKSLNHPNIVKLFSVI  124 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCce---------EEEEEehhcccChH-HHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            37799999999999999999999988775         99999988765433 334478899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +....+|+||||+.+|.+++++...  +.+.+..+..++.|++.|++|||+++|||||||++|||++.+.++||+|||++
T Consensus       125 ~t~~~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS  202 (596)
T KOG0586|consen  125 ETEATLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFS  202 (596)
T ss_pred             eecceeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccc
Confidence            9999999999999999999999886  56788999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ..+..                                                        ...-.++||++.|.|||+.
T Consensus       203 ~~~~~--------------------------------------------------------~~~lqt~cgsppyAaPEl~  226 (596)
T KOG0586|consen  203 TFFDY--------------------------------------------------------GLMLQTFCGSPPYAAPELF  226 (596)
T ss_pred             eeecc--------------------------------------------------------cccccccCCCCCccChHhh
Confidence            53321                                                        1122357999999999999


Q ss_pred             cCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .|..| +..+|+||+|++||.|+.|..||.+.+-.+.-.+.+.+...++..+..     ++.++|+++|.++|.+|++  
T Consensus       227 ~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~-----dce~lLrk~lvl~Pskr~~--  299 (596)
T KOG0586|consen  227 NGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSC-----DCEDLLRKFLVLNPSKRGP--  299 (596)
T ss_pred             cCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeec-----hhHHHHHHhhccCccccCC--
Confidence            99887 789999999999999999999999998888888888888888776655     8999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCCcc
Q 013016          398 RGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~  415 (451)
                        ++++.+|.|.......
T Consensus       300 --~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  300 --CDQIMKDRWRNDLLEA  315 (596)
T ss_pred             --HHHhhhhcccchhhhh
Confidence              9999999999874443

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.3e-42  Score=346.79  Aligned_cols=261  Identities=16%  Similarity=0.283  Sum_probs=203.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|++.+.||+|+||+||+|.+....+    .+.+..||||++.....  ......+.+|+.+++.+ +||||++++++
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~----~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~  107 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFK----SDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGA  107 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEecccc----CccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            3679999999999999999998643221    12233599999974422  22335677799999999 89999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC-----------------------------------------------------
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP-----------------------------------------------------  184 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------------------------------------------  184 (451)
                      +...+..++|||||+||+|.+++....                                                     
T Consensus       108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  187 (375)
T cd05104         108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR  187 (375)
T ss_pred             eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence            999999999999999999999886432                                                     


Q ss_pred             --------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          185 --------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       185 --------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                                          ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~  267 (375)
T cd05104         188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND  267 (375)
T ss_pred             ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence                                124788899999999999999999999999999999999999999999999998432110


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                      ..                                                     ........++..|+|||++.+..++
T Consensus       268 ~~-----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~  294 (375)
T cd05104         268 SN-----------------------------------------------------YVVKGNARLPVKWMAPESIFNCVYT  294 (375)
T ss_pred             cc-----------------------------------------------------ccccCCCCCCcceeChhHhcCCCCC
Confidence            00                                                     0000112456679999999999999


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHH
Q 013016          325 NAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~el  403 (451)
                      .++|||||||++|+|++ |..||........+..++........   +...+.++.+|+.+||+.||++||+    +.||
T Consensus       295 ~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs----~~ei  367 (375)
T cd05104         295 FESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS---PECAPSEMYDIMKSCWDADPLKRPT----FKQI  367 (375)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC---CCCCCHHHHHHHHHHccCChhHCcC----HHHH
Confidence            99999999999999998 99999876555444444443221111   1223448999999999999999999    9998


Q ss_pred             Hc
Q 013016          404 KT  405 (451)
Q Consensus       404 l~  405 (451)
                      ++
T Consensus       368 l~  369 (375)
T cd05104         368 VQ  369 (375)
T ss_pred             HH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-42  Score=328.97  Aligned_cols=146  Identities=31%  Similarity=0.469  Sum_probs=123.3

Q ss_pred             hhhccCCCCCcccC--CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHH
Q 013016           67 RSATFGRKTGLTFR--DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK  144 (451)
Q Consensus        67 ~~~~~~~~~~~~~~--~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~  144 (451)
                      +.+......|..|+  +|.+.++||||.|++||+|.+....+         .||+||.+..    ....+....||.+|+
T Consensus        63 kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r---------~VAlKVvKSA----qhYtEaAlDEIklL~  129 (590)
T KOG1290|consen   63 KGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKR---------YVALKVVKSA----QHYTEAALDEIKLLQ  129 (590)
T ss_pred             cCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCe---------EEEEEEEehh----hHHHHHHHHHHHHHH
Confidence            34444555666555  69999999999999999999988776         5999999854    334455666999999


Q ss_pred             HCC-----C---CCccceeEEEEeC----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCC
Q 013016          145 MLD-----H---PFLPTLYAEFEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLG  211 (451)
Q Consensus       145 ~l~-----h---~nIv~l~~~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~g  211 (451)
                      ++.     |   .+||+|++.|...    .|+|||+|++ |.+|..+|.....+.++...+++|++|||.||.||| ++|
T Consensus       130 ~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg  208 (590)
T KOG1290|consen  130 QVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG  208 (590)
T ss_pred             HHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence            872     3   4699999999754    4999999999 999999999888888999999999999999999999 579


Q ss_pred             CeeccCCCCcEEEcc
Q 013016          212 IIYRDLKPENVLVRS  226 (451)
Q Consensus       212 ivH~Dlkp~NIll~~  226 (451)
                      |||.||||+|||+..
T Consensus       209 IIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  209 IIHTDLKPENVLLCS  223 (590)
T ss_pred             ccccCCCcceeeeec
Confidence            999999999999953

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.2e-42  Score=330.41  Aligned_cols=275  Identities=39%  Similarity=0.625  Sum_probs=221.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ++|.+.+.||.|+||.||+|.+..++.         .||+|++.+...........+..|+.+++++. |+||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~   71 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNK---------EYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF   71 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCC---------EEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh
Confidence            479999999999999999999876655         49999998765544455567778999999998 99999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..++|||++++++|.+++...  ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~  149 (280)
T cd05581          72 QDEENLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTA  149 (280)
T ss_pred             cCCceEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccc
Confidence            9999999999999999999998875  36999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ................          .                      .   .-............+.|+..|+|||.+
T Consensus       150 ~~~~~~~~~~~~~~~~----------~----------------------~---~~~~~~~~~~~~~~~~~~~~~~~Pe~~  194 (280)
T cd05581         150 KVLDPNSSPESNKGDA----------T----------------------N---IDSQIEKNRRRFASFVGTAEYVSPELL  194 (280)
T ss_pred             cccCCccccccCCCCC----------c----------------------c---ccccccccccccccccCCccccCHHHh
Confidence            5433211100000000          0                      0   000000011222345788999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++||||||+++++|++|+.||........+..+......++...     +..+.+||.+||+.||.+||+   
T Consensus       195 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~~l~~~p~~R~~---  266 (280)
T cd05581         195 NEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNF-----PPDAKDLIEKLLVLDPQDRLG---  266 (280)
T ss_pred             CCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCcc-----CHHHHHHHHHHhcCCHhhCCC---
Confidence            888889999999999999999999999998887777777765554444333     338999999999999999999   


Q ss_pred             Ch----HHHHcCCCc
Q 013016          399 GA----ADVKTHPFF  409 (451)
Q Consensus       399 ~~----~ell~hp~~  409 (451)
                       +    +++++||||
T Consensus       267 -~~~~~~~ll~~~~~  280 (280)
T cd05581         267 -VNEGYDELKAHPFF  280 (280)
T ss_pred             -cccCHHHHhcCCCC
Confidence             8    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=4.3e-42  Score=324.43  Aligned_cols=252  Identities=26%  Similarity=0.454  Sum_probs=210.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||.|+||.||+|.++.+.+         .||+|.++....  ....+.+..|+.+++.++|+||+++++.+..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~---------~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   69 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQ---------KYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA   69 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCc---------eEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE
Confidence            58999999999999999999887665         399999864422  2344566779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+++|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+..
T Consensus        70 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~  149 (255)
T cd08219          70 DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARL  149 (255)
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCccee
Confidence            99999999999999999988776666789999999999999999999999999999999999999999999999998742


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                       ........|+..|+|||++.+
T Consensus       150 ~~~~-------------------------------------------------------~~~~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219         150 LTSP-------------------------------------------------------GAYACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             eccc-------------------------------------------------------ccccccccCCccccCHHHHcc
Confidence            2100                                                       000112468889999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++||||||+++|+|++|..||...+.......+..+......    ...+..+.+||.+||+.||++||+    +
T Consensus       175 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rp~----~  246 (255)
T cd08219         175 MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP----SHYSYELRSLIKQMFKRNPRSRPS----A  246 (255)
T ss_pred             CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC----cccCHHHHHHHHHHHhCCcccCCC----H
Confidence            88999999999999999999999999987766666666555432211    123348999999999999999999    9


Q ss_pred             HHHHcC
Q 013016          401 ADVKTH  406 (451)
Q Consensus       401 ~ell~h  406 (451)
                      .+|+.-
T Consensus       247 ~~il~~  252 (255)
T cd08219         247 TTILSR  252 (255)
T ss_pred             HHHhhc
Confidence            999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-42  Score=327.75  Aligned_cols=256  Identities=28%  Similarity=0.416  Sum_probs=207.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||.|++|.||+|.++...+         .+++|++.....    ....+..|+.+++++ .|+||+++++++
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~   72 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQ---------LVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAF   72 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCc---------EEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEE
Confidence            789999999999999999999876654         499999875432    235567799999998 699999999999


Q ss_pred             EeCC------eEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EASN------FSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~~------~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ....      .+|+||||+++++|.+++....  ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+
T Consensus        73 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~  152 (275)
T cd06608          73 IKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEV  152 (275)
T ss_pred             EecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeE
Confidence            7644      5899999999999999887643  4679999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +|+|||++......                                                       ........|+.
T Consensus       153 ~l~d~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  177 (275)
T cd06608         153 KLVDFGVSAQLDST-------------------------------------------------------LGRRNTFIGTP  177 (275)
T ss_pred             EECCCccceecccc-------------------------------------------------------hhhhcCccccc
Confidence            99999987422100                                                       00011236888


Q ss_pred             CccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          311 EYVSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       311 ~y~aPE~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      .|+|||++.+     ..++.++|||||||+||+|++|+.||...........+.......  .......+..+.+||.+|
T Consensus       178 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~  255 (275)
T cd06608         178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPT--LKSPENWSKKFNDFISEC  255 (275)
T ss_pred             cccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCC--CCchhhcCHHHHHHHHHH
Confidence            9999998754     236789999999999999999999998766666666655543211  111122344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCc
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      |..||++|||    +.+|++|||+
T Consensus       256 l~~dp~~Rpt----~~~ll~~~~~  275 (275)
T cd06608         256 LIKNYEQRPF----MEELLEHPFI  275 (275)
T ss_pred             hhcChhhCcC----HHHHhcCCCC
Confidence            9999999999    9999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=4.4e-42  Score=329.61  Aligned_cols=259  Identities=26%  Similarity=0.404  Sum_probs=204.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|++|.||+|.++.+++         .||+|++..... .......+..|+.++++++|+||+++++++.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   70 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQ---------IVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFR   70 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCc---------EEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEe
Confidence            469999999999999999999886655         499999864321 1122344567999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .....++||||++++.|..++...  ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  148 (286)
T cd07847          71 RKRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFAR  148 (286)
T ss_pred             eCCEEEEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccce
Confidence            999999999999998888776543  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                       ......++..|+|||.+.
T Consensus       149 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~aPE~~~  173 (286)
T cd07847         149 ILTGPGD-------------------------------------------------------DYTDYVATRWYRAPELLV  173 (286)
T ss_pred             ecCCCcc-------------------------------------------------------cccCcccccccCCHHHHh
Confidence            3211000                                                       001235778899999987


Q ss_pred             C-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-------------------CCCCCC--C-----CC
Q 013016          320 G-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-------------------TFPTQS--P-----SS  372 (451)
Q Consensus       320 ~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-------------------~~~~~~--~-----~~  372 (451)
                      + ..++.++|||||||++|+|++|+.||.+....+....+.....                   ..+...  .     ..
T Consensus       174 ~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd07847         174 GDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFP  253 (286)
T ss_pred             CCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhc
Confidence            6 4578999999999999999999999988766554443322100                   000000  0     01


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+..+.+|+.+||+.||++||+    +.|++.||||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f  286 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLS----CEELLEHPYF  286 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence            12347899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=5.3e-42  Score=330.87  Aligned_cols=265  Identities=25%  Similarity=0.308  Sum_probs=208.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||.|++|.||+|.++.+++         .||+|.+..... .......+..|++++++++|+||+++++++.
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNE---------TIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVH   71 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCc---------EEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEe
Confidence            689999999999999999999876655         399999865422 1223345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg~a  238 (451)
                      ..++.|+||||+ +++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++
T Consensus        72 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~  150 (294)
T PLN00009         72 SEKRLYLVFEYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA  150 (294)
T ss_pred             cCCeEEEEEecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccc
Confidence            999999999999 568888776655555789999999999999999999999999999999999985 457999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......|++.|+|||++
T Consensus       151 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~~  175 (294)
T PLN00009        151 RAFGIPV-------------------------------------------------------RTFTHEVVTLWYRAPEIL  175 (294)
T ss_pred             cccCCCc-------------------------------------------------------cccccCceeecccCHHHH
Confidence            4321100                                                       000112567889999998


Q ss_pred             cCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC------------------------CCCc
Q 013016          319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS------------------------PSSM  373 (451)
Q Consensus       319 ~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~  373 (451)
                      .+. .++.++|||||||++|+|+||+.||......+.+.++...........                        ....
T Consensus       176 ~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (294)
T PLN00009        176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPT  255 (294)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcC
Confidence            764 578999999999999999999999988766655555432111100000                        0011


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .+..+.++|.+||+.||++||+    +.+++.||||.+++.
T Consensus       256 ~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~~~~~  292 (294)
T PLN00009        256 LEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFKDLGD  292 (294)
T ss_pred             CChHHHHHHHHHccCChhhCcC----HHHHhcCchHhHHhc
Confidence            2347899999999999999999    999999999998664

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=3.5e-42  Score=329.46  Aligned_cols=259  Identities=21%  Similarity=0.322  Sum_probs=210.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+......    ..+..||+|++.....  ......+.+|+++++.+.|+||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   78 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPE----NDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCT   78 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCc----CCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEe
Confidence            6799999999999999999987654211    1123599999875422  223467778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      ..+..++||||++|++|.+++....            ...+++..+..++.||+.||.|||++|++||||||+||+++.+
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~  158 (280)
T cd05049          79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD  158 (280)
T ss_pred             cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC
Confidence            9999999999999999999987542            2447899999999999999999999999999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +.++|+|||++........                                                     ........
T Consensus       159 ~~~kl~d~g~~~~~~~~~~-----------------------------------------------------~~~~~~~~  185 (280)
T cd05049         159 LVVKIGDFGMSRDVYTTDY-----------------------------------------------------YRVGGHTM  185 (280)
T ss_pred             CeEEECCcccceecccCcc-----------------------------------------------------eecCCCCc
Confidence            9999999999742110000                                                     00001124


Q ss_pred             cCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       308 gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      ++..|+|||++.+..++.++|||||||++|+|++ |+.||......+....+..+....+..    ..+..+.+++.+||
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l  261 (280)
T cd05049         186 LPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPR----TCPSEVYDIMLGCW  261 (280)
T ss_pred             ccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCC----CCCHHHHHHHHHHc
Confidence            5678999999999899999999999999999998 999998888887777777655433321    23448999999999


Q ss_pred             ccCcCCcCCCCCChHHHHc
Q 013016          387 NKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.||++||+    +.|+++
T Consensus       262 ~~~p~~Rp~----~~eil~  276 (280)
T cd05049         262 KRDPQQRIN----IKDIHE  276 (280)
T ss_pred             CCCcccCCC----HHHHHH
Confidence            999999999    999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.9e-42  Score=329.32  Aligned_cols=260  Identities=29%  Similarity=0.449  Sum_probs=208.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.+..+++         .||+|++...... ......+..|+.++++++|+||+++++++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   70 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGE---------TVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPH   70 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCc---------eEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence            58999999999999999999877655         3999999765321 2334567789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        71 ~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~  148 (286)
T cd07832          71 GSGFVLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARL  148 (286)
T ss_pred             CCeeEEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeeccc
Confidence            99999999999 999999887653 5699999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ......                                                      .......|+..|+|||.+.+
T Consensus       149 ~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~~~~  174 (286)
T cd07832         149 FSEEEP------------------------------------------------------RLYSHQVATRWYRAPELLYG  174 (286)
T ss_pred             ccCCCC------------------------------------------------------CccccccCcccccCceeeec
Confidence            221000                                                      00011268889999999876


Q ss_pred             CC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCCC------CCcC
Q 013016          321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQSP------SSMS  374 (451)
Q Consensus       321 ~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~~------~~~~  374 (451)
                      .. ++.++|||||||++|+|++|.++|........+..+......                   ++....      ....
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (286)
T cd07832         175 ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDA  254 (286)
T ss_pred             cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCc
Confidence            44 689999999999999999999999877665555544432110                   000000      0112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcC
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~  410 (451)
                      +..+.+||.+||..||.+||+    +++++.||||.
T Consensus       255 ~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~  286 (286)
T cd07832         255 SPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT  286 (286)
T ss_pred             cHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence            348899999999999999999    99999999994

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=6.6e-42  Score=323.43  Aligned_cols=250  Identities=23%  Similarity=0.329  Sum_probs=205.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.++...          .+|+|.+.....    ....+..|+.++++++||||+++++++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~----------~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRAQI----------KVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVC   68 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEeccCc----------eEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEE
Confidence            367999999999999999999886543          299998864422    124566799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..|+||||++||+|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||.+
T Consensus        69 ~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~  147 (256)
T cd05114          69 TQQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMT  147 (256)
T ss_pred             ccCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCc
Confidence            99999999999999999999887543 35899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                      ........++..|+|||++
T Consensus       148 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  173 (256)
T cd05114         148 RYVLDDE------------------------------------------------------YTSSSGAKFPVKWSPPEVF  173 (256)
T ss_pred             cccCCCc------------------------------------------------------eeccCCCCCchhhCChhhc
Confidence            4221000                                                      0000112355679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++||||||+++|+|++ |+.||......+.+..+..+.....    +...+..+.+++.+||..||.+||+  
T Consensus       174 ~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~li~~c~~~~p~~Rps--  247 (256)
T cd05114         174 NFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----PKLASMTVYEVMYSCWHEKPEGRPT--  247 (256)
T ss_pred             ccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----CCCCCHHHHHHHHHHccCCcccCcC--
Confidence            98889999999999999999999 9999998888888777776543221    1223448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.++++
T Consensus       248 --~~~l~~  253 (256)
T cd05114         248 --FAELLR  253 (256)
T ss_pred             --HHHHHH
Confidence              999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=7.3e-42  Score=325.11  Aligned_cols=260  Identities=30%  Similarity=0.440  Sum_probs=206.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH--HHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+|.+.+.||+|+||.||+|.+..+++         .||+|++.....  ........+..|+.++++++|+||++++++
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~---------~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   72 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGR---------ELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGC   72 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCc---------EEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEE
Confidence            479999999999999999999877655         499998864321  122345667789999999999999999998


Q ss_pred             EEe--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEA--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +..  .+.++++|||+++++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+||
T Consensus        73 ~~~~~~~~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~df  150 (266)
T cd06651          73 LRDRAEKTLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDF  150 (266)
T ss_pred             EEcCCCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccC
Confidence            875  36889999999999999988764  45899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                    ........|+..|+||
T Consensus       151 g~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~aP  178 (266)
T cd06651         151 GASKRLQTICMS----------------------------------------------------GTGIRSVTGTPYWMSP  178 (266)
T ss_pred             CCcccccccccc----------------------------------------------------CCccccCCccccccCH
Confidence            997432110000                                                    0000123578889999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||...........+...... + .. +...+..+.+++ +||..+|++||+
T Consensus       179 E~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~li-~~~~~~p~~Rp~  254 (266)
T cd06651         179 EVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN-P-QL-PSHISEHARDFL-GCIFVEARHRPS  254 (266)
T ss_pred             HHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC-C-CC-chhcCHHHHHHH-HHhcCChhhCcC
Confidence            9999888999999999999999999999999876655555444332211 1 11 122333788888 677789999999


Q ss_pred             CCCChHHHHcCCCcC
Q 013016          396 SKRGAADVKTHPFFK  410 (451)
Q Consensus       396 ~~~~~~ell~hp~~~  410 (451)
                          ++||++||||+
T Consensus       255 ----~~eil~hp~~~  265 (266)
T cd06651         255 ----AEELLRHPFAQ  265 (266)
T ss_pred             ----HHHHhcCcccc
Confidence                99999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.2e-42  Score=341.41  Aligned_cols=257  Identities=26%  Similarity=0.401  Sum_probs=203.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++.         ||||++.+... .......+.+|+.++++++|+||++++++|.
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~---------vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   85 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQN---------VAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFT   85 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCE---------EEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeec
Confidence            7899999999999999999998876653         99999864321 2233345667999999999999999999886


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..      .+.|+||||+ .++|.+.+...    +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus        86 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~  160 (353)
T cd07850          86 PQKSLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL  160 (353)
T ss_pred             cCCCccccCcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEc
Confidence            44      3679999999 56888877543    8999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        .......|+..|+
T Consensus       161 Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~  184 (353)
T cd07850         161 DFGLARTAGTS--------------------------------------------------------FMMTPYVVTRYYR  184 (353)
T ss_pred             cCccceeCCCC--------------------------------------------------------CCCCCCccccccc
Confidence            99997432110                                                        0011235788899


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC----------------------------
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF----------------------------  365 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~----------------------------  365 (451)
                      |||++.+..++.++|||||||++|+|++|+.||...+....+..+.......                            
T Consensus       185 aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
T cd07850         185 APEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFE  264 (353)
T ss_pred             CHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchh
Confidence            9999999999999999999999999999999998766544443332211000                            


Q ss_pred             --------CC--CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          366 --------PT--QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       366 --------~~--~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                              +.  .......+..+++||.+||+.||++|||    +.|+|.||||+.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~eiL~~~~~~~  316 (353)
T cd07850         265 ELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRIS----VDDALQHPYINV  316 (353)
T ss_pred             hhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcC----HHHHhcChhHhh
Confidence                    00  0001123446899999999999999999    999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=7.8e-42  Score=322.60  Aligned_cols=256  Identities=25%  Similarity=0.440  Sum_probs=212.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|+||.||+|.++..+..         +|+|.+...... ......+..|+.+++.++|+||+++++.+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~---------~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~   70 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEH---------CVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQE   70 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCce---------EEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheecc
Confidence            588999999999999999999876653         999999765322 2234556779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg~a~  239 (451)
                      .+..|+|+||+++++|.+++.......+++..++.++.||+.||.|||+++++|+||||+||+++.++ .++|+|||.+.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~  150 (257)
T cd08225          71 NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIAR  150 (257)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccch
Confidence            99999999999999999998876555689999999999999999999999999999999999999886 46999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|++.|+|||++.
T Consensus       151 ~~~~~~-------------------------------------------------------~~~~~~~~~~~~~ape~~~  175 (257)
T cd08225         151 QLNDSM-------------------------------------------------------ELAYTCVGTPYYLSPEICQ  175 (257)
T ss_pred             hccCCc-------------------------------------------------------ccccccCCCccccCHHHHc
Confidence            321100                                                       0001135788899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|+|++|..||......+....+........   . ...+.++.++|.+||..+|++|||    
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~i~~~l~~~p~~Rpt----  247 (257)
T cd08225         176 NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPI---S-PNFSRDLRSLISQLFKVSPRDRPS----  247 (257)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCC---C-CCCCHHHHHHHHHHhccChhhCcC----
Confidence            88899999999999999999999999988776666666655433211   1 123348999999999999999999    


Q ss_pred             hHHHHcCCCc
Q 013016          400 AADVKTHPFF  409 (451)
Q Consensus       400 ~~ell~hp~~  409 (451)
                      +.|+++||||
T Consensus       248 ~~~ll~~~~~  257 (257)
T cd08225         248 ITSILKRPFL  257 (257)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=4.4e-42  Score=344.61  Aligned_cols=263  Identities=21%  Similarity=0.293  Sum_probs=204.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~  155 (451)
                      ...++|.+.++||.|+||.||+|.+....+.    .++..||||++....  .....+.+.+|+.+++++. ||||++++
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~----~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~  107 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRS----QPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLL  107 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCC----CCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence            3347899999999999999999987544321    223359999997542  2233456788999999996 99999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCC---------------------------------------------------
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQP---------------------------------------------------  184 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------  184 (451)
                      +++.+.+..|||||||++|+|.+++....                                                   
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (400)
T cd05105         108 GACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ  187 (400)
T ss_pred             EEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence            99999999999999999999998876431                                                   


Q ss_pred             -------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          185 -------------------------------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       185 -------------------------------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                                                                 ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~N  267 (400)
T cd05105         188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARN  267 (400)
T ss_pred             cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHh
Confidence                                                       1247888899999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++.......                                                     ...
T Consensus       268 ill~~~~~~kL~DfGla~~~~~~~-----------------------------------------------------~~~  294 (400)
T cd05105         268 VLLAQGKIVKICDFGLARDIMHDS-----------------------------------------------------NYV  294 (400)
T ss_pred             EEEeCCCEEEEEeCCcceeccccc-----------------------------------------------------ccc
Confidence            999999999999999974321100                                                     000


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......++..|+|||.+.+..++.++|||||||++|+|++ |..||........+...+......+.   +...+.++.+
T Consensus       295 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~  371 (400)
T cd05105         295 SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAK---PDHATQEVYD  371 (400)
T ss_pred             ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCC---CccCCHHHHH
Confidence            1112356788999999999889999999999999999997 99999876554444333333222221   1223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHc
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ++.+||+.||++||+    +.+|.+
T Consensus       372 li~~cl~~dP~~RPt----~~~l~~  392 (400)
T cd05105         372 IMVKCWNSEPEKRPS----FLHLSD  392 (400)
T ss_pred             HHHHHCccCHhHCcC----HHHHHH
Confidence            999999999999999    777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.2e-42  Score=323.88  Aligned_cols=253  Identities=20%  Similarity=0.294  Sum_probs=207.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ...+|.+.++||.|+||.||+|.++...+.         ||+|++....    .....+..|+.+++.++|+||++++++
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~---------~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~   70 (263)
T cd05052           4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV   70 (263)
T ss_pred             chHHeEEeeecCCcccceEEEEEEecCCce---------EEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEE
Confidence            346799999999999999999998876553         9999987432    223456779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+.+++||||+++++|.+++.......+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~  150 (263)
T cd05052          71 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL  150 (263)
T ss_pred             EcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcc
Confidence            99999999999999999999998776556689999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                      .......++..|+|||.
T Consensus       151 ~~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~  176 (263)
T cd05052         151 SRLMTGDTY------------------------------------------------------TAHAGAKFPIKWTAPES  176 (263)
T ss_pred             cccccccee------------------------------------------------------eccCCCCCccccCCHHH
Confidence            743211000                                                      00001134567999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|+|++ |..||.+....+....+......   .. +...+.++.+++.+||+.||++||+ 
T Consensus       177 ~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~li~~cl~~~p~~Rp~-  251 (263)
T cd05052         177 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM---ER-PEGCPPKVYELMRACWQWNPSDRPS-  251 (263)
T ss_pred             hccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---CC-CCCCCHHHHHHHHHHccCCcccCCC-
Confidence            998889999999999999999998 99999887777766666554211   11 1223348999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.++++
T Consensus       252 ---~~~l~~  257 (263)
T cd05052         252 ---FAEIHQ  257 (263)
T ss_pred             ---HHHHHH
Confidence               888864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=6.3e-42  Score=327.49  Aligned_cols=260  Identities=21%  Similarity=0.278  Sum_probs=206.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.+++..+.    ..+..||+|++.....  ......+..|+.+++.++|+||+++++++.
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~----~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   79 (277)
T cd05062           6 EKITMSRELGQGSFGMVYEGIAKGVVKD----EPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             HHceeeeeeccccCCeEEEEEeccCCCC----CceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            7899999999999999999987653221    1223599999864321  123345677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPH--------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~--------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      .++..++||||+++++|.+++.....        ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~  159 (277)
T cd05062          80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  159 (277)
T ss_pred             CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence            99999999999999999999875321        2367888999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                     ........++..
T Consensus       160 l~dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  186 (277)
T cd05062         160 IGDFGMTRDIYETDY-----------------------------------------------------YRKGGKGLLPVR  186 (277)
T ss_pred             ECCCCCccccCCcce-----------------------------------------------------eecCCCCccCHh
Confidence            999999743211000                                                     000001245678


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||++.+..++.++|||||||++|||++ |..||...........+.........    ...+..+.+++.+||+.||
T Consensus       187 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p  262 (277)
T cd05062         187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNP  262 (277)
T ss_pred             hcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCh
Confidence            999999998889999999999999999999 79999887777776666554332111    1233489999999999999


Q ss_pred             CCcCCCCCChHHHHcC
Q 013016          391 CNRLGSKRGAADVKTH  406 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~h  406 (451)
                      ++||+    +.|++++
T Consensus       263 ~~Rps----~~e~l~~  274 (277)
T cd05062         263 KMRPS----FLEIISS  274 (277)
T ss_pred             hhCcC----HHHHHHH
Confidence            99999    9998864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.3e-41  Score=324.32  Aligned_cols=260  Identities=29%  Similarity=0.420  Sum_probs=207.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-------HHHHHHHHHHHHHHHHCCCCCccc
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-------KKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      +|.+.+.||.|+||.||+|.+..+++         .+|+|.+.......       ....+.+..|+.+++.++|+||++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~---------~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   72 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGE---------MMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ   72 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCc---------eeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            48889999999999999999876654         39999886432211       122345677999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +++++...+..++||||++|++|.+++...  +.+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+
T Consensus        73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~  150 (272)
T cd06629          73 YLGFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKIS  150 (272)
T ss_pred             EEEEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEe
Confidence            999999999999999999999999998775  568999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.......                                                     .........|+..|+
T Consensus       151 d~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y~  177 (272)
T cd06629         151 DFGISKKSDDIY-----------------------------------------------------DNDQNMSMQGSVFWM  177 (272)
T ss_pred             eccccccccccc-----------------------------------------------------cccccccccCCcccc
Confidence            999974221000                                                     000011236788999


Q ss_pred             CcccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          314 SPEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       314 aPE~~~~~~--~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |||.+.+..  ++.++|+||||+++|+|++|..||...........+....  ..++...... .+..+.++|.+||..|
T Consensus       178 ~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~  256 (272)
T cd06629         178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMN-LSPVALDFLNACFTIN  256 (272)
T ss_pred             CHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccccc-CCHHHHHHHHHHhcCC
Confidence            999987754  7899999999999999999999997665554444433322  2222222222 3348999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCc
Q 013016          390 PCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~  409 (451)
                      |.+||+    ++++|.||||
T Consensus       257 p~~Rps----~~~il~~~~~  272 (272)
T cd06629         257 PDNRPT----ARELLQHPFI  272 (272)
T ss_pred             hhhCCC----HHHHhhCCCC
Confidence            999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.2e-43  Score=322.41  Aligned_cols=273  Identities=25%  Similarity=0.325  Sum_probs=211.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|+++++||+|.||.||+|..+++....     ...+|||.+..+.. .........+|+.+++.++|+||+.+..+|.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr-----~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKR-----TKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFL   97 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCccc-----chhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHh
Confidence            56999999999999999999665543321     12499999875532 1223345567999999999999999999997


Q ss_pred             e-CCeEEEEEeeccCCchhhhhhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC----CCEE
Q 013016          160 A-SNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD----GHIM  231 (451)
Q Consensus       160 ~-~~~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~----~~~k  231 (451)
                      . +...+|++||.+ -+|..+++..   ....++...++.|+.||+.|+.|||++.|+||||||.||||..+    |.||
T Consensus        98 ~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK  176 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK  176 (438)
T ss_pred             ccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence            7 779999999994 5788777643   23568999999999999999999999999999999999999988    8999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||+++..+.+-..-                                                    .....++-|.+
T Consensus       177 IaDlGlaR~~~~plkpl----------------------------------------------------~s~d~VVVTiW  204 (438)
T KOG0666|consen  177 IADLGLARLFNNPLKPL----------------------------------------------------ASLDPVVVTIW  204 (438)
T ss_pred             eecccHHHHhhcccccc----------------------------------------------------ccCCceEEEEE
Confidence            99999996544221100                                                    01112477889


Q ss_pred             ccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHhcCCCCCCCCCCCCc--------
Q 013016          312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPS---------NETTLRNIVKKPLTFPTQSPSSM--------  373 (451)
Q Consensus       312 y~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~--------  373 (451)
                      |+|||+++|.. |+.++|||++|||+.||+|-++.|.+..         ..+.+.+|......+....|+.+        
T Consensus       205 YRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~  284 (438)
T KOG0666|consen  205 YRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQT  284 (438)
T ss_pred             ecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHH
Confidence            99999999965 8999999999999999999999997632         22445566554333333222211        


Q ss_pred             ------------------------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          374 ------------------------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       374 ------------------------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                                              .++...+|+.+||+.||-+|.|    ++++|+|+||.+.+.+
T Consensus       285 ~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIt----a~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  285 LLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRIT----AEQALEHPYFTEDPLP  346 (438)
T ss_pred             HHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhcc----HHHHhcccccccCCCC
Confidence                                    1224779999999999999999    9999999999997554

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=7.5e-42  Score=323.87  Aligned_cols=252  Identities=22%  Similarity=0.327  Sum_probs=207.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.++||+|++|.||+|.+....          .||+|.+.....    ..+.+..|+.++++++|+||+++++.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~----------~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~   69 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNNST----------KVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAV   69 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecCCc----------eEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            4478999999999999999999876543          299998864322    23566779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..++||||+++++|.+++.......+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||+
T Consensus        70 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~  149 (261)
T cd05072          70 VTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGL  149 (261)
T ss_pred             EcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCcc
Confidence            99999999999999999999999876667789999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                      .......++..|+|||+
T Consensus       150 ~~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~  175 (261)
T cd05072         150 ARVIEDNEY------------------------------------------------------TAREGAKFPIKWTAPEA  175 (261)
T ss_pred             ceecCCCce------------------------------------------------------eccCCCccceecCCHHH
Confidence            843211000                                                      00001245667999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|+|++ |..||...........+..... .+..   ...+.++.+++.+||+.+|++||+ 
T Consensus       176 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~li~~~l~~~p~~Rp~-  250 (261)
T cd05072         176 INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-MPRM---ENCPDELYDIMKTCWKEKAEERPT-  250 (261)
T ss_pred             hccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-CCCC---CCCCHHHHHHHHHHccCCcccCcC-
Confidence            988889999999999999999998 9999988777776666655432 2211   123448999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         ++++++
T Consensus       251 ---~~~i~~  256 (261)
T cd05072         251 ---FDYLQS  256 (261)
T ss_pred             ---HHHHHH
Confidence               888754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=5e-42  Score=328.26  Aligned_cols=259  Identities=26%  Similarity=0.377  Sum_probs=213.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|+..++||.|+||.||+|.++....         .||+|++.....  ......+..|+.+++.+.|+||+++++++.
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQ---------VVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYL   72 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCE---------EEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            458888999999999999999876654         499999875422  234567778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++..|+||||++|++|.+++..   ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~  149 (277)
T cd06640          73 KGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAG  149 (277)
T ss_pred             ECCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccce
Confidence            99999999999999999998865   358999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|+..|+|||++.
T Consensus       150 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~apE~~~  174 (277)
T cd06640         150 QLTDTQ-------------------------------------------------------IKRNTFVGTPFWMAPEVIQ  174 (277)
T ss_pred             eccCCc-------------------------------------------------------cccccccCcccccCHhHhc
Confidence            221000                                                       0011235778899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|+|||||++|+|++|+.||...........+......   . .....+..+.+|+.+||+.+|++||+    
T Consensus       175 ~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~li~~~l~~~p~~Rp~----  246 (277)
T cd06640         175 QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPP---T-LTGEFSKPFKEFIDACLNKDPSFRPT----  246 (277)
T ss_pred             cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCC---C-CchhhhHHHHHHHHHHcccCcccCcC----
Confidence            888999999999999999999999999877665554444332211   1 11123447899999999999999999    


Q ss_pred             hHHHHcCCCcCCCCcc
Q 013016          400 AADVKTHPFFKGLNFA  415 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~  415 (451)
                      +.+++.|+||......
T Consensus       247 ~~~il~~~~~~~~~~~  262 (277)
T cd06640         247 AKELLKHKFIVKNAKK  262 (277)
T ss_pred             HHHHHhChHhhhcchh
Confidence            9999999999986653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.5e-42  Score=329.71  Aligned_cols=259  Identities=28%  Similarity=0.390  Sum_probs=204.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.++.+++         .||+|++.+..... .....+..|+++++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~---------~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   70 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQ---------IVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFR   70 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCC---------EEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcc
Confidence            469999999999999999999876655         49999986543222 23345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|..+....  ..+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~  148 (286)
T cd07846          71 RKKRLYLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR  148 (286)
T ss_pred             cCCeEEEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeee
Confidence            999999999999999888776543  348999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......|+..|+|||++.
T Consensus       149 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07846         149 TLAAPG-------------------------------------------------------EVYTDYVATRWYRAPELLV  173 (286)
T ss_pred             eccCCc-------------------------------------------------------cccCcccceeeccCcHHhc
Confidence            321100                                                       0001235788899999987


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCCC-------CC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQSP-------SS  372 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~~-------~~  372 (451)
                      +. .++.++||||||+++|+|++|+.||......+....+......                   .+....       ..
T Consensus       174 ~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd07846         174 GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFP  253 (286)
T ss_pred             cccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCC
Confidence            63 4688999999999999999999999876654443333321000                   000000       01


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+..+.+|+.+||+.||++||+    +.+++.||||
T Consensus       254 ~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~  286 (286)
T cd07846         254 KLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF  286 (286)
T ss_pred             CcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence            12347899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.1e-41  Score=325.79  Aligned_cols=263  Identities=29%  Similarity=0.413  Sum_probs=208.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|...++||.|++|.||+|.++.+.+         .+|+|++.....  ......+.+|++++++++|+||+++++++.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   69 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGM---------IFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFL   69 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCe---------EEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEE
Confidence            468999999999999999999977654         499999875422  234456778999999999999999999886


Q ss_pred             eC--CeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          160 AS--NFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       160 ~~--~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ..  +.+|+||||++|++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+||
T Consensus        70 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~df  149 (287)
T cd06621          70 DESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDF  149 (287)
T ss_pred             ccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeec
Confidence            43  4789999999999999887542  2455899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                         ......++..|+||
T Consensus       150 g~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~~p  172 (287)
T cd06621         150 GVSGELVNS---------------------------------------------------------LAGTFTGTSFYMAP  172 (287)
T ss_pred             ccccccccc---------------------------------------------------------ccccccCCccccCH
Confidence            997321100                                                         00012567789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCC-CCCCCC-CCcChHHHHHHHHHhccc
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-----NETTLRNIVKKPLT-FPTQSP-SSMSEYHARDLISGLLNK  388 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~-~~~~~~-~~~~~~~~~~ll~~~L~~  388 (451)
                      |.+.+..++.++|||||||++|+|++|+.||....     ..+....+...... .+.... ....+..+.+||.+||..
T Consensus       173 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  252 (287)
T cd06621         173 ERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEK  252 (287)
T ss_pred             HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCC
Confidence            99998889999999999999999999999998652     23333333332211 111111 112344789999999999


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      ||.+|||    +.|++.||||+....
T Consensus       253 ~p~~Rpt----~~eil~~~~~~~~~~  274 (287)
T cd06621         253 DPTRRPT----PWDMLEHPWIKAQMK  274 (287)
T ss_pred             CcccCCC----HHHHHhCcccccccc
Confidence            9999999    999999999977443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.6e-41  Score=322.48  Aligned_cols=260  Identities=28%  Similarity=0.414  Sum_probs=207.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH--HHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+|.+.+.||+|+||.||+|.++.+++         .||||.+.....  ........+..|+.+++++.|+||++++++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~---------~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   72 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGR---------ELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGC   72 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCc---------EEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeE
Confidence            579999999999999999999887665         399998864321  122345677789999999999999999998


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +.+.  ..+++||||++|++|.+++...  ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+||
T Consensus        73 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Df  150 (265)
T cd06652          73 LRDPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDF  150 (265)
T ss_pred             eccCCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcC
Confidence            8763  5789999999999999988765  44889999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    .........|+..|+||
T Consensus       151 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aP  178 (265)
T cd06652         151 GASKRLQTICL----------------------------------------------------SGTGMKSVTGTPYWMSP  178 (265)
T ss_pred             ccccccccccc----------------------------------------------------cccccccCCCCccccCh
Confidence            98743211000                                                    00001123688899999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||........+.++...... +  ..+...+..+.++|.+|+. +|++||+
T Consensus       179 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~l~-~p~~Rp~  254 (265)
T cd06652         179 EVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-P--VLPPHVSDHCRDFLKRIFV-EAKLRPS  254 (265)
T ss_pred             hhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC-C--CCchhhCHHHHHHHHHHhc-ChhhCCC
Confidence            9998888999999999999999999999999876555555544433211 1  1122233478999999994 9999999


Q ss_pred             CCCChHHHHcCCCcC
Q 013016          396 SKRGAADVKTHPFFK  410 (451)
Q Consensus       396 ~~~~~~ell~hp~~~  410 (451)
                          ++||++|||+.
T Consensus       255 ----~~~il~~~~~~  265 (265)
T cd06652         255 ----ADELLRHTFVH  265 (265)
T ss_pred             ----HHHHhcCcccC
Confidence                99999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.4e-42  Score=337.40  Aligned_cols=261  Identities=18%  Similarity=0.292  Sum_probs=202.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||.|+||.||+|.+.+....    ..+..||+|++.....  ......+..|+.++.++ +|+||+++++++
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~----~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKS----ASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccc----cccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence            6899999999999999999986554321    2233599999874321  23345566799999999 799999999988


Q ss_pred             EeC-CeEEEEEeeccCCchhhhhhhCCC----------------------------------------------------
Q 013016          159 EAS-NFSCIVMEFCSGGDLHSLRHKQPH----------------------------------------------------  185 (451)
Q Consensus       159 ~~~-~~~~lV~E~~~ggsL~~~l~~~~~----------------------------------------------------  185 (451)
                      ... ..+++||||+++++|.+++.....                                                    
T Consensus        81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
T cd05054          81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE  160 (337)
T ss_pred             ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence            644 578999999999999998864321                                                    


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCC
Q 013016          186 -------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS  258 (451)
Q Consensus       186 -------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~  258 (451)
                             ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......             
T Consensus       161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~-------------  227 (337)
T cd05054         161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-------------  227 (337)
T ss_pred             hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCc-------------
Confidence                   258899999999999999999999999999999999999999999999999985321100             


Q ss_pred             CCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHH
Q 013016          259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYE  338 (451)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~e  338 (451)
                                                              .........++..|+|||++.+..++.++|||||||++|+
T Consensus       228 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~e  267 (337)
T cd05054         228 ----------------------------------------DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE  267 (337)
T ss_pred             ----------------------------------------chhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHH
Confidence                                                    0001112356678999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          339 MIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       339 llt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |++ |..||......+.+............   +.....++.+++.+||+.+|++||+    +.||++|
T Consensus       268 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~  329 (337)
T cd05054         268 IFSLGASPYPGVQIDEEFCRRLKEGTRMRA---PEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI  329 (337)
T ss_pred             HHHcCCCCCCCCCccHHHHHHHhccCCCCC---CccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            998 99999875544444444333221111   1223348999999999999999999    9999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-43  Score=343.36  Aligned_cols=243  Identities=28%  Similarity=0.459  Sum_probs=202.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      |+...-++-||.|+-|-||+|+.++..           ||||.++..          -+.+|+-|++|+|+||+.+.|+|
T Consensus       123 Fe~IsELeWlGSGaQGAVF~Grl~net-----------VAVKKV~el----------kETdIKHLRkLkH~NII~FkGVC  181 (904)
T KOG4721|consen  123 FEEISELEWLGSGAQGAVFLGRLHNET-----------VAVKKVREL----------KETDIKHLRKLKHPNIITFKGVC  181 (904)
T ss_pred             HHHhhhhhhhccCcccceeeeeccCce-----------ehhHHHhhh----------hhhhHHHHHhccCcceeeEeeee
Confidence            344444567899999999999988764           999987622          22378889999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .....+|||||||..|.|.++|+..  ..+.......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.+
T Consensus       182 tqsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS  259 (904)
T KOG4721|consen  182 TQSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTS  259 (904)
T ss_pred             cCCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccch
Confidence            9999999999999999999999875  55899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +.....                                                        ++.-+|+||..|||||+|
T Consensus       260 ~e~~~~--------------------------------------------------------STkMSFaGTVaWMAPEvI  283 (904)
T KOG4721|consen  260 KELSDK--------------------------------------------------------STKMSFAGTVAWMAPEVI  283 (904)
T ss_pred             Hhhhhh--------------------------------------------------------hhhhhhhhhHhhhCHHHh
Confidence            543211                                                        222257999999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+.+.+.|+|||||||||||||||+.||...+...++--+-...+.+|   .+...++.++-||+.||+-.|.+||+   
T Consensus       284 rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp---vPstcP~GfklL~Kqcw~sKpRNRPS---  357 (904)
T KOG4721|consen  284 RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP---VPSTCPDGFKLLLKQCWNSKPRNRPS---  357 (904)
T ss_pred             hcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc---CcccCchHHHHHHHHHHhcCCCCCcc---
Confidence            999999999999999999999999999986544333222222222222   23445558999999999999999999   


Q ss_pred             ChHHHHcCC
Q 013016          399 GAADVKTHP  407 (451)
Q Consensus       399 ~~~ell~hp  407 (451)
                       ++++|.|-
T Consensus       358 -Frqil~Hl  365 (904)
T KOG4721|consen  358 -FRQILLHL  365 (904)
T ss_pred             -HHHHHHHH
Confidence             99999984

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=7e-42  Score=336.63  Aligned_cols=261  Identities=23%  Similarity=0.354  Sum_probs=201.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.+..+++         .||||++...  ........+..|+.++++++|+||+++++++.
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~---------~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   73 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGV---------KVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIR   73 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCC---------eEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheee
Confidence            689999999999999999999887665         3999998642  12233455667999999999999999999875


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     .+.|+|+||+ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        74 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~d  149 (336)
T cd07849          74 PPSFESFNDVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICD  149 (336)
T ss_pred             cccccccceEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECc
Confidence            44     3689999999 4678777654   4599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++........                                                    .........|+..|+|
T Consensus       150 fg~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~a  177 (336)
T cd07849         150 FGLARIADPEHD----------------------------------------------------HTGFLTEYVATRWYRA  177 (336)
T ss_pred             ccceeecccccc----------------------------------------------------ccCCcCCcCcCCCccC
Confidence            999753211000                                                    0001112468899999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--------------------CCCC-----
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--------------------FPTQ-----  368 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------------------~~~~-----  368 (451)
                      ||.+.+ ..++.++|||||||++|+|++|+.||........+..+......                    .+..     
T Consensus       178 PE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
T cd07849         178 PEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPW  257 (336)
T ss_pred             hHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccH
Confidence            998765 45899999999999999999999999775544333222211000                    0000     


Q ss_pred             --CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          369 --SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       369 --~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                        ..+. .+.++.+||.+||+.||++|||    +.|+++||||+..
T Consensus       258 ~~~~~~-~~~~~~~li~~~l~~dP~~Rpt----~~e~l~hp~~~~~  298 (336)
T cd07849         258 NKLFPN-ADPKALDLLDKMLTFNPHKRIT----VEEALAHPYLEQY  298 (336)
T ss_pred             HHHhcc-cCcHHHHHHHHHcCCChhhCcC----HHHHhcCcccccc
Confidence              0011 2337899999999999999999    9999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.3e-41  Score=326.30  Aligned_cols=261  Identities=20%  Similarity=0.311  Sum_probs=206.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.++||+|+||+||+|.+.....     +.+..||+|.+....  .......+..|+.+++.++|+||++++++
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~-----~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~   75 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGM-----DHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGV   75 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCC-----CCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEE
Confidence            45789999999999999999998643221     122359999997532  23344567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP---------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV  222 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NI  222 (451)
                      +...+..|+||||+++++|.+++....               ...+++..+..++.||+.||.|||++|++||||||+||
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ni  155 (283)
T cd05090          76 VTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNI  155 (283)
T ss_pred             EecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceE
Confidence            999999999999999999999885332               12478899999999999999999999999999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      |++.++.+||+|||++.......                                                     ....
T Consensus       156 li~~~~~~kl~dfg~~~~~~~~~-----------------------------------------------------~~~~  182 (283)
T cd05090         156 LIGEQLHVKISDLGLSREIYSAD-----------------------------------------------------YYRV  182 (283)
T ss_pred             EEcCCCcEEeccccccccccCCc-----------------------------------------------------ceec
Confidence            99999999999999985321100                                                     0001


Q ss_pred             ccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.........+...... +   .+...+..+.++
T Consensus       183 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~l  258 (283)
T cd05090         183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL-P---CSEDCPPRMYSL  258 (283)
T ss_pred             ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-C---CCCCCCHHHHHH
Confidence            112345677999999988889999999999999999998 99999887666555555443321 1   112234489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHcC
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.+||+.||++||+    +.+|+++
T Consensus       259 i~~cl~~~p~~Rp~----~~~i~~~  279 (283)
T cd05090         259 MTECWQEGPSRRPR----FKDIHTR  279 (283)
T ss_pred             HHHHcccCcccCcC----HHHHHHH
Confidence            99999999999999    8888754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=3.4e-42  Score=326.75  Aligned_cols=256  Identities=30%  Similarity=0.436  Sum_probs=210.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|++|.||+|.++..++         .+|+|++.....  ......+.+|+++++.+.|+||+++++.+.
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   69 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGK---------IMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFY   69 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCc---------EEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeee
Confidence            368888999999999999999886655         499999876532  234456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+..++|+||+++++|.+++.... ..+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||.+
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~  148 (265)
T cd06605          70 NNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS  148 (265)
T ss_pred             cCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence            9999999999999999999987754 568999999999999999999999 99999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                         ......|+..|+|||.+
T Consensus       149 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~~PE~~  171 (265)
T cd06605         149 GQLVNS---------------------------------------------------------LAKTFVGTSSYMAPERI  171 (265)
T ss_pred             hhhHHH---------------------------------------------------------HhhcccCChhccCHHHH
Confidence            321100                                                         00013678889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      .+..++.++|||||||++|+|++|+.||....     ..+.+..+......  . ......+.++.++|.+||..||++|
T Consensus       172 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~li~~~l~~~p~~R  248 (265)
T cd06605         172 QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--R-LPSGKFSPDFQDFVNLCLIKDPRER  248 (265)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--C-CChhhcCHHHHHHHHHHcCCCchhC
Confidence            99889999999999999999999999997642     22334444333211  1 1111134489999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCC
Q 013016          394 LGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~  411 (451)
                      |+    +.+++.||||++
T Consensus       249 pt----~~~ll~~~~~~~  262 (265)
T cd06605         249 PS----YKELLEHPFIKK  262 (265)
T ss_pred             cC----HHHHhhCchhhc
Confidence            99    999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-41  Score=321.90  Aligned_cols=257  Identities=21%  Similarity=0.262  Sum_probs=207.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++...+      ....||+|++....  .......+..|+.++++++|+||+++++++.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~------~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGK------KEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVT   75 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCC------CcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEe
Confidence            679999999999999999999865421      11249999987543  2233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||+++++|.+++.... +.+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.
T Consensus        76 ~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~  154 (266)
T cd05033          76 KSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             cCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence            9999999999999999999987653 368999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                     ........++..|+|||.+.
T Consensus       155 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~~Pe~~~  181 (266)
T cd05033         155 RLEDSEA-----------------------------------------------------TYTTKGGKIPIRWTAPEAIA  181 (266)
T ss_pred             ccccccc-----------------------------------------------------ceeccCCCCCccccChhhhc
Confidence            4320000                                                     00000113467899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |..||......+....+.........    ...+..+.+|+.+||+.+|++||+   
T Consensus       182 ~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rp~---  254 (266)
T cd05033         182 YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP----MDCPSALYQLMLDCWQKDRNERPT---  254 (266)
T ss_pred             cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcC---
Confidence            8889999999999999999998 99999887777776666554322111    123448999999999999999999   


Q ss_pred             ChHHHHcC
Q 013016          399 GAADVKTH  406 (451)
Q Consensus       399 ~~~ell~h  406 (451)
                       +.+|+++
T Consensus       255 -~~ei~~~  261 (266)
T cd05033         255 -FSQIVST  261 (266)
T ss_pred             -HHHHHHH
Confidence             9998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.1e-41  Score=322.30  Aligned_cols=251  Identities=22%  Similarity=0.316  Sum_probs=206.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||+||+|.+.+...          +|+|.+.....    ....+..|+.++++++||||+++++++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~----------~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRGQYD----------VAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVC   68 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecCCCc----------EEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            3679999999999999999998765432          99999875422    124567799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..++||||+.+++|.+++..... .+++..++.++.||+.||+|||+.|++|+||||+||+++.++.+||+|||.+
T Consensus        69 ~~~~~~~lv~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~  147 (256)
T cd05113          69 TKQRPIYIVTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLS  147 (256)
T ss_pred             ccCCCcEEEEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccc
Confidence            999999999999999999999876533 6899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                      ........++..|+|||++
T Consensus       148 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~~pe~~  173 (256)
T cd05113         148 RYVLDDE------------------------------------------------------YTSSVGSKFPVRWSPPEVL  173 (256)
T ss_pred             eecCCCc------------------------------------------------------eeecCCCccChhhCCHHHH
Confidence            4321100                                                      0000012356679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |+.||......+....+..+......    ...+..+.+++.+||..||.+||+  
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~--  247 (256)
T cd05113         174 LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP----HLASEKVYAIMYSCWHEKAEERPT--  247 (256)
T ss_pred             hcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCCC--
Confidence            88889999999999999999998 99999887777777777665433222    223448999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.+|+.+
T Consensus       248 --~~~ll~~  254 (256)
T cd05113         248 --FQQLLSS  254 (256)
T ss_pred             --HHHHHHh
Confidence              9999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.5e-41  Score=327.61  Aligned_cols=261  Identities=25%  Similarity=0.328  Sum_probs=202.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ++|++.+.||.|+||.||+|.+..+++         .||||++..... .......+..|+.+++.+. |+||+++++++
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~   70 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGK---------LVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVE   70 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCc---------EEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeE
Confidence            469999999999999999999887665         499999865422 1223345667999999995 69999999999


Q ss_pred             EeCCe-----EEEEEeeccCCchhhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCC
Q 013016          159 EASNF-----SCIVMEFCSGGDLHSLRHKQP---HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGH  229 (451)
Q Consensus       159 ~~~~~-----~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~  229 (451)
                      ...+.     .|+||||+++ +|.+++....   ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.
T Consensus        71 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~  149 (295)
T cd07837          71 HVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGL  149 (295)
T ss_pred             eecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCe
Confidence            87665     8999999965 8888876542   346899999999999999999999999999999999999998 889


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++.......                                                       .......++
T Consensus       150 ~kl~dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~  174 (295)
T cd07837         150 LKIADLGLGRAFSIPV-------------------------------------------------------KSYTHEIVT  174 (295)
T ss_pred             EEEeecccceecCCCc-------------------------------------------------------cccCCcccc
Confidence            9999999974221000                                                       000011467


Q ss_pred             CCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC------------------
Q 013016          310 HEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP------------------  370 (451)
Q Consensus       310 ~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------  370 (451)
                      +.|+|||++.+ ..++.++||||||+++|+|++|..||...........+...........+                  
T Consensus       175 ~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T cd07837         175 LWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQ  254 (295)
T ss_pred             cCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccch
Confidence            78999998866 45789999999999999999999999887666555444332110000000                  


Q ss_pred             -----CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcC
Q 013016          371 -----SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       371 -----~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~  410 (451)
                           ....+.++.+||.+||..||.+||+    +.|++.||||+
T Consensus       255 ~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~eil~~~~~~  295 (295)
T cd07837         255 DLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKAALTHPYFD  295 (295)
T ss_pred             hHHHhccccCHHHHHHHHHHccCChhhcCC----HHHHhcCCCcC
Confidence                 0113347899999999999999999    99999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.3e-41  Score=323.20  Aligned_cols=255  Identities=25%  Similarity=0.359  Sum_probs=205.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|+++.+++         .||||.+.............+..|+.+++.++||||+++++++.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRK---------PVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI   72 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCC---------EEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE
Confidence            689999999999999999999877665         39999886543333445566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..+..++||||+++++|.+++...  ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+
T Consensus        73 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~  152 (267)
T cd08228          73 EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL  152 (267)
T ss_pred             ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECcccc
Confidence            999999999999999999988643  234589999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                       .......|+..|+|||.
T Consensus       153 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~aPE~  177 (267)
T cd08228         153 GRFFSSKT-------------------------------------------------------TAAHSLVGTPYYMSPER  177 (267)
T ss_pred             ceeccchh-------------------------------------------------------HHHhcCCCCccccChhh
Confidence            74321000                                                       00012367888999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++||||||+++|+|++|+.||.....  ......+....  .+... ....+..+.+++.+||..+|++||+
T Consensus       178 ~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~  254 (267)
T cd08228         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLP-TEHYSEKLRELVSMCIYPDPDQRPD  254 (267)
T ss_pred             hccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCC-hhhcCHHHHHHHHHHCCCCcccCcC
Confidence            9988899999999999999999999999975432  23333333322  11111 1123347999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +.++++
T Consensus       255 ----~~~vl~  260 (267)
T cd08228         255 ----IGYVHQ  260 (267)
T ss_pred             ----HHHHHH
Confidence                999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=2e-41  Score=326.41  Aligned_cols=258  Identities=27%  Similarity=0.361  Sum_probs=199.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+...++         .||+|++.....  ......+.+|+.+++.++|+||+++++++.
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~   73 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQ---------LVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIH   73 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCc---------EEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            689999999999999999999877665         399999865421  122234567999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.
T Consensus        74 ~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~  151 (291)
T cd07870          74 TKETLTFVFEYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLAR  151 (291)
T ss_pred             cCCeEEEEEecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEecccccc
Confidence            999999999999 567777665443 457889999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......++..|+|||++.
T Consensus       152 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~  176 (291)
T cd07870         152 AKSIPS-------------------------------------------------------QTYSSEVVTLWYRPPDVLL  176 (291)
T ss_pred             ccCCCC-------------------------------------------------------CCCCCccccccccCCceee
Confidence            211000                                                       0001125678899999987


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCC--------------CC---------C----CCCC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPL--------------TF---------P----TQSP  370 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~--------------~~---------~----~~~~  370 (451)
                      +. .++.++|||||||++|+|++|+.||...... +.+..+.....              .+         +    ....
T Consensus       177 ~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (291)
T cd07870         177 GATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWK  256 (291)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhcc
Confidence            64 4788999999999999999999999765432 22322221000              00         0    0000


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ....+.++.+++.+||..||.+|||    +.|++.||||
T Consensus       257 ~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h~~~  291 (291)
T cd07870         257 RLSRPPKAEDLASQMLMMFPKDRIS----AQDALLHPYF  291 (291)
T ss_pred             ccCCChHHHHHHHHHhCcCcccCcC----HHHHhcCCCC
Confidence            0112347899999999999999999    9999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=4e-41  Score=319.01  Aligned_cols=259  Identities=30%  Similarity=0.513  Sum_probs=208.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||+|+||.||+|.+..+.+         .||+|++...... ......+..|+.+++.++|+||+++++.+..
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~   70 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGE---------LMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVH   70 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCc---------EEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEec
Confidence            58899999999999999999876654         4999998765432 3456778889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..++|+||+++++|.+++...  ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~  148 (264)
T cd06626          71 REKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVK  148 (264)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccc
Confidence            99999999999999999998764  4488999999999999999999999999999999999999999999999999753


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ........                                                   ........|+..|+|||++.+
T Consensus       149 ~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~~~PE~~~~  177 (264)
T cd06626         149 LKNNTTTM---------------------------------------------------GEEVQSLAGTPAYMAPEVITG  177 (264)
T ss_pred             cCCCCCcc---------------------------------------------------cccccCCcCCcCccChhhccC
Confidence            32111000                                                   000112367889999999987


Q ss_pred             CC---CCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          321 GS---HGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       321 ~~---~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ..   ++.++||||||+++|+|++|+.||...... .....+.... ...+.   ....+..+.+||.+||+.||.+||+
T Consensus       178 ~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~  254 (264)
T cd06626         178 GKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPD---SLQLSPEGKDFLDRCLESDPKKRPT  254 (264)
T ss_pred             CCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCc---ccccCHHHHHHHHHHccCCcccCCC
Confidence            66   789999999999999999999999765333 3332332221 11221   1112448899999999999999999


Q ss_pred             CCCChHHHHcCCCc
Q 013016          396 SKRGAADVKTHPFF  409 (451)
Q Consensus       396 ~~~~~~ell~hp~~  409 (451)
                          +.+++.|||+
T Consensus       255 ----~~~i~~~~~~  264 (264)
T cd06626         255 ----ASELLQHPFV  264 (264)
T ss_pred             ----HHHHhcCCCC
Confidence                9999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.9e-41  Score=359.60  Aligned_cols=267  Identities=22%  Similarity=0.308  Sum_probs=202.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.+..+++         .||||++............++.+|+.++++++||||+++++++.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~---------~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~   72 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSR---------RVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS   72 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCc---------EEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe
Confidence            689999999999999999999887665         39999997654333444567888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP---------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      +++..|+||||++|++|.+++....         ...+++..+..++.||+.||+|||++||+||||||+|||++.+|.+
T Consensus        73 d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~v  152 (932)
T PRK13184         73 DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEV  152 (932)
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCE
Confidence            9999999999999999999886421         2335677889999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +|+|||++.............                                     ..................+||+
T Consensus       153 KLiDFGLAk~i~~~~~~~~~l-------------------------------------~~~~~~s~~s~~t~~g~~vGT~  195 (932)
T PRK13184        153 VILDWGAAIFKKLEEEDLLDI-------------------------------------DVDERNICYSSMTIPGKIVGTP  195 (932)
T ss_pred             EEEecCcceeccccccccccc-------------------------------------ccccccccccccccCCCCCCCC
Confidence            999999986442110000000                                     0000000000011122457999


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC-CCCcChHHHHHHHHHhcccC
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS-PSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~d  389 (451)
                      .|||||++.+..++.++|||||||++|||+||+.||.............   ...+... .....+..+.+++.+||+.|
T Consensus       196 ~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~---i~~P~~~~p~~~iP~~L~~LI~rcL~~D  272 (932)
T PRK13184        196 DYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDV---ILSPIEVAPYREIPPFLSQIAMKALAVD  272 (932)
T ss_pred             CCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhh---ccChhhccccccCCHHHHHHHHHHccCC
Confidence            9999999999999999999999999999999999998754433322211   1111111 11123348899999999999


Q ss_pred             cCCcCC
Q 013016          390 PCNRLG  395 (451)
Q Consensus       390 P~~Rpt  395 (451)
                      |++|++
T Consensus       273 P~kR~s  278 (932)
T PRK13184        273 PAERYS  278 (932)
T ss_pred             hhhCcC
Confidence            999988

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.3e-41  Score=325.80  Aligned_cols=270  Identities=36%  Similarity=0.708  Sum_probs=211.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +|++.+.||.|+||.||+|.+....      +.+..||+|++....... ......+..|+.+++++ +|+||+.+++++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~------~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGH------DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   74 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCC------CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe
Confidence            4889999999999999999875321      112359999997654322 22345567799999999 599999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++..|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++|++||||+|+|||++.++.+||+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  152 (290)
T cd05613          75 QTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  152 (290)
T ss_pred             ecCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence            9999999999999999999988764  45899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                      ........|+..|+|||.+
T Consensus       153 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  178 (290)
T cd05613         153 KEFHEDE------------------------------------------------------VERAYSFCGTIEYMAPDIV  178 (290)
T ss_pred             eeccccc------------------------------------------------------ccccccccCCcccCChhhc
Confidence            4321100                                                      0001124688899999998


Q ss_pred             cCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          319 SGG--SHGNAVDWWAFGIFIYEMIYGRTPFAAPSN----ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       319 ~~~--~~~~~~DIwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      .+.  .++.++||||||+++|+|++|..||.....    .+....+......++..     .+..+.+++.+||+.||++
T Consensus       179 ~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~l~~~p~~  253 (290)
T cd05613         179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE-----MSALAKDIIQRLLMKDPKK  253 (290)
T ss_pred             cCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCcc-----CCHHHHHHHHHHhcCCHHH
Confidence            763  467899999999999999999999975322    23333444433333322     3348899999999999999


Q ss_pred             cCCC-CCChHHHHcCCCcCCCCcccc
Q 013016          393 RLGS-KRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       393 Rpt~-~~~~~ell~hp~~~~~~~~~~  417 (451)
                      |++. ...+++++.||||+.++|..+
T Consensus       254 R~~~~~~~~~~l~~~~~~~~~~~~~~  279 (290)
T cd05613         254 RLGCGPSDADEIKKHPFFQKINWDDL  279 (290)
T ss_pred             hcCCCCCCHHHHHcCcccccCCHHHH
Confidence            9842 233999999999999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.5e-41  Score=320.01  Aligned_cols=256  Identities=26%  Similarity=0.391  Sum_probs=210.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||.|+||.||+|.+..+++         .||+|++..... .......+..|+.++++++|+||+++++++..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGK---------ILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIID   70 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCC---------EEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeec
Confidence            58899999999999999999877655         499999875432 23334567779999999999999999998754


Q ss_pred             --CCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeccCCCCcEEEccCCCEE
Q 013016          161 --SNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLH-----MLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       161 --~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH-----~~givH~Dlkp~NIll~~~~~~k  231 (451)
                        ....|++|||+++++|.+++...  ....+++..++.++.||+.||.|||     +.+++|+||+|+||+++.++.+|
T Consensus        71 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~k  150 (265)
T cd08217          71 RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVK  150 (265)
T ss_pred             CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEE
Confidence              45789999999999999988753  2356899999999999999999999     89999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.......                                                       .......|+..
T Consensus       151 l~d~g~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  175 (265)
T cd08217         151 LGDFGLAKILGHDS-------------------------------------------------------SFAKTYVGTPY  175 (265)
T ss_pred             EecccccccccCCc-------------------------------------------------------ccccccccCCC
Confidence            99999974321100                                                       00112367889


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |+|||.+.+..++.++||||||+++|+|++|+.||...........+..+.....    +...+..+.+++.+||+.+|.
T Consensus       176 ~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~p~  251 (265)
T cd08217         176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI----PYRYSSELNEVIKSMLNVDPD  251 (265)
T ss_pred             ccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC----ccccCHHHHHHHHHHccCCcc
Confidence            9999999988899999999999999999999999998776666666655543211    112334899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCc
Q 013016          392 NRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~  409 (451)
                      +||+    +.+|++|||+
T Consensus       252 ~Rp~----~~~il~~~~~  265 (265)
T cd08217         252 KRPS----TEELLQLPLI  265 (265)
T ss_pred             cCCC----HHHHhhCCCC
Confidence            9999    9999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.8e-42  Score=328.58  Aligned_cols=257  Identities=31%  Similarity=0.433  Sum_probs=209.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.+...++         .||+|++....  .......+..|+++++.++|+||+++++.+
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   72 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGT---------VMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAF   72 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCc---------EEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeE
Confidence            4679999999999999999999876654         49999886542  223345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ...+.+|+||||+++++|.+++...  +.+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl  150 (284)
T cd06620          73 LNENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGV  150 (284)
T ss_pred             ecCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCc
Confidence            9999999999999999999988764  458999999999999999999997 6999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.....                                                         .......|+..|+|||+
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~~~~~~~~aPE~  173 (284)
T cd06620         151 SGELIN---------------------------------------------------------SIADTFVGTSTYMSPER  173 (284)
T ss_pred             ccchhh---------------------------------------------------------hccCccccCcccCCHHH
Confidence            632100                                                         00112368899999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-----------TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +.+..++.++|||||||++|+|++|+.||......           +.+..+......   .......+.++.+|+.+||
T Consensus       174 ~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l  250 (284)
T cd06620         174 IQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP---RLPSSDFPEDLRDFVDACL  250 (284)
T ss_pred             HccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC---CCCchhcCHHHHHHHHHHh
Confidence            98888999999999999999999999999865442           223333322211   1111113348999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      ..||.+||+    +.|+++|+||.+.
T Consensus       251 ~~dp~~Rpt----~~e~~~~~~~~~~  272 (284)
T cd06620         251 LKDPTERPT----PQQLCAMPPFIQA  272 (284)
T ss_pred             cCCcccCcC----HHHHhcCcccccc
Confidence            999999999    9999999999773

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=6.7e-42  Score=330.17  Aligned_cols=259  Identities=28%  Similarity=0.416  Sum_probs=210.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.....||.|+||.||++.+..+.+         .||||.+....   ......+..|+.+++.++|+||+++++.+.
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~   89 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGK---------QVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYL   89 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCC---------EEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHhee
Confidence            446666789999999999999876654         49999986542   233455677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++.|+||||+++++|.+++..   +.+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~  166 (292)
T cd06658          90 VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA  166 (292)
T ss_pred             cCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchh
Confidence            99999999999999999998754   358999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||.+.
T Consensus       167 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  191 (292)
T cd06658         167 QVSKE-------------------------------------------------------VPKRKSLVGTPYWMAPEVIS  191 (292)
T ss_pred             hcccc-------------------------------------------------------cccCceeecCccccCHHHHc
Confidence            21100                                                       00011236888999999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|||++|+.||........+..+......... . ....+..+.+++.+||..||.+|||    
T Consensus       192 ~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~l~~~P~~Rpt----  265 (292)
T cd06658         192 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVK-D-SHKVSSVLRGFLDLMLVREPSQRAT----  265 (292)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccc-c-ccccCHHHHHHHHHHccCChhHCcC----
Confidence            888999999999999999999999999887766665555433221111 1 1123447899999999999999999    


Q ss_pred             hHHHHcCCCcCCCCc
Q 013016          400 AADVKTHPFFKGLNF  414 (451)
Q Consensus       400 ~~ell~hp~~~~~~~  414 (451)
                      ++++++||||.....
T Consensus       266 ~~~il~~~~~~~~~~  280 (292)
T cd06658         266 AQELLQHPFLKLAGP  280 (292)
T ss_pred             HHHHhhChhhhccCC
Confidence            999999999998443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.6e-41  Score=323.30  Aligned_cols=249  Identities=25%  Similarity=0.457  Sum_probs=195.9

Q ss_pred             CCceEEeee--ccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeE
Q 013016           80 RDFDLHRRI--GAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~L--G~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~  156 (451)
                      ++|.+.+.+  |.|+||.||+|..+.+++         .+|+|++.......      .  |+.....+ +|+||+++++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~   76 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQK---------LFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYY   76 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCc---------EEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEE
Confidence            567776666  999999999999887765         49999987542211      1  22222222 7999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEecc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDF  235 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Df  235 (451)
                      .+..++..|+||||++|++|.+++...  ..+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+||
T Consensus        77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~df  154 (267)
T PHA03390         77 SVTTLKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDY  154 (267)
T ss_pred             EEecCCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence            999999999999999999999998775  3699999999999999999999999999999999999999998 9999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                           .....|+..|+||
T Consensus       155 g~~~~~~~-----------------------------------------------------------~~~~~~~~~y~aP  175 (267)
T PHA03390        155 GLCKIIGT-----------------------------------------------------------PSCYDGTLDYFSP  175 (267)
T ss_pred             ccceecCC-----------------------------------------------------------CccCCCCCcccCh
Confidence            98742210                                                           0112578889999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++||||||+++|+|++|+.||........ ...+.... .......+ ..+..+.+||.+||+.||.+|+
T Consensus       176 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~  253 (267)
T PHA03390        176 EKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIK-NVSKNANDFVQSMLKYNINYRL  253 (267)
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCccc-ccCHHHHHHHHHHhccChhhCC
Confidence            999988899999999999999999999999986544332 12221111 11111112 3344899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCC
Q 013016          395 GSKRGAADVKTHPFFKG  411 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~  411 (451)
                      +.   ++++|+||||+.
T Consensus       254 ~~---~~~~l~h~~~~~  267 (267)
T PHA03390        254 TN---YNEIIKHPFLKI  267 (267)
T ss_pred             ch---HHHHhcCCcccC
Confidence            51   599999999974

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2.5e-41  Score=325.34  Aligned_cols=258  Identities=19%  Similarity=0.317  Sum_probs=207.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.+.||.|+||+||+|.+.....    ......+|+|.+....   ......+..|+.++++++|+||+++++++.
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~----~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   77 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCP----EQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCV   77 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCC----CCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            679999999999999999998644221    1122358999987542   233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP-----------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      ..+..++||||+++++|.+++....           ...+++..++.++.||+.||+|||++|++||||||+|||++.++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~  157 (288)
T cd05093          78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  157 (288)
T ss_pred             cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence            9999999999999999999887542           23489999999999999999999999999999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .++|+|||++.......                                                     .........+
T Consensus       158 ~~kl~dfg~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  184 (288)
T cd05093         158 LVKIGDFGMSRDVYSTD-----------------------------------------------------YYRVGGHTML  184 (288)
T ss_pred             cEEeccCCccccccCCc-----------------------------------------------------eeecCCCCCc
Confidence            99999999974221000                                                     0000011245


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+..+......    ...+.++.+|+.+||+
T Consensus       185 ~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~  260 (288)
T cd05093         185 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP----RTCPKEVYDLMLGCWQ  260 (288)
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcc
Confidence            678999999998889999999999999999998 99999888777777777766532211    1234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHc
Q 013016          388 KDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~  405 (451)
                      .||.+||+    +.+++.
T Consensus       261 ~~p~~Rpt----~~~v~~  274 (288)
T cd05093         261 REPHMRLN----IKEIHS  274 (288)
T ss_pred             CChhhCCC----HHHHHH
Confidence            99999999    888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.4e-41  Score=326.03  Aligned_cols=258  Identities=25%  Similarity=0.384  Sum_probs=204.1

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||.|++|.||+|.+..+++         .||||++.....  ......+..|+.++++++|+||+++++++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   69 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGE---------IVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHT   69 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCe---------EEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEee
Confidence            58999999999999999999877655         499999875422  2223455679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+..++||||+. ++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~  148 (284)
T cd07836          70 ENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLAR  148 (284)
T ss_pred             CCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence            999999999996 58888776543 3458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......++..|++||++.
T Consensus       149 ~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~~~  173 (284)
T cd07836         149 AFGIPV-------------------------------------------------------NTFSNEVVTLWYRAPDVLL  173 (284)
T ss_pred             hhcCCc-------------------------------------------------------cccccccccccccChHHhc
Confidence            321100                                                       0001125678899999987


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--------------CCCCCC----------CCcC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--------------FPTQSP----------SSMS  374 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------------~~~~~~----------~~~~  374 (451)
                      +. .++.++|||||||++|+|++|+.||......+....+......              +.....          ....
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
T cd07836         174 GSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHA  253 (284)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhc
Confidence            64 4688999999999999999999999887766555544321100              000000          0112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      +..+.++|.+||+.||.+||+    +.++++||||
T Consensus       254 ~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f  284 (284)
T cd07836         254 DPLGIDLLHRLLQLNPELRIS----AHDALQHPWF  284 (284)
T ss_pred             CcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence            347889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=6.3e-42  Score=330.22  Aligned_cols=260  Identities=26%  Similarity=0.347  Sum_probs=205.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||.|+||.||+|.++.+++         .+|+|.+...... ......+.+|+.+++++.||||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   73 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGE---------IVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVV   73 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCc---------EEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEE
Confidence            3679999999999999999999886655         4999999754322 22233456799999999999999999999


Q ss_pred             EeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ...  +..|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g  151 (293)
T cd07843          74 VGSNLDKIYMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFG  151 (293)
T ss_pred             EecCCCcEEEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecC
Confidence            877  89999999995 58988887653 358999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.......                                                       .......++..|+|||
T Consensus       152 ~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~aPE  176 (293)
T cd07843         152 LAREYGSPL-------------------------------------------------------KPYTQLVVTLWYRAPE  176 (293)
T ss_pred             ceeeccCCc-------------------------------------------------------cccccccccccccCch
Confidence            874322100                                                       0001125678899999


Q ss_pred             cccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--------------------------CCCC
Q 013016          317 VASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF--------------------------PTQS  369 (451)
Q Consensus       317 ~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~--------------------------~~~~  369 (451)
                      .+.+.. ++.++||||||+++|+|++|..||........+.++.......                          ....
T Consensus       177 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (293)
T cd07843         177 LLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKK  256 (293)
T ss_pred             hhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcc
Confidence            987654 6889999999999999999999998877666555443211100                          0000


Q ss_pred             CCCc-ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          370 PSSM-SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       370 ~~~~-~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+.. .+..+.+||++||+.||++|||    +.|+|.||||
T Consensus       257 ~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~~~~f  293 (293)
T cd07843         257 FPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALKHPYF  293 (293)
T ss_pred             ccccCCChHHHHHHHHHhccCccccCC----HHHHhcCCCC
Confidence            1111 2447899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-41  Score=324.57  Aligned_cols=258  Identities=28%  Similarity=0.457  Sum_probs=208.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC---CCCccceeEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD---HPFLPTLYAE  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~nIv~l~~~  157 (451)
                      .|++.+.||.|+||.||+|.+..+++         .||+|++....  .......+..|+.+++.+.   |+||++++++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~---------~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~   70 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGR---------VVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGS   70 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCc---------EEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeee
Confidence            47888999999999999999876655         49999986542  2233455677899999986   9999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +..+...|+||||++|++|.+++...   .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~  147 (277)
T cd06917          71 YLKGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGV  147 (277)
T ss_pred             eeeCCEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCc
Confidence            99999999999999999999988653   589999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                       .......|+..|+|||.
T Consensus       148 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~  172 (277)
T cd06917         148 AALLNQNS-------------------------------------------------------SKRSTFVGTPYWMAPEV  172 (277)
T ss_pred             eeecCCCc-------------------------------------------------------cccccccCCcceeCHHH
Confidence            74322100                                                       00112368889999999


Q ss_pred             ccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.++ .++.++|||||||++|+|++|..||...........+....  .+ .......+.++.+++.+||+.||.+||+ 
T Consensus       173 ~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~-  248 (277)
T cd06917         173 ITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PP-RLEDNGYSKLLREFVAACLDEEPKERLS-  248 (277)
T ss_pred             hccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CC-CCCcccCCHHHHHHHHHHcCCCcccCcC-
Confidence            8754 46889999999999999999999998765544443332221  11 1111123448999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCCc
Q 013016          397 KRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~  414 (451)
                         +.+++.|+||++...
T Consensus       249 ---~~~il~~~~~~~~~~  263 (277)
T cd06917         249 ---AEELLKSKWIKAHSK  263 (277)
T ss_pred             ---HHHHhhChHhhcccc
Confidence               999999999988554

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3.6e-41  Score=324.79  Aligned_cols=259  Identities=21%  Similarity=0.334  Sum_probs=207.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||.|+||.||+|.+......    .....+++|.+.....   .....+.+|+.++++++|+||+++++++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~----~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPT----KDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVC   76 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCC----CcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            46799999999999999999986543211    1223489999875432   2234566799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      ...+..++||||+++++|.+++....              .+.+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~  156 (291)
T cd05094          77 GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV  156 (291)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence            99999999999999999999987542              2348999999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.++|+|||++........                                                     .....
T Consensus       157 ~~~~~~~l~dfg~a~~~~~~~~-----------------------------------------------------~~~~~  183 (291)
T cd05094         157 GANLLVKIGDFGMSRDVYSTDY-----------------------------------------------------YRVGG  183 (291)
T ss_pred             ccCCcEEECCCCcccccCCCce-----------------------------------------------------eecCC
Confidence            9999999999999742211000                                                     00011


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      ...|+..|+|||.+.+..++.++|||||||++|+|++ |+.||......+....+..+.....    ....+..+.+++.
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~  259 (291)
T cd05094         184 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER----PRVCPKEVYDIML  259 (291)
T ss_pred             CCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCC----CccCCHHHHHHHH
Confidence            2356788999999999889999999999999999999 9999988877777776655543321    1223448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.||.+||+    +.++++
T Consensus       260 ~~l~~~P~~Rpt----~~~v~~  277 (291)
T cd05094         260 GCWQREPQQRLN----IKEIYK  277 (291)
T ss_pred             HHcccChhhCcC----HHHHHH
Confidence            999999999999    888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.3e-41  Score=330.12  Aligned_cols=258  Identities=17%  Similarity=0.219  Sum_probs=202.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+|++.+.||+|+||.||+|.+...+..     ....||+|++....  .......+..|+.+++.++|+||+++++++
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~   78 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGIC   78 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCc-----cceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            36799999999999999999997654331     11238999986432  223345677799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ... ..++|+||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        79 ~~~-~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          79 LTS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             cCC-CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccc
Confidence            765 5779999999999999987653 35889999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                     ........++..|+|||++
T Consensus       157 ~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~apE~~  183 (316)
T cd05108         157 KLLGADEK-----------------------------------------------------EYHAEGGKVPIKWMALESI  183 (316)
T ss_pred             ccccCCCc-----------------------------------------------------ceeccCCccceeecChHHh
Confidence            53221000                                                     0000011345679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |+.||.+....+.. .+.......+..   ...+.++.+++.+||..||++||+  
T Consensus       184 ~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps--  257 (316)
T cd05108         184 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQP---PICTIDVYMIMVKCWMIDADSRPK--  257 (316)
T ss_pred             ccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCCCCC---CCCCHHHHHHHHHHccCChhhCcC--
Confidence            99899999999999999999998 99999876655543 333333222221   223448999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.+++.+
T Consensus       258 --~~~l~~~  264 (316)
T cd05108         258 --FRELIIE  264 (316)
T ss_pred             --HHHHHHH
Confidence              8888875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-41  Score=325.36  Aligned_cols=258  Identities=27%  Similarity=0.380  Sum_probs=205.2

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.++||.|++|.||+|.++.+++         .||+|++..... .......+..|+.+++.++|+||+++++++...
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~---------~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~   70 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGE---------IVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSE   70 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCC---------EEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccC
Confidence            6778899999999999999876655         499999875432 122334566799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..|+||||+ +++|.+++.......+++..++.++.||+.||+|||+++++||||+|+||+++.++.++|+|||++...
T Consensus        71 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~  149 (283)
T cd07835          71 NKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAF  149 (283)
T ss_pred             CeEEEEEecc-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            9999999999 578999988765556999999999999999999999999999999999999999999999999997432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ....                                                       .......++..|+|||++.+.
T Consensus       150 ~~~~-------------------------------------------------------~~~~~~~~~~~~~aPE~~~~~  174 (283)
T cd07835         150 GVPV-------------------------------------------------------RTYTHEVVTLWYRAPEILLGS  174 (283)
T ss_pred             CCCc-------------------------------------------------------cccCccccccCCCCCceeecC
Confidence            1000                                                       000011467789999988764


Q ss_pred             -CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC------------------CC------CCCCCcChH
Q 013016          322 -SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF------------------PT------QSPSSMSEY  376 (451)
Q Consensus       322 -~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~------------------~~------~~~~~~~~~  376 (451)
                       .++.++||||||+++|+|++|+.||........+.++.+.....                  +.      .......+.
T Consensus       175 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (283)
T cd07835         175 RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDE  254 (283)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCH
Confidence             46889999999999999999999998876655544443321100                  00      000122334


Q ss_pred             HHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       377 ~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+.++|.+||+.||.+|||    ++|++.||||
T Consensus       255 ~~~~li~~~l~~~P~~Rpt----~~~il~~~~~  283 (283)
T cd07835         255 DGLDLLSKMLVYDPAKRIS----AKAALQHPYF  283 (283)
T ss_pred             HHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence            7899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-42  Score=352.27  Aligned_cols=258  Identities=26%  Similarity=0.414  Sum_probs=207.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      .+++|.+.|.+|||+.||+|.+.+.+.+         ||+|.+...   +....+.+.+|+.+|++|. |+|||.+++..
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~---------~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss  104 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKK---------YALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSS  104 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCce---------eeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccc
Confidence            5699999999999999999999888543         999988644   5667788889999999996 99999999933


Q ss_pred             E-e---C---CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccCCC
Q 013016          159 E-A---S---NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       159 ~-~---~---~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~~~  229 (451)
                      . .   +   -.++|.||||+||+|-|+++.....+|++.++++|+.|+++|+.+||...  |||||||-+||||..+|.
T Consensus       105 ~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~  184 (738)
T KOG1989|consen  105 AINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN  184 (738)
T ss_pred             cccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC
Confidence            2 1   1   26789999999999999999777777999999999999999999999988  999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      .||||||.+.-.-..+.                  +.+.    ..+++     ..+                   ...-|
T Consensus       185 ~KLCDFGSatt~~~~~~------------------~~~e----~~~ve-----~eI-------------------~k~TT  218 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPT------------------SAQE----VNYVE-----EEI-------------------EKYTT  218 (738)
T ss_pred             EEeCcccccccccCCCc------------------cHHH----HHHHH-----HHH-------------------HhhCC
Confidence            99999998731110000                  0000    00000     000                   11568


Q ss_pred             CCccCcccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          310 HEYVSPEVA---SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       310 ~~y~aPE~~---~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +.|+|||.+   .|.+++.|+|||+|||+||.|+....||+....    ..|+.+...+|...   .++..+.+||+.||
T Consensus       219 p~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~p---~ys~~l~~LI~~mL  291 (738)
T KOG1989|consen  219 PQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPFP---NYSDRLKDLIRTML  291 (738)
T ss_pred             ccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCCc---cHHHHHHHHHHHHh
Confidence            999999997   467789999999999999999999999986433    46788888888752   34458999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcC
Q 013016          387 NKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.||++||+    +-+++.+
T Consensus       292 ~~nP~~RPn----I~Qv~~~  307 (738)
T KOG1989|consen  292 QPNPDERPN----IYQVLEE  307 (738)
T ss_pred             ccCcccCCC----HHHHHHH
Confidence            999999999    7777654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=3.4e-41  Score=319.33  Aligned_cols=259  Identities=31%  Similarity=0.499  Sum_probs=214.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|++|.||+|.++.+++         .||+|++......  .....+..|+.++.+++|+||+++++++.
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~---------~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGK---------IYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFY   69 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCc---------EEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc
Confidence            368999999999999999999987655         4999998765322  34566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+..++||||+++++|.+++...  ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||.+
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~  147 (264)
T cd06623          70 KEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS  147 (264)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence            999999999999999999998765  568999999999999999999999 99999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......|+..|+|||.+
T Consensus       148 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~pE~~  172 (264)
T cd06623         148 KVLENTL-------------------------------------------------------DQCNTFVGTVTYMSPERI  172 (264)
T ss_pred             eecccCC-------------------------------------------------------CcccceeecccccCHhhh
Confidence            4321100                                                       000123578889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS---NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      .+..++.++||||||+++|+|++|+.||....   ..+....+.......   ......+..+.++|.+||..+|++||+
T Consensus       173 ~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~R~~  249 (264)
T cd06623         173 QGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPEFRDFISACLQKDPKKRPS  249 (264)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHHHHHHHHHHccCChhhCCC
Confidence            88888999999999999999999999998764   334444444332211   111213448999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCC
Q 013016          396 SKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~  413 (451)
                          +.++++||||+..+
T Consensus       250 ----~~~ll~~~~~~~~~  263 (264)
T cd06623         250 ----AAELLQHPFIKKAD  263 (264)
T ss_pred             ----HHHHHhCHHHHhcc
Confidence                99999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-41  Score=324.81  Aligned_cols=260  Identities=28%  Similarity=0.421  Sum_probs=206.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|++|.||+|.++.+.+         .||+|++..... .......+..|++++++++|+||+++++++.
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~---------~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   70 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGE---------IVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFR   70 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCc---------EEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEE
Confidence            369999999999999999999887655         499999875432 2333466778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||++++.|..+....  ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++.
T Consensus        71 ~~~~~~iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~  148 (288)
T cd07833          71 RKGRLYLVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFAR  148 (288)
T ss_pred             ECCEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence            999999999999877666555443  458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......|+..|+|||++.
T Consensus       149 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~~~PE~~~  174 (288)
T cd07833         149 ALRARPA------------------------------------------------------SPLTDYVATRWYRAPELLV  174 (288)
T ss_pred             ccCCCcc------------------------------------------------------ccccCcccccCCcCCchhc
Confidence            3221100                                                      0111236788899999998


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCC--------CCC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQ--------SPS  371 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~--------~~~  371 (451)
                      +. .++.++||||||+++|+|++|+.||......+.+..+......                   ++..        ..+
T Consensus       175 ~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (288)
T cd07833         175 GDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYP  254 (288)
T ss_pred             CCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcC
Confidence            88 7899999999999999999999999876555443332211000                   0000        011


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ...+.++.+||++||..||++||+    ++++++||||
T Consensus       255 ~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~f  288 (288)
T cd07833         255 GKVSSPALDFLKACLRMDPKERLT----CDELLQHPYF  288 (288)
T ss_pred             CccchHHHHHHHHHhccCchhccc----HHHHhcCCCC
Confidence            122448999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.5e-41  Score=318.65  Aligned_cols=250  Identities=25%  Similarity=0.316  Sum_probs=205.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|++|.||+|.+..+.          .||+|.+.....    ....+..|+.++++++|+||+++++++.
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~----------~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTT----------PVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCT   71 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCe----------EEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEe
Confidence            67999999999999999999876543          399999875422    2345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~  151 (261)
T cd05068          72 LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLAR  151 (261)
T ss_pred             cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence            99999999999999999999987655679999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||.+.
T Consensus       152 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068         152 VIKEDIY------------------------------------------------------EAREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             EccCCcc------------------------------------------------------cccCCCcCceeccCccccc
Confidence            4321000                                                      0000112345799999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |+.||........+..+..... .+.   +...+..+.+++.+||+.||.+||+   
T Consensus       178 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~li~~~l~~~P~~Rp~---  250 (261)
T cd05068         178 YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-MPC---PPGCPKELYDIMLDCWKEDPDDRPT---  250 (261)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCC---CCcCCHHHHHHHHHHhhcCcccCCC---
Confidence            8889999999999999999999 9999988777777766655422 111   1123348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.+|+.
T Consensus       251 -~~~l~~  256 (261)
T cd05068         251 -FETLQW  256 (261)
T ss_pred             -HHHHHH
Confidence             888764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-42  Score=307.44  Aligned_cols=264  Identities=20%  Similarity=0.276  Sum_probs=206.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      +.++|.+.++||+|||+.||++..-.+.+         +||+|.+....   .+..+...+|++..++++|||+++++++
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~---------~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh   86 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGH---------LYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDH   86 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCccc---------chhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHH
Confidence            44789999999999999999998655544         59999997653   3456677889999999999999999987


Q ss_pred             EEeC-----CeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccCC
Q 013016          158 FEAS-----NFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDG  228 (451)
Q Consensus       158 ~~~~-----~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~~  228 (451)
                      ...+     ...||+++|...|+|.+.+...+  +.-+++.++..|+.+|++||++||+..  ++||||||.|||+.+++
T Consensus        87 ~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~  166 (302)
T KOG2345|consen   87 QLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG  166 (302)
T ss_pred             HHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC
Confidence            6433     35899999999999999887653  345999999999999999999999999  99999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .++|.|||.+....                  .+...+...-.+.++-                            .-..
T Consensus       167 ~~vl~D~GS~~~a~------------------i~i~~~~~a~~lQe~a----------------------------~e~C  200 (302)
T KOG2345|consen  167 LPVLMDLGSATQAP------------------IQIEGSRQALRLQEWA----------------------------EERC  200 (302)
T ss_pred             ceEEEeccCccccc------------------eEeechHHHHHHHHHH----------------------------HHhC
Confidence            99999999874321                  0111111111111111                            1156


Q ss_pred             CCCccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          309 THEYVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--ETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       309 t~~y~aPE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      |..|+|||++.-   ...+.++|||||||+||+|+.|..||+..-.  ......+.++...+|....   .+..+.+||+
T Consensus       201 t~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~---yse~l~~lik  277 (302)
T KOG2345|consen  201 TIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSR---YSEALHQLIK  277 (302)
T ss_pred             CCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCC---ccHHHHHHHH
Confidence            888999999853   4568999999999999999999999975322  2233345555666665433   5558999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHcC
Q 013016          384 GLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .||+.||.+||+    +.+|+.+
T Consensus       278 ~mlqvdP~qRP~----i~~ll~~  296 (302)
T KOG2345|consen  278 SMLQVDPNQRPT----IPELLSK  296 (302)
T ss_pred             HHhcCCcccCCC----HHHHHHH
Confidence            999999999999    9999863

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.7e-42  Score=329.11  Aligned_cols=257  Identities=26%  Similarity=0.383  Sum_probs=209.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|...+.||.|+||.||+|.+...++         .||+|++.....  ......+..|+.++++++|+||+++++++.
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKE---------VVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYL   72 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCe---------EEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccc
Confidence            457788899999999999999876654         499999874422  234466778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+||||+++++|.+++..   ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06642          73 KGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAG  149 (277)
T ss_pred             cCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccc
Confidence            99999999999999999988764   458999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||++.
T Consensus       150 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  174 (277)
T cd06642         150 QLTDT-------------------------------------------------------QIKRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             cccCc-------------------------------------------------------chhhhcccCcccccCHHHhC
Confidence            32110                                                       00011235788899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+......   .. ....+.++.+++.+||..+|++||+    
T Consensus       175 ~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~li~~~l~~~p~~Rp~----  246 (277)
T cd06642         175 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TL-EGQYSKPFKEFVEACLNKDPRFRPT----  246 (277)
T ss_pred             cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CC-CcccCHHHHHHHHHHccCCcccCcC----
Confidence            988999999999999999999999999876555544443333211   11 1123347999999999999999999    


Q ss_pred             hHHHHcCCCcCCCC
Q 013016          400 AADVKTHPFFKGLN  413 (451)
Q Consensus       400 ~~ell~hp~~~~~~  413 (451)
                      +.+++.||||....
T Consensus       247 ~~~il~~~~~~~~~  260 (277)
T cd06642         247 AKELLKHKFITRYT  260 (277)
T ss_pred             HHHHHHhHHHHHHh
Confidence            99999999998743

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.4e-41  Score=327.24  Aligned_cols=264  Identities=27%  Similarity=0.365  Sum_probs=201.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.++||.|+||.||+|.++.+++         .||||++...... ......+..|+.++++++||||+++++++
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   80 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQ---------IVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEIC   80 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCc---------EEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEE
Confidence            4789999999999999999999887655         4999998644211 11223345689999999999999999998


Q ss_pred             EeCC--------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EASN--------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~~--------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ...+        ..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+
T Consensus        81 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~  158 (310)
T cd07865          81 RTKATPYNRYKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGIL  158 (310)
T ss_pred             ecccccccCCCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcE
Confidence            6554        459999999 568887776542 458999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++..........                                                   ........++.
T Consensus       159 kl~dfg~~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~  187 (310)
T cd07865         159 KLADFGLARAFSLSKNSK---------------------------------------------------PNRYTNRVVTL  187 (310)
T ss_pred             EECcCCCcccccCCcccC---------------------------------------------------CCCccCcccCc
Confidence            999999985332110000                                                   00011235788


Q ss_pred             CccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC-------------------CC--
Q 013016          311 EYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-------------------TQ--  368 (451)
Q Consensus       311 ~y~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~-------------------~~--  368 (451)
                      .|+|||.+.+.. ++.++||||||+++|+|++|..||...........+.......+                   ..  
T Consensus       188 ~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (310)
T cd07865         188 WYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQK  267 (310)
T ss_pred             cccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccc
Confidence            899999987654 68899999999999999999999987665443333222111000                   00  


Q ss_pred             ------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          369 ------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       369 ------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                            ......+..+.+||.+||..||.+|||    ++|+|+||||
T Consensus       268 ~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t----~~e~l~h~~f  310 (310)
T cd07865         268 RKVKERLKPYVKDPHALDLIDKLLVLDPAKRID----ADTALNHDFF  310 (310)
T ss_pred             hhhHHhcccccCCHHHHHHHHHHhcCChhhccC----HHHHhcCCCC
Confidence                  001112346789999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4.4e-41  Score=326.07  Aligned_cols=264  Identities=17%  Similarity=0.279  Sum_probs=208.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      ....++|.+.+.||.|+||.||+|.+......    ..+..||+|++.....  ......+..|+.+++++ +|+||+++
T Consensus        31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~  104 (302)
T cd05055          31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKS----DAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNL  104 (302)
T ss_pred             cccHHHeEEcceeeccCCeeEEEEEEecCCCC----CceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceE
Confidence            34447899999999999999999987432211    1233599999875422  23345677899999999 79999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++...+..++||||+++++|.+++.......+++.+++.++.||+.||.|||++||+|+||||+|||++.++.++|+|
T Consensus       105 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~d  184 (302)
T cd05055         105 LGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICD  184 (302)
T ss_pred             EEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECC
Confidence            99999999999999999999999999875555589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++........                                                     ........++..|+|
T Consensus       185 fg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~a  211 (302)
T cd05055         185 FGLARDIMNDSN-----------------------------------------------------YVVKGNARLPVKWMA  211 (302)
T ss_pred             CcccccccCCCc-----------------------------------------------------eeecCCCCcccccCC
Confidence            999743211000                                                     000011246678999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||.+.+..++.++|||||||++|+|++ |..||......+.+.+.........   .+...+.++.+|+.+||+.+|++|
T Consensus       212 PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~R  288 (302)
T cd05055         212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA---QPEHAPAEIYDIMKTCWDADPLKR  288 (302)
T ss_pred             HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCchhC
Confidence            999999889999999999999999998 9999988766655555544322211   112234489999999999999999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      |+    +.||++
T Consensus       289 pt----~~ell~  296 (302)
T cd05055         289 PT----FKQIVQ  296 (302)
T ss_pred             cC----HHHHHH
Confidence            99    888874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=6.2e-41  Score=322.24  Aligned_cols=257  Identities=28%  Similarity=0.437  Sum_probs=210.4

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|...+.||.|++|.||+|.++..++         .+|+|++.....   .....+.+|+.+++.+.|+||+++++++..
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~---------~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~   87 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGR---------QVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLV   87 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCC---------EEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEc
Confidence            45556789999999999999876654         399998864322   223456679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .++.|+|+||+.|++|.+++..   ..+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||++..
T Consensus        88 ~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~  164 (285)
T cd06648          88 GDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQ  164 (285)
T ss_pred             CCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchh
Confidence            9999999999999999998876   4589999999999999999999999999999999999999999999999998632


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                       ........|+..|+|||.+.+
T Consensus       165 ~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~  189 (285)
T cd06648         165 VSKE-------------------------------------------------------VPRRKSLVGTPYWMAPEVISR  189 (285)
T ss_pred             hccC-------------------------------------------------------CcccccccCCccccCHHHhcC
Confidence            1100                                                       000112368889999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++|||||||++|+|++|+.||...........+..........  ....+..+.+|+.+||+.||++||+    +
T Consensus       190 ~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt----~  263 (285)
T cd06648         190 LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKN--LHKVSPRLRSFLDRMLVRDPAQRAT----A  263 (285)
T ss_pred             CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcc--cccCCHHHHHHHHHHcccChhhCcC----H
Confidence            889999999999999999999999998877666666665543222111  1113348999999999999999999    9


Q ss_pred             HHHHcCCCcCCCC
Q 013016          401 ADVKTHPFFKGLN  413 (451)
Q Consensus       401 ~ell~hp~~~~~~  413 (451)
                      .++++||||++..
T Consensus       264 ~~il~~~~~~~~~  276 (285)
T cd06648         264 AELLNHPFLAKAG  276 (285)
T ss_pred             HHHccCcccccCC
Confidence            9999999999844

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.2e-41  Score=320.54  Aligned_cols=255  Identities=27%  Similarity=0.381  Sum_probs=205.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|++|.||+|.++.+++.         +|||.+.............+..|+.+++.++|+||+++++++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~---------~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   72 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVP---------VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI   72 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCce---------EEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE
Confidence            6799999999999999999998766553         9999887654444445567788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      .++..++||||+++++|.+++...  ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+
T Consensus        73 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~  152 (267)
T cd08229          73 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL  152 (267)
T ss_pred             eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchh
Confidence            999999999999999999988642  235689999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                       .......|+..|+|||+
T Consensus       153 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~ape~  177 (267)
T cd08229         153 GRFFSSKT-------------------------------------------------------TAAHSLVGTPYYMSPER  177 (267)
T ss_pred             hhccccCC-------------------------------------------------------cccccccCCcCccCHHH
Confidence            74321100                                                       00012368889999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++||||||+++|+|++|..||.....  ......+....  .+.. .....+..+.+++.+||..||.+|||
T Consensus       178 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt  254 (267)
T cd08229         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPL-PSDHYSEELRQLVNMCINPDPEKRPD  254 (267)
T ss_pred             hcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCC-CcccccHHHHHHHHHhcCCCcccCCC
Confidence            9988899999999999999999999999976433  23333333221  1111 11223448999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +.+|++
T Consensus       255 ----~~~i~~  260 (267)
T cd08229         255 ----ITYVYD  260 (267)
T ss_pred             ----HHHHHH
Confidence                887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.1e-42  Score=352.78  Aligned_cols=259  Identities=22%  Similarity=0.375  Sum_probs=215.6

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ...+.+..++||+|+||+||+|...+...    .+.-.+||||.++..  ...+...+|++|++++..++|||||+++|+
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p----~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLP----GQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCC----CccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            34678889999999999999998654431    122347999999866  344567889999999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      |.+++.+|+|+|||..|+|.++|....            ..+++..+...|+.||+.|+.||-++.+|||||-..|+||.
T Consensus       558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg  637 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG  637 (774)
T ss_pred             EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec
Confidence            999999999999999999999987532            12388899999999999999999999999999999999999


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      ++..|||+|||+++-.                                 |..+|+.                   ....+
T Consensus       638 e~l~VKIsDfGLsRdi---------------------------------YssDYYk-------------------~~~~t  665 (774)
T KOG1026|consen  638 ENLVVKISDFGLSRDI---------------------------------YSSDYYK-------------------VRGNT  665 (774)
T ss_pred             cceEEEecccccchhh---------------------------------hhhhhhc-------------------ccCCc
Confidence            9999999999998521                                 1111111                   00001


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                       .-...|||||.|+.+.|+.++|||||||+|||+++ |+.||.+.++++.+..+..+.+ ++   .+...+.++.+|+.+
T Consensus       666 -~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~---~Pe~CP~~vY~LM~~  740 (774)
T KOG1026|consen  666 -LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LS---CPENCPTEVYSLMLE  740 (774)
T ss_pred             -eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-cc---CCCCCCHHHHHHHHH
Confidence             23467999999999999999999999999999998 9999999999999999999876 22   233445589999999


Q ss_pred             hcccCcCCcCCCCCChHHH
Q 013016          385 LLNKDPCNRLGSKRGAADV  403 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~el  403 (451)
                      ||+.+|.+||+    +.||
T Consensus       741 CW~~~P~~RPs----F~eI  755 (774)
T KOG1026|consen  741 CWNENPKRRPS----FKEI  755 (774)
T ss_pred             HhhcCcccCCC----HHHH
Confidence            99999999999    7766

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.5e-41  Score=322.01  Aligned_cols=260  Identities=21%  Similarity=0.293  Sum_probs=207.6

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.+.||.|+||.||+|.++.....    .....||+|.+.....  ......+.+|+.+++.++|+||++++++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~----~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~   77 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKG----EPETRVAIKTVNENAS--MRERIEFLNEASVMKEFNCHHVVRLLGV   77 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCC----CcceeEEEEecCCccC--HHHHHHHHHHHHHHHhCCCCceeEEEEE
Confidence            347899999999999999999998754311    1123499999865421  2233456679999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP--------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~  229 (451)
                      +...+..++||||+++++|.+++....        ...+++..+..++.||+.||.|||++|++||||||+|||++.++.
T Consensus        78 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~  157 (277)
T cd05032          78 VSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT  157 (277)
T ss_pred             EcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC
Confidence            999999999999999999999886532        234788999999999999999999999999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++........                                                     ........++
T Consensus       158 ~kl~dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  184 (277)
T cd05032         158 VKIGDFGMTRDIYETDY-----------------------------------------------------YRKGGKGLLP  184 (277)
T ss_pred             EEECCcccchhhccCcc-----------------------------------------------------cccCCCCCcc
Confidence            99999999743211000                                                     0001122567


Q ss_pred             CCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcc
Q 013016          310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       310 ~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      ..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+..+.. ..+..     .+.++.+++.+||+
T Consensus       185 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~  259 (277)
T cd05032         185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPEN-----CPDKLLELMRMCWQ  259 (277)
T ss_pred             ccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCC-----CCHHHHHHHHHHcC
Confidence            78999999988889999999999999999998 9999988777777666664322 22221     24489999999999


Q ss_pred             cCcCCcCCCCCChHHHHc
Q 013016          388 KDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~  405 (451)
                      .+|++|||    +.+|+.
T Consensus       260 ~~p~~Rpt----~~~l~~  273 (277)
T cd05032         260 YNPKMRPT----FLEIVS  273 (277)
T ss_pred             CChhhCCC----HHHHHH
Confidence            99999999    998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=2.1e-41  Score=324.54  Aligned_cols=259  Identities=25%  Similarity=0.360  Sum_probs=202.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHH-HHHCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI-LKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||+|++........  ...+..|+.+ ++.++|+||+++++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~---------~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~   69 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGT---------IMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGAL   69 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCc---------EEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence            479999999999999999999887665         499999875432211  2233345554 6667899999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ..++..|+||||+ .++|.+++...  ....+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+||
T Consensus        70 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~df  148 (283)
T cd06617          70 FREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDF  148 (283)
T ss_pred             ecCCcEEEEhhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeec
Confidence            9999999999999 47888877643  235689999999999999999999997 9999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                        .......|+..|+||
T Consensus       149 g~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  172 (283)
T cd06617         149 GISGYLVDS--------------------------------------------------------VAKTIDAGCKPYMAP  172 (283)
T ss_pred             ccccccccc--------------------------------------------------------cccccccCCccccCh
Confidence            997421100                                                        000113578889999


Q ss_pred             ccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          316 EVASG----GSHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       316 E~~~~----~~~~~~~DIwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |.+.+    ..++.++|||||||++|+|++|+.||... ...+.+..+.... ...+.    ...+.++.+||.+||..+
T Consensus       173 E~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         173 ERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPA----EKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             hhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCc----cccCHHHHHHHHHHccCC
Confidence            98865    44688999999999999999999999753 2334444444332 11221    123448999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          390 PCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      |.+||+    +.+++.||||+....
T Consensus       249 p~~Rp~----~~~il~~~~~~~~~~  269 (283)
T cd06617         249 YKERPN----YPELLQHPFFELHLS  269 (283)
T ss_pred             hhhCcC----HHHHhcCchhhhccc
Confidence            999999    999999999999654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=4.5e-41  Score=326.68  Aligned_cols=257  Identities=25%  Similarity=0.348  Sum_probs=209.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.+.++||+|+||.||+|.+..+++         .||+|++.............+..|+.+++.++|+||+++++++.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~---------~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~   85 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL   85 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCc---------EEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE
Confidence            569999999999999999999876554         49999986543333444566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+. |+|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        86 ~~~~~~lv~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~  163 (307)
T cd06607          86 REHTAWLVMEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSAS  163 (307)
T ss_pred             eCCeEEEEHHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcce
Confidence            9999999999995 67777765432 458999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                           .....|+..|+|||++.
T Consensus       164 ~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~~  184 (307)
T cd06607         164 LVSP-----------------------------------------------------------ANSFVGTPYWMAPEVIL  184 (307)
T ss_pred             ecCC-----------------------------------------------------------CCCccCCccccCceeee
Confidence            2110                                                           01235778899999885


Q ss_pred             ---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 ---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                         ...++.++||||||+++|+|++|+.||...........+......  . ......+..+.++|.+||+.||++||+ 
T Consensus       185 ~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~li~~~l~~~p~~Rp~-  260 (307)
T cd06607         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--T-LSSNDWSDYFRNFVDSCLQKIPQDRPS-  260 (307)
T ss_pred             ccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC--C-CCchhhCHHHHHHHHHHhcCChhhCcC-
Confidence               345788999999999999999999999887666655544433211  1 111123448999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         +.+|+.||||....
T Consensus       261 ---~~~il~~~~~~~~~  274 (307)
T cd06607         261 ---SEELLKHRFVLRER  274 (307)
T ss_pred             ---HHHHhcChhhcccC
Confidence               99999999999843

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=5.1e-41  Score=323.08  Aligned_cols=269  Identities=39%  Similarity=0.717  Sum_probs=211.3

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +|.+.+.||.|++|.||+|.+.....      .+..||||++.+..... ......+..|+.++.++ +|+||+++++.+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~   74 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHD------AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF   74 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEecccc------CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee
Confidence            48899999999999999998653321      11249999997654322 23445677899999999 599999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++..|+||||+.+++|.+++...  ..+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~  152 (288)
T cd05583          75 QTDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLS  152 (288)
T ss_pred             ecCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccc
Confidence            9999999999999999999988654  45899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                      .........|+..|+|||.+
T Consensus       153 ~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE~~  178 (288)
T cd05583         153 KEFLAE------------------------------------------------------EEERAYSFCGTIEYMAPEVI  178 (288)
T ss_pred             cccccc------------------------------------------------------cccccccccCCccccCHHHh
Confidence            432110                                                      00011124688899999998


Q ss_pred             cCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          319 SGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSN----ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       319 ~~~~--~~~~~DIwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      .+..  .+.++||||||+++|+|++|..||.....    .+....+.......+.     ..+..+.++|.+||+.||++
T Consensus       179 ~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~  253 (288)
T cd05583         179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPK-----TMSAEARDFIQKLLEKDPKK  253 (288)
T ss_pred             cCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCc-----ccCHHHHHHHHHHhcCCHhh
Confidence            7755  68899999999999999999999964322    2233334333332222     23348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcccc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      |||... +.++|+||||+.++|..+
T Consensus       254 R~t~~~-~~~~l~~~~~~~~~~~~~  277 (288)
T cd05583         254 RLGANG-ADEIKNHPFFQGIDWDDL  277 (288)
T ss_pred             ccCcch-HHHHhcCcccccCCHHHH
Confidence            998432 678899999999999654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=3.5e-41  Score=324.89  Aligned_cols=262  Identities=18%  Similarity=0.278  Sum_probs=208.1

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~  156 (451)
                      ..++|++.+.||+|+||.||+|.++.....    .....+|+|++.....  ......+..|+.+++++ +|+||+++++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~----~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~   83 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNP----NETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLG   83 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCC----CCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            347799999999999999999988654311    1223599999875422  23345577899999999 7999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQ--------------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV  222 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NI  222 (451)
                      ++..++.+++||||+++|+|.+++...              ....+++..++.++.||+.||+|||++||+||||||+||
T Consensus        84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni  163 (293)
T cd05053          84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV  163 (293)
T ss_pred             EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence            999999999999999999999998652              235689999999999999999999999999999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      |++.++.+||+|||++........                                                     ...
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~-----------------------------------------------------~~~  190 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDY-----------------------------------------------------YRK  190 (293)
T ss_pred             EEcCCCeEEeCccccccccccccc-----------------------------------------------------eec
Confidence            999999999999999853221000                                                     000


Q ss_pred             ccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      .....++..|+|||++.+..++.++|||||||++|+|++ |..||......+.+..+.......   . +...+.++.+|
T Consensus       191 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~l  266 (293)
T cd05053         191 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRME---K-PQNCTQELYHL  266 (293)
T ss_pred             cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC---C-CCCCCHHHHHH
Confidence            001134567999999988889999999999999999997 999998877777666665543211   1 11223489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHcC
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.+||..||++|||    +.|++++
T Consensus       267 i~~~l~~~p~~Rps----~~eil~~  287 (293)
T cd05053         267 MRDCWHEVPSQRPT----FKQLVED  287 (293)
T ss_pred             HHHHcccCcccCcC----HHHHHHH
Confidence            99999999999999    9998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.1e-41  Score=327.53  Aligned_cols=259  Identities=26%  Similarity=0.424  Sum_probs=211.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|....+||.|+||.||+|.+...++         .||+|++.....   .....+.+|+.+++.+.||||+++++.+.
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~---------~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~   88 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGR---------QVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYL   88 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCC---------EEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhhee
Confidence            345666689999999999999876554         399999865422   22345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+||||+++++|.+++..   ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        89 ~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~  165 (297)
T cd06659          89 VGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCA  165 (297)
T ss_pred             eCCeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHh
Confidence            99999999999999999987755   458999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||++.
T Consensus       166 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  190 (297)
T cd06659         166 QISKD-------------------------------------------------------VPKRKSLVGTPYWMAPEVIS  190 (297)
T ss_pred             hcccc-------------------------------------------------------cccccceecCccccCHHHHc
Confidence            21100                                                       00011236888999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||......+.+..+........ .... ..+..+.++|.+||+.||.+||+    
T Consensus       191 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~i~~~l~~~P~~Rps----  264 (297)
T cd06659         191 RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNAH-KISPVLRDFLERMLTREPQERAT----  264 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCc-cccC-CCCHHHHHHHHHHhcCCcccCcC----
Confidence            88899999999999999999999999988776666665544322211 1112 23348999999999999999999    


Q ss_pred             hHHHHcCCCcCCCCc
Q 013016          400 AADVKTHPFFKGLNF  414 (451)
Q Consensus       400 ~~ell~hp~~~~~~~  414 (451)
                      +.++++||||.+.+.
T Consensus       265 ~~~ll~~~~~~~~~~  279 (297)
T cd06659         265 AQELLDHPFLLQTGL  279 (297)
T ss_pred             HHHHhhChhhccCCC
Confidence            999999999998544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.5e-41  Score=333.26  Aligned_cols=267  Identities=22%  Similarity=0.295  Sum_probs=205.0

Q ss_pred             eeeccC--CeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCe
Q 013016           86 RRIGAG--DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNF  163 (451)
Q Consensus        86 ~~LG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~  163 (451)
                      .+||.|  +||+||+|.+...++         .||+|++...... ....+.+..|+.+++.++|+||++++++|..+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~---------~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~   73 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGT---------LVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSW   73 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCc---------EEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCc
Confidence            346666  999999999877665         4999998754322 2344677789999999999999999999999999


Q ss_pred             EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCC
Q 013016          164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA  243 (451)
Q Consensus       164 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  243 (451)
                      .|+||||+.+++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.....
T Consensus        74 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~  153 (328)
T cd08226          74 LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVR  153 (328)
T ss_pred             eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhc
Confidence            99999999999999998876555699999999999999999999999999999999999999999999999986521110


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC--
Q 013016          244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG--  321 (451)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--  321 (451)
                      ....                                   ..        .     .........++..|+|||++.+.  
T Consensus       154 ~~~~-----------------------------------~~--------~-----~~~~~~~~~~~~~y~aPE~~~~~~~  185 (328)
T cd08226         154 NGQK-----------------------------------AK--------V-----VYDFPQFSTSVLPWLSPELLRQDLY  185 (328)
T ss_pred             cCcc-----------------------------------cc--------c-----cccccccccCccCccChhhhcCCCC
Confidence            0000                                   00        0     00000011355679999999774  


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC---------------------------------
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ---------------------------------  368 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------  368 (451)
                      .++.++|||||||++|+|++|+.||...................+..                                 
T Consensus       186 ~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (328)
T cd08226         186 GYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQ  265 (328)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccc
Confidence            47899999999999999999999998876655555444332211100                                 


Q ss_pred             ---------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          369 ---------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       369 ---------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                               ......+..+.+|+++||+.||++|||    +.|+|+||||.++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----a~e~l~~~~~~~~~~  316 (328)
T cd08226         266 TMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS----ASSLLSHAFFKQVKE  316 (328)
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHccCCcccCCC----HHHHhhCHHHHHHHH
Confidence                     001123347899999999999999999    999999999988544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.6e-41  Score=325.57  Aligned_cols=260  Identities=18%  Similarity=0.260  Sum_probs=208.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +.+|.+.++||.|+||.||+|.+..+..    .+.+..||+|++....  .......+..|+.++..++|+||+++++++
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~   77 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAP----GEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVV   77 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCC----CCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            4578899999999999999998765421    1123359999997542  122345577799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--------------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      ...+..++++||+.+++|.+++...              ....+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus        78 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~  157 (283)
T cd05091          78 TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV  157 (283)
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe
Confidence            9999999999999999999987532              12348889999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||++.......                                                     ......
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~-----------------------------------------------------~~~~~~  184 (283)
T cd05091         158 FDKLNVKISDLGLFREVYAAD-----------------------------------------------------YYKLMG  184 (283)
T ss_pred             cCCCceEecccccccccccch-----------------------------------------------------heeecc
Confidence            999999999999974321100                                                     000011


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      ...+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+........    +...+..+.+|+.
T Consensus       185 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~li~  260 (283)
T cd05091         185 NSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPC----PDDCPAWVYTLML  260 (283)
T ss_pred             CccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHH
Confidence            2246778999999988889999999999999999998 8999988877777777776654321    1223448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.+|.+||+    +.+|+.
T Consensus       261 ~cl~~~p~~RP~----~~~i~~  278 (283)
T cd05091         261 ECWNEFPSRRPR----FKDIHS  278 (283)
T ss_pred             HHhCCCcccCCC----HHHHHH
Confidence            999999999999    999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4.2e-41  Score=321.92  Aligned_cols=255  Identities=25%  Similarity=0.390  Sum_probs=209.9

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      -|++.++||.|+||.||+|.++.++.         .||||++.....  ......+.+|+.++++++|+||+++++++..
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~---------~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   73 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQK---------VVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK   73 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCc---------EEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe
Confidence            37888999999999999998876654         499999864422  2334567789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      +++.|+||||+++++|.+++..   ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        74 ~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~  150 (277)
T cd06641          74 DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ  150 (277)
T ss_pred             CCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeeccccee
Confidence            9999999999999999998864   3589999999999999999999999999999999999999999999999998742


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....                                                       ........|+..|+|||.+.+
T Consensus       151 ~~~~-------------------------------------------------------~~~~~~~~~~~~y~~PE~~~~  175 (277)
T cd06641         151 LTDT-------------------------------------------------------QIKRNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             cccc-------------------------------------------------------hhhhccccCCccccChhhhcc
Confidence            2100                                                       000012357888999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++|||||||++|+|++|..||...........+.......    .....+.++.+++.+||..+|.+||+    +
T Consensus       176 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~----~  247 (277)
T cd06641         176 SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPT----LEGNYSKPLKEFVEACLNKEPSFRPT----A  247 (277)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCC----CCcccCHHHHHHHHHHccCChhhCcC----H
Confidence            888999999999999999999999998766655555544332211    11223448999999999999999999    9


Q ss_pred             HHHHcCCCcCCC
Q 013016          401 ADVKTHPFFKGL  412 (451)
Q Consensus       401 ~ell~hp~~~~~  412 (451)
                      .+++.||||.+.
T Consensus       248 ~~~l~~~~~~~~  259 (277)
T cd06641         248 KELLKHKFIVRF  259 (277)
T ss_pred             HHHHhCHHHhhh
Confidence            999999999983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.8e-41  Score=327.54  Aligned_cols=257  Identities=20%  Similarity=0.313  Sum_probs=203.4

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +.+++|++.+.||.|+||.||+|.++.++..       ..+|+|.+....  .......+..|+.++.++ +|+||++++
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~-------~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~   74 (303)
T cd05088           4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLL   74 (303)
T ss_pred             cchhhceeeeeecCCCCceEEEEEEccCCce-------eeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEE
Confidence            3458899999999999999999998655432       126777765321  223345667799999999 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                      +++...+..|+||||+++++|.+++....              ...+++..++.++.||+.||+|||++|++||||||+|
T Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~N  154 (303)
T cd05088          75 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  154 (303)
T ss_pred             EEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe
Confidence            99999999999999999999999987542              2358899999999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++......                                                        .
T Consensus       155 ili~~~~~~kl~dfg~~~~~~~~--------------------------------------------------------~  178 (303)
T cd05088         155 ILVGENYVAKIADFGLSRGQEVY--------------------------------------------------------V  178 (303)
T ss_pred             EEecCCCcEEeCccccCcccchh--------------------------------------------------------h
Confidence            99999999999999997311000                                                        0


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......++..|+|||++.+..++.++|||||||++|+|+| |..||......+....+..... ..  .+. ..+.++.+
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~  254 (303)
T cd05088         179 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-LE--KPL-NCDDEVYD  254 (303)
T ss_pred             hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc-CC--CCC-CCCHHHHH
Confidence            0001124567999999988888999999999999999998 9999988776666665544321 11  111 12348999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |+.+||+.+|.+||+    +.+++.+
T Consensus       255 li~~~l~~~p~~Rp~----~~~il~~  276 (303)
T cd05088         255 LMRQCWREKPYERPS----FAQILVS  276 (303)
T ss_pred             HHHHHcCCChhhCcC----HHHHHHH
Confidence            999999999999999    8888864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=4.7e-41  Score=321.59  Aligned_cols=259  Identities=19%  Similarity=0.283  Sum_probs=204.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|++|.||+|.+......    .....||+|.+.....  ......+..|+.+++.++|+||+++++++.
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~----~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   79 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGD----AVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSF   79 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCC----CCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            6799999999999999999998762210    1122499998864421  223355777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CEE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPH-----KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIM  231 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~k  231 (451)
                      +.+..++||||++|++|.+++.....     ..+++..+..++.||+.||+|||++|++|+||||+||+++.++   .+|
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~k  159 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAK  159 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceE
Confidence            99999999999999999999876532     2589999999999999999999999999999999999998765   599


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                     ........++..
T Consensus       160 l~dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  186 (277)
T cd05036         160 IADFGMARDIYRASY-----------------------------------------------------YRKGGRAMLPIK  186 (277)
T ss_pred             eccCccccccCCccc-----------------------------------------------------eecCCCCCccHh
Confidence            999999853211000                                                     000001133457


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |+|||++.+..++.++|||||||++|+|++ |..||...........+..... ..+     ...+..+.+++.+||+.|
T Consensus       187 y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         187 WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP-----KGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             hCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC-----CCCCHHHHHHHHHHcCCC
Confidence            999999998889999999999999999997 9999998777666655544321 111     223348999999999999


Q ss_pred             cCCcCCCCCChHHHHcC
Q 013016          390 PCNRLGSKRGAADVKTH  406 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~h  406 (451)
                      |++||+    +.+|++|
T Consensus       262 p~~Rps----~~~vl~~  274 (277)
T cd05036         262 PEDRPN----FATILER  274 (277)
T ss_pred             cccCcC----HHHHHHH
Confidence            999999    9999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=6e-41  Score=316.55  Aligned_cols=255  Identities=28%  Similarity=0.444  Sum_probs=207.9

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH--HHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +|+..+.||+|++|+||+|.++.+++         .|++|++.....  ...+....+..|+.+++.++|+||+++++++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGD---------FFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE   71 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCc---------EEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE
Confidence            36778899999999999999876554         399999865321  1233456678899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+.+|+||||+++++|.+++...  ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~  149 (258)
T cd06632          72 REEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMA  149 (258)
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccc
Confidence            9999999999999999999998765  45899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                        ......|+..|+|||.+
T Consensus       150 ~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~pe~~  173 (258)
T cd06632         150 KQVVEFS--------------------------------------------------------FAKSFKGSPYWMAPEVI  173 (258)
T ss_pred             eeccccc--------------------------------------------------------cccccCCCcceeCHHHh
Confidence            4321100                                                        01123688889999998


Q ss_pred             cCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .... ++.++|+|||||++|+|++|+.||...........+.... ..+. .+ ...+..+.+|+.+||+.+|.+||+  
T Consensus       174 ~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~li~~~l~~~p~~Rp~--  248 (258)
T cd06632         174 AQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-ELPP-IP-DHLSDEAKDFILKCLQRDPSLRPT--  248 (258)
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-cCCC-cC-CCcCHHHHHHHHHHhhcCcccCcC--
Confidence            8766 8999999999999999999999998766555444443311 1111 11 223448999999999999999999  


Q ss_pred             CChHHHHcCCCc
Q 013016          398 RGAADVKTHPFF  409 (451)
Q Consensus       398 ~~~~ell~hp~~  409 (451)
                        +.+++.|||+
T Consensus       249 --~~~~l~~~~~  258 (258)
T cd06632         249 --AAELLEHPFV  258 (258)
T ss_pred             --HHHHhcCCCC
Confidence              9999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.3e-41  Score=325.47  Aligned_cols=258  Identities=26%  Similarity=0.378  Sum_probs=209.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+..+.+         .||+|.+.....   .....+..|+.+++.++||||+++++.+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~   85 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQ---------EVAIKQMNLQQQ---PKKELIINEILVMRENKHPNIVNYLDSY   85 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCC---------EEEEEEeccccc---hHHHHHHHHHHHHhhcCCCCeeehhhee
Confidence            3789999999999999999998766554         399999864322   2235567799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..|+|+||+++++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++
T Consensus        86 ~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~  162 (293)
T cd06647          86 LVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC  162 (293)
T ss_pred             eeCCcEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcce
Confidence            9999999999999999999988653   4789999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                       ........|++.|+|||.+
T Consensus       163 ~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~~PE~~  187 (293)
T cd06647         163 AQITPE-------------------------------------------------------QSKRSTMVGTPYWMAPEVV  187 (293)
T ss_pred             eccccc-------------------------------------------------------ccccccccCChhhcCchhh
Confidence            422100                                                       0001123688889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|||||||++|+|++|+.||........+..+.....  +........+..+.+++.+||..+|.+||+   
T Consensus       188 ~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~---  262 (293)
T cd06647         188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLEMDVEKRGS---  262 (293)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC--CCCCCccccCHHHHHHHHHHccCChhhCcC---
Confidence            888889999999999999999999999987655444333322211  111111122337899999999999999999   


Q ss_pred             ChHHHHcCCCcCCC
Q 013016          399 GAADVKTHPFFKGL  412 (451)
Q Consensus       399 ~~~ell~hp~~~~~  412 (451)
                       +.+++.|+||+..
T Consensus       263 -~~~il~h~~~~~~  275 (293)
T cd06647         263 -AKELLQHPFLKIA  275 (293)
T ss_pred             -HHHHhcCHHHhcC
Confidence             9999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-41  Score=329.55  Aligned_cols=263  Identities=25%  Similarity=0.364  Sum_probs=199.4

Q ss_pred             CceEEeeeccCCeeEEEEEEecc--ccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNN--KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .|.+.++||+|++|.||+|.++.  .++         .||+|++.............+..|+.+++.++||||+++++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~---------~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGK---------EYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVF   71 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCC---------eEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEE
Confidence            48899999999999999999876  333         4999999864322223345566799999999999999999999


Q ss_pred             EeC--CeEEEEEeeccCCchhhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc----CCC
Q 013016          159 EAS--NFSCIVMEFCSGGDLHSLRHKQP---HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS----DGH  229 (451)
Q Consensus       159 ~~~--~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~----~~~  229 (451)
                      ...  +.+|+||||++ ++|.+++....   ...+++..++.++.||+.||+|||++||+||||||+||+++.    ++.
T Consensus        72 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~  150 (316)
T cd07842          72 LEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGV  150 (316)
T ss_pred             eCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccce
Confidence            988  89999999995 56776664322   236899999999999999999999999999999999999999    899


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++........                                                    .........++
T Consensus       151 ~kl~Dfg~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~  178 (316)
T cd07842         151 VKIGDLGLARLFNAPLK----------------------------------------------------PLADLDPVVVT  178 (316)
T ss_pred             EEECCCccccccCCCcc----------------------------------------------------cccccCCcccc
Confidence            99999999853221100                                                    00011123678


Q ss_pred             CCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHhcCC-----------------
Q 013016          310 HEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---------TLRNIVKKP-----------------  362 (451)
Q Consensus       310 ~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~---------~~~~i~~~~-----------------  362 (451)
                      ..|+|||++.+. .++.++|||||||++|+|++|+.||.......         .+..++...                 
T Consensus       179 ~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  258 (316)
T cd07842         179 IWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEY  258 (316)
T ss_pred             ccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccc
Confidence            889999988774 57899999999999999999999997644321         111111100                 


Q ss_pred             ---------CCCCCCC----CC--CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          363 ---------LTFPTQS----PS--SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       363 ---------~~~~~~~----~~--~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                               ..++...    ..  ...+.++.+++.+||+.||++|||    +.|++.||||
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~eil~~~~f  316 (316)
T cd07842         259 DTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT----AEEALEHPYF  316 (316)
T ss_pred             hhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCCCC
Confidence                     0000000    00  023337899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2e-41  Score=325.72  Aligned_cols=261  Identities=25%  Similarity=0.314  Sum_probs=204.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ++|...++||+|+||.||++.+..+++         .||+|.+......  .....+..|+.++.++. |+||+++++++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~---------~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~   72 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGT---------IMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGAL   72 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCC---------EEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEE
Confidence            567788899999999999999887655         4999998754322  33456677899999986 99999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhh---hhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEec
Q 013016          159 EASNFSCIVMEFCSGGDLHSLR---HKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l---~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..++..++||||+ +++|.++.   .......+++..+..++.|++.||+|||+ .|++||||||+||+++.++.++|+|
T Consensus        73 ~~~~~~~~~~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~d  151 (288)
T cd06616          73 FREGDCWICMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCD  151 (288)
T ss_pred             ecCCcEEEEEecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEee
Confidence            9999999999998 55665543   22334669999999999999999999997 5999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                        .......|+..|+|
T Consensus       152 fg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~a  175 (288)
T cd06616         152 FGISGQLVDS--------------------------------------------------------IAKTRDAGCRPYMA  175 (288)
T ss_pred             cchhHHhccC--------------------------------------------------------CccccccCccCccC
Confidence            9997422100                                                        00011257888999


Q ss_pred             cccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          315 PEVASGG---SHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       315 PE~~~~~---~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      ||++.+.   .++.++|||||||++|+|++|+.||..... .+.+.++..+.. ..+.... ...+.++.+|+.+||+.|
T Consensus       176 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~  254 (288)
T cd06616         176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEE-REFSPSFVNFINLCLIKD  254 (288)
T ss_pred             HHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCC-CccCHHHHHHHHHHccCC
Confidence            9999876   589999999999999999999999976542 223333333322 1222111 223448999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCCCC
Q 013016          390 PCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      |++|||    +++|+.||||+...
T Consensus       255 p~~Rpt----~~~i~~~~~~~~~~  274 (288)
T cd06616         255 ESKRPK----YKELLEHPFIKDYE  274 (288)
T ss_pred             hhhCcC----HHHHhcChhhhchh
Confidence            999999    99999999998844

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=6e-41  Score=316.04  Aligned_cols=247  Identities=25%  Similarity=0.333  Sum_probs=197.4

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      ++||+|+||.||+|.++.+++         .||+|.+....  .......+..|++++++++|+||+++++++...+..|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~---------~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   69 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNT---------PVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY   69 (252)
T ss_pred             CccCcccCccEEEEEEecCCc---------eEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeE
Confidence            368999999999999876655         39999886442  2233456778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+++++|.+++... ...+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus        70 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  148 (252)
T cd05084          70 IVMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV  148 (252)
T ss_pred             EEEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccc
Confidence            999999999999998654 3458999999999999999999999999999999999999999999999999974211000


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                      .                                                     ........++..|+|||.+.+..++.
T Consensus       149 ~-----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~  175 (252)
T cd05084         149 Y-----------------------------------------------------ASTGGMKQIPVKWTAPEALNYGRYSS  175 (252)
T ss_pred             c-----------------------------------------------------cccCCCCCCceeecCchhhcCCCCCh
Confidence            0                                                     00000012345699999999888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      ++|||||||++|+|++ |..||...........+...... +   .+...+..+.+|+.+||+.||++||+    +.+++
T Consensus       176 ~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~  247 (252)
T cd05084         176 ESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL-P---CPELCPDAVYRLMERCWEYDPGQRPS----FSTVH  247 (252)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC-C---CcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            9999999999999998 99999877666655555443211 1   12233448999999999999999999    88886


Q ss_pred             c
Q 013016          405 T  405 (451)
Q Consensus       405 ~  405 (451)
                      +
T Consensus       248 ~  248 (252)
T cd05084         248 Q  248 (252)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.8e-41  Score=321.45  Aligned_cols=255  Identities=26%  Similarity=0.399  Sum_probs=200.1

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCC
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASN  162 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~  162 (451)
                      .+.+.||.|.||.||+|.++..     ....+..|+||++...  ......+.+..|++.+++++||||+++++++...+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~-----~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~   74 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQK-----DNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE   74 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEEST-----TTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS
T ss_pred             EEeeEEccCCCcEEEEEEEEcc-----cCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccc
Confidence            4678999999999999999831     1122345999999643  22334677788999999999999999999999888


Q ss_pred             eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccC
Q 013016          163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN  242 (451)
Q Consensus       163 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  242 (451)
                      ..++||||+++|+|.+++.......+++..+..|+.||+.||.|||+++++|+||+++|||++.++.+||+|||++....
T Consensus        75 ~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   75 PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999998756679999999999999999999999999999999999999999999999999975331


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCC
Q 013016          243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS  322 (451)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  322 (451)
                      ....                                                     ........+...|+|||.+.+..
T Consensus       155 ~~~~-----------------------------------------------------~~~~~~~~~~~~~~aPE~~~~~~  181 (259)
T PF07714_consen  155 EKSK-----------------------------------------------------YKNDSSQQLPLRYLAPEVLKDGE  181 (259)
T ss_dssp             TSSS-----------------------------------------------------EEESTTSESGGGGS-HHHHHHSE
T ss_pred             cccc-----------------------------------------------------ccccccccccccccccccccccc
Confidence            1000                                                     00001124566799999998888


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChH
Q 013016          323 HGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA  401 (451)
Q Consensus       323 ~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~  401 (451)
                      ++.++||||||+++|||++ |+.||......+....+..+.....    +...+..+.++|.+||+.||.+||+    +.
T Consensus       182 ~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~C~~~~p~~RPs----~~  253 (259)
T PF07714_consen  182 YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI----PDNCPKDIYSLIQQCWSHDPEKRPS----FQ  253 (259)
T ss_dssp             ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS----BTTSBHHHHHHHHHHT-SSGGGS------HH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccee----ccchhHHHHHHHHHHcCCChhhCcC----HH
Confidence            9999999999999999999 7899998888887777755433221    1223448999999999999999999    99


Q ss_pred             HHHc
Q 013016          402 DVKT  405 (451)
Q Consensus       402 ell~  405 (451)
                      +|++
T Consensus       254 ~i~~  257 (259)
T PF07714_consen  254 EILQ  257 (259)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=7.6e-41  Score=325.07  Aligned_cols=262  Identities=19%  Similarity=0.284  Sum_probs=205.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|.+.+.||+|+||.||+|.+....+.  ....+..+|+|++....  .......+..|+.+++.+ +|+||++++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~--~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKE--KPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCc--ccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            36799999999999999999987543221  11222359999997542  123345677799999999 79999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPH--------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      +...+..|+||||+++++|.+++.....              ..+++..+..++.||+.||+|||++|++||||||+|||
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  172 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  172 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence            9999999999999999999999976421              34889999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.+||+|||++........                                                     ....
T Consensus       173 l~~~~~~kL~dfg~a~~~~~~~~-----------------------------------------------------~~~~  199 (307)
T cd05098         173 VTEDNVMKIADFGLARDIHHIDY-----------------------------------------------------YKKT  199 (307)
T ss_pred             EcCCCcEEECCCcccccccccch-----------------------------------------------------hhcc
Confidence            99999999999999742211000                                                     0000


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+......   ..+ ...+.++.+|+
T Consensus       200 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~li  275 (307)
T cd05098         200 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKP-SNCTNELYMMM  275 (307)
T ss_pred             ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCC---CCC-CcCCHHHHHHH
Confidence            01134567999999998889999999999999999998 99999877666666655544321   111 12334899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHc
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+||..+|.+||+    +.++++
T Consensus       276 ~~~l~~~p~~Rps----~~evl~  294 (307)
T cd05098         276 RDCWHAVPSQRPT----FKQLVE  294 (307)
T ss_pred             HHHcccChhhCcC----HHHHHH
Confidence            9999999999999    888875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.2e-40  Score=313.83  Aligned_cols=256  Identities=32%  Similarity=0.516  Sum_probs=214.3

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.+..+..         .||+|++...... ......+..|+++++.++|+|++++++.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~   70 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGK---------LYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEE   70 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCc---------EEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEec
Confidence            58899999999999999999876554         4999999754321 2334556779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+..++|+|++++++|.+++....  ...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~  150 (258)
T cd08215          71 KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGIS  150 (258)
T ss_pred             CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccce
Confidence            999999999999999999887754  467999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......|++.|+|||.+
T Consensus       151 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~pe~~  175 (258)
T cd08215         151 KVLSSTV-------------------------------------------------------DLAKTVVGTPYYLSPELC  175 (258)
T ss_pred             eecccCc-------------------------------------------------------ceecceeeeecccChhHh
Confidence            4321100                                                       011123688889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++||||||+++|+|++|+.||...........+.........    ...+..+.+++.+||..+|++||+   
T Consensus       176 ~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~---  248 (258)
T cd08215         176 QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIP----SQYSSELRNLVSSLLQKDPEERPS---  248 (258)
T ss_pred             ccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcC---
Confidence            8888999999999999999999999999887777776666655432211    123448999999999999999999   


Q ss_pred             ChHHHHcCCCc
Q 013016          399 GAADVKTHPFF  409 (451)
Q Consensus       399 ~~~ell~hp~~  409 (451)
                       +.++|+||||
T Consensus       249 -~~~ll~~~~~  258 (258)
T cd08215         249 -IAQILQSPFI  258 (258)
T ss_pred             -HHHHhcCCCC
Confidence             9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=3.5e-41  Score=319.14  Aligned_cols=250  Identities=25%  Similarity=0.364  Sum_probs=207.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.++||.|+||.||+|.++...          .+|+|++.....   .....+..|+.+++.++|+||+++++++.
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~----------~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   72 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRV----------RVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCS   72 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCC----------cEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEe
Confidence            57999999999999999999988733          399999876532   23345677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||+++++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~  152 (261)
T cd05148          73 VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLAR  152 (261)
T ss_pred             cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchh
Confidence            99999999999999999999987766779999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......++..|+|||.+.
T Consensus       153 ~~~~~~-------------------------------------------------------~~~~~~~~~~~~~~PE~~~  177 (261)
T cd05148         153 LIKEDV-------------------------------------------------------YLSSDKKIPYKWTAPEAAS  177 (261)
T ss_pred             hcCCcc-------------------------------------------------------ccccCCCCceEecCHHHHc
Confidence            321100                                                       0000124566799999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |+.||......+.+..+..... .+.  . ...+..+.+++.+||+.||.+|||   
T Consensus       178 ~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~i~~~l~~~p~~Rpt---  250 (261)
T cd05148         178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-MPC--P-AKCPQEIYKIMLECWAAEPEDRPS---  250 (261)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-CCC--C-CCCCHHHHHHHHHHcCCCchhCcC---
Confidence            8889999999999999999998 8999988877777777765422 111  1 223448999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.+|++
T Consensus       251 -~~~l~~  256 (261)
T cd05148         251 -FKALRE  256 (261)
T ss_pred             -HHHHHH
Confidence             888764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=9.7e-41  Score=322.19  Aligned_cols=266  Identities=20%  Similarity=0.309  Sum_probs=209.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEecccccc-------CCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQ-------DRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~-------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv  152 (451)
                      ++|++.++||+|+||.||+|.+......       .........||+|++.....  ......+..|++++++++|+||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCEe
Confidence            6899999999999999999998764422       12223345699999876532  23446677899999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP---------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      ++++++..++..++|||++++++|.+++....         ...+++..++.++.||+.||+|||++||+|+||||+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil  162 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL  162 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence            99999999999999999999999999987653         125899999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.++|+|||++.......                                                     .....
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~-----------------------------------------------------~~~~~  189 (296)
T cd05051         163 VGKNYTIKIADFGMSRNLYSSD-----------------------------------------------------YYRVQ  189 (296)
T ss_pred             ecCCCceEEccccceeecccCc-----------------------------------------------------ceeec
Confidence            9999999999999974321100                                                     00011


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhcC----CCCCCCCCCCCcChHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY--GRTPFAAPSNETTLRNIVKK----PLTFPTQSPSSMSEYH  377 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~  377 (451)
                      ....++..|+|||++.+..++.++|||||||++|+|++  |..||........+..+...    ...... ..+...+.+
T Consensus       190 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  268 (296)
T cd05051         190 GRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYL-PRPPNCPKD  268 (296)
T ss_pred             CcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccC-CCccCCCHH
Confidence            12356778999999988889999999999999999998  78899877766666655432    111111 111223448


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.+++.+||+.||.+||+    +.||++
T Consensus       269 l~~li~~cl~~~p~~Rpt----~~el~~  292 (296)
T cd05051         269 IYELMLECWRRDEEDRPT----FREIHL  292 (296)
T ss_pred             HHHHHHHHhccChhcCCC----HHHHHH
Confidence            999999999999999999    999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-41  Score=318.04  Aligned_cols=250  Identities=22%  Similarity=0.327  Sum_probs=202.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.+.||+|+||.||+|.++...          .+|+|++.....    ....+..|+.++++++|+||+++++++.
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~----------~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKI----------DVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCT   69 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCc----------cEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            57899999999999999999876533          299999864322    1234566999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||++|++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||++.
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~  148 (256)
T cd05059          70 KQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLAR  148 (256)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccce
Confidence            9999999999999999999987653 368999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||.+.
T Consensus       149 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~Pe~~~  174 (256)
T cd05059         149 YVLDDQY------------------------------------------------------TSSQGTKFPVKWAPPEVFD  174 (256)
T ss_pred             ecccccc------------------------------------------------------cccCCCCCCccccCHHHhc
Confidence            3210000                                                      0000112345799999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |+.||......+....+.......   . +...+..+.+++.+||..+|++||+   
T Consensus       175 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~li~~cl~~~p~~Rpt---  247 (256)
T cd05059         175 YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLY---R-PKLAPTEVYTIMYSCWHEKPEDRPA---  247 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCC---C-CCCCCHHHHHHHHHHhcCChhhCcC---
Confidence            8889999999999999999999 899998877776666665442211   1 1223448999999999999999999   


Q ss_pred             ChHHHHcC
Q 013016          399 GAADVKTH  406 (451)
Q Consensus       399 ~~~ell~h  406 (451)
                       +.|+++.
T Consensus       248 -~~~~l~~  254 (256)
T cd05059         248 -FKKLLSQ  254 (256)
T ss_pred             -HHHHHHH
Confidence             9998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-41  Score=314.03  Aligned_cols=250  Identities=48%  Similarity=0.835  Sum_probs=210.6

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||.|+||.||+|.+...++         .+|+|++.+...........+..|+.++++++|+||+++++.+..++..|+|
T Consensus         1 lg~G~~~~v~~~~~~~~~~---------~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   71 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGK---------LYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLV   71 (250)
T ss_pred             CCCCCceEEEEEEECCCCc---------EEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEE
Confidence            6999999999999876554         4999999877655555666788899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV  247 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  247 (451)
                      |||+++++|.+++...  ..+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        72 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--  147 (250)
T cd05123          72 LEYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--  147 (250)
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--
Confidence            9999999999998775  358999999999999999999999999999999999999999999999999874321100  


Q ss_pred             CCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcch
Q 013016          248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV  327 (451)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  327 (451)
                                                                           .......|+..|+|||.+.+..++.++
T Consensus       148 -----------------------------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~  174 (250)
T cd05123         148 -----------------------------------------------------SRTNTFCGTPEYLAPEVLLGKGYGKAV  174 (250)
T ss_pred             -----------------------------------------------------CcccCCcCCccccChHHhCCCCCCchh
Confidence                                                                 011123678889999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCC
Q 013016          328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP  407 (451)
Q Consensus       328 DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp  407 (451)
                      |+||||+++|+|++|..||...........+......++...     +..+.+++++||..||++||+.+. ++++++||
T Consensus       175 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~  248 (250)
T cd05123         175 DWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFL-----SPEARDLISGLLQKDPTKRLGSGG-AEEIKAHP  248 (250)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCC
Confidence            999999999999999999988777666777766544444332     348999999999999999999222 29999999


Q ss_pred             Cc
Q 013016          408 FF  409 (451)
Q Consensus       408 ~~  409 (451)
                      ||
T Consensus       249 ~f  250 (250)
T cd05123         249 FF  250 (250)
T ss_pred             CC
Confidence            98

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.3e-40  Score=322.83  Aligned_cols=263  Identities=17%  Similarity=0.275  Sum_probs=207.8

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~  156 (451)
                      ..++|.+.+.||+|+||.||+|.+......  ....+..||+|++....  .......+..|+.+++.+ +|+||+++++
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~--~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKD--KPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCC--CCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            347899999999999999999986432211  11122359999987542  223345677899999999 8999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV  222 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NI  222 (451)
                      ++...+..|+||||+++++|.+++....              ...+++..+..++.||+.||.|||++|++||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            9999999999999999999999987642              23578889999999999999999999999999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      |++.++.+||+|||++........                                                     ...
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~-----------------------------------------------------~~~  195 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDY-----------------------------------------------------YKK  195 (304)
T ss_pred             EEcCCCcEEECCCccceecccccc-----------------------------------------------------ccc
Confidence            999999999999999853221100                                                     000


Q ss_pred             ccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      .....++..|+|||++.+..++.++||||||+++|+|++ |..||......+....+........    +...+.++.+|
T Consensus       196 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l  271 (304)
T cd05101         196 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK----PANCTNELYMM  271 (304)
T ss_pred             ccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCC----CCCCCHHHHHH
Confidence            111245678999999998889999999999999999998 8999988877777776655432211    11234489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHc
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.+||..+|.+||+    +.|+++
T Consensus       272 i~~cl~~~p~~Rps----~~e~l~  291 (304)
T cd05101         272 MRDCWHAIPSHRPT----FKQLVE  291 (304)
T ss_pred             HHHHcccChhhCCC----HHHHHH
Confidence            99999999999999    888876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=8.5e-41  Score=320.36  Aligned_cols=259  Identities=20%  Similarity=0.329  Sum_probs=206.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.++||+|+||.||+|.......    ...+..+|+|.+....   ......+..|+++++.++|+||+++++++
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLP----EQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVC   76 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCC----CCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEE
Confidence            4679999999999999999997643211    1122358999887542   23345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPH-------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      ...+..++||||+++++|.+++.....             ..+++..++.++.||+.||+|||++|++||||||+|||++
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~  156 (280)
T cd05092          77 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG  156 (280)
T ss_pred             ecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence            999999999999999999999876432             3488999999999999999999999999999999999999


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.++|+|||++.......                                                     .......
T Consensus       157 ~~~~~kL~dfg~~~~~~~~~-----------------------------------------------------~~~~~~~  183 (280)
T cd05092         157 QGLVVKIGDFGMSRDIYSTD-----------------------------------------------------YYRVGGR  183 (280)
T ss_pred             CCCCEEECCCCceeEcCCCc-----------------------------------------------------eeecCCC
Confidence            99999999999974321100                                                     0000011


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      ..+++.|+|||.+.+..++.++|||||||++|+|++ |..||......+.+..+..+.....   . ...+..+.+|+.+
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~  259 (280)
T cd05092         184 TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELER---P-RTCPPEVYAIMQG  259 (280)
T ss_pred             ccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCC---C-CCCCHHHHHHHHH
Confidence            245678999999999889999999999999999998 9999988777777766655532211   1 1233489999999


Q ss_pred             hcccCcCCcCCCCCChHHHHc
Q 013016          385 LLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ||..||.+||+    +.+|+.
T Consensus       260 cl~~~P~~Rp~----~~~l~~  276 (280)
T cd05092         260 CWQREPQQRMV----IKDIHS  276 (280)
T ss_pred             HccCChhhCCC----HHHHHH
Confidence            99999999999    888864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.2e-40  Score=322.06  Aligned_cols=254  Identities=19%  Similarity=0.283  Sum_probs=202.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||.|+||.||+|.++..+..       ..+++|.+....  .......+..|+.++.++ +||||+++++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~-------~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~   72 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLK-------MNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGAC   72 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCc-------ceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEE
Confidence            6899999999999999999988765431       126888876321  223345677799999999 799999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      ...+..|+||||+++++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill  152 (297)
T cd05089          73 ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV  152 (297)
T ss_pred             ccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE
Confidence            99999999999999999999986532              1348899999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||++......                                                        ....
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~--------------------------------------------------------~~~~  176 (297)
T cd05089         153 GENLASKIADFGLSRGEEVY--------------------------------------------------------VKKT  176 (297)
T ss_pred             CCCCeEEECCcCCCccccce--------------------------------------------------------eccC
Confidence            99999999999997311000                                                        0000


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      ...++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...+..+.+|+.
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~  252 (297)
T cd05089         177 MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEK----PRNCDDEVYELMR  252 (297)
T ss_pred             CCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCCHHHHHHHH
Confidence            0123456999999988889999999999999999997 9999998877777777665432111    1123348999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHcC
Q 013016          384 GLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +||+.||.+||+    ++++++.
T Consensus       253 ~~l~~~p~~Rp~----~~~i~~~  271 (297)
T cd05089         253 QCWRDRPYERPP----FAQISVQ  271 (297)
T ss_pred             HHcCCChhhCcC----HHHHHHH
Confidence            999999999999    8888643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=9.9e-41  Score=316.75  Aligned_cols=249  Identities=24%  Similarity=0.338  Sum_probs=202.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.+..+..          ||+|++.....    ....+..|++++++++|+||+++++.+.
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----------valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~   71 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS   71 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCce----------EEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC
Confidence            679999999999999999998765532          99999975322    1245677999999999999999999875


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                       .+..++||||+++++|.+++.......+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+.
T Consensus        72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~  150 (262)
T cd05071          72 -EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR  150 (262)
T ss_pred             -CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCcee
Confidence             4568999999999999999987655668999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||++.
T Consensus       151 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071         151 LIEDNEY------------------------------------------------------TARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             ecccccc------------------------------------------------------ccccCCcccceecCHhHhc
Confidence            3221100                                                      0000124567899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++|||||||++|+|++ |..||......+....+...... +.  . ...+..+.+|+.+||+.||++||+   
T Consensus       177 ~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~--~-~~~~~~l~~li~~~l~~~p~~Rp~---  249 (262)
T cd05071         177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-PC--P-PECPESLHDLMCQCWRKEPEERPT---  249 (262)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-CC--c-cccCHHHHHHHHHHccCCcccCCC---
Confidence            8889999999999999999999 89999887777776666554221 11  1 123348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.+++.
T Consensus       250 -~~~~~~  255 (262)
T cd05071         250 -FEYLQA  255 (262)
T ss_pred             -HHHHHH
Confidence             887763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=8.6e-41  Score=320.01  Aligned_cols=254  Identities=24%  Similarity=0.381  Sum_probs=198.1

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~  160 (451)
                      |.+.++||+|+||.||+|.++.+.+         .||+|++.+..... . ......|+.+++++. |+||+++++++.+
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~---------~~aik~~~~~~~~~-~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   69 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGK---------YYAIKCMKKHFKSL-E-QVNNLREIQALRRLSPHPNILRLIEVLFD   69 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCc---------EEEEEEehhccCCc-h-hhhHHHHHHHHhhcCCCCCccceEEEEec
Confidence            6789999999999999999876655         49999987542211 1 123346888888885 9999999999998


Q ss_pred             C--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          161 S--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       161 ~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .  +.+++||||+. ++|.+++.... ..+++..+..++.||+.||+|||++|++||||+|+||+++. +.+||+|||++
T Consensus        70 ~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~  146 (282)
T cd07831          70 RKTGRLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSC  146 (282)
T ss_pred             CCCCcEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccc
Confidence            7  89999999995 58877776543 45899999999999999999999999999999999999999 99999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                        .....++..|+|||++
T Consensus       147 ~~~~~~~~--------------------------------------------------------~~~~~~~~~y~aPE~~  170 (282)
T cd07831         147 RGIYSKPP--------------------------------------------------------YTEYISTRWYRAPECL  170 (282)
T ss_pred             cccccCCC--------------------------------------------------------cCCCCCCcccCChhHh
Confidence            43211000                                                        0012577889999987


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC------------------CCCCCCC------CCc
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL------------------TFPTQSP------SSM  373 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------------~~~~~~~------~~~  373 (451)
                      .+ ..++.++|||||||++|+|++|..||...+..+.+..+.....                  .++....      ...
T Consensus       171 ~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (282)
T cd07831         171 LTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN  250 (282)
T ss_pred             hcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccc
Confidence            54 4568899999999999999999999988766554444432110                  0111000      012


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+.++.+||.+||+.||++||+    +.+++.||||
T Consensus       251 ~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~  282 (282)
T cd07831         251 ASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF  282 (282)
T ss_pred             ccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence            2458999999999999999999    9999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.3e-40  Score=316.75  Aligned_cols=253  Identities=27%  Similarity=0.402  Sum_probs=198.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +++.....||+|+||.||+|.+..++.         .||+|.+.....   .....+.+|+.++++++|+||+++++++.
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~v~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   75 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQV---------RIAIKEIPERDS---RYVQPLHEEIALHSYLKHRNIVQYLGSDS   75 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCc---------EEEEEEecCCCH---HHHHHHHHHHHHHHhcCCCCeeeeeeeec
Confidence            445556689999999999999876654         499998865422   23456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRF--SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg  236 (451)
                      .++..++||||+++++|.+++.... ..+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg  154 (268)
T cd06624          76 ENGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFG  154 (268)
T ss_pred             cCCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecch
Confidence            9999999999999999999887642 234  88889999999999999999999999999999999986 6799999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                       ........|+..|+|||
T Consensus       155 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~~aPE  179 (268)
T cd06624         155 TSKRLAGI-------------------------------------------------------NPCTETFTGTLQYMAPE  179 (268)
T ss_pred             hheecccC-------------------------------------------------------CCccccCCCCccccChh
Confidence            87422100                                                       00001125788999999


Q ss_pred             cccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH--hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          317 VASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNI--VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       317 ~~~~~~--~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~~i--~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      ++.+..  ++.++||||||+++|+|++|+.||........ ....  ......++     ...+.++.+|+.+||+.+|.
T Consensus       180 ~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~  254 (268)
T cd06624         180 VIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIP-----ESLSAEAKNFILRCFEPDPD  254 (268)
T ss_pred             hhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCC-----cccCHHHHHHHHHHcCCCch
Confidence            987644  78899999999999999999999976433221 1111  11111112     22334899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCc
Q 013016          392 NRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~  409 (451)
                      +|||    +.|++.||||
T Consensus       255 ~Rpt----~~~ll~~~~~  268 (268)
T cd06624         255 KRAS----AHDLLQDPFL  268 (268)
T ss_pred             hCCC----HHHHHhCCCC
Confidence            9999    9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=6.2e-41  Score=336.21  Aligned_cols=265  Identities=19%  Similarity=0.263  Sum_probs=206.2

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~  153 (451)
                      +.+..++|.+.++||+|+||.||+|++++....    .....||||++.....  ....+.+..|+.++.++. |+||++
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~----~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~  105 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHS----QSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVN  105 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCC----CCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEE
Confidence            334447799999999999999999998643211    1122499999975422  223346778999999997 999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCC------------------------------------------------
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH------------------------------------------------  185 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~------------------------------------------------  185 (451)
                      +++++...+..|+||||+++|+|.++++....                                                
T Consensus       106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (401)
T cd05107         106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE  185 (401)
T ss_pred             EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence            99999999999999999999999999865321                                                


Q ss_pred             ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 013016          186 ------------------------------------------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDL  217 (451)
Q Consensus       186 ------------------------------------------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dl  217 (451)
                                                                      ..+++..+..++.||+.||+|||++|++||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl  265 (401)
T cd05107         186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL  265 (401)
T ss_pred             ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence                                                            23677888999999999999999999999999


Q ss_pred             CCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccc
Q 013016          218 KPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAE  297 (451)
Q Consensus       218 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (451)
                      ||+|||++.++.+||+|||++........                                                   
T Consensus       266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~---------------------------------------------------  294 (401)
T cd05107         266 AARNVLICEGKLVKICDFGLARDIMRDSN---------------------------------------------------  294 (401)
T ss_pred             CcceEEEeCCCEEEEEecCcceecccccc---------------------------------------------------
Confidence            99999999999999999999843211000                                                   


Q ss_pred             cccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChH
Q 013016          298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY  376 (451)
Q Consensus       298 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  376 (451)
                        ........|+..|+|||.+.+..++.++|||||||++|||++ |..||......+.+...+......+.   +...+.
T Consensus       295 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~---p~~~~~  369 (401)
T cd05107         295 --YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAK---PAHASD  369 (401)
T ss_pred             --cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCC---CCCCCH
Confidence              000112357788999999998889999999999999999998 89999876655554444333222211   122344


Q ss_pred             HHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          377 HARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       377 ~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ++.+|+.+||..+|.+||+    +.||++
T Consensus       370 ~l~~li~~cl~~~P~~RPs----~~ell~  394 (401)
T cd05107         370 EIYEIMQKCWEEKFEIRPD----FSQLVH  394 (401)
T ss_pred             HHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            8999999999999999999    888875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.3e-40  Score=319.07  Aligned_cols=257  Identities=14%  Similarity=0.168  Sum_probs=200.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||.|+||+||+|.+...++.     ....+++|.+....  .......+..|+.+++.+.|+||+++++++
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~-----~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~   78 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDS-----IKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGIC   78 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCc-----eeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            36799999999999999999998655431     01127788875331  223345666788889999999999999987


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      . ....++|+||+++|+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++
T Consensus        79 ~-~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~  156 (279)
T cd05111          79 P-GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVA  156 (279)
T ss_pred             C-CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence            5 456789999999999999987643 45899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                     ..........|+..|+|||.+
T Consensus       157 ~~~~~~-----------------------------------------------------~~~~~~~~~~~~~~y~~pE~~  183 (279)
T cd05111         157 DLLYPD-----------------------------------------------------DKKYFYSEHKTPIKWMALESI  183 (279)
T ss_pred             eeccCC-----------------------------------------------------CcccccCCCCCcccccCHHHh
Confidence            432100                                                     000011123567789999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |+.||.+.........+..+.....    +...+.++.+++.+||..||++||+  
T Consensus       184 ~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~c~~~~p~~Rps--  257 (279)
T cd05111         184 LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ----PQICTIDVYMVMVKCWMIDENVRPT--  257 (279)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC----CCCCCHHHHHHHHHHcCCCcccCcC--
Confidence            98889999999999999999998 9999988766554444433332211    1223447899999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.|+++
T Consensus       258 --~~el~~  263 (279)
T cd05111         258 --FKELAN  263 (279)
T ss_pred             --HHHHHH
Confidence              888865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.5e-41  Score=329.85  Aligned_cols=265  Identities=25%  Similarity=0.337  Sum_probs=211.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.+...++         .||||++..... .......+..|+.+++.++|+||+++++++..
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGR---------KVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRP   70 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCc---------EEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcc
Confidence            58999999999999999999876554         499999875431 23344567779999999999999999999987


Q ss_pred             CC-----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          161 SN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       161 ~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      .+     .+|+||||++ ++|.+++...  ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+||
T Consensus        71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~df  147 (330)
T cd07834          71 PSPEDFNDVYIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDF  147 (330)
T ss_pred             cCcccccceEEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccc
Confidence            75     8999999995 6888888664  36999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                    ........++..|+||
T Consensus       148 g~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~aP  175 (330)
T cd07834         148 GLARGVDPDEDE----------------------------------------------------KGFLTEYVVTRWYRAP  175 (330)
T ss_pred             CceEeecccccc----------------------------------------------------cccccccccccCcCCc
Confidence            998533211000                                                    0001123678889999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC------------------------
Q 013016          316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP------------------------  370 (451)
Q Consensus       316 E~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------  370 (451)
                      |++.+. .++.++||||||+++|+|++|+.||......+.+..+.......+....                        
T Consensus       176 E~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (330)
T cd07834         176 ELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLS  255 (330)
T ss_pred             eeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhH
Confidence            999887 7899999999999999999999999988776666555543221111000                        


Q ss_pred             --CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          371 --SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       371 --~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                        ....+.++.+||.+||++||.+||+    +++++.||||+++..
T Consensus       256 ~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~~~~~~~~~  297 (330)
T cd07834         256 KLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALAHPYLAQLHD  297 (330)
T ss_pred             HhcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCccHHhhcc
Confidence              0112347899999999999999999    999999999998443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.2e-41  Score=330.04  Aligned_cols=264  Identities=23%  Similarity=0.344  Sum_probs=204.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||.+..... .......+..|+.+++.++|+||+++++++.
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~   74 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNE---------KVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMP   74 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCC---------eEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHhee
Confidence            679999999999999999999876655         499999875321 2223345567999999999999999999886


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     .+.|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|
T Consensus        75 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~D  151 (337)
T cd07858          75 PPHREAFNDVYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICD  151 (337)
T ss_pred             cccccccCcEEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECc
Confidence            44     3589999999 57898888754  5599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++.......                                                       .......|+..|+|
T Consensus       152 fg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~a  176 (337)
T cd07858         152 FGLARTTSEKG-------------------------------------------------------DFMTEYVVTRWYRA  176 (337)
T ss_pred             CccccccCCCc-------------------------------------------------------ccccccccccCccC
Confidence            99985321100                                                       00112357888999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-----------------------CCCCC---
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP-----------------------LTFPT---  367 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-----------------------~~~~~---  367 (451)
                      ||.+.+ ..++.++|||||||++|+|++|+.||...+.......+....                       ...+.   
T Consensus       177 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (337)
T cd07858         177 PELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSF  256 (337)
T ss_pred             hHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCH
Confidence            998865 458899999999999999999999998765433322222100                       00000   


Q ss_pred             CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       368 ~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      .......+.++.+||++||+.||++||+    ++++++||||..+..+
T Consensus       257 ~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell~h~~~~~~~~~  300 (337)
T cd07858         257 ARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEALAHPYLASLHDP  300 (337)
T ss_pred             HHHcccCCHHHHHHHHHHhcCChhhccC----HHHHHcCcchhhhcCc
Confidence            0001123347899999999999999999    9999999999985444

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=4.2e-41  Score=330.84  Aligned_cols=268  Identities=24%  Similarity=0.331  Sum_probs=206.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|++|.||+|.++.+++         .||+|++..... .......+..|+.+++.++|+||+++++++.
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~---------~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   74 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGK---------KVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILR   74 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCC---------EEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhcc
Confidence            679999999999999999999887765         399999875422 2233455667999999999999999999886


Q ss_pred             e----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          160 A----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       160 ~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      .    ....|+||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+||
T Consensus        75 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~df  151 (334)
T cd07855          75 PPGADFKDVYVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDF  151 (334)
T ss_pred             ccCCCCceEEEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEeccc
Confidence            3    35789999999 56898887654  44999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                   .........|+..|+||
T Consensus       152 g~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~~P  180 (334)
T cd07855         152 GMARGLSSSPTE---------------------------------------------------HKYFMTEYVATRWYRAP  180 (334)
T ss_pred             ccceeecccCcC---------------------------------------------------CCcccccccccccccCh
Confidence            997432111000                                                   00011123688899999


Q ss_pred             ccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-----------------------CCCCCC--
Q 013016          316 EVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-----------------------TFPTQS--  369 (451)
Q Consensus       316 E~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----------------------~~~~~~--  369 (451)
                      |.+.+ ..++.++|||||||++|+|++|+.||...+....+..+.....                       ......  
T Consensus       181 E~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (334)
T cd07855         181 ELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWS  260 (334)
T ss_pred             HHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHH
Confidence            99866 4578999999999999999999999987654433322222100                       000000  


Q ss_pred             -CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 -PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 -~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                       .....+.++.++|.+||+.||.+||+    +.+++.||||++....
T Consensus       261 ~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~~~~~~~~  303 (334)
T cd07855         261 KIFPKASPEALDLLSQMLQFDPEERIT----VEQALQHPFLAQYHDP  303 (334)
T ss_pred             HHcccCCHHHHHHHHHHccCChhhCcC----HHHHHhChhhhhccCC
Confidence             00113448999999999999999999    9999999999974443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1e-40  Score=316.01  Aligned_cols=249  Identities=21%  Similarity=0.332  Sum_probs=202.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|..+.+.          .||+|.+.....    ....+..|+.++++++|+||+++++++.
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~----------~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~   71 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHT----------KVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT   71 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCc----------eEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence            67999999999999999999876543          399999875432    2345677999999999999999999874


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                       .+..++||||+.+++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.
T Consensus        72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067          72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence             5678999999999999999877666679999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||++.
T Consensus       151 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         151 LIEDNEY------------------------------------------------------TAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             ecCCCCc------------------------------------------------------ccccCCcccccccCHHHhc
Confidence            3211000                                                      0001124567899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |+.||.+....+....+...... +  . +...+.++.+++.+||+.+|++||+   
T Consensus       177 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~li~~~l~~~p~~Rp~---  249 (260)
T cd05067         177 YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM-P--R-PDNCPEELYELMRLCWKEKPEERPT---  249 (260)
T ss_pred             cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC-C--C-CCCCCHHHHHHHHHHccCChhhCCC---
Confidence            8889999999999999999999 99999887776666665444221 1  1 1223348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +++++.
T Consensus       250 -~~~l~~  255 (260)
T cd05067         250 -FEYLRS  255 (260)
T ss_pred             -HHHHHH
Confidence             888864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=9.7e-41  Score=316.20  Aligned_cols=249  Identities=24%  Similarity=0.344  Sum_probs=202.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||.|+||.||+|.+..+..          +|+|.+......    ...+.+|+.++++++|+||+++++++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~----------~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~   70 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTK----------VAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVV   70 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCce----------eEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEE
Confidence            3679999999999999999998765443          999998754321    23467799999999999999999988


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      . .+..++||||+++++|.+++.......+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++
T Consensus        71 ~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~  149 (260)
T cd05070          71 S-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLA  149 (260)
T ss_pred             C-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceee
Confidence            5 456899999999999999998765566899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                      .......++..|+|||.+
T Consensus       150 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~~  175 (260)
T cd05070         150 RLIEDNEY------------------------------------------------------TARQGAKFPIKWTAPEAA  175 (260)
T ss_pred             eeccCccc------------------------------------------------------ccccCCCCCccccChHHH
Confidence            43211000                                                      000012355679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++||||||+++|+|++ |..||......+....+...... +.   +...+..+.+|+.+||..||.+|||  
T Consensus       176 ~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~li~~~l~~~p~~Rpt--  249 (260)
T cd05070         176 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM-PC---PQDCPISLHELMLQCWKKDPEERPT--  249 (260)
T ss_pred             hcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CC---CCcCCHHHHHHHHHHcccCcccCcC--
Confidence            88889999999999999999999 99999887777777766554221 11   1223348999999999999999999  


Q ss_pred             CChHHHH
Q 013016          398 RGAADVK  404 (451)
Q Consensus       398 ~~~~ell  404 (451)
                        +++++
T Consensus       250 --~~~l~  254 (260)
T cd05070         250 --FEYLQ  254 (260)
T ss_pred             --HHHHH
Confidence              88876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.6e-40  Score=313.98  Aligned_cols=248  Identities=21%  Similarity=0.322  Sum_probs=202.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.+.||+|+||.||+|...+.           .||+|.+....     ....+..|+.++++++|+||++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-----------~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~   65 (256)
T cd05082           2 ALNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLL   65 (256)
T ss_pred             CccHHhCeeeeeecccCCCeEEEEEEcCC-----------cEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEE
Confidence            34557899999999999999999976543           39999986432     234567799999999999999999


Q ss_pred             EEEE-eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          156 AEFE-ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       156 ~~~~-~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      +++. ..+..++||||+++++|.+++.......+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|
T Consensus        66 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~d  145 (256)
T cd05082          66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSD  145 (256)
T ss_pred             EEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecC
Confidence            9764 556899999999999999998876555689999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                          .....++..|+|
T Consensus       146 fg~~~~~~~~----------------------------------------------------------~~~~~~~~~y~a  167 (256)
T cd05082         146 FGLTKEASST----------------------------------------------------------QDTGKLPVKWTA  167 (256)
T ss_pred             Cccceecccc----------------------------------------------------------CCCCccceeecC
Confidence            9997421100                                                          001134557999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+..++.++|||||||++|+|++ |+.||......+....+..+...   ... ...+..+.+++.+||+.||++|
T Consensus       168 PE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05082         168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAP-DGCPPVVYDVMKQCWHLDAATR  243 (256)
T ss_pred             HHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---CCC-CCCCHHHHHHHHHHhcCChhhC
Confidence            999988889999999999999999997 99999887766666666544221   111 2234489999999999999999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      ||    +.++++
T Consensus       244 pt----~~~l~~  251 (256)
T cd05082         244 PS----FLQLRE  251 (256)
T ss_pred             cC----HHHHHH
Confidence            99    888864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.3e-40  Score=320.58  Aligned_cols=258  Identities=18%  Similarity=0.294  Sum_probs=202.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.+.||+|+||.||+|.+......    .....+|+|++.....  ......+..|+.+++.++||||+++++.+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~----~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   74 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGR----AGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQ   74 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCC----CcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEec
Confidence            478899999999999999987543211    1223599999875432  2234567789999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQP----------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLK  218 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlk  218 (451)
                      .+..++||||+.+++|.+++....                      ...+++..+..++.|++.||+|||++|++|||||
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            999999999999999999876431                      2347899999999999999999999999999999


Q ss_pred             CCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccc
Q 013016          219 PENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP  298 (451)
Q Consensus       219 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (451)
                      |+|||++.++.+||+|||++........                                                    
T Consensus       155 p~nill~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------  182 (290)
T cd05045         155 ARNVLVAEGRKMKISDFGLSRDVYEEDS----------------------------------------------------  182 (290)
T ss_pred             hheEEEcCCCcEEeccccccccccCccc----------------------------------------------------
Confidence            9999999999999999999743211000                                                    


Q ss_pred             ccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHH
Q 013016          299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH  377 (451)
Q Consensus       299 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  377 (451)
                       ........++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+.... ..+.   +...+.+
T Consensus       183 -~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~  257 (290)
T cd05045         183 -YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-RMER---PENCSEE  257 (290)
T ss_pred             -hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-CCCC---CCCCCHH
Confidence             000011245667999999988889999999999999999998 999998877666555544332 1111   1223348


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.+|+.+||+.||++||+    +.++++
T Consensus       258 ~~~~i~~cl~~~P~~Rp~----~~~i~~  281 (290)
T cd05045         258 MYNLMLTCWKQEPDKRPT----FADISK  281 (290)
T ss_pred             HHHHHHHHccCCcccCCC----HHHHHH
Confidence            999999999999999999    888764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.9e-40  Score=311.15  Aligned_cols=257  Identities=32%  Similarity=0.483  Sum_probs=209.5

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.+..+++         .|++|++...... ......+..|+.++++++|+||+++++.+..
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGE---------LMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERD   70 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCc---------EEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEec
Confidence            47888999999999999999886555         3999999765432 3456777889999999999999999999998


Q ss_pred             C--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          161 S--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       161 ~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .  +..++|+||+++++|.+++....  .+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+
T Consensus        71 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~  148 (260)
T cd06606          71 EEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCA  148 (260)
T ss_pred             CCCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccE
Confidence            8  89999999999999999988764  6999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                     .......++..|+|||.+
T Consensus       149 ~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~y~~pE~~  175 (260)
T cd06606         149 KRLGDIETG-----------------------------------------------------EGTGSVRGTPYWMAPEVI  175 (260)
T ss_pred             Eeccccccc-----------------------------------------------------ccccCCCCCccccCHhhh
Confidence            533211100                                                     001123678889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++||||||+++|+|++|..||..... ......+.....  ...... ..+..+.+|+.+||+.||.+||+  
T Consensus       176 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~i~~~l~~~p~~Rp~--  250 (260)
T cd06606         176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPE-HLSEEAKDFLRKCLRRDPKKRPT--  250 (260)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC--CcCCCc-ccCHHHHHHHHHhCcCChhhCCC--
Confidence            888899999999999999999999999987652 223333322111  111111 22448999999999999999999  


Q ss_pred             CChHHHHcCCCc
Q 013016          398 RGAADVKTHPFF  409 (451)
Q Consensus       398 ~~~~ell~hp~~  409 (451)
                        +.+++.||||
T Consensus       251 --~~~ll~~~~~  260 (260)
T cd06606         251 --ADELLQHPFL  260 (260)
T ss_pred             --HHHHhhCCCC
Confidence              9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.1e-40  Score=327.97  Aligned_cols=279  Identities=22%  Similarity=0.292  Sum_probs=209.1

Q ss_pred             CCce-EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-----------HHHHHHHHHHHHHHCC
Q 013016           80 RDFD-LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-----------KVHRAEMEKKILKMLD  147 (451)
Q Consensus        80 ~~y~-~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~  147 (451)
                      ++|. +.+.||.|+||+||+|.++..++         .||||++.........           ....+..|+.+++.++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   78 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGK---------IVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK   78 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCC---------eEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC
Confidence            5565 45779999999999999876655         3999998654322100           1124567999999999


Q ss_pred             CCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       148 h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      |+||+++++++..+++.|+||||+. ++|.+++...  ..+++..+..++.||+.||.|||++|++|+||+|+||+++.+
T Consensus        79 h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~  155 (335)
T PTZ00024         79 HENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSK  155 (335)
T ss_pred             CcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCC
Confidence            9999999999999999999999995 6898888654  458999999999999999999999999999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +.++|+|||++...............                                 ...        ..........
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~~~~~---------------------------------~~~--------~~~~~~~~~~  194 (335)
T PTZ00024        156 GICKIADFGLARRYGYPPYSDTLSKD---------------------------------ETM--------QRREEMTSKV  194 (335)
T ss_pred             CCEEECCccceeeccccccccccccc---------------------------------ccc--------cccccccccc
Confidence            99999999998543321110000000                                 000        0000111225


Q ss_pred             cCCCccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC----------------
Q 013016          308 GTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP----------------  370 (451)
Q Consensus       308 gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~----------------  370 (451)
                      ++..|+|||.+.+.. ++.++|||||||++|+|++|+.||......+.+..+...........+                
T Consensus       195 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (335)
T PTZ00024        195 VTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK  274 (335)
T ss_pred             cccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCC
Confidence            678899999987744 689999999999999999999999988776666555432111110000                


Q ss_pred             -------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          371 -------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       371 -------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                             ....+.++.++|++||+.||++||+    ++|+|.||||++....
T Consensus       275 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~~~~~~~~~~~  322 (335)
T PTZ00024        275 PKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----AKEALKHEYFKSDPLP  322 (335)
T ss_pred             cccHHHhCcCCChHHHHHHHHHcCCCchhccC----HHHHhcCcccCCCCCC
Confidence                   0112447899999999999999999    9999999999985443

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.9e-40  Score=314.35  Aligned_cols=249  Identities=24%  Similarity=0.342  Sum_probs=202.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|++|.||+|.+.....          +|+|++.....    ....+..|+.++++++|+||+++++++.
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----------~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~   71 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTK----------VAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS   71 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCce----------EEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            679999999999999999998866542          99998865322    2245667999999999999999999875


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                       .+..|+||||+.+++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~  150 (260)
T cd05069          72 -EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR  150 (260)
T ss_pred             -CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccce
Confidence             4568999999999999999987655668999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||.+.
T Consensus       151 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~Pe~~~  176 (260)
T cd05069         151 LIEDNEY------------------------------------------------------TARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             EccCCcc------------------------------------------------------cccCCCccchhhCCHHHhc
Confidence            3211000                                                      0000123567799999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |..||.+....+....+...... +  .. ...+..+.+++.+||.+||.+||+   
T Consensus       177 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~li~~~l~~~p~~Rp~---  249 (260)
T cd05069         177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM-P--CP-QGCPESLHELMKLCWKKDPDERPT---  249 (260)
T ss_pred             cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-C--CC-cccCHHHHHHHHHHccCCcccCcC---
Confidence            8889999999999999999999 99999987777766666554221 1  11 123348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       ++++++
T Consensus       250 -~~~i~~  255 (260)
T cd05069         250 -FEYIQS  255 (260)
T ss_pred             -HHHHHH
Confidence             888764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-42  Score=289.14  Aligned_cols=260  Identities=27%  Similarity=0.402  Sum_probs=214.3

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.-.++||+|.||+||+|+.+++.+         .||+|.++.... ++..-....+|+.+++.+.|.|||+++++.-.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~e---------ivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhs   72 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHE---------IVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHS   72 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccc---------eEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhcc
Confidence            46667899999999999998877655         699999986532 22233445679999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ++.+-+|+||| ..+|.++.... ++.++.+.++.++.|+++||.|+|++++.||||||+|+||+.+|.+||+|||+++.
T Consensus        73 dkkltlvfe~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglara  150 (292)
T KOG0662|consen   73 DKKLTLVFEFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARA  150 (292)
T ss_pred             CceeEEeHHHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhh
Confidence            99999999999 88999888766 45699999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      +..+-                                              +-+.         .-+-|..|++|.++.|
T Consensus       151 fgipv----------------------------------------------rcys---------aevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  151 FGIPV----------------------------------------------RCYS---------AEVVTLWYRPPDVLFG  175 (292)
T ss_pred             cCCce----------------------------------------------Eeee---------ceeeeeeccCcceeee
Confidence            43210                                              0011         1256889999999999


Q ss_pred             CC-CCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcC-----------h------------
Q 013016          321 GS-HGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS-----------E------------  375 (451)
Q Consensus       321 ~~-~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------~------------  375 (451)
                      .. |+...|+||.|||+.|+.. |++.|.+.+.++.+++|...........|+.+.           +            
T Consensus       176 akly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~l  255 (292)
T KOG0662|consen  176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKL  255 (292)
T ss_pred             eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhh
Confidence            66 8999999999999999987 999999999999988887754433333322211           0            


Q ss_pred             -HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          376 -YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       376 -~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                       ..-++++.++|.-+|..|.+    +++.++||||..
T Consensus       256 ns~grdllqkll~cnp~qris----aeaalqhpyf~d  288 (292)
T KOG0662|consen  256 NSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFSD  288 (292)
T ss_pred             cchhHHHHHHHhccCcccccC----HHHHhcCccccc
Confidence             03479999999999999999    999999999986

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.1e-40  Score=317.31  Aligned_cols=257  Identities=16%  Similarity=0.216  Sum_probs=202.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||.|+||+||+|.+..++..     ....||+|++.....  ......+..|+.+++.++|+||+++++++
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-----~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   78 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGEN-----VKIPVAIKVLRENTS--PKANKEILDEAYVMAGVGSPYVCRLLGIC   78 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCc-----cceEEEEEEecCCCC--HHHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            36799999999999999999997765432     112389999875422  23345677799999999999999999998


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .. ...+++|||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        79 ~~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~  156 (279)
T cd05109          79 LT-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA  156 (279)
T ss_pred             cC-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCce
Confidence            75 45789999999999999887643 45899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                     .......++..|+|||.+
T Consensus       157 ~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~y~~PE~~  183 (279)
T cd05109         157 RLLDIDETE-----------------------------------------------------YHADGGKVPIKWMALESI  183 (279)
T ss_pred             eecccccce-----------------------------------------------------eecCCCccchhhCCHHHh
Confidence            533211000                                                     000011345679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |..||...........+..... .+.   +...+.++.+++.+||+.||+.||+  
T Consensus       184 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~li~~~l~~dp~~Rp~--  257 (279)
T cd05109         184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER-LPQ---PPICTIDVYMIMVKCWMIDSECRPR--  257 (279)
T ss_pred             ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-CCC---CccCCHHHHHHHHHHcCCChhhCcC--
Confidence            98889999999999999999998 9999987666555544444322 111   1123448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.+++.
T Consensus       258 --~~~l~~  263 (279)
T cd05109         258 --FRELVD  263 (279)
T ss_pred             --HHHHHH
Confidence              899884

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3.7e-40  Score=309.17  Aligned_cols=253  Identities=32%  Similarity=0.496  Sum_probs=209.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.+..+++         .+++|++.....   .....+..|+.+++.++|+||+++++++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   68 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGK---------EVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLK   68 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCc---------EEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            48889999999999999999876554         499999976533   344667779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..++++||++|++|.+++.... ..+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+..
T Consensus        69 ~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~  147 (253)
T cd05122          69 KDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQ  147 (253)
T ss_pred             CCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccc
Confidence            999999999999999999887753 4689999999999999999999999999999999999999999999999998743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ......                                                        .....|+..|+|||.+.+
T Consensus       148 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~PE~~~~  171 (253)
T cd05122         148 LSDTKA--------------------------------------------------------RNTMVGTPYWMAPEVING  171 (253)
T ss_pred             cccccc--------------------------------------------------------ccceecCCcccCHHHHcC
Confidence            211000                                                        113467888999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++||||||+++|+|++|+.||...........+.....  +........+..+.++|.+||+.||.+|||    +
T Consensus       172 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~  245 (253)
T cd05122         172 KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--PGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----A  245 (253)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--CCcCcccccCHHHHHHHHHHccCChhhCCC----H
Confidence            8889999999999999999999999988755554444433211  111122222448999999999999999999    9


Q ss_pred             HHHHcCCC
Q 013016          401 ADVKTHPF  408 (451)
Q Consensus       401 ~ell~hp~  408 (451)
                      .++++|||
T Consensus       246 ~~~l~~~~  253 (253)
T cd05122         246 EQLLKHPF  253 (253)
T ss_pred             HHHhcCCC
Confidence            99999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=3e-40  Score=313.50  Aligned_cols=255  Identities=28%  Similarity=0.373  Sum_probs=205.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+..+++         .||+|.+.............+.+|+.++++++|+||+++++++.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~   72 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGR---------VVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI   72 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCC---------EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee
Confidence            689999999999999999999886554         39999987543333444567788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..+..++||||+++++|.+++...  ....+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||+
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~  152 (267)
T cd08224          73 ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGL  152 (267)
T ss_pred             cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccce
Confidence            999999999999999999988653  234589999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                       .......|+..|+|||.
T Consensus       153 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~apE~  177 (267)
T cd08224         153 GRFFSSKT-------------------------------------------------------TAAHSLVGTPYYMSPER  177 (267)
T ss_pred             eeeccCCC-------------------------------------------------------cccceecCCccccCHHH
Confidence            74221000                                                       00012357888999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS--NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++|||||||++|+|++|+.||....  ..+....+..+....   ......+..+.++|.+||..+|++||+
T Consensus       178 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~cl~~~p~~Rp~  254 (267)
T cd08224         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP---LPADHYSEELRDLVSRCINPDPEKRPD  254 (267)
T ss_pred             hccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC---CChhhcCHHHHHHHHHHcCCCcccCCC
Confidence            998889999999999999999999999996543  223334443332211   111123448999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +.+|++
T Consensus       255 ----~~~il~  260 (267)
T cd08224         255 ----ISYVLQ  260 (267)
T ss_pred             ----HHHHHH
Confidence                888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-40  Score=313.43  Aligned_cols=251  Identities=25%  Similarity=0.339  Sum_probs=206.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||.|+||.||+|.+++..          .||||.+.....    ....+..|+.++++++|+||++++++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~----------~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~   69 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTT----------KVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAV   69 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCc----------eEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeee
Confidence            3478999999999999999999976543          299999875422    23456779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +......++||||+++++|.+++....+..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||+
T Consensus        70 ~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~  149 (261)
T cd05034          70 CSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGL  149 (261)
T ss_pred             eecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECcccc
Confidence            99989999999999999999999876666799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                      ........++..|+|||.
T Consensus       150 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~~PE~  175 (261)
T cd05034         150 ARLIEDDE------------------------------------------------------YTAREGAKFPIKWTAPEA  175 (261)
T ss_pred             ceeccchh------------------------------------------------------hhhhhccCCCccccCHHH
Confidence            74321100                                                      000001134567999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++|||||||++|+|++ |+.||.+......+..+..... ..+.     ..+.++.+++.+||+.+|.+||+
T Consensus       176 ~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~Rp~  250 (261)
T cd05034         176 ANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPP-----NCPEELYDLMLQCWDKDPEERPT  250 (261)
T ss_pred             hccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHcccCcccCCC
Confidence            998889999999999999999998 9999988777777777765432 1111     12348999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +++++.
T Consensus       251 ----~~~l~~  256 (261)
T cd05034         251 ----FEYLQS  256 (261)
T ss_pred             ----HHHHHH
Confidence                888763

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=2.8e-40  Score=322.19  Aligned_cols=262  Identities=19%  Similarity=0.276  Sum_probs=205.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|.+.++||+|+||.||+|......+.  .......+|+|++....  .......+..|+.+++++ +|+||++++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~--~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKS--RPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCc--cCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            36799999999999999999986543221  11223359999987542  223345677799999999 69999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      +...+..|+||||+++|+|.+++....              ...+++..+..++.||+.||.|||++|++||||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  166 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL  166 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence            999999999999999999999987642              245889999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.+||+|||++.........                                                     ...
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~-----------------------------------------------------~~~  193 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYY-----------------------------------------------------KKT  193 (314)
T ss_pred             EcCCCcEEEccccccccccccccc-----------------------------------------------------ccc
Confidence            999999999999998532110000                                                     000


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+.+..+.......   .. ...+.++.+|+
T Consensus       194 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~l~~li  269 (314)
T cd05099         194 SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMD---KP-SNCTHELYMLM  269 (314)
T ss_pred             ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CC-CCCCHHHHHHH
Confidence            01124457999999998889999999999999999999 999998877777776665543211   11 12233899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHc
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+||..||++||+    +.++++
T Consensus       270 ~~cl~~~p~~Rps----~~~ll~  288 (314)
T cd05099         270 RECWHAVPTQRPT----FKQLVE  288 (314)
T ss_pred             HHHcCCCcccCcC----HHHHHH
Confidence            9999999999999    888875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-40  Score=317.33  Aligned_cols=257  Identities=28%  Similarity=0.399  Sum_probs=202.9

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeEEE
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYAEF  158 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~~~  158 (451)
                      |++.+.||.|+||.||+|.++.+++         .||+|++..... .......+..|+.+++++   .|+||+++++++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~---------~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~   70 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGR---------FVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVC   70 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCC---------EEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEE
Confidence            6789999999999999999876544         499999974432 122223444577776655   699999999999


Q ss_pred             EeCCe-----EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          159 EASNF-----SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       159 ~~~~~-----~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ...+.     .+++|||+. ++|.+++.......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+
T Consensus        71 ~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~  149 (287)
T cd07838          71 HGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIA  149 (287)
T ss_pred             eeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEe
Confidence            88776     999999995 589888877655569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        .......++..|+
T Consensus       150 dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~  173 (287)
T cd07838         150 DFGLARIYSFE--------------------------------------------------------MALTSVVVTLWYR  173 (287)
T ss_pred             ccCcceeccCC--------------------------------------------------------ccccccccccccc
Confidence            99987432100                                                        0001124678899


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC----------------CCCCCCC------
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT----------------FPTQSPS------  371 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~----------------~~~~~~~------  371 (451)
                      |||++.+..++.++|||||||++|+|++|+.||......+.+.++......                ++.....      
T Consensus       174 ~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T cd07838         174 APEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFV  253 (287)
T ss_pred             ChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhh
Confidence            999999988999999999999999999999999988777766666542110                0000000      


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ...+..+.++|.+||+.||.+||+    +.+++.||||
T Consensus       254 ~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~~  287 (287)
T cd07838         254 PEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPYF  287 (287)
T ss_pred             hhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcCC
Confidence            011236789999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-40  Score=316.31  Aligned_cols=257  Identities=20%  Similarity=0.279  Sum_probs=202.2

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.+.||+|+||.||+|.+.....      ....||+|++..... .......+..|+.+++.++|+||+++++++...
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~------~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   73 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDG------SQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEA   73 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCC------CcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccC
Confidence            5678899999999999998765331      112499999875422 223345677899999999999999999988665


Q ss_pred             Ce------EEEEEeeccCCchhhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          162 NF------SCIVMEFCSGGDLHSLRHKQP----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       162 ~~------~~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      +.      .++||||+++++|..++....    ...+++..++.++.||+.||.|||++|++||||||+||++++++.+|
T Consensus        74 ~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k  153 (273)
T cd05035          74 SSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVC  153 (273)
T ss_pred             CccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEE
Confidence            54      799999999999998875432    24589999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                     ........++..
T Consensus       154 l~dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  180 (273)
T cd05035         154 VADFGLSKKIYSGDY-----------------------------------------------------YRQGRIAKMPVK  180 (273)
T ss_pred             ECCccceeecccccc-----------------------------------------------------ccccccccCCcc
Confidence            999999853211000                                                     000001134567


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||.+.+..++.++|||||||++|||++ |..||.+....+.+..+..+.....    +...+.++.+++.+||+.||
T Consensus       181 ~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p  256 (273)
T cd05035         181 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQ----PEDCLDELYDLMYSCWRADP  256 (273)
T ss_pred             ccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCCHHHHHHHHHHcCCCh
Confidence            999999988889999999999999999999 9999988877777777665532211    12234489999999999999


Q ss_pred             CCcCCCCCChHHHHcC
Q 013016          391 CNRLGSKRGAADVKTH  406 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~h  406 (451)
                      .+||+    +.|++++
T Consensus       257 ~~Rp~----~~e~~~~  268 (273)
T cd05035         257 KDRPT----FTKLREV  268 (273)
T ss_pred             hhCcC----HHHHHHH
Confidence            99999    8888753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-40  Score=327.04  Aligned_cols=260  Identities=27%  Similarity=0.370  Sum_probs=206.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||.|+||.||+|.+..++.         .||||++.... ........+..|+.+++.++|+||+++++++.
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   84 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGA---------KVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFT   84 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCc---------EEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeec
Confidence            679999999999999999999876655         49999986432 12233445677999999999999999999987


Q ss_pred             eCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ...      .+|+||||+ |++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+
T Consensus        85 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~  160 (343)
T cd07880          85 PDLSLDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKIL  160 (343)
T ss_pred             CCccccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe
Confidence            654      469999999 8899888764   458999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......+++.|+
T Consensus       161 dfg~~~~~~~----------------------------------------------------------~~~~~~~~~~y~  182 (343)
T cd07880         161 DFGLARQTDS----------------------------------------------------------EMTGYVVTRWYR  182 (343)
T ss_pred             eccccccccc----------------------------------------------------------CccccccCCccc
Confidence            9999742110                                                          001235788899


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC--------------------CC----
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP--------------------TQ----  368 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~--------------------~~----  368 (451)
                      |||.+.+ ..++.++|||||||++|+|++|+.||...........+.......+                    ..    
T Consensus       183 aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (343)
T cd07880         183 APEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKD  262 (343)
T ss_pred             CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcch
Confidence            9999876 4578999999999999999999999987665554444433211110                    00    


Q ss_pred             --CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          369 --SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       369 --~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                        ......+..+.++|.+||+.||.+|||    +.+++.||||+.....
T Consensus       263 ~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~~l~~~~~~~~~~~  307 (343)
T cd07880         263 FRSLLPNANPLAVNVLEKMLVLDAESRIT----AAEALAHPYFEEFHDP  307 (343)
T ss_pred             HHHhccCCChHHHHHHHHHcCCChhhCCC----HHHHhcCccHhhhcCc
Confidence              000122337899999999999999999    9999999999986443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-40  Score=311.53  Aligned_cols=259  Identities=27%  Similarity=0.404  Sum_probs=207.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH--HHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV--LEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+|.+.+.||+|+||.||+|.+..+++         .||+|++....  .........+.+|++++++++|+||++++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   72 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGR---------ELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGC   72 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCC---------EEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEE
Confidence            579999999999999999999877655         49999875321  1223445677889999999999999999999


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +.+.  +.+++||||+++++|.+++...  +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+||
T Consensus        73 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~df  150 (264)
T cd06653          73 LRDPEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDF  150 (264)
T ss_pred             EEcCCCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcc
Confidence            8764  5689999999999999988764  44899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    .......+.|+..|+||
T Consensus       151 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aP  178 (264)
T cd06653         151 GASKRIQTICM----------------------------------------------------SGTGIKSVTGTPYWMSP  178 (264)
T ss_pred             ccccccccccc----------------------------------------------------cCccccccCCcccccCH
Confidence            99753211000                                                    00000123688899999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||........+.++......  ...+. ..+..+.+++.+||. +|..||+
T Consensus       179 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~-~~~~~~~~~i~~~l~-~~~~r~~  254 (264)
T cd06653         179 EVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK--PMLPD-GVSDACRDFLKQIFV-EEKRRPT  254 (264)
T ss_pred             hhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC--CCCCc-ccCHHHHHHHHHHhc-CcccCcc
Confidence            9999888899999999999999999999999877666655555433211  11122 233489999999999 5799999


Q ss_pred             CCCChHHHHcCCCc
Q 013016          396 SKRGAADVKTHPFF  409 (451)
Q Consensus       396 ~~~~~~ell~hp~~  409 (451)
                          +.+++.|||.
T Consensus       255 ----~~~~~~~~~~  264 (264)
T cd06653         255 ----AEFLLRHPFV  264 (264)
T ss_pred             ----HHHHhcCCCC
Confidence                9999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.2e-40  Score=318.31  Aligned_cols=260  Identities=27%  Similarity=0.392  Sum_probs=214.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|++...||+|++|.||+|.+....+         .||+|++.....    ....+..|+++++.++|+||+++++.+.
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~   85 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGK---------EVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYL   85 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCc---------EEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEE
Confidence            669999999999999999999886554         399999975432    3455667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+|+||++|++|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~  164 (286)
T cd06614          86 VGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAA  164 (286)
T ss_pred             ECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhh
Confidence            9999999999999999999998753 369999999999999999999999999999999999999999999999999863


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|+..|+|||.+.
T Consensus       165 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~~PE~~~  189 (286)
T cd06614         165 QLTKE-------------------------------------------------------KSKRNSVVGTPYWMAPEVIK  189 (286)
T ss_pred             hhccc-------------------------------------------------------hhhhccccCCcccCCHhHhc
Confidence            21100                                                       00011235778899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+........  ......+..+.+||.+||+.+|.+||+    
T Consensus       190 ~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt----  263 (286)
T cd06614         190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL--KNPEKWSPEFKDFLNKCLVKDPEKRPS----  263 (286)
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--cchhhCCHHHHHHHHHHhccChhhCcC----
Confidence            88899999999999999999999999988776665555544332111  111223448999999999999999999    


Q ss_pred             hHHHHcCCCcCCCCc
Q 013016          400 AADVKTHPFFKGLNF  414 (451)
Q Consensus       400 ~~ell~hp~~~~~~~  414 (451)
                      +.+++.|+||++..+
T Consensus       264 ~~~il~~~~~~~~~~  278 (286)
T cd06614         264 AEELLQHPFLKKACP  278 (286)
T ss_pred             HHHHhhChHhhccCc
Confidence            999999999999433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-40  Score=319.44  Aligned_cols=267  Identities=21%  Similarity=0.296  Sum_probs=203.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccc-----cCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYR-----QDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~-----~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ++|++.++||+|+||.||+|.+.+...     ..........||+|++.....  ......+.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            689999999999999999998764321     001112223599999975422  2334567789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP----------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      ++++...+..++||||+++++|.+++....          ...+++..+..++.||+.||+|||++|++|+||||+||++
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill  162 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV  162 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence            999999999999999999999999886532          1236889999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||++.......                                                     ......
T Consensus       163 ~~~~~~kl~dfg~~~~~~~~~-----------------------------------------------------~~~~~~  189 (295)
T cd05097         163 GNHYTIKIADFGMSRNLYSGD-----------------------------------------------------YYRIQG  189 (295)
T ss_pred             cCCCcEEecccccccccccCc-----------------------------------------------------ceeccC
Confidence            999999999999974221000                                                     000011


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhc---CCCCCCCCCCCCcChHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY--GRTPFAAPSNETTLRNIVK---KPLTFPTQSPSSMSEYHAR  379 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~  379 (451)
                      ...++..|+|||++.+..++.++|||||||++|+|++  |..||......+.+..+..   ..........+...+..+.
T Consensus       190 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  269 (295)
T cd05097         190 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF  269 (295)
T ss_pred             cCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence            2245678999999998889999999999999999988  7788887766665554432   1100000111222344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +|+.+||+.||++||+    +++|++
T Consensus       270 ~li~~~l~~~p~~RPs----~~~i~~  291 (295)
T cd05097         270 KLMMRCWSRDIKDRPT----FNKIHH  291 (295)
T ss_pred             HHHHHHcCCCchhCcC----HHHHHH
Confidence            9999999999999999    888864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-41  Score=336.07  Aligned_cols=253  Identities=24%  Similarity=0.426  Sum_probs=209.0

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcch-HHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK-EVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      +...+||+|+|-+||+|.+...+-+         ||=-.+.. .........+++..|+.+|+.|+|+||+++|+.+.+.
T Consensus        43 k~~evLGrGafKtVYka~De~~giE---------VAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIE---------VAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT  113 (632)
T ss_pred             ehhhhcccccceeeeeccccccchh---------hHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence            3455799999999999999777644         33211111 1223455678899999999999999999999999765


Q ss_pred             C--eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccC-CCEEEeccC
Q 013016          162 N--FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSD-GHIMLSDFD  236 (451)
Q Consensus       162 ~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~-~~~kl~Dfg  236 (451)
                      .  .+.+|+|++..|+|..|+++.  +.++...++.|++||++||.|||++.  |||||||.+||+|+.+ |.|||+|+|
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLG  191 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG  191 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchh
Confidence            5  589999999999999999886  55899999999999999999999886  9999999999999966 899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|...+..                                                         ....++|||.|||||
T Consensus       192 LAtl~r~s---------------------------------------------------------~aksvIGTPEFMAPE  214 (632)
T KOG0584|consen  192 LATLLRKS---------------------------------------------------------HAKSVIGTPEFMAPE  214 (632)
T ss_pred             HHHHhhcc---------------------------------------------------------ccceeccCccccChH
Confidence            99654322                                                         222358999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.. ..|+..+||||||++|+||+|+..||.. .+.-.+++++..|..+-...   .+..+++++||.+||.. ..+|++
T Consensus       215 mYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~---kV~dPevr~fIekCl~~-~~~R~s  289 (632)
T KOG0584|consen  215 MYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS---KVKDPEVREFIEKCLAT-KSERLS  289 (632)
T ss_pred             HHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh---ccCCHHHHHHHHHHhcC-chhccC
Confidence            886 6899999999999999999999999976 56677888888876432221   22234999999999999 999999


Q ss_pred             CCCChHHHHcCCCcCCC
Q 013016          396 SKRGAADVKTHPFFKGL  412 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~  412 (451)
                          +.|||+||||+..
T Consensus       290 ----a~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  290 ----AKELLKDPFFDED  302 (632)
T ss_pred             ----HHHHhhChhhccc
Confidence                9999999999995

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.6e-40  Score=325.16  Aligned_cols=267  Identities=18%  Similarity=0.276  Sum_probs=208.7

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      +.+...+|.+.+.||+|+||.||+|.+....+..  ......||+|++....  .......+..|+.+++++ +|+||++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~   82 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDK--PNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIIN   82 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCcc--CCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            3344467999999999999999999875433211  1122348999887542  223456677899999999 7999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      +++++...+..++||||+++|+|.+++....              ...+++..+..++.||+.||.|||++|++||||||
T Consensus        83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp  162 (334)
T cd05100          83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA  162 (334)
T ss_pred             eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence            9999999999999999999999999987532              23478899999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +|||++.++.+||+|||++.........                                                    
T Consensus       163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~----------------------------------------------------  190 (334)
T cd05100         163 RNVLVTEDNVMKIADFGLARDVHNIDYY----------------------------------------------------  190 (334)
T ss_pred             ceEEEcCCCcEEECCcccceeccccccc----------------------------------------------------
Confidence            9999999999999999997432110000                                                    


Q ss_pred             cccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHH
Q 013016          300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                       .......++..|+|||++.+..++.++|||||||++|||++ |..||......+.+..+........   . ...+.++
T Consensus       191 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l  265 (334)
T cd05100         191 -KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK---P-ANCTHEL  265 (334)
T ss_pred             -ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC---C-CCCCHHH
Confidence             00001134567999999999889999999999999999998 8999988877777766655432111   1 1223489


Q ss_pred             HHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          379 RDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+|+.+||+.+|.+||+    +.|++++
T Consensus       266 ~~li~~cl~~~p~~Rps----~~ell~~  289 (334)
T cd05100         266 YMIMRECWHAVPSQRPT----FKQLVED  289 (334)
T ss_pred             HHHHHHHcccChhhCcC----HHHHHHH
Confidence            99999999999999999    8888875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5e-40  Score=310.48  Aligned_cols=247  Identities=23%  Similarity=0.324  Sum_probs=205.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||.|+||.||+|...+.           .||+|.+.....    ....+..|+.+++.++|+||++++++
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~~~-----------~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~   68 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYRGQ-----------KVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGV   68 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEecCc-----------EEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEE
Confidence            347899999999999999999987632           399999976532    34567779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+||||+++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.
T Consensus        69 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~  148 (256)
T cd05039          69 VLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGL  148 (256)
T ss_pred             EcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccc
Confidence            99999999999999999999999876555799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                          ....++..|+|||.
T Consensus       149 ~~~~~~~~----------------------------------------------------------~~~~~~~~~~ape~  170 (256)
T cd05039         149 AKEASQGQ----------------------------------------------------------DSGKLPVKWTAPEA  170 (256)
T ss_pred             cccccccc----------------------------------------------------------ccCCCcccccCchh
Confidence            74221000                                                          01124456999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++||||||+++|+|++ |..||......+....+..+...   ... ...+.++.++|.+||..+|++||+ 
T Consensus       171 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~li~~~l~~~p~~Rp~-  245 (256)
T cd05039         171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAP-EGCPPEVYKVMKDCWELDPAKRPT-  245 (256)
T ss_pred             hcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---CCc-cCCCHHHHHHHHHHhccChhhCcC-
Confidence            988889999999999999999997 99999887766666555543211   111 123448999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.||++
T Consensus       246 ---~~~l~~  251 (256)
T cd05039         246 ---FKQLRE  251 (256)
T ss_pred             ---HHHHHH
Confidence               888874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=6.1e-40  Score=310.85  Aligned_cols=251  Identities=22%  Similarity=0.339  Sum_probs=203.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||+|+||.||+|.+.....          +|+|.+....    .....+.+|+.++++++|+||+++++.
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~----------~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~   69 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAV   69 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCcc----------EEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence            34789999999999999999998665432          9999887542    223556779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.. ...++||||+++++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||.
T Consensus        70 ~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~  148 (260)
T cd05073          70 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL  148 (260)
T ss_pred             EcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcc
Confidence            887 7889999999999999999876666789999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                      .......++..|+|||+
T Consensus       149 ~~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~PE~  174 (260)
T cd05073         149 ARVIEDNEY------------------------------------------------------TAREGAKFPIKWTAPEA  174 (260)
T ss_pred             eeeccCCCc------------------------------------------------------ccccCCcccccccCHhH
Confidence            743211000                                                      00001135567999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|+|++ |..||...........+..+.. .+  .. ...+.++.+++.+||..+|++||+ 
T Consensus       175 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~i~~~l~~~p~~Rp~-  249 (260)
T cd05073         175 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MP--RP-ENCPEELYNIMMRCWKNRPEERPT-  249 (260)
T ss_pred             hccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-CC--Cc-ccCCHHHHHHHHHHcccCcccCcC-
Confidence            988889999999999999999999 9999988776666655554422 11  11 123348999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.+++.
T Consensus       250 ---~~~l~~  255 (260)
T cd05073         250 ---FEYIQS  255 (260)
T ss_pred             ---HHHHHH
Confidence               887763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-40  Score=311.13  Aligned_cols=252  Identities=25%  Similarity=0.353  Sum_probs=205.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||+|.+....      ..+..||+|++.......  ....+..|+.+++.++|+||+++++++...+..+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~------~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   72 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD------GKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLY   72 (262)
T ss_pred             CccccCCceEEEEEEEecCC------CCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceE
Confidence            36899999999999987641      011249999998664322  4567778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          166 IVMEFCSGGDLHSLRHKQP-------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +||||+++++|.+++....       ...+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+
T Consensus        73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~  152 (262)
T cd00192          73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLS  152 (262)
T ss_pred             EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccc
Confidence            9999999999999987752       356999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                     ........++..|+|||.+
T Consensus       153 ~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~aPE~~  179 (262)
T cd00192         153 RDVYDDDY-----------------------------------------------------YRKKTGGKLPIRWMAPESL  179 (262)
T ss_pred             cccccccc-----------------------------------------------------cccccCCCcCccccCHHHh
Confidence            53321100                                                     0011123577889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |..||......+....+..+....   .. ...+.++.+++.+||..||.+||+  
T Consensus       180 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~li~~~l~~~p~~Rps--  253 (262)
T cd00192         180 KDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLP---KP-EYCPDELYELMLSCWQLDPEDRPT--  253 (262)
T ss_pred             ccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CC-ccCChHHHHHHHHHccCCcccCcC--
Confidence            88889999999999999999999 699999987777777776532211   11 122348999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.|++++
T Consensus       254 --~~~l~~~  260 (262)
T cd00192         254 --FSELVER  260 (262)
T ss_pred             --HHHHHHh
Confidence              9999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.2e-40  Score=327.96  Aligned_cols=267  Identities=26%  Similarity=0.399  Sum_probs=206.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .+|+|.+.+... .......+..|+.+++++ +|+||+++++++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---------~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~   76 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKE---------VVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVI   76 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCe---------EEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeee
Confidence            779999999999999999999876554         499998854321 222334566799999999 999999999988


Q ss_pred             EeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ...  ..+|+||||++ ++|.+++...   .+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||
T Consensus        77 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g  152 (337)
T cd07852          77 KAENDKDIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG  152 (337)
T ss_pred             ccCCCceEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeecc
Confidence            654  47899999995 6898887653   58899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++..........                                                  .......+.|+..|+|||
T Consensus       153 ~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~y~aPE  182 (337)
T cd07852         153 LARSLSELEENP--------------------------------------------------ENPVLTDYVATRWYRAPE  182 (337)
T ss_pred             chhccccccccc--------------------------------------------------cCcchhcccccccccCce
Confidence            985322110000                                                  000111246889999999


Q ss_pred             cccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC---------------------------CCCC
Q 013016          317 VASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT---------------------------FPTQ  368 (451)
Q Consensus       317 ~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~---------------------------~~~~  368 (451)
                      .+.+ ..++.++|||||||++|+|++|+.||......+....+......                           ....
T Consensus       183 ~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (337)
T cd07852         183 ILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE  262 (337)
T ss_pred             eeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh
Confidence            8865 45788999999999999999999999876655444433222110                           0011


Q ss_pred             CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       369 ~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ..+. .+.++.++|.+||+.||++||+    +.++++||||++....
T Consensus       263 ~~~~-~~~~l~~li~~~l~~~P~~Rps----~~~il~~~~~~~~~~~  304 (337)
T cd07852         263 LLPK-ASDDALDLLKKLLVFNPNKRLT----AEEALEHPYVAQFHNP  304 (337)
T ss_pred             hccC-CCHHHHHHHHHhccCCcccccC----HHHHhhChhhhhhccC
Confidence            1111 3448999999999999999999    9999999999996554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2e-40  Score=322.99  Aligned_cols=266  Identities=22%  Similarity=0.285  Sum_probs=199.5

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCe
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNF  163 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~  163 (451)
                      +.+.+|.|+  .||.++.+.+++         .||||++..... .......+..|+.+++.++|+||+++++++...+.
T Consensus         6 i~~~~~~~~--~v~~~~~~~~~~---------~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~   73 (314)
T cd08216           6 IGKCFEDLM--IVHLAKHKPTNT---------LVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE   73 (314)
T ss_pred             hhHhhcCCc--eEEEEEecCCCC---------EEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe
Confidence            344444444  455555444443         499999976522 23455678889999999999999999999999999


Q ss_pred             EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCC
Q 013016          164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA  243 (451)
Q Consensus       164 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  243 (451)
                      .+++|||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||.+.....
T Consensus        74 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~  153 (314)
T cd08216          74 LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK  153 (314)
T ss_pred             EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecc
Confidence            99999999999999999876556799999999999999999999999999999999999999999999999998743211


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC--
Q 013016          244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG--  321 (451)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--  321 (451)
                      .....                                                ...........++..|+|||++.+.  
T Consensus       154 ~~~~~------------------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (314)
T cd08216         154 HGKRQ------------------------------------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQ  185 (314)
T ss_pred             ccccc------------------------------------------------cccccccccccccccccCHHHhcCCCC
Confidence            10000                                                0000111233677889999998763  


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-------CCC----------------------CCCC
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-------PTQ----------------------SPSS  372 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-------~~~----------------------~~~~  372 (451)
                      .++.++|||||||++|+|++|+.||..............+....       +..                      ....
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTR  265 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhh
Confidence            47899999999999999999999998765544433322211100       000                      0001


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      ..+.++.+|+.+||++||++|||    ++++|+||||+++.
T Consensus       266 ~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~~  302 (314)
T cd08216         266 TFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQCK  302 (314)
T ss_pred             HHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhhc
Confidence            11236889999999999999999    99999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.8e-40  Score=327.51  Aligned_cols=262  Identities=19%  Similarity=0.294  Sum_probs=200.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|++.+.||.|+||+||+|.+.+...    ...+..||||+++...  .......+..|+.++.++ +|+||++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   79 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDK----TATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA   79 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCc----cccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence            3689999999999999999998754321    1223369999997542  123345677799999999 68999999998


Q ss_pred             EEeC-CeEEEEEeeccCCchhhhhhhCC----------------------------------------------------
Q 013016          158 FEAS-NFSCIVMEFCSGGDLHSLRHKQP----------------------------------------------------  184 (451)
Q Consensus       158 ~~~~-~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------  184 (451)
                      +... ..+++|||||++|+|.+++....                                                    
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (343)
T cd05103          80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS  159 (343)
T ss_pred             eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence            8654 57899999999999999886432                                                    


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCC
Q 013016          185 -------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA  251 (451)
Q Consensus       185 -------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  251 (451)
                                   ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......      
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~------  233 (343)
T cd05103         160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------  233 (343)
T ss_pred             cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCc------
Confidence                         1236788889999999999999999999999999999999999999999999974321000      


Q ss_pred             CCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHH
Q 013016          252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA  331 (451)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS  331 (451)
                                                                     .........++..|+|||.+.+..++.++||||
T Consensus       234 -----------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  266 (343)
T cd05103         234 -----------------------------------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS  266 (343)
T ss_pred             -----------------------------------------------chhhcCCCCCCcceECcHHhcCCCCCchhhHHH
Confidence                                                           000011124567799999999888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          332 FGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       332 lG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |||++|+|++ |..||........+..........+.   +...+.++.+++.+||..||++||+    +.||++|
T Consensus       267 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~  335 (343)
T cd05103         267 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  335 (343)
T ss_pred             HHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC---CCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            9999999997 99999875544333333322211111   1123348999999999999999999    9999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=4.4e-40  Score=310.24  Aligned_cols=254  Identities=26%  Similarity=0.387  Sum_probs=212.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|++.++||.|+||.||+|.++.+++         .+|+|.+...... ......+..|+.+++.++|+||+++++++..
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQ---------FYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLD   70 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCC---------EEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhcc
Confidence            58999999999999999998876654         4999998765432 2334566779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ....|+||||+++++|.+++....  ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~  150 (256)
T cd08530          71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGIS  150 (256)
T ss_pred             CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccch
Confidence            999999999999999999886632  345899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                         ......|+..|+|||.+
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~~~~~~~~Pe~~  173 (256)
T cd08530         151 KVLKKN---------------------------------------------------------MAKTQIGTPHYMAPEVW  173 (256)
T ss_pred             hhhccC---------------------------------------------------------CcccccCCccccCHHHH
Confidence            432210                                                         00012577889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|+||||+++|+|++|+.||...+..+....+.........    ...+.++.+++.+||+.+|++||+   
T Consensus       174 ~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~---  246 (256)
T cd08530         174 KGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP----PIYSQDLQNFIRSMLQVKPKLRPN---  246 (256)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc----hhhCHHHHHHHHHHcCCCcccCCC---
Confidence            9988999999999999999999999999988777666666554432211    123448999999999999999999   


Q ss_pred             ChHHHHcCCCc
Q 013016          399 GAADVKTHPFF  409 (451)
Q Consensus       399 ~~~ell~hp~~  409 (451)
                       +.++++||++
T Consensus       247 -~~~~l~~p~~  256 (256)
T cd08530         247 -CDKILASPAV  256 (256)
T ss_pred             -HHHHhcCCCC
Confidence             9999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-40  Score=326.72  Aligned_cols=259  Identities=27%  Similarity=0.393  Sum_probs=202.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+..+++         .||||++.+... .......+..|+.+++.++|+||+++++++.
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~   84 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGE---------KVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFT   84 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCc---------EEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheec
Confidence            679999999999999999999876654         399999875421 2223345667999999999999999999987


Q ss_pred             eCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ...      .+|+|+||+. .+|..++.    ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~  159 (342)
T cd07879          85 SAVSGDEFQDFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKIL  159 (342)
T ss_pred             ccccCCCCceEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence            543      5699999994 56766542    348999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......|+..|+
T Consensus       160 dfg~~~~~~~----------------------------------------------------------~~~~~~~~~~y~  181 (342)
T cd07879         160 DFGLARHADA----------------------------------------------------------EMTGYVVTRWYR  181 (342)
T ss_pred             eCCCCcCCCC----------------------------------------------------------CCCCceeeeccc
Confidence            9999742110                                                          001235788899


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-----------------------CCCCCC
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-----------------------TFPTQS  369 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----------------------~~~~~~  369 (451)
                      |||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+.....                       ..+...
T Consensus       182 aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (342)
T cd07879         182 APEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKD  261 (342)
T ss_pred             ChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccch
Confidence            9999876 4578999999999999999999999988765554444433110                       000000


Q ss_pred             C---CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 P---SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ~---~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      .   ....+.++.+||.+||+.||.+||+    +.+++.||||+++...
T Consensus       262 ~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~l~h~~f~~~~~~  306 (342)
T cd07879         262 FSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEALEHPYFDSFRDA  306 (342)
T ss_pred             HHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcchhhcccc
Confidence            0   0112347899999999999999999    9999999999996543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3e-40  Score=314.66  Aligned_cols=256  Identities=19%  Similarity=0.257  Sum_probs=199.4

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.++||+|+||.||+|.+......       ..+|+|.+..... .......+..|+.+++.++|+||+++++.+...
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~-------~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   72 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSI-------LKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQT   72 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCe-------eeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccC
Confidence            34678899999999999998765421       1389998865421 233456677799999999999999999987432


Q ss_pred             ------CeEEEEEeeccCCchhhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          162 ------NFSCIVMEFCSGGDLHSLRHKQ----PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       162 ------~~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                            ...++||||+++|+|.+++...    ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++
T Consensus        73 ~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k  152 (272)
T cd05075          73 VESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVC  152 (272)
T ss_pred             CcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEE
Confidence                  3579999999999999877432    234589999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++........                                                     ........+++.
T Consensus       153 l~Dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  179 (272)
T cd05075         153 VADFGLSKKIYNGDY-----------------------------------------------------YRQGRIAKMPVK  179 (272)
T ss_pred             ECCCCcccccCcccc-----------------------------------------------------eecCCcccCCcc
Confidence            999999853211000                                                     000011245677


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||.+.+..++.++|||||||++|+|++ |+.||......+....+..+.....   . ...+..+.+++.+||+.||
T Consensus       180 ~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~~l~~~p  255 (272)
T cd05075         180 WIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ---P-PDCLDGLYSLMSSCWLLNP  255 (272)
T ss_pred             cCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC---C-CCCCHHHHHHHHHHcCCCc
Confidence            999999999889999999999999999999 8999988777776666665533211   1 1233479999999999999


Q ss_pred             CCcCCCCCChHHHHcC
Q 013016          391 CNRLGSKRGAADVKTH  406 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~h  406 (451)
                      ++||+    +.+|+++
T Consensus       256 ~~Rps----~~~l~~~  267 (272)
T cd05075         256 KDRPS----FETLRCE  267 (272)
T ss_pred             ccCcC----HHHHHHH
Confidence            99999    9998753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.8e-40  Score=319.33  Aligned_cols=256  Identities=26%  Similarity=0.357  Sum_probs=208.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|...++||+|+||+||+|.+..+++         .||+|++.............+..|+.+++.++|+||+++++++.+
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~---------~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   92 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNE---------VVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK   92 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCc---------EEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            37778889999999999999876654         499999875433333445567779999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ....|+||||+ .++|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        93 ~~~~~lv~e~~-~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633          93 EHTAWLVMEYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             CCEEEEEEecC-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence            99999999999 467777765542 4589999999999999999999999999999999999999999999999998631


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc-
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS-  319 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-  319 (451)
                      ..                                                           ......|+..|+|||++. 
T Consensus       171 ~~-----------------------------------------------------------~~~~~~~~~~y~aPE~~~~  191 (313)
T cd06633         171 SS-----------------------------------------------------------PANSFVGTPYWMAPEVILA  191 (313)
T ss_pred             cC-----------------------------------------------------------CCCCccccccccChhhccc
Confidence            10                                                           001236888899999984 


Q ss_pred             --CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          320 --GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       320 --~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                        +..++.++|||||||++|+|++|..||...........+......  ... ....+..+++|+.+||+.+|.+||+  
T Consensus       192 ~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~li~~~l~~~P~~Rp~--  266 (313)
T cd06633         192 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLQ-SNEWTDSFRGFVDYCLQKIPQERPA--  266 (313)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCC-ccccCHHHHHHHHHHccCChhhCcC--
Confidence              355788999999999999999999999887666655555443221  111 1223347999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCC
Q 013016          398 RGAADVKTHPFFKGLN  413 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~  413 (451)
                        +.+++.||||+..+
T Consensus       267 --~~~~l~~~~~~~~~  280 (313)
T cd06633         267 --SAELLRHDFVRRDR  280 (313)
T ss_pred             --HHHHhcCcccCCCc
Confidence              99999999999844

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-40  Score=316.77  Aligned_cols=258  Identities=28%  Similarity=0.409  Sum_probs=204.9

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.++||.|++|.||+|.+...++         .+|+|++.... ........+..|+.+++.++|+||+++++++...
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~---------~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   70 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGE---------LVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK   70 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCe---------EEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecC
Confidence            6789999999999999999887654         39999998653 2233345667799999999999999999999988


Q ss_pred             --CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          162 --NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       162 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                        +..++||||++ ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~  148 (287)
T cd07840          71 GKGSIYMVFEYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLAR  148 (287)
T ss_pred             CCCcEEEEecccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEcccccee
Confidence              89999999995 58888876542 469999999999999999999999999999999999999999999999999975


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                      .......++..|+|||.+.
T Consensus       149 ~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~PE~~~  174 (287)
T cd07840         149 PYTKRNS------------------------------------------------------ADYTNRVITLWYRPPELLL  174 (287)
T ss_pred             eccCCCc------------------------------------------------------ccccccccccccCCceeeE
Confidence            3221100                                                      0000124677899999877


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC--------------------------CC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP--------------------------SS  372 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------------------------~~  372 (451)
                      +. .++.++||||||+++|+|++|+.||........+..+...........+                          ..
T Consensus       175 ~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T cd07840         175 GATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKH  254 (287)
T ss_pred             ccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcc
Confidence            63 5789999999999999999999999887766555554432111110000                          01


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+..+.+++.+||+.||.+||+    +.+++.||||
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~  287 (287)
T cd07840         255 LIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF  287 (287)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence            12447899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.3e-40  Score=325.13  Aligned_cols=256  Identities=25%  Similarity=0.373  Sum_probs=202.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||+|++.+... .......+.+|+.++++++|+||+++++++.
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGL---------RVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCe---------EEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            789999999999999999999876654         499999875422 2223455667999999999999999999886


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..      ...|++++++ |++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus        87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~  162 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL  162 (345)
T ss_pred             ecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEe
Confidence            43      3578999988 8899887764   348999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......|+..|+
T Consensus       163 dfg~~~~~~~----------------------------------------------------------~~~~~~~~~~y~  184 (345)
T cd07877         163 DFGLARHTDD----------------------------------------------------------EMTGYVATRWYR  184 (345)
T ss_pred             cccccccccc----------------------------------------------------------cccccccCCCcc
Confidence            9999742110                                                          001236788899


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-----------------------CCCCC
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-----------------------FPTQS  369 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----------------------~~~~~  369 (451)
                      |||.+.+ ..++.++|||||||++|+|++|+.||........+..+......                       .+...
T Consensus       185 aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (345)
T cd07877         185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN  264 (345)
T ss_pred             CHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcc
Confidence            9999876 46788999999999999999999999876655544433321110                       00000


Q ss_pred             ---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          370 ---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       370 ---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                         .....+.++.+||.+||+.||.+||+    +.+++.||||++
T Consensus       265 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~f~~  305 (345)
T cd07877         265 FANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHAYFAQ  305 (345)
T ss_pred             hhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHHHhcChhhhh
Confidence               00112347899999999999999999    999999999998

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=4.2e-40  Score=313.15  Aligned_cols=258  Identities=23%  Similarity=0.308  Sum_probs=205.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+|++.+.||.|+||.||+|.++..+.      .+..+|+|.+.....  ......+..|+.++++++||||+++++++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~------~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGK------REIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVV   74 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCC------CceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3679999999999999999998764432      112499999875422  23345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++..|+||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~  153 (267)
T cd05066          75 TKSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLS  153 (267)
T ss_pred             ecCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcc
Confidence            99999999999999999999987653 45899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                    ........++..|+|||.+
T Consensus       154 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~~pe~~  181 (267)
T cd05066         154 RVLEDDPEA----------------------------------------------------AYTTRGGKIPIRWTAPEAI  181 (267)
T ss_pred             cccccccce----------------------------------------------------eeecCCCccceeecCHhHh
Confidence            532210000                                                    0000011235679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|++++ |..||......+....+..+.. .+.  . ...+..+.+++.+||+.+|.+||+  
T Consensus       182 ~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~li~~~l~~~p~~Rp~--  255 (267)
T cd05066         182 AYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-LPA--P-MDCPAALHQLMLDCWQKDRNERPK--  255 (267)
T ss_pred             ccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-CCC--C-CCCCHHHHHHHHHHcccCchhCCC--
Confidence            98889999999999999999886 9999988777666666655422 221  1 122348899999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.++++
T Consensus       256 --~~~i~~  261 (267)
T cd05066         256 --FEQIVS  261 (267)
T ss_pred             --HHHHHH
Confidence              888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-40  Score=327.92  Aligned_cols=257  Identities=26%  Similarity=0.395  Sum_probs=206.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|++|.||+|.+..+++         .||+|++..... .......+.+|+.+++++.|+||+++++++.
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~---------~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   84 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGR---------KVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFT   84 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCc---------EEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhh
Confidence            789999999999999999999987655         499999865421 2233455667999999999999999999886


Q ss_pred             eCCe------EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASNF------SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~~------~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..+.      .|+|+||+ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+
T Consensus        85 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~  160 (343)
T cd07851          85 PASSLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL  160 (343)
T ss_pred             ccccccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEc
Confidence            6554      89999999 7899988875   459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......++..|+
T Consensus       161 dfg~~~~~~~----------------------------------------------------------~~~~~~~~~~y~  182 (343)
T cd07851         161 DFGLARHTDD----------------------------------------------------------EMTGYVATRWYR  182 (343)
T ss_pred             cccccccccc----------------------------------------------------------cccCCccccccc
Confidence            9999742210                                                          001235778899


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC--------------------CC---
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT--------------------QS---  369 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~--------------------~~---  369 (451)
                      |||.+.+ ..++.++|||||||++|+|++|+.||........+..+.......+.                    ..   
T Consensus       183 aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (343)
T cd07851         183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKD  262 (343)
T ss_pred             CHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCC
Confidence            9999866 35789999999999999999999999887766655555443211110                    00   


Q ss_pred             ---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          370 ---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       370 ---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                         .....+..+.+||.+||+.||.+|||    +.+|+.||||++.
T Consensus       263 ~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~ell~h~~~~~~  304 (343)
T cd07851         263 FKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAEALAHPYLAEY  304 (343)
T ss_pred             HHHHhccCCHHHHHHHHHhCCCChhhCCC----HHHHhcCCCcccc
Confidence               00012448999999999999999999    9999999999984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-41  Score=332.22  Aligned_cols=261  Identities=24%  Similarity=0.394  Sum_probs=213.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+.-++-.+.++||+|+||.||+|..+......     ...||+|...........+..++..|+++|++++|||||++|
T Consensus       153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~-----~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y  227 (474)
T KOG0194|consen  153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFK-----VVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY  227 (474)
T ss_pred             EEeccCccccceeecccccEEEEEEEEecCCce-----eeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            334455667799999999999999987653210     012899999864445567788899999999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      |+......++||||+|.||+|.+++...+. .++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+||
T Consensus       228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDF  306 (474)
T KOG0194|consen  228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDF  306 (474)
T ss_pred             EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcc
Confidence            999999999999999999999999998754 5999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....-                                          .+.             ...-.-...|+||
T Consensus       307 GLs~~~~~~------------------------------------------~~~-------------~~~~klPirWLAP  331 (474)
T KOG0194|consen  307 GLSRAGSQY------------------------------------------VMK-------------KFLKKLPIRWLAP  331 (474)
T ss_pred             ccccCCcce------------------------------------------eec-------------cccccCcceecCh
Confidence            997422100                                          000             0000123569999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |.+....|+.++|||||||++||+++ |..||.+....+....+.......+...   ..+.++..++.+|+..||+.||
T Consensus       332 Etl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~---~~p~~~~~~~~~c~~~~p~~R~  408 (474)
T KOG0194|consen  332 ETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS---KTPKELAKVMKQCWKKDPEDRP  408 (474)
T ss_pred             hhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC---CCHHHHHHHHHHhccCChhhcc
Confidence            99999999999999999999999999 8999999999999999955433322221   2344889999999999999999


Q ss_pred             CCCCChHHHH
Q 013016          395 GSKRGAADVK  404 (451)
Q Consensus       395 t~~~~~~ell  404 (451)
                      +    +.++.
T Consensus       409 t----m~~i~  414 (474)
T KOG0194|consen  409 T----MSTIK  414 (474)
T ss_pred             C----HHHHH
Confidence            9    66554

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.3e-40  Score=321.53  Aligned_cols=271  Identities=27%  Similarity=0.362  Sum_probs=202.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.++||.|+||.||+|.++.+++.         +|||++...... ........+|+++++.++|+||+++++++
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~---------~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRV---------VALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMA   76 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcE---------EEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhhe
Confidence            37899999999999999999998876653         999998654221 11223455699999999999999999987


Q ss_pred             EeC--------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EAS--------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ...        ..+++||||+ +++|...+... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+
T Consensus        77 ~~~~~~~~~~~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~  154 (311)
T cd07866          77 VERPDKSKRKRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGIL  154 (311)
T ss_pred             ecccccccccCceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            543        3579999999 45677666543 3469999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +|+|||++............                                            .............|++
T Consensus       155 ~l~dfg~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~  190 (311)
T cd07866         155 KIADFGLARPYDGPPPNPKG--------------------------------------------GGGGGTRKYTNLVVTR  190 (311)
T ss_pred             EECcCccchhccCCCccccc--------------------------------------------CCcccccccccceecc
Confidence            99999998533211110000                                            0000011112347888


Q ss_pred             CccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-------------------CCC
Q 013016          311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-------------------QSP  370 (451)
Q Consensus       311 ~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------------------~~~  370 (451)
                      .|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+.......+.........                   ...
T Consensus       191 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (311)
T cd07866         191 WYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP  270 (311)
T ss_pred             CcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCC
Confidence            99999988764 4789999999999999999999999887766555544332111000                   000


Q ss_pred             C------CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          371 S------SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       371 ~------~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .      ......+.+||.+||+.||.+|||    +.|++.||||
T Consensus       271 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ell~~~~f  311 (311)
T cd07866         271 RTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----ASDALEHPYF  311 (311)
T ss_pred             ccHHHHcccCChhHHHHHHHHcccCcccCcC----HHHHhcCCCC
Confidence            0      011237889999999999999999    9999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=3.2e-40  Score=317.54  Aligned_cols=259  Identities=20%  Similarity=0.299  Sum_probs=204.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+.....    ......||+|++.....  ......+..|+.+++++.|+||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~   78 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLP----YEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCA   78 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCC----CCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEc
Confidence            689999999999999999998754210    01123599999875422  233456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP--------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      .++..|+||||+++++|.+++....                    ...+++..++.++.||+.||+|||++|++||||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            9999999999999999999987432                    12478889999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +||+++.++.++|+|||++........                                                     
T Consensus       159 ~nil~~~~~~~~l~dfg~~~~~~~~~~-----------------------------------------------------  185 (288)
T cd05050         159 RNCLVGENMVVKIADFGLSRNIYSADY-----------------------------------------------------  185 (288)
T ss_pred             hheEecCCCceEECccccceecccCcc-----------------------------------------------------
Confidence            999999999999999998742210000                                                     


Q ss_pred             cccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHH
Q 013016          300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                      ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+....+..+.....    +...+.++
T Consensus       186 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l  261 (288)
T cd05050         186 YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSC----PDNCPLEL  261 (288)
T ss_pred             ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCCHHH
Confidence            000001134567999999998889999999999999999997 8899988777777776665543211    11233489


Q ss_pred             HHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          379 RDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+|+.+||+.||.+||+    +.||++
T Consensus       262 ~~li~~~l~~~p~~Rpt----~~el~~  284 (288)
T cd05050         262 YNLMRLCWSKLPSDRPS----FASINR  284 (288)
T ss_pred             HHHHHHHcccCcccCCC----HHHHHH
Confidence            99999999999999999    888764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-40  Score=307.33  Aligned_cols=254  Identities=27%  Similarity=0.429  Sum_probs=211.1

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +|.+.+.||.|++|.||+|.++..++         .||+|.+...... ......+..|++++++++|+||+++++++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   70 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGD---------FVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIET   70 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCc---------EEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEe
Confidence            48899999999999999999876655         3999999766432 2345678889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..++||||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++..
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  148 (254)
T cd06627          71 SDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATK  148 (254)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEecccccee
Confidence            99999999999999999998765  5699999999999999999999999999999999999999999999999999853


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ......                                                       ......|+..|+|||...+
T Consensus       149 ~~~~~~-------------------------------------------------------~~~~~~~~~~y~~pe~~~~  173 (254)
T cd06627         149 LNDVSK-------------------------------------------------------DDASVVGTPYWMAPEVIEM  173 (254)
T ss_pred             cCCCcc-------------------------------------------------------cccccccchhhcCHhhhcC
Confidence            221000                                                       0112357888999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      ..++.++||||||+++|+|++|..||...........+.......   . +...+..+.+++.+||..+|++||+    +
T Consensus       174 ~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~i~~~l~~~p~~R~~----~  245 (254)
T cd06627         174 SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPP---L-PEGISPELKDFLMQCFQKDPNLRPT----A  245 (254)
T ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCC---C-CCCCCHHHHHHHHHHHhCChhhCcC----H
Confidence            778999999999999999999999998766555554544322211   1 1122348999999999999999999    9


Q ss_pred             HHHHcCCCc
Q 013016          401 ADVKTHPFF  409 (451)
Q Consensus       401 ~ell~hp~~  409 (451)
                      .+++.||||
T Consensus       246 ~~~l~~~~~  254 (254)
T cd06627         246 KQLLKHPWI  254 (254)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=5.9e-40  Score=313.29  Aligned_cols=260  Identities=18%  Similarity=0.280  Sum_probs=210.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++...||.|+||.||+|+.+...+.    .....||+|.+....  .......+..|+.++++++|+||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~----~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   78 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEE----GGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCR   78 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcC----CCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEEC
Confidence            6799999999999999999998654321    122359999986542  2224566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPH-------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      +.+..|+||||+++++|.+++.....       ..+++..++.++.||+.||+|||++||+||||||+||+++.++.++|
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l  158 (275)
T cd05046          79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV  158 (275)
T ss_pred             CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence            99999999999999999999876542       25899999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++.......                                                      ........++..|
T Consensus       159 ~~~~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y  184 (275)
T cd05046         159 SLLSLSKDVYNSE------------------------------------------------------YYKLRNALIPLRW  184 (275)
T ss_pred             cccccccccCccc------------------------------------------------------ccccCCceeEEee
Confidence            9999874211000                                                      0001122456779


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +|||.+.+..++.++||||||+++|+|++ |..||...........+..+....+..   ...+..+.+++.+||+.||.
T Consensus       185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~  261 (275)
T cd05046         185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVP---EGCPSRLYKLMTRCWAVNPK  261 (275)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCC---CCCCHHHHHHHHHHcCCCcc
Confidence            99999988888999999999999999998 899998877777777666555443321   22344899999999999999


Q ss_pred             CcCCCCCChHHHHcC
Q 013016          392 NRLGSKRGAADVKTH  406 (451)
Q Consensus       392 ~Rpt~~~~~~ell~h  406 (451)
                      +||+    +.+++.+
T Consensus       262 ~Rp~----~~~~l~~  272 (275)
T cd05046         262 DRPS----FSELVSA  272 (275)
T ss_pred             cCCC----HHHHHHH
Confidence            9999    9998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.2e-40  Score=313.60  Aligned_cols=256  Identities=27%  Similarity=0.452  Sum_probs=204.4

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +|.+.++||+|+||.||+|.+......         +++|++......  .......+..|+.++++++||||+++++++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAE---------ERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF   71 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCc---------ceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence            488999999999999999988755432         566665432211  112233455688999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ......++||||+++++|.+++...  ....+++..++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||
T Consensus        72 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g  150 (260)
T cd08222          72 LERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFG  150 (260)
T ss_pred             hcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccC
Confidence            9999999999999999999888642  3456999999999999999999999999999999999999974 679999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.......                                                       .......|+..|+|||
T Consensus       151 ~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~~pe  175 (260)
T cd08222         151 VSRLLMGSC-------------------------------------------------------DLATTFTGTPYYMSPE  175 (260)
T ss_pred             ceeecCCCc-------------------------------------------------------ccccCCCCCcCccCHH
Confidence            874321100                                                       0011235788899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .+.+..++.++|+||||+++|+|++|..||...........+..+.....    +...+.++.++|.+||..||++||+ 
T Consensus       176 ~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~-  250 (260)
T cd08222         176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL----PETYSRQLNSIMQSMLNKDPSLRPS-  250 (260)
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC----cchhcHHHHHHHHHHhcCChhhCcC-
Confidence            99888889999999999999999999999987766666666655432221    1233448999999999999999999 


Q ss_pred             CCChHHHHcCCCc
Q 013016          397 KRGAADVKTHPFF  409 (451)
Q Consensus       397 ~~~~~ell~hp~~  409 (451)
                         +.|+++||||
T Consensus       251 ---~~~il~~~~~  260 (260)
T cd08222         251 ---AAEILRNPFI  260 (260)
T ss_pred             ---HHHHhhCCCC
Confidence               9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=6.9e-40  Score=309.60  Aligned_cols=252  Identities=22%  Similarity=0.309  Sum_probs=203.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      ++||+|++|.||+|.+.....      ....||||.+......  .....+..|+.++++++|+||+++++.+.. ...+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~   71 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGG------KVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLM   71 (257)
T ss_pred             CcCCccCcccEEeeeEecCCC------CceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEE
Confidence            368999999999999865321      1123899999876543  456677889999999999999999999988 8999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+++++|.+++.......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus        72 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~  151 (257)
T cd05040          72 MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE  151 (257)
T ss_pred             EEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccc
Confidence            99999999999999887643568999999999999999999999999999999999999999999999999985322100


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                      .                                                    .........++..|+|||.+.+..++.
T Consensus       152 ~----------------------------------------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~  179 (257)
T cd05040         152 D----------------------------------------------------HYVMEEHLKVPFAWCAPESLRTRTFSH  179 (257)
T ss_pred             c----------------------------------------------------ceecccCCCCCceecCHHHhcccCcCc
Confidence            0                                                    000001235677899999999888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      ++|||||||++|+|++ |+.||......+....+.......+.   +...+..+.+++.+||+.+|++||+    +.+++
T Consensus       180 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~  252 (257)
T cd05040         180 ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER---PEACPQDIYNVMLQCWAHNPADRPT----FAALR  252 (257)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC---CccCCHHHHHHHHHHCCCCcccCCC----HHHHH
Confidence            9999999999999998 99999887777766666543222221   1223448999999999999999999    88887


Q ss_pred             c
Q 013016          405 T  405 (451)
Q Consensus       405 ~  405 (451)
                      .
T Consensus       253 ~  253 (257)
T cd05040         253 E  253 (257)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5.7e-40  Score=312.50  Aligned_cols=253  Identities=19%  Similarity=0.259  Sum_probs=193.6

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      ++||+|+||.||+|.......       ...+|+|.+....  .......+.+|+.+++.++|+||+++++.+...+..|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~-------~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~   71 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMS-------KARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYL   71 (269)
T ss_pred             CcCCccCCceEEEEEEecCCC-------CeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceE
Confidence            369999999999997644321       1248888876432  2233455677999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccC
Q 013016          166 IVMEFCSGGDLHSLRHKQPH---KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN  242 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  242 (451)
                      +||||+++|+|.+++.....   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  151 (269)
T cd05042          72 LVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQY  151 (269)
T ss_pred             EEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccc
Confidence            99999999999999876532   235688889999999999999999999999999999999999999999999873211


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC--
Q 013016          243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG--  320 (451)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--  320 (451)
                      ..                                                     ..........++..|+|||++..  
T Consensus       152 ~~-----------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~  178 (269)
T cd05042         152 PE-----------------------------------------------------DYYITKDCHAVPLRWLAPELVEIRG  178 (269)
T ss_pred             cc-----------------------------------------------------hheeccCCCCCcccccCHHHHhhcc
Confidence            00                                                     00000011245677999998743  


Q ss_pred             -----CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcC-CCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          321 -----GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       321 -----~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                           ..++.++|||||||++|||++ |..||......+.+..+... ....+....+...+..+.+++..|+ .||++|
T Consensus       179 ~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~R  257 (269)
T cd05042         179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETR  257 (269)
T ss_pred             ccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccc
Confidence                 346889999999999999999 88999887766666655443 3333333333345557888999998 599999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      |+    +++|++
T Consensus       258 pt----~~~v~~  265 (269)
T cd05042         258 PT----AEEVHE  265 (269)
T ss_pred             cC----HHHHHH
Confidence            99    888875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7.6e-40  Score=311.38  Aligned_cols=257  Identities=21%  Similarity=0.277  Sum_probs=205.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|...+.||+|+||.||+|.++...+.      ...+|+|.+....  .......+..|++++++++|+||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~------~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRK------EVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVT   76 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCC------ceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc
Confidence            6799999999999999999998754321      1249999986542  1223456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  155 (268)
T cd05063          77 KFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR  155 (268)
T ss_pred             cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccce
Confidence            9999999999999999999987643 468999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .........                                                    .......++..|+|||++.
T Consensus       156 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~y~~PE~~~  183 (268)
T cd05063         156 VLEDDPEGT----------------------------------------------------YTTSGGKIPIRWTAPEAIA  183 (268)
T ss_pred             ecccccccc----------------------------------------------------eeccCCCcCceecCHHHhh
Confidence            322110000                                                    0000112345799999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++|||||||++|+|++ |..||......+....+.... ..+.   ....+..+.+++.+||..||++||+   
T Consensus       184 ~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~---  256 (268)
T cd05063         184 YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RLPA---PMDCPSAVYQLMLQCWQQDRARRPR---  256 (268)
T ss_pred             cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CCCC---CCCCCHHHHHHHHHHcCCCcccCcC---
Confidence            8889999999999999999997 999998877777776665542 2221   1123348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.+|++
T Consensus       257 -~~~i~~  262 (268)
T cd05063         257 -FVDIVN  262 (268)
T ss_pred             -HHHHHH
Confidence             888874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=8.1e-40  Score=311.46  Aligned_cols=260  Identities=22%  Similarity=0.298  Sum_probs=205.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+|++.+.||.|+||.||+|.++..++.      +..||||++....  .......+..|+.+++.++||||+++++++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~------~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   74 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKR------EIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVV   74 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCC------ceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence            36799999999999999999998765431      1249999987542  233446678899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++..++||||+++++|.+++.... +.+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~  153 (269)
T cd05065          75 TKSRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLS  153 (269)
T ss_pred             CCCCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccc
Confidence            99999999999999999999887653 45899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ...........                                                  ........++..|+|||.+
T Consensus       154 ~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~y~~PE~~  183 (269)
T cd05065         154 RFLEDDTSDPT--------------------------------------------------YTSSLGGKIPIRWTAPEAI  183 (269)
T ss_pred             cccccCccccc--------------------------------------------------cccccCCCcceeecCHhHh
Confidence            43221100000                                                  0000000124569999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |..||......+....+.... ..+.  . ...+..+.+++.+||..+|.+||+  
T Consensus       184 ~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~--~-~~~~~~~~~li~~~l~~~p~~Rp~--  257 (269)
T cd05065         184 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-RLPP--P-MDCPTALHQLMLDCWQKDRNARPK--  257 (269)
T ss_pred             ccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-cCCC--c-ccCCHHHHHHHHHHcCCChhhCcC--
Confidence            98889999999999999999886 999998877776666664432 1111  1 122348899999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +++|+.
T Consensus       258 --~~~i~~  263 (269)
T cd05065         258 --FGQIVS  263 (269)
T ss_pred             --HHHHHH
Confidence              888875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=7.6e-40  Score=316.33  Aligned_cols=265  Identities=22%  Similarity=0.313  Sum_probs=205.8

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      ..+..++|.+.+.||.|++|.||+|.++.+++         .||||++......  .....+..|+.++.+. .|+||++
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~---------~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~   78 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGH---------VMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVK   78 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEECCCCe---------EEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHh
Confidence            34556889999999999999999999886554         4999999754221  2233445566666666 4999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEE
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      +++++......|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.+||
T Consensus        79 ~~~~~~~~~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL  156 (296)
T cd06618          79 CYGYFITDSDVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKL  156 (296)
T ss_pred             hheeeecCCeEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEE
Confidence            999999999999999998 567777766543 468999999999999999999997 69999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++.......                                                        ......|+..|
T Consensus       157 ~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~y  180 (296)
T cd06618         157 CDFGISGRLVDSK--------------------------------------------------------AKTRSAGCAAY  180 (296)
T ss_pred             CccccchhccCCC--------------------------------------------------------cccCCCCCccc
Confidence            9999874221000                                                        00012467789


Q ss_pred             cCcccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          313 VSPEVASGGS----HGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       313 ~aPE~~~~~~----~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +|||.+.+..    ++.++||||||+++|+|++|+.||..... .+.+..+.........  .....+.++.+|+.+||+
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~  258 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLP--PNEGFSPDFCSFVDLCLT  258 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHHHHcc
Confidence            9999987653    78899999999999999999999976433 3455555544322111  111234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .||.+||+    +++++.||||+....
T Consensus       259 ~~p~~Rp~----~~~il~~~~~~~~~~  281 (296)
T cd06618         259 KDHRKRPK----YRELLQHPFIRRYET  281 (296)
T ss_pred             CChhhCCC----HHHHhcChhhhccch
Confidence            99999999    999999999987433

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=6.1e-40  Score=310.30  Aligned_cols=247  Identities=21%  Similarity=0.266  Sum_probs=194.7

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~l  166 (451)
                      +||+|+||.||+|.++....       +..+|+|++..... .....+.+..|+.+++.+.|+||+++++++. .+..++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~-------~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~l   72 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKS-------EKTVAVKILKNDNN-DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWML   72 (257)
T ss_pred             cCCCcCCcceEEeEEecCCC-------ceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEE
Confidence            68999999999997653321       12599999865432 2334566778999999999999999999886 456799


Q ss_pred             EEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCC
Q 013016          167 VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  246 (451)
                      ||||+++++|.+++...  ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus        73 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~  150 (257)
T cd05116          73 VMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN  150 (257)
T ss_pred             EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC
Confidence            99999999999998764  4589999999999999999999999999999999999999999999999999843221100


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA  326 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  326 (451)
                      .                                                    ........++..|+|||.+.+..++.+
T Consensus       151 ~----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~  178 (257)
T cd05116         151 Y----------------------------------------------------YKAKTHGKWPVKWYAPECMNYYKFSSK  178 (257)
T ss_pred             e----------------------------------------------------eeecCCCCCCccccCHhHhccCCcCch
Confidence            0                                                    000001134578999999988888999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          327 VDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       327 ~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      +|||||||++|||++ |+.||......+....+..+.. ..+     ...+.++.+||.+||+.||++||+    +.+|.
T Consensus       179 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~l~~li~~~~~~~p~~Rp~----~~~i~  249 (257)
T cd05116         179 SDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP-----QRCPPEMYDLMKLCWTYGVDERPG----FAVVE  249 (257)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC-----CCCCHHHHHHHHHHhccCchhCcC----HHHHH
Confidence            999999999999998 9999988777666666655432 122     123348999999999999999999    77765


Q ss_pred             c
Q 013016          405 T  405 (451)
Q Consensus       405 ~  405 (451)
                      .
T Consensus       250 ~  250 (257)
T cd05116         250 L  250 (257)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=5.1e-40  Score=317.06  Aligned_cols=257  Identities=26%  Similarity=0.421  Sum_probs=207.4

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |....+||+|+||.||++..+.+++         .||||.+....   ......+..|+.+++.++|+||+++++.+...
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~---------~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   89 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGK---------LVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG   89 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCe---------EEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeC
Confidence            3444679999999999999877655         39999885432   22345577799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ++.|+||||+++++|.+++..   ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~  166 (292)
T cd06657          90 DELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV  166 (292)
T ss_pred             CEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceec
Confidence            999999999999999988754   34899999999999999999999999999999999999999999999999986321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ...                                                       ........|+..|+|||.+.+.
T Consensus       167 ~~~-------------------------------------------------------~~~~~~~~~~~~y~~pE~~~~~  191 (292)
T cd06657         167 SKE-------------------------------------------------------VPRRKSLVGTPYWMAPELISRL  191 (292)
T ss_pred             ccc-------------------------------------------------------cccccccccCccccCHHHhcCC
Confidence            100                                                       0001123678899999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChH
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA  401 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~  401 (451)
                      .++.++||||||+++|+|++|..||...........+....... ...... .+..+.+++.+||..||.+||+    +.
T Consensus       192 ~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~l~~li~~~l~~~P~~R~~----~~  265 (292)
T cd06657         192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK-LKNLHK-VSPSLKGFLDRLLVRDPAQRAT----AA  265 (292)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-cCCccc-CCHHHHHHHHHHHhCCcccCcC----HH
Confidence            88999999999999999999999998776665555443332211 111112 2348899999999999999999    99


Q ss_pred             HHHcCCCcCCCCc
Q 013016          402 DVKTHPFFKGLNF  414 (451)
Q Consensus       402 ell~hp~~~~~~~  414 (451)
                      +++.||||.....
T Consensus       266 ~ll~~~~~~~~~~  278 (292)
T cd06657         266 ELLKHPFLAKAGP  278 (292)
T ss_pred             HHhcChHHhccCC
Confidence            9999999999543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.7e-40  Score=308.79  Aligned_cols=249  Identities=19%  Similarity=0.275  Sum_probs=196.5

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      ++||+|+||.||+|.+.....      ....+|+|.+......  .....+..|+.+++.+.|+||+++++++. .+..+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~------~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   71 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSG------KEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLM   71 (257)
T ss_pred             CccCccCceeEEEeEeeccCC------CcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceE
Confidence            469999999999998755431      1124999999866433  33456777999999999999999999876 45689


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+++++|.+++....  .+++..+..++.|++.||+|||.+|++|+||||+|||++.++.+||+|||++.......
T Consensus        72 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~  149 (257)
T cd05060          72 LVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS  149 (257)
T ss_pred             EEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCC
Confidence            9999999999999998753  68999999999999999999999999999999999999999999999999974321100


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                      .                                                    .........++..|+|||.+.+..++.
T Consensus       150 ~----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~  177 (257)
T cd05060         150 D----------------------------------------------------YYRATTAGRWPLKWYAPECINYGKFSS  177 (257)
T ss_pred             c----------------------------------------------------ccccccCccccccccCHHHhcCCCCCc
Confidence            0                                                    000000112456799999999888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      ++|||||||++|+|++ |..||......+....+...... +   .+...+..+.+++.+||..||.+||+    +.+|+
T Consensus       178 ~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~li~~cl~~~p~~Rp~----~~~l~  249 (257)
T cd05060         178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL-P---RPEECPQEIYSIMLSCWKYRPEDRPT----FSELE  249 (257)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC-C---CCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence            9999999999999998 99999887776666665544321 1   11223348999999999999999999    88876


Q ss_pred             c
Q 013016          405 T  405 (451)
Q Consensus       405 ~  405 (451)
                      +
T Consensus       250 ~  250 (257)
T cd05060         250 S  250 (257)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=7.9e-40  Score=319.43  Aligned_cols=255  Identities=25%  Similarity=0.359  Sum_probs=208.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|...+.||+|+||.||+|.+..++.         .||+|++.............+..|++++++++|+|++++++++.
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~---------~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   95 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNE---------VVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL   95 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCc---------EEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            348889999999999999999876554         49999987543333344566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..++||||+. |+|.+++... ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.
T Consensus        96 ~~~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~  173 (317)
T cd06635          96 REHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSAS  173 (317)
T ss_pred             eCCeEEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCcc
Confidence            9999999999995 5787776544 3458999999999999999999999999999999999999999999999999873


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                           .....|+..|+|||++.
T Consensus       174 ~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~~  194 (317)
T cd06635         174 IASP-----------------------------------------------------------ANSFVGTPYWMAPEVIL  194 (317)
T ss_pred             ccCC-----------------------------------------------------------cccccCCccccChhhhh
Confidence            2110                                                           01235788899999974


Q ss_pred             ---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 ---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                         +..++.++|||||||++|+|++|+.||...........+.........   ....+..+.+|+.+||+.+|.+||+ 
T Consensus       195 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt-  270 (317)
T cd06635         195 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQDRPT-  270 (317)
T ss_pred             cCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC---CccccHHHHHHHHHHccCCcccCcC-
Confidence               356789999999999999999999999887666666666554332111   1223347999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.++++|+|+..
T Consensus       271 ---~~~il~~~~~~~  282 (317)
T cd06635         271 ---SEELLKHMFVLR  282 (317)
T ss_pred             ---HHHHHhChhhhc
Confidence               999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=4.1e-40  Score=318.75  Aligned_cols=261  Identities=27%  Similarity=0.332  Sum_probs=203.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.++.+++         .||+|++..... .......+..|+.++++++||||+++++++
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~   75 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGE---------LVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIV   75 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCc---------EEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeehee
Confidence            3789999999999999999999986654         499999975421 122234556799999999999999999998


Q ss_pred             EeCC----------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          159 EASN----------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       159 ~~~~----------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      .+..          ++|+|+||+++ +|.+++... ...+++..++.++.||+.||+|||++||+|+||||+||+++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~  153 (302)
T cd07864          76 TDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG  153 (302)
T ss_pred             cCcchhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            7654          89999999965 777766654 34689999999999999999999999999999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++........                                                      .......+
T Consensus       154 ~~kl~dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~  179 (302)
T cd07864         154 QIKLADFGLARLYNSEES------------------------------------------------------RPYTNKVI  179 (302)
T ss_pred             cEEeCcccccccccCCcc------------------------------------------------------ccccccee
Confidence            999999999743221100                                                      00001245


Q ss_pred             CCCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC-------------------
Q 013016          309 THEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-------------------  368 (451)
Q Consensus       309 t~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-------------------  368 (451)
                      +..|+|||.+.+. .++.++|||||||++|+|++|+.||......+.+..+..........                   
T Consensus       180 ~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T cd07864         180 TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ  259 (302)
T ss_pred             ccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccc
Confidence            6789999988654 46889999999999999999999998876666555544321110000                   


Q ss_pred             ------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          369 ------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       369 ------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                            ......+..+.++|.+||..||.+||+    +.+++.||||
T Consensus       260 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~  302 (302)
T cd07864         260 YRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT----AEEALNSPWL  302 (302)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCC
Confidence                  001113458999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.2e-39  Score=315.01  Aligned_cols=264  Identities=22%  Similarity=0.350  Sum_probs=201.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEecccccc-------CCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQ-------DRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~-------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv  152 (451)
                      ++|++.++||+|+||.||+|.+....+.       ....+....+|+|++....  .......+..|+.+++.++|+||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence            5799999999999999999976542210       0111223469999997542  223345677899999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH---------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      ++++++...+..|+||||+++++|.+++.....         ..+++..+..++.||+.||+|||++|++|+||||+|||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil  162 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL  162 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence            999999999999999999999999998876421         24778899999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.++|+|||++.......                                                     .....
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~-----------------------------------------------------~~~~~  189 (296)
T cd05095         163 VGKNYTIKIADFGMSRNLYSGD-----------------------------------------------------YYRIQ  189 (296)
T ss_pred             EcCCCCEEeccCcccccccCCc-----------------------------------------------------ceecc
Confidence            9999999999999974321000                                                     00001


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhc---C---CCCCCCCCCCCcCh
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY--GRTPFAAPSNETTLRNIVK---K---PLTFPTQSPSSMSE  375 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~---~---~~~~~~~~~~~~~~  375 (451)
                      ....++..|+|||...++.++.++|||||||++|||++  |..||......+.+.....   .   ....+.   +...+
T Consensus       190 ~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  266 (296)
T cd05095         190 GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPK---PALCP  266 (296)
T ss_pred             CcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCC---CCCCC
Confidence            11244677999999888889999999999999999998  7889987665554443221   1   111111   12233


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ..+.+|+.+||+.||.+||+    +.+|++
T Consensus       267 ~~~~~li~~cl~~~p~~Rp~----~~~i~~  292 (296)
T cd05095         267 DSLYKLMLSCWRRNAKERPS----FQEIHA  292 (296)
T ss_pred             HHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence            48999999999999999999    888764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5.3e-40  Score=322.73  Aligned_cols=264  Identities=25%  Similarity=0.361  Sum_probs=201.8

Q ss_pred             CceEEeeeccCCeeEEEEEEeccc--cccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNK--YRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      +|.+.+.||.|+||.||+|.+...  +.         .||+|++.... ........+..|+.+++++ +|+||+++++.
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~---------~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   70 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEE---------TVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDM   70 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCc---------eEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeee
Confidence            488999999999999999998765  33         49999986432 1222344566799999998 59999999987


Q ss_pred             EEeC----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          158 FEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       158 ~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +...    ...|+++||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus        71 ~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~  147 (332)
T cd07857          71 DIVFPGNFNELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKIC  147 (332)
T ss_pred             eeeccccCCcEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeC
Confidence            5432    4688999998 57898888654  558999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.........                                                   .........|+..|+
T Consensus       148 Dfg~a~~~~~~~~~---------------------------------------------------~~~~~~~~~g~~~y~  176 (332)
T cd07857         148 DFGLARGFSENPGE---------------------------------------------------NAGFMTEYVATRWYR  176 (332)
T ss_pred             cCCCceeccccccc---------------------------------------------------ccccccCcccCcccc
Confidence            99998532210000                                                   000111347899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--------------------------C
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF--------------------------P  366 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~--------------------------~  366 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||...+....+..++......                          +
T Consensus       177 aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (332)
T cd07857         177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKP  256 (332)
T ss_pred             CcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcc
Confidence            9998866 468999999999999999999999998765444433332211100                          0


Q ss_pred             -CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          367 -TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       367 -~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                       ....+. .+..+.+|+.+||+.||.+|||    +.+++.||||++..
T Consensus       257 ~~~~~~~-~~~~~~~li~~~l~~~P~~R~t----~~~ll~~~~~~~~~  299 (332)
T cd07857         257 FESIFPN-ANPLALDLLEKLLAFDPTKRIS----VEEALEHPYLAIWH  299 (332)
T ss_pred             hHhhCCC-CCHHHHHHHHHHccCCcccCCC----HHHHhcChhhhhhc
Confidence             001111 2347999999999999999999    99999999998743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-40  Score=314.55  Aligned_cols=256  Identities=29%  Similarity=0.409  Sum_probs=202.6

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~  160 (451)
                      |.+.+.||.|++|+||+|.+..+++         .||||.+......  .......+|+..++++. |+||+++++++..
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~---------~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   69 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGE---------LVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRE   69 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCc---------EEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhc
Confidence            6788999999999999999877655         3999998754321  11223345888999998 9999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ++..|+||||+ +++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~  148 (283)
T cd07830          70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLARE  148 (283)
T ss_pred             CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeeccccee
Confidence            99999999999 88999988776555789999999999999999999999999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      .....                                                        ......|+..|+|||++.+
T Consensus       149 ~~~~~--------------------------------------------------------~~~~~~~~~~~~aPE~~~~  172 (283)
T cd07830         149 IRSRP--------------------------------------------------------PYTDYVSTRWYRAPEILLR  172 (283)
T ss_pred             ccCCC--------------------------------------------------------CcCCCCCcccccCceeeec
Confidence            21100                                                        0011357888999998854


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-------------------CCC------CCcC
Q 013016          321 -GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-------------------QSP------SSMS  374 (451)
Q Consensus       321 -~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------------------~~~------~~~~  374 (451)
                       ..++.++||||||+++|+|++|+.||......+.+..+.........                   ...      ....
T Consensus       173 ~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (283)
T cd07830         173 STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNA  252 (283)
T ss_pred             CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccC
Confidence             45789999999999999999999999877665554443321111000                   000      0011


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      +.++.+||++||+.||++|||    +.|++.||||
T Consensus       253 ~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~  283 (283)
T cd07830         253 SPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF  283 (283)
T ss_pred             CHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence            347999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=4.2e-40  Score=324.82  Aligned_cols=261  Identities=25%  Similarity=0.360  Sum_probs=201.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.+..+++         .||+|.+.....   .....+..|++++++++|+||+++++++.
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~---------~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~   72 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDK---------RVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLG   72 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCc---------EEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhc
Confidence            689999999999999999999887665         499999865422   33455667999999999999999998765


Q ss_pred             eC--------------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          160 AS--------------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       160 ~~--------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      ..              ...|+||||+. ++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~  148 (342)
T cd07854          73 PSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN  148 (342)
T ss_pred             ccccccccccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc
Confidence            44              36899999995 688887754   3589999999999999999999999999999999999998


Q ss_pred             c-CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          226 S-DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       226 ~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      . ++.++|+|||.+.........                                                    .....
T Consensus       149 ~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------------~~~~~  176 (342)
T cd07854         149 TEDLVLKIGDFGLARIVDPHYSH----------------------------------------------------KGYLS  176 (342)
T ss_pred             CCCceEEECCcccceecCCcccc----------------------------------------------------ccccc
Confidence            4 567899999997432110000                                                    00001


Q ss_pred             ccccCCCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC------------------
Q 013016          305 SFVGTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF------------------  365 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~------------------  365 (451)
                      ...|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||......+....+.......                  
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (342)
T cd07854         177 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRN  256 (342)
T ss_pred             cccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh
Confidence            1257888999998755 457889999999999999999999998776655544443321100                  


Q ss_pred             ----CCC---CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          366 ----PTQ---SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       366 ----~~~---~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                          +..   ......+.++.+||.+||+.||.+|||    +.+++.||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ell~h~~~~~~  306 (342)
T cd07854         257 DGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT----AEEALMHPYMSCY  306 (342)
T ss_pred             cccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC----HHHHhCCCccccc
Confidence                000   000113347899999999999999999    9999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-40  Score=315.51  Aligned_cols=257  Identities=29%  Similarity=0.430  Sum_probs=204.1

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.+.||.|++|.||+|.+..+++         .+++|.+...... ......+..|+.++++++|+||+++++++..+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~---------~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   70 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGE---------IVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHK   70 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCc---------EEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccC
Confidence            5678899999999999999876654         4999998754322 23345677799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..++||||++ ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+...
T Consensus        71 ~~~~~v~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~  148 (283)
T cd05118          71 GDLYLVFEFMD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSF  148 (283)
T ss_pred             CCEEEEEeccC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEec
Confidence            99999999995 58887776643 56999999999999999999999999999999999999999999999999987433


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ....                                                       .......++..|+|||.+.+.
T Consensus       149 ~~~~-------------------------------------------------------~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         149 GSPV-------------------------------------------------------RPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             CCCc-------------------------------------------------------ccccCccCcccccCcHHHhcC
Confidence            2110                                                       000012467789999999876


Q ss_pred             -CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-------------------CCCCCC------CCcCh
Q 013016          322 -SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-------------------FPTQSP------SSMSE  375 (451)
Q Consensus       322 -~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------------------~~~~~~------~~~~~  375 (451)
                       .++.++||||||+++|+|++|+.||...+..+.+..+......                   ++....      ....+
T Consensus       174 ~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (283)
T cd05118         174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNAS  253 (283)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhC
Confidence             6899999999999999999999999887766554444322111                   000000      01123


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .++.+||.+||++||.+||+    +.+++.||||
T Consensus       254 ~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~  283 (283)
T cd05118         254 PQALDLLSQMLHYDPHKRIT----AEQALAHPYF  283 (283)
T ss_pred             HHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence            47899999999999999999    9999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=9.4e-40  Score=309.22  Aligned_cols=248  Identities=21%  Similarity=0.263  Sum_probs=194.8

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~l  166 (451)
                      .||+|+||.||+|.+.....       +..||+|++....  .......+..|+.++++++|+||+++++++. .+..++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~-------~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~l   71 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKK-------QIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALML   71 (257)
T ss_pred             ccCCCCcccEEEEEEecCCC-------ceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEE
Confidence            48999999999998753321       1239999997552  2334456778999999999999999999886 457899


Q ss_pred             EEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCC
Q 013016          167 VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  246 (451)
                      ||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........
T Consensus        72 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  150 (257)
T cd05115          72 VMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS  150 (257)
T ss_pred             EEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence            999999999999887542 4589999999999999999999999999999999999999999999999999742211000


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA  326 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  326 (451)
                      .                                                    ........++..|+|||++.+..++.+
T Consensus       151 ~----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~  178 (257)
T cd05115         151 Y----------------------------------------------------YKARSAGKWPLKWYAPECINFRKFSSR  178 (257)
T ss_pred             c----------------------------------------------------eeccCCCCCCcccCCHHHHccCCCCch
Confidence            0                                                    000000123567999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          327 VDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       327 ~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +|||||||++|+|++ |..||......+....+..+....    .+...+.++.+++.+||..||++||+    +.+|++
T Consensus       179 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~c~~~~~~~Rp~----~~~i~~  250 (257)
T cd05115         179 SDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD----CPAECPPEMYALMKDCWIYKWEDRPN----FAKVEE  250 (257)
T ss_pred             hhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC----CCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            999999999999996 999999887777666665543211    11223448999999999999999999    777754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=9.6e-40  Score=312.80  Aligned_cols=259  Identities=15%  Similarity=0.184  Sum_probs=204.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+....     ...+..|++|++....  .......+..|+.++++++|+||+++++++
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~-----~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   77 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEK-----PGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVC   77 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCC-----CCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            378999999999999999999987622     0012249999886432  334456677899999999999999999987


Q ss_pred             Ee-CCeEEEEEeeccCCchhhhhhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          159 EA-SNFSCIVMEFCSGGDLHSLRHKQPH------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       159 ~~-~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      .. +...++++||+++++|.+++.....      ..+++..++.++.||+.||+|||+++++|+||||+||+++.++.+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k  157 (280)
T cd05043          78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK  157 (280)
T ss_pred             ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence            65 5688999999999999999876432      4589999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||+++.......                                                     ........++..
T Consensus       158 l~d~g~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  184 (280)
T cd05043         158 ITDNALSRDLFPMDY-----------------------------------------------------HCLGDNENRPVK  184 (280)
T ss_pred             ECCCCCcccccCCce-----------------------------------------------------EEeCCCCCcchh
Confidence            999999843211000                                                     000011235667


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||++.+..++.++|||||||++|++++ |+.||......+....+..+. .+..   ....+.++.+++.+||..||
T Consensus       185 y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~li~~~l~~~p  260 (280)
T cd05043         185 WMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RLAQ---PINCPDELFAVMACCWALDP  260 (280)
T ss_pred             ccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CCCC---CCcCCHHHHHHHHHHcCCCh
Confidence            999999998889999999999999999999 999998876666555544432 2211   12234489999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      ++|||    +.+++.
T Consensus       261 ~~Rps----~~~~~~  271 (280)
T cd05043         261 EERPS----FSQLVQ  271 (280)
T ss_pred             hhCCC----HHHHHH
Confidence            99999    888874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-40  Score=347.85  Aligned_cols=260  Identities=22%  Similarity=0.347  Sum_probs=214.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ...+..+.+.||.|+||.||.|...+......    -..||||.+.+.  .+.+....|.+|..+|+.++|||||+++|+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~----~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv  763 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVS----PIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGV  763 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCcc----ceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEe
Confidence            34568889999999999999999876543211    123899988765  456677889999999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP-----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      +.+.+..+|++|||+||+|..+|+..+     ...++..+...++.||++|+.||+++++|||||...|+|++....+||
T Consensus       764 ~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKI  843 (1025)
T KOG1095|consen  764 CLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKI  843 (1025)
T ss_pred             ecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEE
Confidence            999999999999999999999998763     234889999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||+|+.....                                 +|+....                    .-.-...|
T Consensus       844 aDFGlArDiy~~---------------------------------~yyr~~~--------------------~a~lPvkW  870 (1025)
T KOG1095|consen  844 ADFGLARDIYDK---------------------------------DYYRKHG--------------------EAMLPVKW  870 (1025)
T ss_pred             cccchhHhhhhc---------------------------------hheeccC--------------------ccccceec
Confidence            999999522111                                 0000000                    00123469


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcC-CCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      ||||.+..+.++.++|||||||+|||++| |..||...++.+.+..++.+ .+..|...     +..+.+++..||+.+|
T Consensus       871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~C-----P~~ly~lM~~CW~~~p  945 (1025)
T KOG1095|consen  871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYC-----PEKLYQLMLQCWKHDP  945 (1025)
T ss_pred             CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCC-----ChHHHHHHHHHccCCh
Confidence            99999999999999999999999999999 99999999999998866655 44444433     3377899999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      ++||+    +..|++
T Consensus       946 e~RP~----F~~i~~  956 (1025)
T KOG1095|consen  946 EDRPS----FRTIVE  956 (1025)
T ss_pred             hhCcc----HHHHHh
Confidence            99999    888876

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.1e-39  Score=307.80  Aligned_cols=245  Identities=22%  Similarity=0.320  Sum_probs=199.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|.+.+.||.|+||.||+|...+.           .||+|++....     ....+..|+.++++++|+||++++++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~-----------~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~   67 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEYTGQ-----------KVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGV   67 (254)
T ss_pred             cHHHceeeeeeccCCCCceEecccCCC-----------ceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence            447899999999999999999864332           39999986542     22456679999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +..+ ..++||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+
T Consensus        68 ~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~  146 (254)
T cd05083          68 ILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGL  146 (254)
T ss_pred             EcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCcc
Confidence            8765 479999999999999999876556689999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                          ......+..|+|||.
T Consensus       147 ~~~~~~~----------------------------------------------------------~~~~~~~~~y~~pe~  168 (254)
T cd05083         147 ARVGSMG----------------------------------------------------------VDNSKLPVKWTAPEA  168 (254)
T ss_pred             ceecccc----------------------------------------------------------CCCCCCCceecCHHH
Confidence            7421100                                                          001123456999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|+|++ |+.||......+....+..+....+   . ...+..+.+++.+||+.+|.+||+ 
T Consensus       169 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~~l~~~p~~Rp~-  243 (254)
T cd05083         169 LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEP---P-EGCPADVYVLMTSCWETEPKKRPS-  243 (254)
T ss_pred             hccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCC---C-CcCCHHHHHHHHHHcCCChhhCcC-
Confidence            988889999999999999999997 9999988877766666655422111   1 123348999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +++++.
T Consensus       244 ---~~~l~~  249 (254)
T cd05083         244 ---FHKLRE  249 (254)
T ss_pred             ---HHHHHH
Confidence               888764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=9e-40  Score=317.74  Aligned_cols=256  Identities=25%  Similarity=0.338  Sum_probs=207.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|...+.||+|+||.||+|.++.+..         .+|+|.+.............+..|+++++.++|+|++++++++.
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~---------~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   85 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL   85 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCc---------EEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence            458888999999999999999876654         49999986533233344456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||+. |+|.+++.... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.
T Consensus        86 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  163 (308)
T cd06634          86 REHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  163 (308)
T ss_pred             cCCeeEEEEEccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccce
Confidence            9999999999995 68877765442 458999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                           .....|+..|+|||.+.
T Consensus       164 ~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~~  184 (308)
T cd06634         164 IMAP-----------------------------------------------------------ANXFVGTPYWMAPEVIL  184 (308)
T ss_pred             eecC-----------------------------------------------------------cccccCCccccCHHHHh
Confidence            2110                                                           01235788899999975


Q ss_pred             C---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 G---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +   ..++.++|||||||++|+|++|..||...........+........   .....+..+.+||.+||..+|.+||+ 
T Consensus       185 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~-  260 (308)
T cd06634         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPT-  260 (308)
T ss_pred             hcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc---CcccccHHHHHHHHHHhhCCcccCCC-
Confidence            3   4578899999999999999999999987666555555544332211   11223447899999999999999999 


Q ss_pred             CCChHHHHcCCCcCCC
Q 013016          397 KRGAADVKTHPFFKGL  412 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~  412 (451)
                         +.++++|||+...
T Consensus       261 ---~~~ll~~~~~~~~  273 (308)
T cd06634         261 ---SEVLLKHRFVLRE  273 (308)
T ss_pred             ---HHHHhhCcccccc
Confidence               9999999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.4e-39  Score=310.01  Aligned_cols=253  Identities=21%  Similarity=0.269  Sum_probs=192.5

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||+|+||.||+|.+.....       +..+|+|.+.....  ......+.+|+.++++++|+||+++++++.+....+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~-------~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   71 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYT-------PAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYL   71 (269)
T ss_pred             CcccccCCceEEEEEEcCCCC-------ceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcE
Confidence            368999999999998764321       12389998875432  122345677999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccC
Q 013016          166 IVMEFCSGGDLHSLRHKQP---HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN  242 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  242 (451)
                      +||||+++|+|.+++....   ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++....
T Consensus        72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          72 LVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             EEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCcccccccc
Confidence            9999999999999987542   2346778888999999999999999999999999999999999999999999974211


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC-
Q 013016          243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-  321 (451)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  321 (451)
                      ...                                                     .........|+..|+|||++.+. 
T Consensus       152 ~~~-----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~  178 (269)
T cd05087         152 KED-----------------------------------------------------YYVTPDQLWVPLRWIAPELVDEVH  178 (269)
T ss_pred             Ccc-----------------------------------------------------eeecCCCcCCcccccCHhHhcccc
Confidence            000                                                     00011123577889999998642 


Q ss_pred             ------CCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcC-CCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          322 ------SHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       322 ------~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                            .++.++|||||||++|||++ |+.||......+........ ....+........+..+.+++.+|+ .+|++|
T Consensus       179 ~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~R  257 (269)
T cd05087         179 GNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQR  257 (269)
T ss_pred             ccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccC
Confidence                  35789999999999999996 99999876665554433332 2333332222234447899999998 689999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      ||    ++||+.
T Consensus       258 pt----~~~l~~  265 (269)
T cd05087         258 PS----AEEVHL  265 (269)
T ss_pred             CC----HHHHHH
Confidence            99    888874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-39  Score=310.73  Aligned_cols=256  Identities=16%  Similarity=0.217  Sum_probs=204.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|++.+.||+|+||.||+|.++.+++.     ....+|+|++.....  ......+.+|+.++++++|+||+++++++.
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~-----~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEK-----VKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICL   79 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCC-----cceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            6799999999999999999998755421     112489998875532  334466778999999999999999999998


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      . ...++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++.
T Consensus        80 ~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~  157 (279)
T cd05057          80 S-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAK  157 (279)
T ss_pred             c-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence            7 78999999999999999987653 348999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ........                                                     .......++..|+|||.+.
T Consensus       158 ~~~~~~~~-----------------------------------------------------~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05057         158 LLDVDEKE-----------------------------------------------------YHAEGGKVPIKWMALESIL  184 (279)
T ss_pred             cccCcccc-----------------------------------------------------eecCCCcccccccCHHHhh
Confidence            33210000                                                     0000012356799999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++|||||||++|||++ |+.||......+....+..+... +.   +...+.++.+++.+||..||..||+   
T Consensus       185 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~p~~Rp~---  257 (279)
T cd05057         185 HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL-PQ---PPICTIDVYMVLVKCWMIDAESRPT---  257 (279)
T ss_pred             cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-CC---CCCCCHHHHHHHHHHcCCChhhCCC---
Confidence            8889999999999999999998 99999988777766666544321 11   1223348999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.++++
T Consensus       258 -~~~l~~  263 (279)
T cd05057         258 -FKELIN  263 (279)
T ss_pred             -HHHHHH
Confidence             887763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=329.93  Aligned_cols=245  Identities=31%  Similarity=0.536  Sum_probs=202.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      ...|.+...+|.|+|+.|-.|.+..+.+.         +++|++.+..       ....+|+.++... +|+||+++.+.
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~---------~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v  384 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQE---------PAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDV  384 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccc---------hhheeccccc-------cccccccchhhhhcCCCcceeecce
Confidence            37799999999999999999999887765         9999998662       1222366555554 79999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE-ccCCCEEEeccC
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFD  236 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll-~~~~~~kl~Dfg  236 (451)
                      +.++.+.|+|||++.|+-|.+-+...+.  +. ..+..|+++|+.|+.|||++|+|||||||+|||+ +..|+++|+|||
T Consensus       385 ~~~~~~~~~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG  461 (612)
T KOG0603|consen  385 YEDGKEIYLVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFG  461 (612)
T ss_pred             ecCCceeeeeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEec
Confidence            9999999999999999988776665432  33 7788899999999999999999999999999999 588999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++..+..                                                          -.+-+-|..|.|||
T Consensus       462 ~a~~~~~~----------------------------------------------------------~~tp~~t~~y~APE  483 (612)
T KOG0603|consen  462 FWSELERS----------------------------------------------------------CDTPALTLQYVAPE  483 (612)
T ss_pred             hhhhCchh----------------------------------------------------------hcccchhhcccChh
Confidence            98543211                                                          00125678899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++....|+.++||||||++||+||+|+.||.....+ +.+.++..+...       ...+..+++||.+||++||.+|++
T Consensus       484 vl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s-------~~vS~~AKdLl~~LL~~dP~~Rl~  556 (612)
T KOG0603|consen  484 VLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS-------ECVSDEAKDLLQQLLQVDPALRLG  556 (612)
T ss_pred             hhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc-------cccCHHHHHHHHHhccCChhhCcC
Confidence            999999999999999999999999999999986666 555555444333       233449999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.+++.||||.+
T Consensus       557 ----~~~i~~h~w~~~  568 (612)
T KOG0603|consen  557 ----ADEIGAHPWFLS  568 (612)
T ss_pred             ----hhhhccCcchhc
Confidence                999999999933

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.7e-39  Score=306.68  Aligned_cols=249  Identities=24%  Similarity=0.342  Sum_probs=203.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|++.+.||.|+||.||+|.+....          .+|+|++......    ...+..|++++++++|+||+++++++.
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~----------~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKR----------KVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCT   69 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCC----------eEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            67999999999999999999886433          3999998754321    234667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .....|+||||+.+++|.+++.... ..+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~  148 (256)
T cd05112          70 ERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTR  148 (256)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCccee
Confidence            9999999999999999999887643 458999999999999999999999999999999999999999999999999874


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                      ........++..|+|||.+.
T Consensus       149 ~~~~~~------------------------------------------------------~~~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112         149 FVLDDQ------------------------------------------------------YTSSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             ecccCc------------------------------------------------------ccccCCCccchhhcCHhHhc
Confidence            221000                                                      00000113456799999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      ++.++.++||||||+++|+|++ |..||...........+..+...+.    +...+..+.+|+.+||+.+|++||+   
T Consensus       175 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~p~~Rp~---  247 (256)
T cd05112         175 FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK----PRLASQSVYELMQHCWKERPEDRPS---  247 (256)
T ss_pred             cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC----CCCCCHHHHHHHHHHcccChhhCCC---
Confidence            8889999999999999999998 9999988777777776655422211    1223458999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.++++
T Consensus       248 -~~~~l~  253 (256)
T cd05112         248 -FSLLLH  253 (256)
T ss_pred             -HHHHHH
Confidence             999886

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-40  Score=315.01  Aligned_cols=256  Identities=29%  Similarity=0.439  Sum_probs=205.3

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.+.||.|++|.||+|....+++         .||+|++.... ........+..|+.++++++|+||+++++++...
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~---------~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   70 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGE---------IVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTE   70 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCc---------EEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC
Confidence            6678899999999999999887655         49999998653 2233345566799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..++||||++ ++|.+++.... ..+++..++.++.|++.||.|||++||+||||+|+||+++.++.++|+|||++...
T Consensus        71 ~~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~  148 (282)
T cd07829          71 RKLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAF  148 (282)
T ss_pred             CceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCccccc
Confidence            99999999996 69999988753 45999999999999999999999999999999999999999999999999997432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      .....                                                       ......++..|+|||.+.+.
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         149 GIPLR-------------------------------------------------------TYTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             CCCcc-------------------------------------------------------ccCccccCcCcCChHHhcCC
Confidence            11000                                                       00012456779999998776


Q ss_pred             -CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC------------------CCCC-------CCCCCcCh
Q 013016          322 -SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL------------------TFPT-------QSPSSMSE  375 (451)
Q Consensus       322 -~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------------~~~~-------~~~~~~~~  375 (451)
                       .++.++|||||||++|+|++|+.||......+.+.++.....                  .++.       ...+.. +
T Consensus       174 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  252 (282)
T cd07829         174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRL-D  252 (282)
T ss_pred             cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccc-c
Confidence             789999999999999999999999988776655554433110                  0010       001111 3


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ..+.++|.+||..||++||+    +.+++.||||
T Consensus       253 ~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~  282 (282)
T cd07829         253 PEGIDLLSKMLQYNPAKRIS----AKEALKHPYF  282 (282)
T ss_pred             HHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence            47999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.7e-39  Score=304.28  Aligned_cols=244  Identities=23%  Similarity=0.341  Sum_probs=196.1

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~l  166 (451)
                      .||+|+||.||+|......          .+|+|++.....  ......+..|+.+++.++|+||+++++++...+..++
T Consensus         2 ~ig~g~~g~vy~~~~~~~~----------~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   69 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKT----------PVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI   69 (250)
T ss_pred             ccCCCCCceEEEEEecCCc----------EEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEE
Confidence            6899999999999865433          399999875432  2233457779999999999999999999999999999


Q ss_pred             EEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCC
Q 013016          167 VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  246 (451)
                      ||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....... 
T Consensus        70 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-  147 (250)
T cd05085          70 VMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-  147 (250)
T ss_pred             EEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc-
Confidence            999999999999886543 458999999999999999999999999999999999999999999999999974211000 


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA  326 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  326 (451)
                                                                           ........++..|+|||++.+..++.+
T Consensus       148 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~  174 (250)
T cd05085         148 -----------------------------------------------------YSSSGLKQIPIKWTAPEALNYGRYSSE  174 (250)
T ss_pred             -----------------------------------------------------cccCCCCCCcccccCHHHhccCCCCch
Confidence                                                                 000001134567999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          327 VDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       327 ~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||||||+++|+|++ |..||...........+......   .... ..+..+.+|+.+||+.+|++||+    +.|+++
T Consensus       175 ~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~  246 (250)
T cd05085         175 SDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM---SCPQ-KCPDDVYKVMQRCWDYKPENRPK----FSELQK  246 (250)
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC---CCCC-CCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence            999999999999998 99999887766666666544221   1111 23348999999999999999999    888875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.5e-39  Score=319.00  Aligned_cols=258  Identities=25%  Similarity=0.371  Sum_probs=202.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||.|+||.||+|.++.+++         .||+|++.+... .......+..|+.+++.+.||||++++++|.
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   79 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQLTGQ---------NVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFI   79 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECCCCC---------EEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEe
Confidence            779999999999999999999887665         399998865321 1223355667999999999999999999987


Q ss_pred             e-CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 A-SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      . .+..|+||||+ +++|.+++..   ..+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++
T Consensus        80 ~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~  155 (328)
T cd07856          80 SPLEDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLA  155 (328)
T ss_pred             cCCCcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccc
Confidence            5 56889999999 7789888764   34888999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                          ......++..|+|||.+
T Consensus       156 ~~~~~----------------------------------------------------------~~~~~~~~~~y~aPE~~  177 (328)
T cd07856         156 RIQDP----------------------------------------------------------QMTGYVSTRYYRAPEIM  177 (328)
T ss_pred             cccCC----------------------------------------------------------CcCCCcccccccCceee
Confidence            42110                                                          00123577889999998


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--------------------------CCCCCCCCCC
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--------------------------PLTFPTQSPS  371 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~--------------------------~~~~~~~~~~  371 (451)
                      .+ ..++.++|||||||++|+|++|+.||........+..+.+.                          ....+.....
T Consensus       178 ~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (328)
T cd07856         178 LTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKF  257 (328)
T ss_pred             eccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHc
Confidence            66 56899999999999999999999999876543322221110                          0000100000


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      ...+..+.++|.+||+.+|++||+    +.+++.||||....
T Consensus       258 ~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~~~~~~~  295 (328)
T cd07856         258 KNADPSAIDLLEKMLVFDPQKRIS----AAEALAHPYLAPYH  295 (328)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCCcccccc
Confidence            123348999999999999999999    99999999998643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3.3e-39  Score=307.39  Aligned_cols=255  Identities=25%  Similarity=0.321  Sum_probs=202.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.++||+|+||.||+|.+.....      ....||||.+.....  ....+.+..|+.+++++.|+||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~------~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   76 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPEN------EKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVI   76 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCC------CCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence            3679999999999999999998765411      011389999875532  23445677899999999999999999988


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .. +..|+||||+++++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++
T Consensus        77 ~~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~  154 (270)
T cd05056          77 TE-NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS  154 (270)
T ss_pred             cC-CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCcee
Confidence            75 45789999999999999987643 35899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                      .......++..|+|||.+
T Consensus       155 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~aPE~~  180 (270)
T cd05056         155 RYLEDESY------------------------------------------------------YKASKGKLPIKWMAPESI  180 (270)
T ss_pred             eecccccc------------------------------------------------------eecCCCCccccccChhhh
Confidence            43211000                                                      000011345679999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |..||......+....+..+.....   .. ..+..+.+++.+||..+|.+|||  
T Consensus       181 ~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~li~~~l~~~P~~Rpt--  254 (270)
T cd05056         181 NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM---PP-NCPPTLYSLMTKCWAYDPSKRPR--  254 (270)
T ss_pred             ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCC---CC-CCCHHHHHHHHHHcCCChhhCcC--
Confidence            88889999999999999999996 9999988877776666655432211   11 22348999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.+++.
T Consensus       255 --~~~~~~  260 (270)
T cd05056         255 --FTELKA  260 (270)
T ss_pred             --HHHHHH
Confidence              888775

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.1e-40  Score=346.45  Aligned_cols=275  Identities=27%  Similarity=0.393  Sum_probs=208.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +.+|+.+..||+||||.||+|+.+-+++.         ||||.|....  ......++.+|+.++.+|+|||||+++..+
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~---------YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAW  546 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGRE---------YAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAW  546 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchh---------hhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhh
Confidence            46899999999999999999999988775         9999998764  556677888999999999999999987322


Q ss_pred             Ee------------------------------------------------------------------------------
Q 013016          159 EA------------------------------------------------------------------------------  160 (451)
Q Consensus       159 ~~------------------------------------------------------------------------------  160 (451)
                      .+                                                                              
T Consensus       547 VEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~ded  626 (1351)
T KOG1035|consen  547 VESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDED  626 (1351)
T ss_pred             hccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccc
Confidence            00                                                                              


Q ss_pred             ---------------------------------C--------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHH
Q 013016          161 ---------------------------------S--------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE  199 (451)
Q Consensus       161 ---------------------------------~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~q  199 (451)
                                                       +        -.+||.||||+...|.+++..+.... ....+++++++
T Consensus       627 g~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFre  705 (1351)
T KOG1035|consen  627 GRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFRE  705 (1351)
T ss_pred             ccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHH
Confidence                                             0        14789999999988888887764321 47789999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccc
Q 013016          200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRF  279 (451)
Q Consensus       200 il~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (451)
                      |++||.|+|++|||||||||.||++++++.|||+|||+|........                                 
T Consensus       706 IlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~---------------------------------  752 (1351)
T KOG1035|consen  706 ILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE---------------------------------  752 (1351)
T ss_pred             HHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhh---------------------------------
Confidence            99999999999999999999999999999999999999853210000                                 


Q ss_pred             cCCccccccCCCcccccccccccccccccCCCccCcccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHH
Q 013016          280 FGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG---SHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTL  355 (451)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~  355 (451)
                         .......+. .....+......+.+||..|+|||++.+.   .|+.|+||||||+|++||+.   ||.. +.....+
T Consensus       753 ---~~d~~~~~~-~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL  825 (1351)
T KOG1035|consen  753 ---SIDQDLSFS-TNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASIL  825 (1351)
T ss_pred             ---hHhhccCcc-ccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHH
Confidence               000000000 00111122233456999999999999774   49999999999999999994   5643 3344456


Q ss_pred             HHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcC
Q 013016          356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       356 ~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~  410 (451)
                      .++..+.++.+........+ .-..+|++||++||.+|||    |.|||++.||.
T Consensus       826 ~~LR~g~iP~~~~f~~~~~~-~e~slI~~Ll~hdP~kRPt----A~eLL~s~llp  875 (1351)
T KOG1035|consen  826 TNLRKGSIPEPADFFDPEHP-EEASLIRWLLSHDPSKRPT----ATELLNSELLP  875 (1351)
T ss_pred             HhcccCCCCCCcccccccch-HHHHHHHHHhcCCCccCCC----HHHHhhccCCC
Confidence            66666666555222222233 5679999999999999999    99999999998

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.6e-39  Score=309.18  Aligned_cols=247  Identities=21%  Similarity=0.259  Sum_probs=190.4

Q ss_pred             eeccCCeeEEEEEEecccccc---------------CCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQ---------------DRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL  151 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~---------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI  151 (451)
                      +||+|+||.||+|.....+..               .........||+|++....   ......+..|+.+++.++|+||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence            699999999999986533211               1112222459999997543   2234556678899999999999


Q ss_pred             cceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---
Q 013016          152 PTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---  228 (451)
Q Consensus       152 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---  228 (451)
                      +++++++..++..++||||+++++|..++... .+.+++..+..++.||+.||+|||++||+||||||+|||++.++   
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence            99999999999999999999999999888654 34689999999999999999999999999999999999998654   


Q ss_pred             ----CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          229 ----HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       229 ----~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                          .+|++|||++.....                                                           ..
T Consensus       158 ~~~~~~kl~d~g~~~~~~~-----------------------------------------------------------~~  178 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALS-----------------------------------------------------------RE  178 (274)
T ss_pred             CccceeeecCCcccccccc-----------------------------------------------------------cc
Confidence                389999998631100                                                           00


Q ss_pred             ccccCCCccCcccccC-CCCCcchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ...++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||......+... +.......+..     ....+.+++
T Consensus       179 ~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~li  252 (274)
T cd05076         179 ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-FYEKKHRLPEP-----SCKELATLI  252 (274)
T ss_pred             ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-HHHhccCCCCC-----CChHHHHHH
Confidence            1246778999998876 55799999999999999985 6999998765544322 22222222221     123789999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHcC
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+||+.+|++||+    +.+|+++
T Consensus       253 ~~cl~~~p~~Rps----~~~il~~  272 (274)
T cd05076         253 SQCLTYEPTQRPS----FRTILRD  272 (274)
T ss_pred             HHHcccChhhCcC----HHHHHHh
Confidence            9999999999999    9999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.5e-39  Score=310.51  Aligned_cols=255  Identities=19%  Similarity=0.250  Sum_probs=192.6

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.+.||+|+||+||++.......     ..+..||+|++.....  ......+.+|+++++.++|+||+++++++...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPAND-----GTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQ   78 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccC-----CCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4999999999999999887543211     1233599999975421  22345567799999999999999999988653


Q ss_pred             --CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          162 --NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       162 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                        ..+++||||+++++|.+++...   .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  155 (283)
T cd05080          79 GGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAK  155 (283)
T ss_pred             CCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccc
Confidence              4689999999999999998763   49999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ........                                                    ........++..|+|||.+.
T Consensus       156 ~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~PE~~~  183 (283)
T cd05080         156 AVPEGHEY----------------------------------------------------YRVREDGDSPVFWYAVECLK  183 (283)
T ss_pred             ccCCcchh----------------------------------------------------hccCCCCCCCceeeCHhHhc
Confidence            32110000                                                    00000113456699999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH--H------------HHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET--T------------LRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~--~------------~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +..++.++|||||||++|+|++|..||.......  .            +..........+   .+...+..+.+++.+|
T Consensus       184 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~c  260 (283)
T cd05080         184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP---CPKNCPQEVYILMKNC  260 (283)
T ss_pred             ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC---CCCCCCHHHHHHHHHH
Confidence            8889999999999999999999999986543210  0            111111111111   1223345899999999


Q ss_pred             cccCcCCcCCCCCChHHHHc
Q 013016          386 LNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~  405 (451)
                      |+.||++||+    +++++.
T Consensus       261 l~~~p~~Rps----~~~i~~  276 (283)
T cd05080         261 WETEAKFRPT----FRSLIP  276 (283)
T ss_pred             hccChhhCCC----HHHHHH
Confidence            9999999999    888874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-39  Score=308.75  Aligned_cols=246  Identities=20%  Similarity=0.300  Sum_probs=194.8

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEEeCCeEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~~~~~~~  165 (451)
                      .||+|+||.||+|.++.++..       ..+|+|.+....  .......+..|+.++.++ +||||+++++++...+..|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~-------~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~   72 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   72 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCe-------eEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCce
Confidence            589999999999998765432       127888886432  223345667799999999 7999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          166 IVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      +||||+++++|.+++....              ...+++..++.++.|++.||+|||++|++||||||+|||++.++.+|
T Consensus        73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~k  152 (270)
T cd05047          73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK  152 (270)
T ss_pred             EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEE
Confidence            9999999999999987532              13478999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++......                                                        .......++..
T Consensus       153 l~dfgl~~~~~~~--------------------------------------------------------~~~~~~~~~~~  176 (270)
T cd05047         153 IADFGLSRGQEVY--------------------------------------------------------VKKTMGRLPVR  176 (270)
T ss_pred             ECCCCCccccchh--------------------------------------------------------hhccCCCCccc
Confidence            9999987311000                                                        00000123557


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||++.+..++.++|||||||++|+|++ |..||...+..+.+..+...... .  .. ...+.++.+|+.+||..||
T Consensus       177 y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~li~~~l~~~p  252 (270)
T cd05047         177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL-E--KP-LNCDDEVYDLMRQCWREKP  252 (270)
T ss_pred             cCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC-C--CC-CcCCHHHHHHHHHHcccCh
Confidence            999999988889999999999999999997 99999887776666666443211 1  11 1223489999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      .+||+    +.+++.
T Consensus       253 ~~Rps----~~~il~  263 (270)
T cd05047         253 YERPS----FAQILV  263 (270)
T ss_pred             hhCCC----HHHHHH
Confidence            99999    888874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.2e-39  Score=310.00  Aligned_cols=254  Identities=21%  Similarity=0.315  Sum_probs=197.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      +.||.|+||.||+|.++.....   ...+..+|+|.+.+..  .......+.+|+.+++.++|+||+++++++...+..+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~---~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGP---GSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccC---cccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeE
Confidence            3689999999999988654311   1112359999886542  1233456777999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-----CEEEecc
Q 013016          166 IVMEFCSGGDLHSLRHKQP-----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-----HIMLSDF  235 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-----~~kl~Df  235 (451)
                      +||||+++++|.+++....     ...+++..+..++.||+.||+|||+++++|+||||+||+++.++     .++|+||
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df  155 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF  155 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence            9999999999999987532     23478999999999999999999999999999999999999887     8999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                     ........++..|+||
T Consensus       156 g~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~aP  182 (269)
T cd05044         156 GLARDIYKSDY-----------------------------------------------------YRKEGEGLLPVRWMAP  182 (269)
T ss_pred             ccccccccccc-----------------------------------------------------cccCcccCCCccccCH
Confidence            99742211000                                                     0000112456789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||++|+|++ |..||......+....+..+....   .. ...+..+.+|+.+||+.+|.+||
T Consensus       183 E~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~li~~~l~~~p~~Rp  258 (269)
T cd05044         183 ESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQ---KP-ENCPDKIYQLMTNCWAQDPSERP  258 (269)
T ss_pred             HHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccC---Cc-ccchHHHHHHHHHHcCCCcccCC
Confidence            99998889999999999999999998 999998877666666554432111   11 12334899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    ++++++
T Consensus       259 ~----~~~i~~  265 (269)
T cd05044         259 T----FDRIQE  265 (269)
T ss_pred             C----HHHHHH
Confidence            9    888764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-39  Score=303.57  Aligned_cols=246  Identities=25%  Similarity=0.348  Sum_probs=197.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~  165 (451)
                      ++||.|+||.||+|.+.. .+         .||+|++......  .....+..|+.+++++.|+||+++++++...++.+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~---------~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   68 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NT---------EVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY   68 (251)
T ss_pred             CccccCCCceEEEEEEeC-CC---------cEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeE
Confidence            369999999999999876 43         3999998765332  34456778999999999999999999999999999


Q ss_pred             EEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCC
Q 013016          166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP  245 (451)
Q Consensus       166 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  245 (451)
                      +||||+.|++|.+++.... ..+++..+..++.|++.||+|||++|++||||||+|||++.++.++|+|||++.......
T Consensus        69 ~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~  147 (251)
T cd05041          69 IVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI  147 (251)
T ss_pred             EEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence            9999999999999986643 358899999999999999999999999999999999999999999999999974221000


Q ss_pred             CCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCc
Q 013016          246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN  325 (451)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  325 (451)
                      .                                                     ........++..|+|||.+.+..++.
T Consensus       148 ~-----------------------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~  174 (251)
T cd05041         148 Y-----------------------------------------------------TVSDGLKQIPIKWTAPEALNYGRYTS  174 (251)
T ss_pred             c-----------------------------------------------------eeccccCcceeccCChHhhccCCCCc
Confidence            0                                                     00000112355699999998888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          326 AVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       326 ~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      ++|||||||++|+|++ |..||...........+.... ..+   .+...+.++.+++.+||+.+|.+||+    +.|++
T Consensus       175 ~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell  246 (251)
T cd05041         175 ESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RMP---APQLCPEEIYRLMLQCWAYDPENRPS----FSEIY  246 (251)
T ss_pred             chhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CCC---CCccCCHHHHHHHHHHhccChhhCcC----HHHHH
Confidence            9999999999999999 899998876666555554432 111   11223448999999999999999999    99988


Q ss_pred             c
Q 013016          405 T  405 (451)
Q Consensus       405 ~  405 (451)
                      +
T Consensus       247 ~  247 (251)
T cd05041         247 N  247 (251)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=4.2e-39  Score=303.74  Aligned_cols=255  Identities=25%  Similarity=0.359  Sum_probs=206.7

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      +++.+.||.|+||.||+|.+.....     ..+..||+|++.....  ......+..|+.+++.++|+||+++++++...
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   73 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSG-----EKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEE   73 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCC-----CCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            3567889999999999999876541     1123599999975532  12445677799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..++||||+++++|.+++.......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...
T Consensus        74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~  153 (258)
T smart00219       74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDL  153 (258)
T ss_pred             CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceec
Confidence            99999999999999999988754444899999999999999999999999999999999999999999999999997432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      .....                                               +.       .....++..|+|||.+.+.
T Consensus       154 ~~~~~-----------------------------------------------~~-------~~~~~~~~~y~~Pe~~~~~  179 (258)
T smart00219      154 YDDDY-----------------------------------------------YK-------KKGGKLPIRWMAPESLKDG  179 (258)
T ss_pred             ccccc-----------------------------------------------cc-------cccCCCcccccChHHhccC
Confidence            21100                                               00       0001367789999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          322 SHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      .++.++||||||+++|+|++ |..||...........+.........    ...+.++.+++.+||..||++|||    +
T Consensus       180 ~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rpt----~  251 (258)
T smart00219      180 KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKP----ENCPPEIYKLMLQCWAEDPEDRPT----F  251 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC----CcCCHHHHHHHHHHCcCChhhCcC----H
Confidence            89999999999999999998 89999887777777777665432221    123448999999999999999999    9


Q ss_pred             HHHHc
Q 013016          401 ADVKT  405 (451)
Q Consensus       401 ~ell~  405 (451)
                      .++++
T Consensus       252 ~~ll~  256 (258)
T smart00219      252 SELVE  256 (258)
T ss_pred             HHHHh
Confidence            99885

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.4e-39  Score=308.06  Aligned_cols=244  Identities=19%  Similarity=0.254  Sum_probs=188.8

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~l  166 (451)
                      .||.|+||.||+|.++.....  +......+|+|++....   ....+.+..|+.+++.+.|+||+++++++..++..++
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~--~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l   76 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDY--GELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIM   76 (258)
T ss_pred             CCCcccchhheeeeecccccc--cccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEE
Confidence            689999999999987654321  01111237888875432   2334566678999999999999999999999999999


Q ss_pred             EEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC--------EEEeccCcc
Q 013016          167 VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--------IMLSDFDLS  238 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~--------~kl~Dfg~a  238 (451)
                      ||||+++|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.        ++++|||++
T Consensus        77 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          77 VQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             EEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence            999999999999987653 35899999999999999999999999999999999999987765        689999986


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                           .....|+..|+|||++
T Consensus       156 ~~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~~  176 (258)
T cd05078         156 ITVLP-----------------------------------------------------------KEILLERIPWVPPECI  176 (258)
T ss_pred             cccCC-----------------------------------------------------------chhccccCCccCchhc
Confidence            32110                                                           0123577889999999


Q ss_pred             cCC-CCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 SGG-SHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 ~~~-~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .+. .++.++|||||||++|+|++| ..||......... .+......++...     ..++.+|+.+||+.||++||| 
T Consensus       177 ~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~li~~~l~~~p~~Rps-  249 (258)
T cd05078         177 ENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLPAPK-----WTELANLINQCMDYEPDFRPS-  249 (258)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCCCCC-----cHHHHHHHHHHhccChhhCCC-
Confidence            874 478999999999999999998 4666554443332 2333333333222     237999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         ++++++
T Consensus       250 ---~~~il~  255 (258)
T cd05078         250 ---FRAIIR  255 (258)
T ss_pred             ---HHHHHH
Confidence               999886

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=6.6e-39  Score=305.25  Aligned_cols=252  Identities=17%  Similarity=0.257  Sum_probs=192.0

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~l  166 (451)
                      +||+|+||.||+|.......       ...+++|.+.....  ......+.+|+.+++.++||||+++++.+......|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~-------~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~l   72 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTG-------VARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLL   72 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCC-------cceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEE
Confidence            69999999999997654332       12367777664421  2334567789999999999999999999999999999


Q ss_pred             EEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          167 VMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      ||||+++|+|.+++....  ...+++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++......
T Consensus        73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          73 VFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             EEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc
Confidence            999999999999987642  234677888999999999999999999999999999999999999999999986321000


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC----
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG----  320 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----  320 (451)
                                                                           ..........|+..|+|||++.+    
T Consensus       153 -----------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~  179 (268)
T cd05086         153 -----------------------------------------------------DYIETEDDKCVPLRWLAPELVGEFHGG  179 (268)
T ss_pred             -----------------------------------------------------hhhhcccCCcCcccccCchhcccccCc
Confidence                                                                 00001112367889999999753    


Q ss_pred             ---CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          321 ---GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       321 ---~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                         ..++.++|||||||++|||++ |..||......+.+..+..+. ...+........+..+.+++..|+ .+|.+||+
T Consensus       180 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~  258 (268)
T cd05086         180 LITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT  258 (268)
T ss_pred             cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC
Confidence               235789999999999999997 677998777766666655442 222222222234458899999999 78999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +++|++
T Consensus       259 ----~~~i~~  264 (268)
T cd05086         259 ----AEEVHR  264 (268)
T ss_pred             ----HHHHHH
Confidence                998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-41  Score=357.26  Aligned_cols=259  Identities=30%  Similarity=0.477  Sum_probs=212.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +++-..+||.|.||.||.|...+++.         +.|+|-+.-.... ...+..+.+|..++..++|||+|+.||+-.+
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGe---------llAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH 1305 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGE---------LLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH 1305 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccc---------hhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeec
Confidence            35556789999999999999887765         6999988765443 5566778889999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .+..+|.||||.||+|.+++...  ...++.....+..|++.||.|||+.|||||||||+||+++.+|.+|++|||.|..
T Consensus      1306 Rekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred             HHHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeE
Confidence            99999999999999999998875  4477888888999999999999999999999999999999999999999999854


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ......                                        .           ....-....||+.|||||++.|
T Consensus      1384 i~~~~~----------------------------------------~-----------~~~el~~~~GT~~YMAPEvit~ 1412 (1509)
T KOG4645|consen 1384 IKNNAQ----------------------------------------T-----------MPGELQSMMGTPMYMAPEVITG 1412 (1509)
T ss_pred             ecCchh----------------------------------------c-----------CCHHHHhhcCCchhcCchhhcc
Confidence            322100                                        0           0011113589999999999987


Q ss_pred             C---CCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcC-CCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          321 G---SHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKK-PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       321 ~---~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      .   +.+.++||||||||+.||+||+.||...++ ..++..+-.+ .+.+|..    + +.+.++||.+||+.||.+|++
T Consensus      1413 t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~----l-s~~g~dFle~Cl~~dP~~Rw~ 1487 (1509)
T KOG4645|consen 1413 TKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER----L-SSEGRDFLEHCLEQDPKMRWT 1487 (1509)
T ss_pred             cccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh----h-hHhHHHHHHHHHhcCchhhhH
Confidence            4   357899999999999999999999988544 4555555444 3344443    2 338899999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.|||+|.|-+.
T Consensus      1488 ----~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1488 ----ASQLLEHAFGKS 1499 (1509)
T ss_pred             ----HHHHHHhhcccc
Confidence                999999999765

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.9e-39  Score=310.31  Aligned_cols=259  Identities=21%  Similarity=0.288  Sum_probs=196.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|++.++||+|+||.||+|.+.....     ..+..||+|.+....  .......+.+|+.+++++.|+||+++++++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGD-----NTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICT   76 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCC-----CccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            348999999999999999998643211     222359999987542  2333456788999999999999999999987


Q ss_pred             eC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 AS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..  ...++||||++|++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||+
T Consensus        77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~  155 (284)
T cd05079          77 EDGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL  155 (284)
T ss_pred             cCCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcc
Confidence            75  57899999999999999987653 3589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.........                                                    ........|+..|+|||.
T Consensus       156 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~apE~  183 (284)
T cd05079         156 TKAIETDKEY----------------------------------------------------YTVKDDLDSPVFWYAPEC  183 (284)
T ss_pred             ccccccCccc----------------------------------------------------eeecCCCCCCccccCHHH
Confidence            7532110000                                                    000112356778999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--------------HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--------------ETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~--------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      +.+..++.++|||||||++|+|++++.|+.....              ..............+.   +...+..+.+|+.
T Consensus       184 ~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~  260 (284)
T cd05079         184 LIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPR---PPNCPEEVYQLMR  260 (284)
T ss_pred             hccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCC---CCCCCHHHHHHHH
Confidence            9888899999999999999999998776532110              1111111111111111   1223448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.||.+||+    +.++++
T Consensus       261 ~~l~~~p~~Rpt----~~~il~  278 (284)
T cd05079         261 KCWEFQPSKRTT----FQNLIE  278 (284)
T ss_pred             HHccCCcccCcC----HHHHHH
Confidence            999999999999    999886

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-39  Score=331.58  Aligned_cols=258  Identities=28%  Similarity=0.436  Sum_probs=221.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +-|++...||.|.+|.||+++.+.+++         ..|+||.....    ...+.++.|..+++.. .|||++.+|++|
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~~~---------~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKTGQ---------LAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeecCc---------eeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            569999999999999999999887765         48999887542    3345566688899887 699999999999


Q ss_pred             Ee-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          159 EA-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       159 ~~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..     ++.++||||||.|||..|+++...+.++.|..+.-|++.++.||.+||.+.++|||||-.|||++.+|.|||+
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence            53     4689999999999999999999888899999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||.+..                                                       .+....+.++++||+.||
T Consensus       166 DFGvSaQ-------------------------------------------------------ldsT~grRnT~iGtP~WM  190 (953)
T KOG0587|consen  166 DFGVSAQ-------------------------------------------------------LDSTVGRRNTFIGTPYWM  190 (953)
T ss_pred             eeeeeee-------------------------------------------------------eecccccccCcCCCcccc
Confidence            9999732                                                       123445566789999999


Q ss_pred             CcccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          314 SPEVASGG-----SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       314 aPE~~~~~-----~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      |||++...     .|+..+|+||||++..||-.|.+|+.++.....+-.|.+.++  |...-+..+..++.+||..||.+
T Consensus       191 APEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP--PkLkrp~kWs~~FndFIs~cL~K  268 (953)
T KOG0587|consen  191 APEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PKLKRPKKWSKKFNDFISTCLVK  268 (953)
T ss_pred             cceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC--ccccchhhHHHHHHHHHHHHHhh
Confidence            99999653     367899999999999999999999999888777666655533  33343455666999999999999


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCC
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      |-++||+    ..++|+|||+++
T Consensus       269 d~e~RP~----~~~ll~hpFi~e  287 (953)
T KOG0587|consen  269 DYEQRPS----TEELLKHPFITE  287 (953)
T ss_pred             ccccCcc----hhhhccCCcccc
Confidence            9999999    999999999996

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.5e-39  Score=304.42  Aligned_cols=248  Identities=20%  Similarity=0.255  Sum_probs=190.2

Q ss_pred             eeeccCCeeEEEEEEeccccccC---CCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCC
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQD---RGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASN  162 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~---~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~  162 (451)
                      +.||+|+||.||+|.........   ........+|+|++....   ......+..|+.+++.++||||+++++++..+.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            36899999999999865332110   111222358999886542   233445667889999999999999999999999


Q ss_pred             eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC-------EEEecc
Q 013016          163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH-------IMLSDF  235 (451)
Q Consensus       163 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~-------~kl~Df  235 (451)
                      ..++||||+++++|..++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.       ++++||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            999999999999998887654 345899999999999999999999999999999999999987664       899999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                           .....|+..|+||
T Consensus       157 g~~~~~~~-----------------------------------------------------------~~~~~~~~~y~aP  177 (262)
T cd05077         157 GIPITVLS-----------------------------------------------------------RQECVERIPWIAP  177 (262)
T ss_pred             CCCccccC-----------------------------------------------------------cccccccccccCh
Confidence            98732110                                                           0112577889999


Q ss_pred             cccc-CCCCCcchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          316 EVAS-GGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       316 E~~~-~~~~~~~~DIwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |++. +..++.++|||||||++|+|+ +|..||......+. ..+.........     ....++.+|+.+||+.||.+|
T Consensus       178 E~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~li~~cl~~dp~~R  251 (262)
T cd05077         178 ECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQCMLVT-----PSCKELADLMTHCMNYDPNQR  251 (262)
T ss_pred             hhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCccCCC-----CChHHHHHHHHHHcCCChhhC
Confidence            9987 456899999999999999998 58888876543332 222232222111     122378999999999999999


Q ss_pred             CCCCCChHHHHcC
Q 013016          394 LGSKRGAADVKTH  406 (451)
Q Consensus       394 pt~~~~~~ell~h  406 (451)
                      |+    +.+|+++
T Consensus       252 p~----~~~il~~  260 (262)
T cd05077         252 PF----FRAIMRD  260 (262)
T ss_pred             cC----HHHHHHh
Confidence            99    9999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=316.63  Aligned_cols=256  Identities=20%  Similarity=0.300  Sum_probs=209.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +...+.++||+|-||.|.+|...+..          +||||+++....  ......|..|+++|.+|+||||++++++|.
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~l----------kVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~  605 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPL----------KVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCV  605 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCce----------EEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence            34788999999999999999987633          499999987743  334577888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++.+|+|+||+++|+|.+++......-+.-.....|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||.++
T Consensus       606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence            99999999999999999999987643334556677799999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      -+-                                                     ..+........+-...|||+|.+.
T Consensus       686 ~ly-----------------------------------------------------sg~yy~vqgr~vlpiRwmawEsil  712 (807)
T KOG1094|consen  686 NLY-----------------------------------------------------SGDYYRVQGRAVLPIRWMAWESIL  712 (807)
T ss_pred             ccc-----------------------------------------------------cCCceeeecceeeeeeehhHHHHH
Confidence            211                                                     111111112235567899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhc---CCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY--GRTPFAAPSNETTLRNIVK---KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      -++++.++|||+||+++||+++  .+.||....+++...+...   ....-.-...+...++.+.+++.+|+..|-++||
T Consensus       713 lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RP  792 (807)
T KOG1094|consen  713 LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRP  792 (807)
T ss_pred             hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCC
Confidence            9999999999999999999875  8999998888877665433   2222222233456777899999999999999999


Q ss_pred             CCCCChHHHH
Q 013016          395 GSKRGAADVK  404 (451)
Q Consensus       395 t~~~~~~ell  404 (451)
                      +    +++|-
T Consensus       793 s----Fe~lh  798 (807)
T KOG1094|consen  793 S----FEQLH  798 (807)
T ss_pred             C----HHHHH
Confidence            9    88874

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.1e-38  Score=302.33  Aligned_cols=252  Identities=17%  Similarity=0.244  Sum_probs=193.3

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE-eCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE-ASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~-~~~~~  164 (451)
                      +.||+|+||.||+|.+.....      ....+|+|.+....  .......+..|+.+++.++|+||+++++++. .++..
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~------~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   72 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDG------QKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSP   72 (262)
T ss_pred             CcccccCCceEEEEEEecCCC------ceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCc
Confidence            368999999999998754321      12359999986431  2233456677999999999999999999775 45678


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCC
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI  244 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  244 (451)
                      ++||||+.+++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus        73 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058          73 LVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK  151 (262)
T ss_pred             EEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCC
Confidence            99999999999999987653 34678888999999999999999999999999999999999999999999997422110


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCC
Q 013016          245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG  324 (451)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  324 (451)
                      ...                                                   .........++..|+|||.+.+..++
T Consensus       152 ~~~---------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~  180 (262)
T cd05058         152 EYY---------------------------------------------------SVHNHTGAKLPVKWMALESLQTQKFT  180 (262)
T ss_pred             cce---------------------------------------------------eecccccCcCCccccChhHhccCccc
Confidence            000                                                   00000112456789999999888899


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHH
Q 013016          325 NAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV  403 (451)
Q Consensus       325 ~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~el  403 (451)
                      .++|||||||++|||++ |.+||......+....+..+.....    +...+..+.+++.+||..+|++||+    +.+|
T Consensus       181 ~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i  252 (262)
T cd05058         181 TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ----PEYCPDPLYEVMLSCWHPKPEMRPT----FSEL  252 (262)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC----CCcCCHHHHHHHHHHcCCChhhCCC----HHHH
Confidence            99999999999999999 5677877666666665555432111    1123448999999999999999999    8888


Q ss_pred             Hc
Q 013016          404 KT  405 (451)
Q Consensus       404 l~  405 (451)
                      ++
T Consensus       253 l~  254 (262)
T cd05058         253 VS  254 (262)
T ss_pred             HH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.3e-39  Score=310.60  Aligned_cols=257  Identities=18%  Similarity=0.236  Sum_probs=199.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..++..     ....+|+|++.....  ......+..|+.+++.++|+||+++++++.
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~   79 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGET-----VKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCL   79 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCc-----ceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence            6799999999999999999998755431     112379998875422  222345677999999999999999999987


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .. ..++|+||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus        80 ~~-~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~  157 (303)
T cd05110          80 SP-TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (303)
T ss_pred             CC-CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence            54 5679999999999999887643 358999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                     ........++..|+|||.+.
T Consensus       158 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         158 LLEGDEK-----------------------------------------------------EYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             cccCccc-----------------------------------------------------ccccCCCccccccCCHHHhc
Confidence            3211000                                                     00001124567899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++|||||||++|||++ |..||.+.........+..+ ..++.   +...+.++.+++.+||..+|++||+   
T Consensus       185 ~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~---  257 (303)
T cd05110         185 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ERLPQ---PPICTIDVYMVMVKCWMIDADSRPK---  257 (303)
T ss_pred             cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCC---CCCCCHHHHHHHHHHcCCChhhCcC---
Confidence            8889999999999999999997 99999876555444333332 22221   1223448999999999999999999   


Q ss_pred             ChHHHHcC
Q 013016          399 GAADVKTH  406 (451)
Q Consensus       399 ~~~ell~h  406 (451)
                       +.++++.
T Consensus       258 -~~~l~~~  264 (303)
T cd05110         258 -FKELAAE  264 (303)
T ss_pred             -HHHHHHH
Confidence             8887763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-41  Score=299.57  Aligned_cols=260  Identities=24%  Similarity=0.309  Sum_probs=208.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHH-HCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK-MLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~nIv~l~~~~  158 (451)
                      .+.+-...||.|+||+|++..++..++         ++|||.|+....  .....++..|.+... .-++||||++||++
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~---------~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~  132 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGK---------LMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGAL  132 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCc---------EEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence            445566789999999999999887765         699999987644  334455666766554 45799999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhh---hCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEccCCCEEEec
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRH---KQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~---~~~~~~l~~~~~~~i~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..++..++.||+| ..||..+..   ......+++..+.+|....+.||.||. ...||||||||+|||++..|.+||||
T Consensus       133 F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCD  211 (361)
T KOG1006|consen  133 FSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCD  211 (361)
T ss_pred             hcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeec
Confidence            9999999999999 788876543   333456999999999999999999999 56899999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++-.+...-+..                                                        .-.|...|||
T Consensus       212 FGIcGqLv~SiAkT--------------------------------------------------------~daGCrpYmA  235 (361)
T KOG1006|consen  212 FGICGQLVDSIAKT--------------------------------------------------------VDAGCRPYMA  235 (361)
T ss_pred             ccchHhHHHHHHhh--------------------------------------------------------hccCCccccC
Confidence            99984322111100                                                        0168889999


Q ss_pred             cccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCCCCCCCCCC-CcChHHHHHHHHHhcccCc
Q 013016          315 PEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPLTFPTQSPS-SMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       315 PE~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~ll~~~L~~dP  390 (451)
                      ||-+..  ..|+.++||||||++|||+.||+.||...+ ..+.+..++.+.++....... -..+..+..+|..||.+|-
T Consensus       236 PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~  315 (361)
T KOG1006|consen  236 PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDR  315 (361)
T ss_pred             hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhccc
Confidence            999864  458999999999999999999999999854 456677777776654433322 3355589999999999999


Q ss_pred             CCcCCCCCChHHHHcCCCcCC
Q 013016          391 CNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ..||.    ..+|+++||++-
T Consensus       316 ~~Rpk----y~~Lk~~~fyr~  332 (361)
T KOG1006|consen  316 SDRPK----YDDLKKFPFYRM  332 (361)
T ss_pred             ccCcc----hhhhhcCchhhh
Confidence            99999    999999999987

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.4e-38  Score=305.30  Aligned_cols=258  Identities=22%  Similarity=0.326  Sum_probs=193.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.......     ..+..||+|.+....   ......+..|+++++.++|+||+++++++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   75 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQD-----NTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCY   75 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcC-----CCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEc
Confidence            579999999999999999998542111     112359999986542   233456778999999999999999999875


Q ss_pred             e--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 A--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      .  ...+++||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~  154 (284)
T cd05081          76 SAGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGL  154 (284)
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcc
Confidence            4  347899999999999999987643 3589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.........                                                    ........++..|+|||+
T Consensus       155 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~aPE~  182 (284)
T cd05081         155 TKVLPQDKEY----------------------------------------------------YKVREPGESPIFWYAPES  182 (284)
T ss_pred             cccccCCCcc----------------------------------------------------eeecCCCCCceEeeCHHH
Confidence            8532110000                                                    000000123445999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH---------------HHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---------------TTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      +.+..++.++|||||||++|||++|..++......               ..+..+......++.   ....+.++.+|+
T Consensus       183 ~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li  259 (284)
T cd05081         183 LTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPA---PPGCPAEIYAIM  259 (284)
T ss_pred             hccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCC---CCCCCHHHHHHH
Confidence            99888999999999999999999988776443211               011122222211111   122334899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHc
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+||..+|++|||    +.||++
T Consensus       260 ~~cl~~~p~~Rpt----~~ei~~  278 (284)
T cd05081         260 KECWNNDPSQRPS----FSELAL  278 (284)
T ss_pred             HHHccCChhhCCC----HHHHHH
Confidence            9999999999999    998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=6.5e-39  Score=299.79  Aligned_cols=233  Identities=28%  Similarity=0.443  Sum_probs=184.9

Q ss_pred             CCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEEEee
Q 013016           91 GDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEF  170 (451)
Q Consensus        91 G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~  170 (451)
                      |.+|.||+|.++.+++.         ||+|++.....        ...|...+....||||+++++++...+..|+||||
T Consensus         4 g~~~~v~~~~~~~~~~~---------~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   66 (237)
T cd05576           4 GVIDKVLLVMDTRTQQT---------FILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQH   66 (237)
T ss_pred             cccceEEEEEEccCCcE---------EEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEec
Confidence            89999999999877664         99999976421        12244445556799999999999999999999999


Q ss_pred             ccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCC
Q 013016          171 CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP  250 (451)
Q Consensus       171 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  250 (451)
                      ++|++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+......      
T Consensus        67 ~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------  138 (237)
T cd05576          67 AEGGKLWSHISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------  138 (237)
T ss_pred             CCCCCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc------
Confidence            9999999988765  34899999999999999999999999999999999999999999999999986321100      


Q ss_pred             CCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHH
Q 013016          251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWW  330 (451)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIw  330 (451)
                                                                          .....++..|+|||.+.+..++.++|||
T Consensus       139 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  166 (237)
T cd05576         139 ----------------------------------------------------CDGEAVENMYCAPEVGGISEETEACDWW  166 (237)
T ss_pred             ----------------------------------------------------cccCCcCccccCCcccCCCCCCchhhHH
Confidence                                                                0012456679999999888889999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHHHHcCCCc
Q 013016          331 AFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFF  409 (451)
Q Consensus       331 SlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~ell~hp~~  409 (451)
                      |+||++|+|++|+.|+........  .  ......+     ...+..+.++|.+||+.||++|+++ ...++++++||||
T Consensus       167 slG~il~el~~g~~~~~~~~~~~~--~--~~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         167 SLGAILFELLTGKTLVECHPSGIN--T--HTTLNIP-----EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHHHCcchhhcCchhcc--c--ccccCCc-----ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            999999999999988764321100  0  0011111     2234489999999999999999993 1225999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-38  Score=302.29  Aligned_cols=253  Identities=27%  Similarity=0.418  Sum_probs=203.2

Q ss_pred             CceEEeeeccCCeeEEEEEEecc-ccccCCCCCCcceEEEEEcchHHH-------HHHHHHHHHHHHHHHHHH-CCCCCc
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNN-KYRQDRGHEPCCLYAMKVVNKEVL-------EKKKKVHRAEMEKKILKM-LDHPFL  151 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~nI  151 (451)
                      +|++.+.||+|+||.||+|.++. ..+         .+|+|.+.....       ........+..|+.++.+ ++|+||
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~---------~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i   71 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQN---------LLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNI   71 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCc---------eeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCe
Confidence            47888999999999999999877 222         499998864321       122334556678887765 799999


Q ss_pred             cceeEEEEeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCC
Q 013016          152 PTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       152 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~  228 (451)
                      +++++++..+++.|+||||++|++|.+++...  ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~  151 (269)
T cd08528          72 VRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD  151 (269)
T ss_pred             eeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC
Confidence            99999999999999999999999999987542  23568999999999999999999996 7899999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .++|+|||.+.......                                                        ......|
T Consensus       152 ~~~l~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~  175 (269)
T cd08528         152 KVTITDFGLAKQKQPES--------------------------------------------------------KLTSVVG  175 (269)
T ss_pred             cEEEecccceeeccccc--------------------------------------------------------ccccccC
Confidence            99999999974321100                                                        1112368


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      +..|+|||.+.+..++.++||||||+++|+|++|+.||...........+.........   ....+..+.+|+.+||+.
T Consensus       176 ~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~  252 (269)
T cd08528         176 TILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP---EGMYSEDVTDVITSCLTP  252 (269)
T ss_pred             cccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC---cccCCHHHHHHHHHHCCC
Confidence            88999999999888999999999999999999999999877766666666554432211   122344899999999999


Q ss_pred             CcCCcCCCCCChHHHHc
Q 013016          389 DPCNRLGSKRGAADVKT  405 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~  405 (451)
                      ||++||+    +.|+..
T Consensus       253 ~p~~Rp~----~~e~~~  265 (269)
T cd08528         253 DAEARPD----IIQVSA  265 (269)
T ss_pred             CCccCCC----HHHHHH
Confidence            9999999    888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.1e-38  Score=299.52  Aligned_cols=245  Identities=22%  Similarity=0.264  Sum_probs=189.9

Q ss_pred             eeeccCCeeEEEEEEeccccccCCC-CCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeE
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRG-HEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS  164 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~  164 (451)
                      +.||+|+||.||+|.+......... ......+++|++.....    ....+.+|+.++++++|+||+++++++.. +..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            3689999999999998765421000 01112378887764421    14666779999999999999999999988 778


Q ss_pred             EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-------CEEEeccCc
Q 013016          165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-------HIMLSDFDL  237 (451)
Q Consensus       165 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-------~~kl~Dfg~  237 (451)
                      ++||||+++++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.++       .+||+|||+
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~  154 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI  154 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence            999999999999999887542 589999999999999999999999999999999999999887       799999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.....                                                           .....++..|+|||+
T Consensus       155 a~~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~  175 (259)
T cd05037         155 PITVLS-----------------------------------------------------------REERVERIPWIAPEC  175 (259)
T ss_pred             cccccc-----------------------------------------------------------ccccccCCCccChhh
Confidence            742210                                                           001246677999999


Q ss_pred             ccCC--CCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          318 ASGG--SHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       318 ~~~~--~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      +.+.  .++.++|||||||++|+|++ |..||......+....... ....+...     ...+.+++.+||+.+|.+||
T Consensus       176 ~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~li~~~l~~~p~~Rp  249 (259)
T cd05037         176 IRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHRLPMPD-----CAELANLINQCWTYDPTKRP  249 (259)
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCCCCCCC-----chHHHHHHHHHhccChhhCC
Confidence            9876  68999999999999999999 6888877654333332221 11111111     13899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    +.++++
T Consensus       250 t----~~~il~  256 (259)
T cd05037         250 S----FRAILR  256 (259)
T ss_pred             C----HHHHHH
Confidence            9    999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-38  Score=304.06  Aligned_cols=259  Identities=23%  Similarity=0.338  Sum_probs=200.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+.....     ..+..||||++......  .....+..|+.+++.+.|+||+++++++.
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~-----~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~   76 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGD-----NTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCE   76 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCC-----CCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence            568899999999999999998754311     12235999999765332  34567788999999999999999999988


Q ss_pred             e--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 A--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      .  ....++||||+++++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||+
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  155 (284)
T cd05038          77 KPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGL  155 (284)
T ss_pred             cCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccc
Confidence            7  568999999999999999987654 3589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.........                                                    ........++..|+|||.
T Consensus       156 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~Pe~  183 (284)
T cd05038         156 AKVLPEDKDY----------------------------------------------------YYVKEPGESPIFWYAPEC  183 (284)
T ss_pred             ccccccCCcc----------------------------------------------------eeccCCCCCcccccCcHH
Confidence            8432210000                                                    000001134556999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE--------------TTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~--------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      +.+..++.++|||||||++|+|++|..|+......              ..+...+......+.   +...+.++.+|+.
T Consensus       184 ~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~  260 (284)
T cd05038         184 LRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR---PPSCPDEVYDLMK  260 (284)
T ss_pred             HccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC---CccCCHHHHHHHH
Confidence            98888999999999999999999999998654222              122223332222221   1223348999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.+|.+||+    +.||++
T Consensus       261 ~cl~~~p~~Rpt----~~ei~~  278 (284)
T cd05038         261 LCWEAEPQDRPS----FADLIL  278 (284)
T ss_pred             HHhccChhhCCC----HHHHHH
Confidence            999999999999    888874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=9.5e-38  Score=301.52  Aligned_cols=259  Identities=15%  Similarity=0.153  Sum_probs=185.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HH------HHHHHHHHHHHHHHHCCCCCc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KK------KKVHRAEMEKKILKMLDHPFL  151 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~------~~~~~~~~e~~~l~~l~h~nI  151 (451)
                      ++|.+.++||+|+||+||+|.+..+..      ....+|+|+.......  ..      ........+...+..+.|+||
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~------~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i   85 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHC------INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI   85 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcc------cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence            679999999999999999999876511      0113677764322110  00      001111223344556789999


Q ss_pred             cceeEEEEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          152 PTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       152 v~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      +++++++....    +.++++|++ ..++.+++...  ...++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~  162 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN  162 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            99999776543    557889987 56777766553  336788899999999999999999999999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +.++|+|||+|...........                                                ..........
T Consensus       163 ~~~~l~DFGla~~~~~~~~~~~------------------------------------------------~~~~~~~~~~  194 (294)
T PHA02882        163 NRGYIIDYGIASHFIIHGKHIE------------------------------------------------YSKEQKDLHR  194 (294)
T ss_pred             CcEEEEEcCCceeeccCCcccc------------------------------------------------cccccccccC
Confidence            9999999999853321000000                                                0001112246


Q ss_pred             cCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHH--------HHHHhcCCCCCCCCCCCCcChHHH
Q 013016          308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETT--------LRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       308 gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~--------~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                      ||+.|+|||+..+..++.++|||||||++|||++|+.||..... ...        ...+..+...++      ..+..+
T Consensus       195 gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  268 (294)
T PHA02882        195 GTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIK------NANKFI  268 (294)
T ss_pred             CCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccC------CCCHHH
Confidence            99999999999999999999999999999999999999987632 221        222222222111      123489


Q ss_pred             HHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          379 RDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+++..|+..+|++||+    +.+|++
T Consensus       269 ~~~~~~~~~~~~~~rp~----~~~l~~  291 (294)
T PHA02882        269 YDFIECVTKLSYEEKPD----YDALIK  291 (294)
T ss_pred             HHHHHHHHhCCCCCCCC----HHHHHH
Confidence            99999999999999999    888864

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-40  Score=295.12  Aligned_cols=269  Identities=28%  Similarity=0.378  Sum_probs=209.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.-..+||+|.||.||+|+.+++++.         ||+|++-.+. .....-....+|+.+|..+.|+|++.+++.|.
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kk---------valkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~   86 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKK---------VALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICR   86 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccch---------hHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence            4577788999999999999999888764         8888764321 11222334567999999999999999998874


Q ss_pred             e--------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          160 A--------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       160 ~--------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      .        ...+||||.+| .-+|.-++.+. ..+|+...+++++.+++.||.|+|.+.|+|||+|++|+||+.+|.+|
T Consensus        87 tk~Tp~~r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilk  164 (376)
T KOG0669|consen   87 TKATPTNRDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILK  164 (376)
T ss_pred             hccCCcccccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEE
Confidence            3        23699999999 45777777554 35699999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||+++.+.........                                                   +....+-|.+
T Consensus       165 lADFGlar~fs~~~n~~kp---------------------------------------------------rytnrvvTLw  193 (376)
T KOG0669|consen  165 LADFGLARAFSTSKNVVKP---------------------------------------------------RYTNRVVTLW  193 (376)
T ss_pred             eeccccccceecccccCCC---------------------------------------------------Ccccceeeee
Confidence            9999998654432221110                                                   0112266899


Q ss_pred             ccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCc-----------------
Q 013016          312 YVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM-----------------  373 (451)
Q Consensus       312 y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------  373 (451)
                      |++||.++|. .|+.+.|||..|||+.||+||.+.+.+..+...+..|..--..+..+.|++.                 
T Consensus       194 YrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~  273 (376)
T KOG0669|consen  194 YRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKG  273 (376)
T ss_pred             cCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcc
Confidence            9999999984 5899999999999999999999999998887766665442222222222111                 


Q ss_pred             -------------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          374 -------------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       374 -------------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                                   .++++.+|+.++|..||.+|++    ++++|+|.||...+.+
T Consensus       274 ~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~----ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  274 QKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID----ADQALNHDFFWKDPMP  324 (376)
T ss_pred             hhhhhhhhcccccCChhHHHHHHHHhccCcccCcc----hHhhhchhhhhcCCcc
Confidence                         1227789999999999999999    9999999999985554

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.8e-38  Score=300.36  Aligned_cols=256  Identities=20%  Similarity=0.321  Sum_probs=197.8

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.+.||+|+||.||+|.+.....      .+..||||++..... .....+.+..|+.+++.++||||+++++++...
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~------~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   73 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDG------SFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRS   73 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCC------CceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence            5678899999999999998764321      123599999975432 223355677899999999999999999988653


Q ss_pred             C------eEEEEEeeccCCchhhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          162 N------FSCIVMEFCSGGDLHSLRHKQP----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       162 ~------~~~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      +      ..++++||+.+|+|.+++....    ...+++..++.++.||+.||+|||++||+||||||+||+++.++.+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~k  153 (273)
T cd05074          74 RAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVC  153 (273)
T ss_pred             CCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEE
Confidence            2      3478999999999988765321    22478999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.......                                                     .........++..
T Consensus       154 l~dfg~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~  180 (273)
T cd05074         154 VADFGLSKKIYSGD-----------------------------------------------------YYRQGCASKLPVK  180 (273)
T ss_pred             ECcccccccccCCc-----------------------------------------------------ceecCCCccCchh
Confidence            99999974321000                                                     0000112245667


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |++||.+.+..++.++|||||||++|+|++ |+.||......+....+........    +...+..+.+++.+||+.+|
T Consensus       181 ~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~p  256 (273)
T cd05074         181 WLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQ----PPDCLEDVYELMCQCWSPEP  256 (273)
T ss_pred             hcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCh
Confidence            999999988888999999999999999999 9999988776666666655432111    11233489999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      .+||+    +.+++.
T Consensus       257 ~~Rps----~~~~~~  267 (273)
T cd05074         257 KCRPS----FQHLRD  267 (273)
T ss_pred             hhCcC----HHHHHH
Confidence            99999    888875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=8.7e-40  Score=314.66  Aligned_cols=257  Identities=25%  Similarity=0.418  Sum_probs=210.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC------CCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH------PFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~nIv~  153 (451)
                      .+|.+....|.|-|++|.+|.+...+..         ||||||+....    ....=..|++||++|+.      -|+++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~---------vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclr  498 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQE---------VAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLR  498 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCe---------eEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence            5699999999999999999998766543         99999986533    33444569999999953      47999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEE
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIM  231 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~k  231 (451)
                      ++-.|...+|+|||||-+ ..+|.++++.. .+-.|....+..++.|+..||..|-.+||+|.||||+||||++. ..+|
T Consensus       499 l~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLK  577 (752)
T KOG0670|consen  499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILK  577 (752)
T ss_pred             HHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceee
Confidence            999999999999999988 88999998765 34568999999999999999999999999999999999999965 5789


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |||||.|........                                          +|               +.-+..
T Consensus       578 LCDfGSA~~~~enei------------------------------------------tP---------------YLVSRF  600 (752)
T KOG0670|consen  578 LCDFGSASFASENEI------------------------------------------TP---------------YLVSRF  600 (752)
T ss_pred             eccCccccccccccc------------------------------------------cH---------------HHHHHh
Confidence            999999853322111                                          11               133456


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCC-------------------
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS-------------------  372 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-------------------  372 (451)
                      |.|||+++|.+|+...|+||+||+||||+||+..|.+..+..++...+.....+|..+...                   
T Consensus       601 YRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~  680 (752)
T KOG0670|consen  601 YRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEV  680 (752)
T ss_pred             ccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEec
Confidence            9999999999999999999999999999999999999888888777766544444322100                   


Q ss_pred             ------------------------------cC------hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          373 ------------------------------MS------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       373 ------------------------------~~------~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                                                    ..      -.++++||.+||..||++|.|    +.++|.||||++
T Consensus       681 D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~  751 (752)
T KOG0670|consen  681 DKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE  751 (752)
T ss_pred             cccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence                                          00      016789999999999999999    999999999986

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-39  Score=315.26  Aligned_cols=249  Identities=23%  Similarity=0.347  Sum_probs=204.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ....+.++||.|.||.||.|......+..     ..-||||.++....  .+..+.|..|..+|+.++||||++++|+|.
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge-----~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~  461 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGE-----RIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCV  461 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCc-----ceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence            34556678999999999999987653211     12399999987643  334678889999999999999999999998


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +. ..+||||+++-|.|..|++.++ ..++......++.||+.||.|||+..+|||||...|||+.+..-|||+|||+++
T Consensus       462 e~-P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR  539 (974)
T KOG4257|consen  462 EQ-PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSR  539 (974)
T ss_pred             cc-ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhh
Confidence            65 5789999999999999998875 459999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ..+....-.                                                      .....-...|||||.+.
T Consensus       540 ~~ed~~yYk------------------------------------------------------aS~~kLPIKWmaPESIN  565 (974)
T KOG4257|consen  540 YLEDDAYYK------------------------------------------------------ASRGKLPIKWMAPESIN  565 (974)
T ss_pred             hccccchhh------------------------------------------------------ccccccceeecCccccc
Confidence            443221110                                                      00112345699999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      -..++.++|||.|||.|||++. |..||.+-.+.+.+..+.++. ++.|..     ++..+..|+.+||++||.+||+.
T Consensus       566 fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~n-----CPp~LYslmskcWayeP~kRPrf  639 (974)
T KOG4257|consen  566 FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPN-----CPPALYSLMSKCWAYEPSKRPRF  639 (974)
T ss_pred             hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCC-----CChHHHHHHHHHhccCcccCCcH
Confidence            8899999999999999999987 999999988888888777764 333433     33377889999999999999993

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-39  Score=322.56  Aligned_cols=274  Identities=22%  Similarity=0.291  Sum_probs=228.2

Q ss_pred             hhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHH
Q 013016           61 FAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK  140 (451)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~  140 (451)
                      +++.+-..|.......+......|.+.||.|.||.||+|+++..+++      ...||||.++..  ...++..+|..|+
T Consensus       610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkr------e~~VAIKTLK~G--ytekqrrdFL~EA  681 (996)
T KOG0196|consen  610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKR------EITVAIKTLKAG--YTEKQRRDFLSEA  681 (996)
T ss_pred             ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCc------ceeEEEeeeccC--ccHHHHhhhhhhh
Confidence            44555555554444555566788999999999999999999876532      235999999866  3456678899999


Q ss_pred             HHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       141 ~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      .||-++.||||++|.|+-.......||.|||++|+|+.+|+.+.+ .|++-++.-|++.|+.|++||-++|+|||||...
T Consensus       682 sIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAAR  760 (996)
T KOG0196|consen  682 SIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAAR  760 (996)
T ss_pred             hhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhh
Confidence            999999999999999999999999999999999999999998864 4999999999999999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                      ||||+.+..+|++|||+++.+++.+...                                                    
T Consensus       761 NILVNsnLvCKVsDFGLSRvledd~~~~----------------------------------------------------  788 (996)
T KOG0196|consen  761 NILVNSNLVCKVSDFGLSRVLEDDPEAA----------------------------------------------------  788 (996)
T ss_pred             heeeccceEEEeccccceeecccCCCcc----------------------------------------------------
Confidence            9999999999999999997654332100                                                    


Q ss_pred             cccccccc--CCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHH
Q 013016          301 ARSCSFVG--THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH  377 (451)
Q Consensus       301 ~~~~~~~g--t~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  377 (451)
                        ..+.-|  ...|.|||.|...+++.++||||+|+||||.++ |+.||.+.++.+.++.|..+..-+|.-.    .+..
T Consensus       789 --ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD----CP~a  862 (996)
T KOG0196|consen  789 --YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD----CPAA  862 (996)
T ss_pred             --ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC----CcHH
Confidence              001111  256999999999999999999999999999887 9999999999999999988754333222    2337


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +-.|+..||++|-.+||.    +.+|+.
T Consensus       863 L~qLMldCWqkdR~~RP~----F~qiV~  886 (996)
T KOG0196|consen  863 LYQLMLDCWQKDRNRRPK----FAQIVS  886 (996)
T ss_pred             HHHHHHHHHHHHhhcCCC----HHHHHH
Confidence            899999999999999999    888864

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-39  Score=318.94  Aligned_cols=246  Identities=29%  Similarity=0.463  Sum_probs=194.0

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .+...+.||+|+||.||+++++.+++         .||||.++...  .....+...+|+++|++++|+|||+++++-++
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~---------~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~   82 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGR---------LVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEET   82 (732)
T ss_pred             ceeehhhhcCCccceeeeeccccccc---------chhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCc
Confidence            46777889999999999999888876         49999999764  33445667789999999999999999987765


Q ss_pred             CC------eEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc--cCC--C
Q 013016          161 SN------FSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR--SDG--H  229 (451)
Q Consensus       161 ~~------~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~--~~~--~  229 (451)
                      ..      ...+|||||.||||...++.-. ...+++.....++.+++.||.|||++|||||||||.||++.  .+|  .
T Consensus        83 ~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~I  162 (732)
T KOG4250|consen   83 KFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSI  162 (732)
T ss_pred             cccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceE
Confidence            43      6689999999999999987643 35699999999999999999999999999999999999996  445  3


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      -||+|||.|+...+                                                        .+.-.+++||
T Consensus       163 yKLtDfG~Arel~d--------------------------------------------------------~s~~~S~vGT  186 (732)
T KOG4250|consen  163 YKLTDFGAARELDD--------------------------------------------------------NSLFTSLVGT  186 (732)
T ss_pred             EeeecccccccCCC--------------------------------------------------------CCeeeeecCc
Confidence            69999999964432                                                        1233467999


Q ss_pred             CCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCC---------------C-----
Q 013016          310 HEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPL---------------T-----  364 (451)
Q Consensus       310 ~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~---------------~-----  364 (451)
                      +.|.+||+... +.|+..+|.|||||++|+..||..||....    ..+.+..+..++.               .     
T Consensus       187 ~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~l  266 (732)
T KOG4250|consen  187 EEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTL  266 (732)
T ss_pred             hhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccC
Confidence            99999999984 788999999999999999999999996532    2334444433221               1     


Q ss_pred             -CCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          365 -FPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       365 -~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                       ++....+.+.. .+-..+..+|+++|.+|.
T Consensus       267 P~p~~Ls~~l~~-~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  267 PQPNHLSRGLAT-RLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             CCcccccHHHHh-hhhHHHHHHHhhhHHHhC
Confidence             11111111111 456889999999999999

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-38  Score=299.71  Aligned_cols=267  Identities=28%  Similarity=0.437  Sum_probs=213.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH----HHHHHHHHHHHHHHHCCCCCccce
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK----KKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .++|-++++||.|+|+.||+|.+....+         .||||+-.....+.+    ...+...+|..|.+.|.||.||++
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqR---------YvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKl  532 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQR---------YVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKL  532 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhh---------eeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeee
Confidence            3569999999999999999999877665         599998754433332    334556779999999999999999


Q ss_pred             eEEEE-eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCcEEEcc---CC
Q 013016          155 YAEFE-ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML--GIIYRDLKPENVLVRS---DG  228 (451)
Q Consensus       155 ~~~~~-~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--givH~Dlkp~NIll~~---~~  228 (451)
                      |++|. +.+.+|-|+|||+|.+|.=|++..  +.+++..++.|+-||+.||.||.+.  -|||-||||.|||+..   -|
T Consensus       533 YDyfslDtdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG  610 (775)
T KOG1151|consen  533 YDYFSLDTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG  610 (775)
T ss_pred             eeeeeeccccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence            99996 556899999999999999888876  5599999999999999999999976  4999999999999964   37


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||+++.+.....                                                ...+....+..+.|
T Consensus       611 eIKITDFGLSKIMdddSy------------------------------------------------~~vdGmeLTSQgAG  642 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSY------------------------------------------------NSVDGMELTSQGAG  642 (775)
T ss_pred             eeEeeecchhhhccCCcc------------------------------------------------CcccceeeecccCc
Confidence            899999999976543222                                                12234455567789


Q ss_pred             CCCccCcccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HH--HHhc-CCCCCCCCCCCCcChHHHHH
Q 013016          309 THEYVSPEVASGG----SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LR--NIVK-KPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       309 t~~y~aPE~~~~~----~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~--~i~~-~~~~~~~~~~~~~~~~~~~~  380 (451)
                      |.+|++||++.-+    ..+.++||||+|||+|..+.|+.||...-.... +.  .|++ ..+.+|..  +...+ ++++
T Consensus       643 TYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K--PvVss-eAka  719 (775)
T KOG1151|consen  643 TYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK--PVVSS-EAKA  719 (775)
T ss_pred             eeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC--CccCH-HHHH
Confidence            9999999997543    358899999999999999999999987544332 22  1222 23445543  22333 8999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||++||++.-++|..    +.+|..||||.-
T Consensus       720 FIRRCLaYRKeDR~D----V~qLA~dpyllP  746 (775)
T KOG1151|consen  720 FIRRCLAYRKEDRID----VQQLACDPYLLP  746 (775)
T ss_pred             HHHHHHHhhhhhhhh----HHHHccCccccc
Confidence            999999999999999    999999999986

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=305.20  Aligned_cols=249  Identities=22%  Similarity=0.318  Sum_probs=208.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+....++||-|.||.||.|.|+...-.         ||||.++.    +...+++|..|+.+|+.++|||+|+++|+|
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslT---------vAVKtLKE----DtMeveEFLkEAAvMKeikHpNLVqLLGVC  332 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLT---------VAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC  332 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeecccee---------eehhhhhh----cchhHHHHHHHHHHHHhhcCccHHHHhhhh
Confidence            34577889999999999999999977543         99999873    345678899999999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+..+|||+|||..|+|.+||.......++......|+.||..|++||..+++|||||...|+|+.++..||++|||++
T Consensus       333 T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLs  412 (1157)
T KOG4278|consen  333 THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLS  412 (1157)
T ss_pred             ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchh
Confidence            99999999999999999999999887777888999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +++...                  +||.+                                    ..---...|.|||-+
T Consensus       413 RlMtgD------------------TYTAH------------------------------------AGAKFPIKWTAPEsL  438 (1157)
T KOG4278|consen  413 RLMTGD------------------TYTAH------------------------------------AGAKFPIKWTAPESL  438 (1157)
T ss_pred             hhhcCC------------------ceecc------------------------------------cCccCcccccCcccc
Confidence            653211                  01100                                    001224569999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .-+.++.++|||+|||+|||+.| |-.||.+.+-...+..+.++.. .-|...     +..+.+|++.||+|.|.+||+ 
T Consensus       439 AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGC-----PpkVYeLMraCW~WsPsDRPs-  512 (1157)
T KOG4278|consen  439 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGC-----PPKVYELMRACWNWSPSDRPS-  512 (1157)
T ss_pred             cccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCC-----CHHHHHHHHHHhcCCcccCcc-
Confidence            99999999999999999999998 9999999877777666655532 223332     337889999999999999999 


Q ss_pred             CCChHHH
Q 013016          397 KRGAADV  403 (451)
Q Consensus       397 ~~~~~el  403 (451)
                         +.|+
T Consensus       513 ---Faei  516 (1157)
T KOG4278|consen  513 ---FAEI  516 (1157)
T ss_pred             ---HHHH
Confidence               5554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=4.2e-37  Score=319.78  Aligned_cols=268  Identities=17%  Similarity=0.232  Sum_probs=177.6

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ....++|.+.++||+|+||.||+|.+..+..     ..+..||||.+......     +....  +.++...+.++..++
T Consensus       128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~-----~~~~~vAvK~~~~~~~~-----e~~~~--e~l~~~~~~~~~~~~  195 (566)
T PLN03225        128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQS-----KKEGKYVLKKATEYGAV-----EIWMN--ERVRRACPNSCADFV  195 (566)
T ss_pred             CCccCCeEEeEEEeeCCCeEEEEEEEcCCcc-----ccCcEEEEEEecccchh-----HHHHH--HHHHhhchhhHHHHH
Confidence            3456889999999999999999999887621     11224999987643111     11111  112222233333222


Q ss_pred             EE------EEeCCeEEEEEeeccCCchhhhhhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCC
Q 013016          156 AE------FEASNFSCIVMEFCSGGDLHSLRHKQPHK------------------RFSLTSARFYAAEVLVALEYLHMLG  211 (451)
Q Consensus       156 ~~------~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~~~~i~~qil~aL~~LH~~g  211 (451)
                      ..      .......+|||||+.+++|.+++......                  ......+..++.||+.||+|||++|
T Consensus       196 ~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g  275 (566)
T PLN03225        196 YGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG  275 (566)
T ss_pred             HhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC
Confidence            22      24566899999999999999988654211                  1123456789999999999999999


Q ss_pred             CeeccCCCCcEEEcc-CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCC
Q 013016          212 IIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTP  290 (451)
Q Consensus       212 ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (451)
                      |+||||||+|||++. ++.+||+|||++......                                              
T Consensus       276 IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~----------------------------------------------  309 (566)
T PLN03225        276 IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVG----------------------------------------------  309 (566)
T ss_pred             EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccc----------------------------------------------
Confidence            999999999999996 579999999998432100                                              


Q ss_pred             CcccccccccccccccccCCCccCcccccCC----------------------CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013016          291 NRLFVAEPVAARSCSFVGTHEYVSPEVASGG----------------------SHGNAVDWWAFGIFIYEMIYGRTPFAA  348 (451)
Q Consensus       291 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DIwSlG~il~elltg~~pf~~  348 (451)
                              .......++|++.|||||.+...                      .++.++|||||||+||||+++..++..
T Consensus       310 --------~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~  381 (566)
T PLN03225        310 --------INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS  381 (566)
T ss_pred             --------cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch
Confidence                    00111235789999999976432                      234467999999999999997766432


Q ss_pred             CChHHHHHHHhcC-CCCC-------CCCCC---------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          349 PSNETTLRNIVKK-PLTF-------PTQSP---------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       349 ~~~~~~~~~i~~~-~~~~-------~~~~~---------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                        ....+..++.. ....       .....         .........+||.+||++||++|||    +.++|+||||++
T Consensus       382 --~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~  455 (566)
T PLN03225        382 --NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDR  455 (566)
T ss_pred             --HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCC
Confidence              22222222111 0000       00000         0111224568999999999999999    999999999999


Q ss_pred             CCcc
Q 013016          412 LNFA  415 (451)
Q Consensus       412 ~~~~  415 (451)
                      .+..
T Consensus       456 ~~~~  459 (566)
T PLN03225        456 EGLL  459 (566)
T ss_pred             CCcc
Confidence            6664

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-38  Score=313.70  Aligned_cols=263  Identities=20%  Similarity=0.301  Sum_probs=216.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++..+.++||+|+||.||+|.|.....      ..+-||||.++......  ....|.+|+.+|.+|+|+|+++|||+..
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psg------k~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl  181 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSG------KHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVL  181 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCC------cEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeec
Confidence            557777899999999999999986432      23459999998765432  6678999999999999999999999988


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      + ..+.||||+++.|||.+.|+......|.......++.||+.||.||..+++|||||...|||+.....|||+|||+.+
T Consensus       182 ~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmR  260 (1039)
T KOG0199|consen  182 D-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMR  260 (1039)
T ss_pred             c-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccccee
Confidence            7 678899999999999999988767779999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .+...+.                                      ...+++.              .--...|+|||.+.
T Consensus       261 aLg~ned--------------------------------------~Yvm~p~--------------rkvPfAWCaPEsLr  288 (1039)
T KOG0199|consen  261 ALGENED--------------------------------------MYVMAPQ--------------RKVPFAWCAPESLR  288 (1039)
T ss_pred             ccCCCCc--------------------------------------ceEecCC--------------CcCcccccCHhHhc
Confidence            5432111                                      0011111              12234699999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      ...++.++|||+|||+||||+| |+.||.+.....++.+|-.+.. ++.   +..++.++.++++.||.++|++|||   
T Consensus       289 h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er-LpR---Pk~csedIY~imk~cWah~paDRpt---  361 (1039)
T KOG0199|consen  289 HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER-LPR---PKYCSEDIYQIMKNCWAHNPADRPT---  361 (1039)
T ss_pred             cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc-CCC---CCCChHHHHHHHHHhccCCcccccc---
Confidence            9999999999999999999998 9999999999999998875432 222   1234458999999999999999999   


Q ss_pred             ChHHHHcCCCcCC
Q 013016          399 GAADVKTHPFFKG  411 (451)
Q Consensus       399 ~~~ell~hp~~~~  411 (451)
                       +..|...-++++
T Consensus       362 -Fsair~~~~l~e  373 (1039)
T KOG0199|consen  362 -FSAIREDLVLAE  373 (1039)
T ss_pred             -HHHHHHhHHHHh
Confidence             777765555554

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=9.1e-36  Score=277.34  Aligned_cols=243  Identities=44%  Similarity=0.692  Sum_probs=198.2

Q ss_pred             CeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEEEeec
Q 013016           92 DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFC  171 (451)
Q Consensus        92 ~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~  171 (451)
                      +||.||+|.+..+++         .+|+|++........  ...+..|++.+++++|+||+++++.+......++|||++
T Consensus         1 ~~g~v~~~~~~~~~~---------~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   69 (244)
T smart00220        1 SFGKVYLARDKKTGK---------LVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYC   69 (244)
T ss_pred             CceEEEEEEECCCCc---------EEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCC
Confidence            589999999987554         399999976533221  467778999999999999999999999999999999999


Q ss_pred             cCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCC
Q 013016          172 SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA  251 (451)
Q Consensus       172 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  251 (451)
                      ++++|.+++.....  +++..+..++.+++.+|.+||+.|++|+||+|+||+++.++.++|+|||.+.......      
T Consensus        70 ~~~~L~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------  141 (244)
T smart00220       70 DGGDLFDLLKKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------  141 (244)
T ss_pred             CCCCHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc------
Confidence            99899999877533  8999999999999999999999999999999999999999999999999975322110      


Q ss_pred             CCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHH
Q 013016          252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA  331 (451)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS  331 (451)
                                                                        ......|+..|++||.+.+..++.++||||
T Consensus       142 --------------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~s  171 (244)
T smart00220      142 --------------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWS  171 (244)
T ss_pred             --------------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHH
Confidence                                                              111236788899999998888899999999


Q ss_pred             HHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          332 FGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       332 lG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      ||+++++|++|..||.. .........+........... .. .+.++.+++.+||..+|++||+    +.++++||||
T Consensus       172 lG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~  244 (244)
T smart00220      172 LGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE-WK-ISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF  244 (244)
T ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccc-cc-CCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence            99999999999999987 444444444443333322211 00 2338999999999999999999    9999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.7e-35  Score=300.88  Aligned_cols=275  Identities=20%  Similarity=0.244  Sum_probs=188.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEecccccc-------CCCCCCcceEEEEEcchHHHHHHH-----------HHHHHH
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ-------DRGHEPCCLYAMKVVNKEVLEKKK-----------KVHRAE  137 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~-------~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~  137 (451)
                      .+..++|.+.++||+|+||+||+|.+......       ......+..||||.+.........           ..+...
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            34568899999999999999999976332210       011122345999998643211111           112234


Q ss_pred             HHHHHHHHCCCCCc-----cceeEEEEe--------CCeEEEEEeeccCCchhhhhhhCC--------------------
Q 013016          138 MEKKILKMLDHPFL-----PTLYAEFEA--------SNFSCIVMEFCSGGDLHSLRHKQP--------------------  184 (451)
Q Consensus       138 ~e~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~--------------------  184 (451)
                      .|+.++.+++|.++     ++++++|..        .+..+|||||+++++|.++++...                    
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            46777777766554     677777643        357899999999999999886421                    


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCc
Q 013016          185 --HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQ  262 (451)
Q Consensus       185 --~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~  262 (451)
                        ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.......                 
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-----------------  363 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-----------------  363 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence              1224677889999999999999999999999999999999999999999999974221000                 


Q ss_pred             ccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCC--------------------
Q 013016          263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS--------------------  322 (451)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--------------------  322 (451)
                                                           ........+++.|+|||.+....                    
T Consensus       364 -------------------------------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~  406 (507)
T PLN03224        364 -------------------------------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWL  406 (507)
T ss_pred             -------------------------------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHh
Confidence                                                 00000114578999999986432                    


Q ss_pred             CC--cchhHHHHHHHHHHHHhCCC-CCCCCChH-----------HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          323 HG--NAVDWWAFGIFIYEMIYGRT-PFAAPSNE-----------TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       323 ~~--~~~DIwSlG~il~elltg~~-pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      ++  .+.||||+|||+|+|++|.. ||......           .....+......++  ..+. .+..+++|+.+||..
T Consensus       407 yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~--~~d~-~s~~~~dLi~~LL~~  483 (507)
T PLN03224        407 YGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS--LLDR-NKEAGWDLACKLITK  483 (507)
T ss_pred             cCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc--cccc-cChHHHHHHHHHhcc
Confidence            11  24799999999999999875 77542111           11111222222222  1222 234899999999998


Q ss_pred             Cc---CCcCCCCCChHHHHcCCCcCC
Q 013016          389 DP---CNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       389 dP---~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +|   .+|+|    +.|+|+||||..
T Consensus       484 ~~~~~~~RlS----a~eaL~Hp~f~~  505 (507)
T PLN03224        484 RDQANRGRLS----VGQALSHRFFLP  505 (507)
T ss_pred             CCCCcccCCC----HHHHhCCCCcCC
Confidence            76   68999    999999999964

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-37  Score=284.20  Aligned_cols=255  Identities=27%  Similarity=0.409  Sum_probs=204.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.-+.-+|.|+- .|..|.+.-..++         ||+|..... ........+..+|..++..++|+||++++.+|.
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~---------v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ft   85 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRP---------VAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFT   85 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCc---------eehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccC
Confidence            57888889999998 7777777666554         999988766 445566777888999999999999999999995


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      -.      ...|+|||+| ..+|.+.+..    .++-..+..|+.|++.|++|||++||+||||||+||++..+..+||.
T Consensus        86 P~~~l~~~~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~  160 (369)
T KOG0665|consen   86 PQKTLEEFQEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKIL  160 (369)
T ss_pred             ccccHHHHHhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeec
Confidence            33      3689999999 7899988773    37788899999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|....                                                        ...+..-++.|+.|+
T Consensus       161 dfg~ar~e~--------------------------------------------------------~~~~mtpyVvtRyyr  184 (369)
T KOG0665|consen  161 DFGLARTED--------------------------------------------------------TDFMMTPYVVTRYYR  184 (369)
T ss_pred             cchhhcccC--------------------------------------------------------cccccCchhheeecc
Confidence            999984211                                                        011223357889999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC---------------------------C---
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---------------------------L---  363 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~---------------------------~---  363 (451)
                      |||++.|..|...+||||+||++.||++|+..|.+...-+.+.++....                           .   
T Consensus       185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~  264 (369)
T KOG0665|consen  185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS  264 (369)
T ss_pred             CchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence            9999999889999999999999999999999998754433333322200                           0   


Q ss_pred             -CCCCCCC------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcC
Q 013016          364 -TFPTQSP------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       364 -~~~~~~~------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~  410 (451)
                       .+|+...      +......+++++.+||-.||++|.+    ++++|.|||++
T Consensus       265 ~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ris----v~daL~HPY~~  314 (369)
T KOG0665|consen  265 ELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRIS----VDDALRHPYIK  314 (369)
T ss_pred             hhCCcccccccccCCccchHHHHHHHHHhhccChhhccc----HHHHhcCCeee
Confidence             1111111      1233447899999999999999999    99999999999

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.3e-36  Score=265.89  Aligned_cols=257  Identities=25%  Similarity=0.411  Sum_probs=199.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~  157 (451)
                      .++|++.+++|.|-|+.|+.|....+..+         ++||+++.-      ..+.+.+|+.||..|. ||||++++++
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK---------~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~Di  101 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEK---------CVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDI  101 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCce---------EEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhh
Confidence            37899999999999999999987666553         899998743      2355667999999996 9999999998


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEEec
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSD  234 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl~D  234 (451)
                      ..+.  ....||+||+++.+...+...     ++...++.++.+++.||.|+|++||+|||+||.|++|+.. -.++|+|
T Consensus       102 V~Dp~SktpaLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlID  176 (338)
T KOG0668|consen  102 VKDPESKTPSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLID  176 (338)
T ss_pred             hcCccccCchhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeee
Confidence            8654  578999999988877765443     7888999999999999999999999999999999999965 5799999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      +|+|.+......-                                                        +-.+.+..|--
T Consensus       177 WGLAEFYHp~~eY--------------------------------------------------------nVRVASRyfKG  200 (338)
T KOG0668|consen  177 WGLAEFYHPGKEY--------------------------------------------------------NVRVASRYFKG  200 (338)
T ss_pred             cchHhhcCCCcee--------------------------------------------------------eeeeehhhcCC
Confidence            9999654321110                                                        01145566788


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhc-------------CCCCC--------------
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVK-------------KPLTF--------------  365 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~-------------~~~~~--------------  365 (451)
                      ||++.. ..|+...|+|||||++..|+..+.||-. .++.+.+.+|..             -.+.+              
T Consensus       201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk  280 (338)
T KOG0668|consen  201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK  280 (338)
T ss_pred             chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence            999876 4589999999999999999999998754 344443333322             00000              


Q ss_pred             -----CCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          366 -----PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       366 -----~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                           .......+..+++.+|+.++|..|-.+|+|    |.|++.||||..+..+
T Consensus       281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT----akEam~HpyF~~~~~~  331 (338)
T KOG0668|consen  281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT----AKEAMAHPYFAPVREA  331 (338)
T ss_pred             cHHHhCCccccccCChHHHHHHHHHHhhccccccc----hHHHhcCchHHHHHHH
Confidence                 111112233458999999999999999999    9999999999875443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=9e-37  Score=308.97  Aligned_cols=252  Identities=29%  Similarity=0.408  Sum_probs=196.9

Q ss_pred             ceEEeeeccCCeeE-EEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEEE
Q 013016           82 FDLHRRIGAGDIGT-VYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFE  159 (451)
Q Consensus        82 y~~~~~LG~G~~g~-Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~~  159 (451)
                      |.-.+.+|.|+.|+ ||+|...+.           .||||.+-...      .....+|+..|+.. .|||||++|+.-.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R-----------~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~  573 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGR-----------EVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQ  573 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCc-----------eehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeecc
Confidence            44456689999886 799987654           39999886442      34556799999887 5999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhC-CC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CC--CEEE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQ-PH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DG--HIML  232 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~-~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~--~~kl  232 (451)
                      +..++||+.|+| ..+|.+++... .. ........+.++.|++.||++||+.+||||||||+||||+.   ++  +++|
T Consensus       574 d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~i  652 (903)
T KOG1027|consen  574 DRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKI  652 (903)
T ss_pred             CCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEe
Confidence            999999999999 89999999874 11 11122455788999999999999999999999999999986   34  7899


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      .|||+|+.....                                                    ...-.+.....||-+|
T Consensus       653 SDfglsKkl~~~----------------------------------------------------~sS~~r~s~~sGt~GW  680 (903)
T KOG1027|consen  653 SDFGLSKKLAGG----------------------------------------------------KSSFSRLSGGSGTSGW  680 (903)
T ss_pred             cccccccccCCC----------------------------------------------------cchhhcccCCCCcccc
Confidence            999999744321                                                    1111223345799999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +|||++....-+.++||||||||+|+.++| .-||...  .+.-.+|+.+........+.. .. ++.+||.+||++||.
T Consensus       681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~~~~~L~~L~~~~-d~-eA~dLI~~ml~~dP~  756 (903)
T KOG1027|consen  681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILTGNYTLVHLEPLP-DC-EAKDLISRMLNPDPQ  756 (903)
T ss_pred             cCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhcCccceeeeccCc-hH-HHHHHHHHhcCCCcc
Confidence            999999998888899999999999999995 9999864  333346666655443322221 11 799999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCC
Q 013016          392 NRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .||+    |.+||.||||=.
T Consensus       757 ~RPs----a~~VL~HPlFW~  772 (903)
T KOG1027|consen  757 LRPS----ATDVLNHPLFWD  772 (903)
T ss_pred             cCCC----HHHHhCCCccCC
Confidence            9999    999999999955

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-37  Score=273.32  Aligned_cols=264  Identities=24%  Similarity=0.369  Sum_probs=206.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+.+..+-||.|+||.||-+++..+++.         ||+|.+..- ..+-...+++.+|+++|.-++|.|++..++...
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrr---------valkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQ  122 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKR---------VALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQ  122 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccc---------hhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcC
Confidence            5577788899999999999998877765         999988643 234445667788999999999999999998876


Q ss_pred             eCC-----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 ASN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      -..     .+|+|+|++ -.+|.+++-.  ...++...++-++.||++||+|||+.||.||||||.|+|++++..+||||
T Consensus       123 Pph~dfFqEiYV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICD  199 (449)
T KOG0664|consen  123 PANPSFFQELYVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICD  199 (449)
T ss_pred             CCCchHHHHHHHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecc
Confidence            443     578999998 6678777655  35699999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+++..+...                                                      ......-+-|..|+|
T Consensus       200 FGLARvee~d~------------------------------------------------------~~hMTqEVVTQYYRA  225 (449)
T KOG0664|consen  200 FGLARTWDQRD------------------------------------------------------RLNMTHEVVTQYYRA  225 (449)
T ss_pred             cccccccchhh------------------------------------------------------hhhhHHHHHHHHhcc
Confidence            99985321100                                                      000111255778999


Q ss_pred             cccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-----------------------CCCCCCCC--
Q 013016          315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------------------KPLTFPTQ--  368 (451)
Q Consensus       315 PE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~-----------------------~~~~~~~~--  368 (451)
                      ||++.|.. |+.++||||+|||+.||+..+..|...+..+.+..|..                       +....|..  
T Consensus       226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v  305 (449)
T KOG0664|consen  226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR  305 (449)
T ss_pred             HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc
Confidence            99999965 89999999999999999999999988776655444432                       21111110  


Q ss_pred             ----CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          369 ----SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       369 ----~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                          ..+..-..+...++..+|.+||.+|.+    ..+.+.|+++.+..+
T Consensus       306 LYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  306 LYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEEALQHRYLEEGRL  351 (449)
T ss_pred             eeeecCCcccchHHHHHHHHHhCCCCccccc----Hhhhcccccccccce
Confidence                011122336789999999999999999    999999999998665

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=6.1e-35  Score=325.30  Aligned_cols=240  Identities=19%  Similarity=0.239  Sum_probs=182.2

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|...+.||+|+||.||+|.++..+.         .||||.+.....       ....|++++++++|||||++++++.+
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~  754 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGM---------QFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRS  754 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCc---------EEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEc
Confidence            45667789999999999999876554         399999864321       11236888999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH---MLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      .+..|+||||+++|+|.++++.     +++..+..|+.||+.||+|||   +.+|+||||||+||+++.++..++. ||.
T Consensus       755 ~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~  828 (968)
T PLN00113        755 EKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL  828 (968)
T ss_pred             CCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence            9999999999999999999853     789999999999999999999   6799999999999999998888775 554


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      .....                                                           ......||..|||||+
T Consensus       829 ~~~~~-----------------------------------------------------------~~~~~~~t~~y~aPE~  849 (968)
T PLN00113        829 PGLLC-----------------------------------------------------------TDTKCFISSAYVAPET  849 (968)
T ss_pred             ccccc-----------------------------------------------------------cCCCccccccccCccc
Confidence            31100                                                           0001257889999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCC-------CCCCCC-CCCCcChHHHHHHHHH
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-----ETTLRNIVKKP-------LTFPTQ-SPSSMSEYHARDLISG  384 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~-----~~~~~~i~~~~-------~~~~~~-~~~~~~~~~~~~ll~~  384 (451)
                      +.+..++.++|||||||++|||+||+.||.....     .+.........       ...... ........++.+++.+
T Consensus       850 ~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  929 (968)
T PLN00113        850 RETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALH  929 (968)
T ss_pred             ccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHh
Confidence            9998999999999999999999999999854211     11111111000       000000 0000111256789999


Q ss_pred             hcccCcCCcCCCCCChHHHHc
Q 013016          385 LLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ||+.||++||+    +.|+++
T Consensus       930 Cl~~~P~~RPt----~~evl~  946 (968)
T PLN00113        930 CTATDPTARPC----ANDVLK  946 (968)
T ss_pred             hCcCCchhCcC----HHHHHH
Confidence            99999999999    888875

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-34  Score=272.51  Aligned_cols=247  Identities=23%  Similarity=0.322  Sum_probs=184.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++..+.+.||+|.||.||+|.|++..           ||||++...    ++.....+.|+-.-..|+|+||+.+++.-.
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe~-----------VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~  275 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGED-----------VAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADN  275 (513)
T ss_pred             heeEEEEEecCccccceeeccccCCc-----------eEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccc
Confidence            67899999999999999999999875           999999754    222222233443344679999999998876


Q ss_pred             eCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----C---CCeeccCCCCcEEEccC
Q 013016          160 ASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-----L---GIIYRDLKPENVLVRSD  227 (451)
Q Consensus       160 ~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-----~---givH~Dlkp~NIll~~~  227 (451)
                      .++    .++||++|.+.|||+|||.+.   .++.....+++..++.||+|||.     +   .|.|||||..||||..+
T Consensus       276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn  352 (513)
T KOG2052|consen  276 KDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  352 (513)
T ss_pred             cCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence            543    789999999999999999883   48999999999999999999995     2   49999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      |..-|+|+|+|......-                                      ..             .....+..+
T Consensus       353 ~~C~IADLGLAv~h~~~t--------------------------------------~~-------------idi~~N~rV  381 (513)
T KOG2052|consen  353 GTCCIADLGLAVRHDSDT--------------------------------------DT-------------IDIPPNPRV  381 (513)
T ss_pred             CcEEEeeceeeEEecccC--------------------------------------Cc-------------ccCCCCCcc
Confidence            999999999985322110                                      01             111122349


Q ss_pred             cCCCccCcccccCCC----C--CcchhHHHHHHHHHHHHhC----------CCCCCC----CChHHHHHHHhcCC---CC
Q 013016          308 GTHEYVSPEVASGGS----H--GNAVDWWAFGIFIYEMIYG----------RTPFAA----PSNETTLRNIVKKP---LT  364 (451)
Q Consensus       308 gt~~y~aPE~~~~~~----~--~~~~DIwSlG~il~elltg----------~~pf~~----~~~~~~~~~i~~~~---~~  364 (451)
                      ||..|||||++....    +  -..+||||||+|+||+.-+          +.||.+    ....+.+.+++...   +.
T Consensus       382 GTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~  461 (513)
T KOG2052|consen  382 GTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPN  461 (513)
T ss_pred             ceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCC
Confidence            999999999986532    2  2469999999999998753          567754    33455555555433   22


Q ss_pred             CCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       365 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +|..+.....-..+.++++.||..||.-|.|
T Consensus       462 ipnrW~s~~~l~~m~klMkeCW~~Np~aRlt  492 (513)
T KOG2052|consen  462 IPNRWKSDPALRVMAKLMKECWYANPAARLT  492 (513)
T ss_pred             CCcccccCHHHHHHHHHHHHhhcCCchhhhH
Confidence            2322222111125678999999999999999

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=287.80  Aligned_cols=202  Identities=29%  Similarity=0.492  Sum_probs=174.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHH-----HHHHHHHHHHHHHCC---CC
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK-----VHRAEMEKKILKMLD---HP  149 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~---h~  149 (451)
                      .+.+|...+.||+|+||.||+|.++.+...         |+||.|.+++...+..     .-.+-.|++||..++   |+
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~e---------VViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~  629 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYE---------VVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHE  629 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceE---------EEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCcc
Confidence            456799999999999999999999887543         9999999887654332     233556999999997   99


Q ss_pred             CccceeEEEEeCCeEEEEEeec-cCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          150 FLPTLYAEFEASNFSCIVMEFC-SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       150 nIv~l~~~~~~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      ||++++++|++++++||+||-- +|.+|.+++...  ..+++..++-|++|++.|+++||+.||||||||-+|+.++.+|
T Consensus       630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g  707 (772)
T KOG1152|consen  630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG  707 (772)
T ss_pred             chhhhhheeecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence            9999999999999999999975 556888999876  4599999999999999999999999999999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      -+||+|||.+....                                                         ..-...|+|
T Consensus       708 ~~klidfgsaa~~k---------------------------------------------------------sgpfd~f~g  730 (772)
T KOG1152|consen  708 FVKLIDFGSAAYTK---------------------------------------------------------SGPFDVFVG  730 (772)
T ss_pred             eEEEeeccchhhhc---------------------------------------------------------CCCcceeee
Confidence            99999999873211                                                         111124799


Q ss_pred             CCCccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCC
Q 013016          309 THEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFA  347 (451)
Q Consensus       309 t~~y~aPE~~~~~~~-~~~~DIwSlG~il~elltg~~pf~  347 (451)
                      |..|.|||++.|..| +..-|||++|++||.++..+.||.
T Consensus       731 tv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  731 TVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            999999999999888 889999999999999999999985

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=277.43  Aligned_cols=246  Identities=26%  Similarity=0.335  Sum_probs=188.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH--CCCCCcccee
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM--LDHPFLPTLY  155 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~nIv~l~  155 (451)
                      .....++..+||+|.||.||+|.+++.           +||||++..+.      .+.+..|..|.+.  ++|+||++++
T Consensus       208 ~l~pl~l~eli~~Grfg~V~KaqL~~~-----------~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi  270 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQLDNR-----------LVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFI  270 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhhccCc-----------eeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhh
Confidence            345677888999999999999998874           49999998542      2344456666654  5899999999


Q ss_pred             EEEEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCCeeccCCCCcE
Q 013016          156 AEFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM---------LGIIYRDLKPENV  222 (451)
Q Consensus       156 ~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------~givH~Dlkp~NI  222 (451)
                      ++-+...    .++||+||.+.|+|.+||..+   .++|....+|+..|++||+|||+         ..|+|||||..||
T Consensus       271 ~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNV  347 (534)
T KOG3653|consen  271 GAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNV  347 (534)
T ss_pred             chhccCCccccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccce
Confidence            9887655    899999999999999999874   48999999999999999999996         3599999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      ||-.|++.-|+|||+|..+....                                                    .... 
T Consensus       348 LvK~DlTccIaDFGLAl~~~p~~----------------------------------------------------~~~d-  374 (534)
T KOG3653|consen  348 LVKNDLTCCIADFGLALRLEPGK----------------------------------------------------PQGD-  374 (534)
T ss_pred             EEccCCcEEeeccceeEEecCCC----------------------------------------------------CCcc-
Confidence            99999999999999996443110                                                    0111 


Q ss_pred             ccccccCCCccCcccccCCCC------CcchhHHHHHHHHHHHHhCCCCC------------C-----CCChHHHHHHHh
Q 013016          303 SCSFVGTHEYVSPEVASGGSH------GNAVDWWAFGIFIYEMIYGRTPF------------A-----APSNETTLRNIV  359 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~------~~~~DIwSlG~il~elltg~~pf------------~-----~~~~~~~~~~i~  359 (451)
                      +-.-+||..|||||++.|..-      -.+.||||+|.|||||+++...+            .     .+.-+++-..++
T Consensus       375 ~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV  454 (534)
T KOG3653|consen  375 THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVV  454 (534)
T ss_pred             hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHH
Confidence            111389999999999987542      23689999999999999865443            2     122333433444


Q ss_pred             cC--CCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          360 KK--PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       360 ~~--~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.  .+.++..+-.-..-.-+++.+..||.+|++.|.|+
T Consensus       455 ~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA  493 (534)
T KOG3653|consen  455 RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTA  493 (534)
T ss_pred             hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhh
Confidence            33  34455544443334467899999999999999994

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=3.3e-35  Score=278.20  Aligned_cols=302  Identities=23%  Similarity=0.335  Sum_probs=211.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +.|.++++||+|+|++||++.+....      .....||+|.+....     ...++..|+++|..+ .+.||+++.+++
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~------~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~  104 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQD------TKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCF  104 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhc------cccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhh
Confidence            67999999999999999999987620      011259999997542     335577799999998 599999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl~Dfg~  237 (451)
                      ..++..++|+||+++..-.+++..     ++...++.+++.++.||.++|.+|||||||||+|+|++.. +.-.|+|||+
T Consensus       105 rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  105 RNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             ccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechh
Confidence            999999999999999988888766     6789999999999999999999999999999999999854 6789999999


Q ss_pred             ccccCCCCCCCCCCC--CCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccc--cccccccccccccCCCcc
Q 013016          238 SLCSNAIPAVESPAS--SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV--AEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       238 a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gt~~y~  313 (451)
                      |.....-........  .+.....               ...............++..+.  .+..........||++|+
T Consensus       180 A~~~d~~~~~~~s~~~~~~~~~~~---------------~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfR  244 (418)
T KOG1167|consen  180 AQRYDGYQQTEHSRSYSGRHATPA---------------MGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFR  244 (418)
T ss_pred             HHHHHhhhhhhhhhhhhcccCCcc---------------ccCcccccccccccCCCCceeccCCCccceecccCCCCCCC
Confidence            963111110000000  0000000               000000000011111222222  234444555678999999


Q ss_pred             CcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhc--------------CC--C------------
Q 013016          314 SPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVK--------------KP--L------------  363 (451)
Q Consensus       314 aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~--------------~~--~------------  363 (451)
                      |||++...+ .+.++||||.|+|+.-+++++.||-...++ +.+.++..              +.  +            
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~  324 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPEL  324 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHH
Confidence            999998755 689999999999999999999998543221 11111110              11  0            


Q ss_pred             -----C-------------CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          364 -----T-------------FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       364 -----~-------------~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                           .             .....+.+..+..+.+|+.+||+.||.+|.|    ++++|+||||.+.+...
T Consensus       325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~~~~  391 (418)
T KOG1167|consen  325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEADRTE  391 (418)
T ss_pred             HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchhhhh
Confidence                 0             0111122233336789999999999999999    99999999999865543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=292.90  Aligned_cols=259  Identities=29%  Similarity=0.450  Sum_probs=222.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.++.++|.|+||.||+|+++.+.+         +.|+|+++...   ...+.-++.|+-+++..+|+|||.+++.+.
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~e---------laavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsyl   82 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGE---------LAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYL   82 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCc---------hhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhh
Confidence            689999999999999999999987765         69999998653   234455666999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+.++++||||.||+|.+..+-.  +++++.++..+++..+.||+|||+.|=+|||||-.|||+++.|.+|++|||.+-
T Consensus        83 r~dklwicMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsa  160 (829)
T KOG0576|consen   83 RRDKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSA  160 (829)
T ss_pred             hhcCcEEEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchh
Confidence            999999999999999999987664  679999999999999999999999999999999999999999999999999862


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc-
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-  318 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-  318 (451)
                      ...                                                       ....+..++.||+.|||||+. 
T Consensus       161 qit-------------------------------------------------------ati~KrksfiGtpywmapEvaa  185 (829)
T KOG0576|consen  161 QIT-------------------------------------------------------ATIAKRKSFIGTPYWMAPEVAA  185 (829)
T ss_pred             hhh-------------------------------------------------------hhhhhhhcccCCccccchhHHH
Confidence            111                                                       012334467999999999985 


Q ss_pred             --cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 --SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 --~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                        ..+.|...+|||++|+...|+-.-++|.........+..+-...+..|.......+...+.+|++.+|.++|.+||+ 
T Consensus       186 verkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt-  264 (829)
T KOG0576|consen  186 VERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT-  264 (829)
T ss_pred             HHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC-
Confidence              34578999999999999999999999988877777766666666666655555555658999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         ++.+|.|||..+
T Consensus       265 ---aeklL~h~fvs~  276 (829)
T KOG0576|consen  265 ---AEKLLQHPFVSQ  276 (829)
T ss_pred             ---hhhheeceeecc
Confidence               999999999988

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=289.80  Aligned_cols=252  Identities=19%  Similarity=0.210  Sum_probs=205.3

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      .+..++||+|+||+||+|.|-..++.     ....||+|++...  ...+....+..|+-+|.++.|||++++++++...
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~-----vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s  770 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGEN-----VKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLS  770 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCce-----ecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc
Confidence            45567899999999999999765432     2235999999765  3345567788899999999999999999999877


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      . +.||++|+++|.|.++++..+ ..+-......|..||++||.|||++++|||||-..||||.....+|++|||+++..
T Consensus       771 ~-~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll  848 (1177)
T KOG1025|consen  771 T-LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLL  848 (1177)
T ss_pred             h-HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence            6 889999999999999998864 45889999999999999999999999999999999999999999999999999654


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      .....                                                     .-......-.+.|||=|.+...
T Consensus       849 ~~d~~-----------------------------------------------------ey~~~~gK~pikwmale~i~~~  875 (1177)
T KOG1025|consen  849 APDEK-----------------------------------------------------EYSAPGGKVPIKWMALESIRIR  875 (1177)
T ss_pred             Ccccc-----------------------------------------------------cccccccccCcHHHHHHHhhcc
Confidence            32110                                                     0000011223569999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          322 SHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      .|+.++|||||||++||++| |..|+.+...+++-..+..+.. ++   .+.+.+.++..++.+||..|+..||+    +
T Consensus       876 ~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-Ls---qPpiCtiDVy~~mvkCwmid~~~rp~----f  947 (1177)
T KOG1025|consen  876 KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LS---QPPICTIDVYMVMVKCWMIDADSRPT----F  947 (1177)
T ss_pred             CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CC---CCCCccHHHHHHHHHHhccCcccCcc----H
Confidence            99999999999999999999 9999999988887666655533 22   23445568999999999999999999    5


Q ss_pred             HHH
Q 013016          401 ADV  403 (451)
Q Consensus       401 ~el  403 (451)
                      +++
T Consensus       948 kel  950 (1177)
T KOG1025|consen  948 KEL  950 (1177)
T ss_pred             HHH
Confidence            554

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-33  Score=293.54  Aligned_cols=262  Identities=21%  Similarity=0.327  Sum_probs=205.8

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      .+..++..+.+.||+|.||.||+|..+......  ......||||........  .....+..|+++|+.+ .|+||+.+
T Consensus       292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~--~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l  367 (609)
T KOG0200|consen  292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKAL--LSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL  367 (609)
T ss_pred             eechhhccccceeecccccceEeEEEeeccccc--ccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence            333355667779999999999999877544321  122345999999866433  5567788899999998 59999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC------C--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP------H--------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~------~--------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      +|++...+.+++|+||+..|+|.+++...+      .        ..++..+...++.||+.|++||++..+|||||-..
T Consensus       368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR  447 (609)
T KOG0200|consen  368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR  447 (609)
T ss_pred             eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence            999999999999999999999999998765      0        13889999999999999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                      |||+..+..+||+|||+|+.......-..                                                   
T Consensus       448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~---------------------------------------------------  476 (609)
T KOG0200|consen  448 NVLITKNKVIKIADFGLARDHYNKDYYRT---------------------------------------------------  476 (609)
T ss_pred             hEEecCCCEEEEccccceeccCCCCceEe---------------------------------------------------
Confidence            99999999999999999853221111000                                                   


Q ss_pred             cccccccc--CCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC-hHHHHHHHhcCCC-CCCCCCCCCcCh
Q 013016          301 ARSCSFVG--THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPS-NETTLRNIVKKPL-TFPTQSPSSMSE  375 (451)
Q Consensus       301 ~~~~~~~g--t~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~-~~~~~~~i~~~~~-~~~~~~~~~~~~  375 (451)
                       +.  -.|  ...|||||.+....|+.++||||||++|||++| |..||.+.. ..+.+..+..+.. ..|..     ..
T Consensus       477 -~~--~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~-----c~  548 (609)
T KOG0200|consen  477 -KS--SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEH-----CS  548 (609)
T ss_pred             -cC--CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCC-----CC
Confidence             00  011  234999999999899999999999999999999 999999855 5555555555543 33332     23


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      .++.++++.|++.+|++||+    +.++.
T Consensus       549 ~eiY~iM~~CW~~~p~~RP~----F~~~~  573 (609)
T KOG0200|consen  549 DEIYDLMKSCWNADPEDRPT----FSECV  573 (609)
T ss_pred             HHHHHHHHHHhCCCcccCCC----HHHHH
Confidence            48889999999999999999    55554

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=263.45  Aligned_cols=258  Identities=16%  Similarity=0.176  Sum_probs=207.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .++++...+-+|.||.||+|.|.+....    ..++-|-+|.+...  ....++..+..|.-.+..+.|+|+..+.+++.
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~----n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~i  357 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTY----NDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSI  357 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCc----chHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence            6788899999999999999988755432    22233666766544  45567788888999999999999999999885


Q ss_pred             -eCCeEEEEEeeccCCchhhhhhhCC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          160 -ASNFSCIVMEFCSGGDLHSLRHKQP------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       160 -~~~~~~lV~E~~~ggsL~~~l~~~~------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                       +....++++.++.-|+|..++...+      ...++..+...++.|++.|++|||..|+||.||...|++|++.-++||
T Consensus       358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence             4568899999999999999988432      233678888999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|=.+++-+-.                                                     .+.......-.....|
T Consensus       438 tDsaLSRDLFP-----------------------------------------------------~DYhcLGDnEnRPvkW  464 (563)
T KOG1024|consen  438 TDSALSRDLFP-----------------------------------------------------GDYHCLGDNENRPVKW  464 (563)
T ss_pred             ccchhccccCc-----------------------------------------------------ccccccCCCCCCcccc
Confidence            99888743211                                                     1111111112345679


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |+||.+.+..|+.++||||||++||||+| |+.|+...+..++...+..+..--..    ...++++..++..||..+|+
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP----~NCPDeLf~vMacCWallpe  540 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP----FNCPDELFTVMACCWALLPE  540 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCC----CCCcHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999999 99999999999998888887532221    22445999999999999999


Q ss_pred             CcCCCCCChHHHH
Q 013016          392 NRLGSKRGAADVK  404 (451)
Q Consensus       392 ~Rpt~~~~~~ell  404 (451)
                      +||+    .+++.
T Consensus       541 eRPs----f~Qlv  549 (563)
T KOG1024|consen  541 ERPS----FSQLV  549 (563)
T ss_pred             cCCC----HHHHH
Confidence            9999    88765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-34  Score=247.85  Aligned_cols=216  Identities=26%  Similarity=0.354  Sum_probs=176.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++...+..||.|+||.|=+.++..++.         +.|+|.+....  +.+..++..+|+.+..+. .+|.+|++||..
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~---------imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~  114 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGT---------IMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL  114 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCe---------EEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhh
Confidence            556677889999999999888877665         69999998664  344456667788776665 699999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ..++..++.||.| ..||..+....  .++.+++..+-+|+..+++||.|||+ ..++|||+||+|||++.+|++|+|||
T Consensus       115 ~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDF  193 (282)
T KOG0984|consen  115 FREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDF  193 (282)
T ss_pred             hccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccc
Confidence            9999999999999 78888876542  35679999999999999999999995 58999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++-.+.+.-++                                                      +.  -.|...||||
T Consensus       194 GIsG~L~dSiAk------------------------------------------------------t~--daGCkpYmaP  217 (282)
T KOG0984|consen  194 GISGYLVDSIAK------------------------------------------------------TM--DAGCKPYMAP  217 (282)
T ss_pred             ccceeehhhhHH------------------------------------------------------HH--hcCCCccCCh
Confidence            997432211110                                                      00  1577889999


Q ss_pred             ccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCC
Q 013016          316 EVASG----GSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPL  363 (451)
Q Consensus       316 E~~~~----~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~  363 (451)
                      |.+..    ..|+.++||||||+.++||.+++.||.. ....+.+.+++....
T Consensus       218 Eri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~  270 (282)
T KOG0984|consen  218 ERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPS  270 (282)
T ss_pred             hhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCC
Confidence            99854    3689999999999999999999999987 456777888877643

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=3.1e-30  Score=234.03  Aligned_cols=213  Identities=37%  Similarity=0.591  Sum_probs=180.8

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV  167 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV  167 (451)
                      ||.|++|.||+|....+++         .+++|++.......  ....+.+|+.+++.+.|++|+++++++......+++
T Consensus         1 l~~g~~~~v~~~~~~~~~~---------~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~   69 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGK---------KVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLV   69 (215)
T ss_pred             CCcCCceEEEEEEecCCCc---------EEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEE
Confidence            6899999999999876444         39999998653321  345677899999999999999999999999999999


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccCcccccCCCCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~  246 (451)
                      ||++.|++|.+++.... ..+++..+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus        70 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~  148 (215)
T cd00180          70 MEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS  148 (215)
T ss_pred             EecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence            99999899999987642 35899999999999999999999999999999999999999 89999999999743211100


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC-CCCc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-SHGN  325 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~  325 (451)
                                                                             ......+...|++||.+... .++.
T Consensus       149 -------------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~  173 (215)
T cd00180         149 -------------------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSE  173 (215)
T ss_pred             -------------------------------------------------------hhhcccCCCCccChhHhcccCCCCc
Confidence                                                                   01112567789999999876 7789


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       326 ~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.|+|++|+++++|                                    ..+.+++.+|++.||.+||+    +.++++
T Consensus       174 ~~D~~~lg~~~~~l------------------------------------~~~~~~l~~~l~~~p~~R~~----~~~l~~  213 (215)
T cd00180         174 KSDIWSLGVILYEL------------------------------------PELKDLIRKMLQKDPEKRPS----AKEILE  213 (215)
T ss_pred             hhhhHHHHHHHHHH------------------------------------HHHHHHHHHHhhCCcccCcC----HHHHhh
Confidence            99999999999999                                    28899999999999999999    999998


Q ss_pred             CC
Q 013016          406 HP  407 (451)
Q Consensus       406 hp  407 (451)
                      |+
T Consensus       214 ~~  215 (215)
T cd00180         214 HL  215 (215)
T ss_pred             CC
Confidence            75

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=1.1e-31  Score=292.22  Aligned_cols=230  Identities=15%  Similarity=0.204  Sum_probs=157.1

Q ss_pred             HCCC-CCccceeEEE-------EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 013016          145 MLDH-PFLPTLYAEF-------EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD  216 (451)
Q Consensus       145 ~l~h-~nIv~l~~~~-------~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~D  216 (451)
                      .+.| .||+.++++|       .....++++||++ +++|.+++... ...+++..++.++.||+.||+|||++||+|||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            3455 5788888877       2334678889988 78999999754 35599999999999999999999999999999


Q ss_pred             CCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccc------cCC
Q 013016          217 LKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQT------LTP  290 (451)
Q Consensus       217 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  290 (451)
                      |||+||||+..|.+|++|||++...........                     .+.     .||......      .+.
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~---------------------ki~-----DfG~a~~~~~~~~~~~~~  159 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATT---------------------KSR-----EIGSSRREEILSERRIEK  159 (793)
T ss_pred             CCchhEEEcccCcEEEeeccccCcccccccCcc---------------------ccc-----ccccccccccccccchhh
Confidence            999999999989999999988753221100000                     000     011000000      000


Q ss_pred             CcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC
Q 013016          291 NRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP  370 (451)
Q Consensus       291 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  370 (451)
                      ................+||+.|||||++.+..|+.++|||||||+||||++|..|+....  ..+..+.....  +....
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~~  235 (793)
T PLN00181        160 LEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQIL  235 (793)
T ss_pred             hhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chhhh
Confidence            000000001111123479999999999999999999999999999999999998876422  22222222211  11110


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      . .. ....+++.+||++||.+||+    +.|+|+||||.+.
T Consensus       236 ~-~~-~~~~~~~~~~L~~~P~~Rps----~~eil~h~~~~~~  271 (793)
T PLN00181        236 L-NW-PKEASFCLWLLHPEPSCRPS----MSELLQSEFINEP  271 (793)
T ss_pred             h-cC-HHHHHHHHHhCCCChhhCcC----hHHHhhchhhhhh
Confidence            1 11 25678999999999999999    9999999999873

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=1.3e-29  Score=233.57  Aligned_cols=215  Identities=40%  Similarity=0.622  Sum_probs=176.9

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |.+.+.||.|++|.||+|....+.+         .+|+|.+......  .....+..|++.+++++|+|++++++++...
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~---------~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   69 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGE---------LVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDP   69 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCc---------EEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecC
Confidence            5678899999999999999887544         3999999865332  2456777799999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ...++++|++.+++|.+++...... +++..+..++.+++.+|.+||+++++|+||+|.||+++.++.++|+|||.+...
T Consensus        70 ~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~  148 (225)
T smart00221       70 EPLYLVMEYCEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFI  148 (225)
T ss_pred             CceEEEEeccCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEe
Confidence            9999999999999999998875322 889999999999999999999999999999999999999999999999997533


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc-cC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-SG  320 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~  320 (451)
                      ....                                                      ........++..|++||.+ ..
T Consensus       149 ~~~~------------------------------------------------------~~~~~~~~~~~~~~~pe~~~~~  174 (225)
T smart00221      149 HRDL------------------------------------------------------AALLKTVKGTPFYLAPEVLLGG  174 (225)
T ss_pred             cCcc------------------------------------------------------cccccceeccCCcCCHhHhcCC
Confidence            2110                                                      0011123577789999998 55


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCC-CChH-HHHHHHhcCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNE-TTLRNIVKKP  362 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~-~~~~~i~~~~  362 (451)
                      ..++.++|||+||+++++|++|+.||.. .... .+.+.+..+.
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            6678899999999999999999999987 4444 5555565554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=240.08  Aligned_cols=251  Identities=21%  Similarity=0.314  Sum_probs=187.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeE-E
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYA-E  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~-~  157 (451)
                      +.|.|.+.||+|.||.+.+|.++.+...         +++|.+.+...    ...+|.+|...--.| .|.||+..|+ .
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~---------ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~va   90 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTR---------IVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVA   90 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceE---------EEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHH
Confidence            6799999999999999999999988764         99999986643    345566666554444 5899998886 6


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--CCCEEEecc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDF  235 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~Df  235 (451)
                      |+..+.+++++||++.|+|..-+..   ..+.+...+.++.|++.||.|||++++||||||.+||||..  ..++|||||
T Consensus        91 Fqt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDF  167 (378)
T KOG1345|consen   91 FQTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDF  167 (378)
T ss_pred             hhcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeec
Confidence            7788899999999999999875544   45889999999999999999999999999999999999963  348999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                            ..                              ...-+-.|.+|
T Consensus       168 G~t~k~g~t----------------------------V~------------------------------~~~~~~~y~~p  189 (378)
T KOG1345|consen  168 GLTRKVGTT----------------------------VK------------------------------YLEYVNNYHAP  189 (378)
T ss_pred             ccccccCce----------------------------eh------------------------------hhhhhcccCCc
Confidence            997321100                            00                              01223459999


Q ss_pred             ccccCC---C--CCcchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCC-CCCCCCCCCCcChHHHHHHHHHh
Q 013016          316 EVASGG---S--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKP-LTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       316 E~~~~~---~--~~~~~DIwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~-~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      |+....   .  .....|||.||+|+|.+|||+.||......    -.+.++..+. ...|...  ...+..+..+.++-
T Consensus       190 e~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F--~~fs~~a~r~Fkk~  267 (378)
T KOG1345|consen  190 ELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF--NPFSEKALRLFKKS  267 (378)
T ss_pred             HHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh--cccCHHHHHHHHHh
Confidence            987542   2  367899999999999999999999864322    2334444443 3333322  22344889999999


Q ss_pred             cccCcCCc---CCCCCChHHHHcCCCcC
Q 013016          386 LNKDPCNR---LGSKRGAADVKTHPFFK  410 (451)
Q Consensus       386 L~~dP~~R---pt~~~~~~ell~hp~~~  410 (451)
                      |++++++|   .+    +....+.-|..
T Consensus       268 lt~~~~drcki~~----~kk~rk~~w~E  291 (378)
T KOG1345|consen  268 LTPRFKDRCKIWT----AKKMRKCLWKE  291 (378)
T ss_pred             cCCcccccchhHH----HHHHHHHHHHH
Confidence            99999999   45    55555555543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-30  Score=258.95  Aligned_cols=273  Identities=37%  Similarity=0.662  Sum_probs=226.4

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEEeCCeEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFEASNFSCI  166 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~~~~~~l  166 (451)
                      +|.|+||.|++++...      +...+..+|+|+..+......... ....|..++...+ ||.+|++.-.++.++..++
T Consensus         2 lg~g~~gkvfLvrk~~------g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l   74 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAG------GADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYL   74 (612)
T ss_pred             CCcCCCcchHHHHHhc------cccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhH
Confidence            7999999999886433      234455799999988765544443 4445777888886 9999999999999999999


Q ss_pred             EEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCC
Q 013016          167 VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA  246 (451)
Q Consensus       167 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  246 (451)
                      ++++..||.|...+...  ..+.+.....+...++.|++++|+.|++|||+|++||+++.+|.+++.|||+++..-.   
T Consensus        75 ~ld~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~---  149 (612)
T KOG0603|consen   75 ILDFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK---  149 (612)
T ss_pred             hhhhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh---
Confidence            99999999987665543  5588899999999999999999999999999999999999999999999999853210   


Q ss_pred             CCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcc
Q 013016          247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA  326 (451)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  326 (451)
                                                                        ..      .-|||..|||||++.  ....+
T Consensus       150 --------------------------------------------------~~------~~cgt~eymApEI~~--gh~~a  171 (612)
T KOG0603|consen  150 --------------------------------------------------EK------IACGTYEYRAPEIIN--GHLSA  171 (612)
T ss_pred             --------------------------------------------------hh------hcccchhhhhhHhhh--ccCCc
Confidence                                                              00      018999999999998  46789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-CCChHHHHc
Q 013016          327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKT  405 (451)
Q Consensus       327 ~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~~~~~ell~  405 (451)
                      +|.||||++++||+||..||..    +.+..|....+..|...+.     .+++++..++..+|.+|... .+++.|+++
T Consensus       172 ~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~-----~a~~~~~~l~~r~p~nrLg~~~~~~~eik~  242 (612)
T KOG0603|consen  172 ADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSA-----EARSLFRQLFKRNPENRLGAGPDGVDEIKQ  242 (612)
T ss_pred             ccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhH-----HHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence            9999999999999999999987    7888888877777766554     88999999999999999986 367899999


Q ss_pred             CCCcCCCCcc--cccccCCCCCCCCCCCCCCCCCCC
Q 013016          406 HPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFPDQ  439 (451)
Q Consensus       406 hp~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~  439 (451)
                      |+||+.++|.  ..+...+|+.|+........+.|.
T Consensus       243 h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~  278 (612)
T KOG0603|consen  243 HEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDP  278 (612)
T ss_pred             cchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCc
Confidence            9999999999  458888889999887544444443

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=1.5e-28  Score=218.73  Aligned_cols=165  Identities=18%  Similarity=0.141  Sum_probs=128.9

Q ss_pred             CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCC
Q 013016          174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS  253 (451)
Q Consensus       174 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  253 (451)
                      |+|.+++... +..+++..++.|+.||+.||.|||+++      ||+|||++.++.+|+  ||++.....          
T Consensus         1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------   61 (176)
T smart00750        1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------   61 (176)
T ss_pred             CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence            6899988764 356999999999999999999999998      999999999999999  998742210          


Q ss_pred             CCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHH
Q 013016          254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFG  333 (451)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG  333 (451)
                                                                        ....||+.|||||++.+..++.++||||||
T Consensus        62 --------------------------------------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG   91 (176)
T smart00750       62 --------------------------------------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLG   91 (176)
T ss_pred             --------------------------------------------------ccCCCcccccChHHhcCCCCcchhhHHHHH
Confidence                                                              011578999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCC--CCCCcChH--HHHHHHHHhcccCcCCcCCCCCChHHHHcCCC
Q 013016          334 IFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQ--SPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPF  408 (451)
Q Consensus       334 ~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~--~~~~~~~~--~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~  408 (451)
                      |++|||++|+.||...... ..+..+..........  ........  ++.+++.+||+.||.+||+    +.|+++|+|
T Consensus        92 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~  167 (176)
T smart00750       92 ITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCR  167 (176)
T ss_pred             HHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHH
Confidence            9999999999999765432 3344443332221111  01111121  5899999999999999999    999999998


Q ss_pred             cCC
Q 013016          409 FKG  411 (451)
Q Consensus       409 ~~~  411 (451)
                      +..
T Consensus       168 ~~~  170 (176)
T smart00750      168 ALF  170 (176)
T ss_pred             HHH
Confidence            764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=9.8e-30  Score=264.05  Aligned_cols=264  Identities=24%  Similarity=0.353  Sum_probs=194.6

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcch---HHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK---EVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ...+.+|.|++|.|+.+......+.         ++.|.++.   ...........+..|..+-..+.|+||+..+..+.
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~---------~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~  391 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKS---------FPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQ  391 (601)
T ss_pred             CccceeeecccCceEEEEecCCCcc---------chhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHh
Confidence            4567899999998877765544432         33333321   11112222222556777788889999988887776


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.....-+||||++ +|..++...  +.+....+-.++.|++.||+|||+.||.|||||++|++++.+|.+||+|||.+.
T Consensus       392 ~~~~~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~  468 (601)
T KOG0590|consen  392 EIDGILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAAS  468 (601)
T ss_pred             hcccchhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcce
Confidence            66655555999999 999988775  458999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      +....                                                   .+........++|+..|+|||++.
T Consensus       469 vf~~~---------------------------------------------------~e~~~~~~~g~~gS~pY~apE~~~  497 (601)
T KOG0590|consen  469 VFRYP---------------------------------------------------WEKNIHESSGIVGSDPYLAPEVLT  497 (601)
T ss_pred             eeccC---------------------------------------------------cchhhhhhcCcccCCcCcCccccc
Confidence            43211                                                   111223334568999999999999


Q ss_pred             CCCCC-cchhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhc-CCCC---CCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          320 GGSHG-NAVDWWAFGIFIYEMIYGRTPFAAPSNETTL-RNIVK-KPLT---FPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       320 ~~~~~-~~~DIwSlG~il~elltg~~pf~~~~~~~~~-~~i~~-~~~~---~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      +..|+ ..+||||.|++++.|++|+.||..+...+.. ..... ....   -+.... ...+...+.+|.+||++||.+|
T Consensus       498 ~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~l~~~P~~R  576 (601)
T KOG0590|consen  498 GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLL-SLLPRETRIIIYRMLQLDPTKR  576 (601)
T ss_pred             ccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHH-HhchhhHHHHHHHHccCChhhe
Confidence            99985 5799999999999999999999876554332 11111 1110   111111 1223377899999999999999


Q ss_pred             CCCCCChHHHHcCCCcCCCCc
Q 013016          394 LGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~~~~  414 (451)
                      .|    +++|++++||+++.-
T Consensus       577 ~t----i~~i~~d~W~~~i~~  593 (601)
T KOG0590|consen  577 IT----IEQILNDEWIRSIEC  593 (601)
T ss_pred             ec----HHHHhhChHhhhcce
Confidence            99    999999999999754

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-26  Score=226.00  Aligned_cols=263  Identities=27%  Similarity=0.366  Sum_probs=194.8

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC----CCCccceeE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD----HPFLPTLYA  156 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----h~nIv~l~~  156 (451)
                      +|.+.++||+|+||.||+|.+.....        ..+|+|+.........   ..+..|..++..+.    ..++..+++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~--------~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~   87 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKN--------KEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLD   87 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCC--------eeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEE
Confidence            79999999999999999999876541        1389999875422111   14555888888886    368999999


Q ss_pred             EE-EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-----CCE
Q 013016          157 EF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-----GHI  230 (451)
Q Consensus       157 ~~-~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-----~~~  230 (451)
                      .+ ..+.+.|+||+++ |.+|.++......+.|+...+..|+.|++.+|++||+.|++||||||+|+++...     ..+
T Consensus        88 ~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~  166 (322)
T KOG1164|consen   88 HGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTL  166 (322)
T ss_pred             eccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceE
Confidence            99 5888999999999 9999999877777889999999999999999999999999999999999999865     368


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      .|.|||+++..........                                    . ..+        .......+.||.
T Consensus       167 ~llDfGlar~~~~~~~~~~------------------------------------~-~~~--------~r~~~~~~rGT~  201 (322)
T KOG1164|consen  167 YLLDFGLARRFKYVGDSGG------------------------------------N-LRP--------PRPQKGLFRGTL  201 (322)
T ss_pred             EEEecCCCccccccCCCCc------------------------------------c-ccc--------CCCCccCCCCcc
Confidence            9999999852211100000                                    0 000        000012357999


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      .|+++.+..+...+.+.|+||++.++.+|+.|..||...........+................+..+.++...+-+.+.
T Consensus       202 ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (322)
T KOG1164|consen  202 RYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDY  281 (322)
T ss_pred             ccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCC
Confidence            99999999999999999999999999999999999977554322222222111111110122233377888888888999


Q ss_pred             CCcCCCCCChHHHH
Q 013016          391 CNRLGSKRGAADVK  404 (451)
Q Consensus       391 ~~Rpt~~~~~~ell  404 (451)
                      ..+|.    ...+.
T Consensus       282 ~~~Pd----y~~~~  291 (322)
T KOG1164|consen  282 EDKPD----YEKLA  291 (322)
T ss_pred             cCCCC----HHHHH
Confidence            99999    55544

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.94  E-value=2.4e-25  Score=215.28  Aligned_cols=265  Identities=37%  Similarity=0.564  Sum_probs=206.0

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC-CccceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP-FLPTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-nIv~l~~~~~~  160 (451)
                      |.+...||.|+||.||++.+.   .         .+++|.+.............+.+|+.+++.+.|+ +|+++++.+..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~---------~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~   69 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---K---------LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD   69 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---c---------EEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec
Confidence            788899999999999999987   1         3899999877554433567788899999999988 79999999988


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEeccCcc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLS  238 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg~a  238 (451)
                      ....+++++++.+++|.+++..... ..+.......++.|++.++.|+|+.|++||||||+||+++..+ .++++|||.+
T Consensus        70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~  149 (384)
T COG0515          70 EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLA  149 (384)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcc
Confidence            8889999999999999977665432 2589999999999999999999999999999999999999988 7999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ............                                                 ........|+..|++||.+
T Consensus       150 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~t~~~~~pe~~  180 (384)
T COG0515         150 KLLPDPGSTSSI-------------------------------------------------PALPSTSVGTPGYMAPEVL  180 (384)
T ss_pred             eecCCCCccccc-------------------------------------------------cccccccccccccCCHHHh
Confidence            422111000000                                                 0112345899999999999


Q ss_pred             cC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCCCC-CCCCCCCCc---ChHHHHHHHHHhcc
Q 013016          319 SG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN----ETTLRNIVKKPLT-FPTQSPSSM---SEYHARDLISGLLN  387 (451)
Q Consensus       319 ~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~-~~~~~~~~~---~~~~~~~ll~~~L~  387 (451)
                      .+   ..+....|+||+|++++++++|..||.....    ......+...... .........   ....+.+++.+++.
T Consensus       181 ~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (384)
T COG0515         181 LGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLA  260 (384)
T ss_pred             cCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHh
Confidence            88   5678999999999999999999999887663    3444444443322 121111111   11368899999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .+|..|.+    ..+...++|...
T Consensus       261 ~~~~~r~~----~~~~~~~~~~~~  280 (384)
T COG0515         261 KDPKNRLS----SSSDLSHDLLAH  280 (384)
T ss_pred             cCchhcCC----HHHHhhchHhhC
Confidence            99999999    888877766655

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=3.8e-26  Score=210.30  Aligned_cols=252  Identities=20%  Similarity=0.301  Sum_probs=197.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      -.|.+.++||+|+||..++|...-+.+         .||||.-....     ..-.+..|....+.| ..++|..+|-+.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne---------~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFG   93 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNE---------PVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFG   93 (449)
T ss_pred             ccceeccccccCcceeeecccccccCc---------eEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeec
Confidence            369999999999999999998776654         49999876442     223445588888887 589999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-----CEEEe
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-----HIMLS  233 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-----~~kl~  233 (451)
                      .++.+-.||+|++ |.||.|+..-. +..|+...+..++.|++.-++|+|++.+|+|||||+|+||...+     .+-++
T Consensus        94 qeG~~NiLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ihii  171 (449)
T KOG1165|consen   94 QEGKYNILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHII  171 (449)
T ss_pred             cccchhhhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEE
Confidence            9999999999999 99999988765 45699999999999999999999999999999999999998543     58899


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+...++......+                                                .....+..||..||
T Consensus       172 DFGmAK~YrDp~TkqHIP------------------------------------------------YrE~KSLsGTARYM  203 (449)
T KOG1165|consen  172 DFGMAKEYRDPKTKQHIP------------------------------------------------YREHKSLSGTARYM  203 (449)
T ss_pred             eccchhhhcCccccccCc------------------------------------------------cccccccccceeee
Confidence            999998765544433211                                                01122457999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA---PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      +----+|...+.+.|+=|||-|++..|-|..||.+   +...+-+.+|-..+...+......-.+.++..-++-.-..+-
T Consensus       204 SINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F  283 (449)
T KOG1165|consen  204 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDF  283 (449)
T ss_pred             EeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCc
Confidence            98888898899999999999999999999999987   445666666665555444433333344466666666666666


Q ss_pred             CCcCC
Q 013016          391 CNRLG  395 (451)
Q Consensus       391 ~~Rpt  395 (451)
                      .+-|.
T Consensus       284 ~E~PD  288 (449)
T KOG1165|consen  284 FETPD  288 (449)
T ss_pred             ccCCC
Confidence            66666

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-26  Score=204.52  Aligned_cols=255  Identities=20%  Similarity=0.284  Sum_probs=201.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~  156 (451)
                      ..+.|.++++||.|+||.+|+|.....+.+         ||||+-.+..     ....+..|..+.+.|+ ...|+.+..
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~---------VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~   78 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEE---------VAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRH   78 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCce---------EEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhh
Confidence            347899999999999999999998887765         9999986542     2234555889999997 578999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEEe
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLS  233 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~  233 (451)
                      ++.+..+-.|||+++ |.||.++.+-.. ..|+..++.-++-|++.-++|+|.+++|||||||+|+|+.-+   ..+-|+
T Consensus        79 y~~e~~ynvlVMdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LI  156 (341)
T KOG1163|consen   79 YGTEKDYNVLVMDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLI  156 (341)
T ss_pred             hccccccceeeeecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEE
Confidence            999999999999999 999999887553 559999999999999999999999999999999999999743   578999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+...+.......+                                                ........||..|.
T Consensus       157 DFGLaKky~d~~t~~HIp------------------------------------------------yre~r~ltGTaRYA  188 (341)
T KOG1163|consen  157 DFGLAKKYRDIRTRQHIP------------------------------------------------YREDRNLTGTARYA  188 (341)
T ss_pred             eccchhhhccccccccCc------------------------------------------------cccCCccceeeeeh
Confidence            999997543322111100                                                00112357999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP---SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      +--...|...+...|+-|+|.+|..+.-|..||.+.   +...-..+|...+...+.+....-.+.++...+.-|-..--
T Consensus       189 SinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F  268 (341)
T KOG1163|consen  189 SINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGF  268 (341)
T ss_pred             hhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCC
Confidence            988888877889999999999999999999999984   33445666766666655544444455578888888888777


Q ss_pred             CCcCCC
Q 013016          391 CNRLGS  396 (451)
Q Consensus       391 ~~Rpt~  396 (451)
                      ++-|..
T Consensus       269 ~E~Pdy  274 (341)
T KOG1163|consen  269 EEKPDY  274 (341)
T ss_pred             CCCCcH
Confidence            777773

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.94  E-value=1e-26  Score=241.69  Aligned_cols=265  Identities=33%  Similarity=0.581  Sum_probs=195.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|..++.+..|+||-||+++++.+.++         +|+|+ +++...-        +-  ++..-..|.+|       
T Consensus        83 ~df~~IklisngAygavylvrh~~trqr---------fa~ki-Nkq~lil--------Rn--ilt~a~npfvv-------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQR---------FAMKI-NKQNLIL--------RN--ILTFAGNPFVV-------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccc---------hhhcc-cccchhh--------hc--cccccCCccee-------
Confidence            6799999999999999999999987765         89854 3331110        00  22222233322       


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                    |+=..+++..  +.++...        +.+++|||+.||+|||+||+|.+|+.-|.+|++|||+++
T Consensus       136 --------------gDc~tllk~~--g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk  191 (1205)
T KOG0606|consen  136 --------------GDCATLLKNI--GPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSK  191 (1205)
T ss_pred             --------------chhhhhcccC--CCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhh
Confidence                          2223333332  2344322        789999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....-...                  .+.             .+|..         +........++||+.|.|||++.
T Consensus       192 ~GLms~atn------------------l~e-------------g~I~k---------~t~Ef~dKqvcgTPeyiaPeVil  231 (1205)
T KOG0606|consen  192 KGLMSLATN------------------LKE-------------GHIEK---------DTHEFQDKQVCGTPEYIAPEVIL  231 (1205)
T ss_pred             hhhhhccch------------------hhh-------------cchHH---------HHHHhhhccccCCccccChhhhh
Confidence            432111100                  000             00000         00111112469999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      ...|+..+|.|++|+|+||.+-|+.||.+...++.+..++...+.++...+ . .+.++++++.++|..+|..|.... +
T Consensus       232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~de-a-~p~Ea~dli~~LL~qnp~~Rlgt~-g  308 (1205)
T KOG0606|consen  232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDE-A-LPPEAQDLIEQLLRQNPLCRLGTG-G  308 (1205)
T ss_pred             hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCc-C-CCHHHHHHHHHHHHhChHhhcccc-h
Confidence            999999999999999999999999999999999999999999998888733 2 344899999999999999998754 6


Q ss_pred             hHHHHcCCCcCCCCcccccccCCCCCCCCCCCCCCCCCC
Q 013016          400 AADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      +-+|.+|+||+.+||..+-.+-.+++|.........|.+
T Consensus       309 a~evk~h~ff~~LDw~~llRqkaefvpql~~eddtsyfd  347 (1205)
T KOG0606|consen  309 ALEVKQHGFFQLLDWKSLLRQKAEFVPQLESEDDTSYFD  347 (1205)
T ss_pred             hhhhhhccceeecccchhhhhhccccccccccccchhhc
Confidence            889999999999999977667778999888765555554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=207.66  Aligned_cols=253  Identities=21%  Similarity=0.316  Sum_probs=205.3

Q ss_pred             hhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH
Q 013016           66 IRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM  145 (451)
Q Consensus        66 ~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~  145 (451)
                      -+.+|+++..|+.+++..+.-+|.+...|..|+|+|.++.           +++|++.-+.. .......|..|.-.|+.
T Consensus       176 ~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwqgnd-----------ivakil~vr~~-t~risrdfneefp~lri  243 (448)
T KOG0195|consen  176 TRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQGND-----------IVAKILNVREV-TARISRDFNEEFPALRI  243 (448)
T ss_pred             ccccccccccCcchhhhhhhhhhccCCCcccccccccCcc-----------hhhhhhhhhhc-chhhcchhhhhCcceee
Confidence            3567888889999999999999999999999999999875           78888875543 33445667778888999


Q ss_pred             CCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEE
Q 013016          146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVL  223 (451)
Q Consensus       146 l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIl  223 (451)
                      +.||||+.+++.|....++.+|..||+.|||+++++...+-..+..++.+++.+|++|++|||+..  |..-.|....++
T Consensus       244 fshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvm  323 (448)
T KOG0195|consen  244 FSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVM  323 (448)
T ss_pred             ecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEE
Confidence            999999999999999999999999999999999999987777889999999999999999999865  555578899999


Q ss_pred             EccCCCEEEe--ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          224 VRSDGHIMLS--DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       224 l~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ++++.+.+|.  |--++...                                                ++          
T Consensus       324 idedltarismad~kfsfqe------------------------------------------------~g----------  345 (448)
T KOG0195|consen  324 IDEDLTARISMADTKFSFQE------------------------------------------------VG----------  345 (448)
T ss_pred             ecchhhhheecccceeeeec------------------------------------------------cc----------
Confidence            9999876654  43332100                                                00          


Q ss_pred             cccccccCCCccCcccccCCCC---CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~---~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                          ..-.+.||+||.+...+-   -.++|+|||+++||||.|.+.||...++.+.-.++.-+-+  ....++.+.. .+
T Consensus       346 ----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl--rv~ippgis~-hm  418 (448)
T KOG0195|consen  346 ----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL--RVHIPPGISR-HM  418 (448)
T ss_pred             ----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc--cccCCCCccH-HH
Confidence                023467999999988664   3589999999999999999999999888887666654332  2223333333 88


Q ss_pred             HHHHHHhcccCcCCcCC
Q 013016          379 RDLISGLLNKDPCNRLG  395 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt  395 (451)
                      .+|++-|++.||.+||.
T Consensus       419 ~klm~icmnedpgkrpk  435 (448)
T KOG0195|consen  419 NKLMNICMNEDPGKRPK  435 (448)
T ss_pred             HHHHHHHhcCCCCcCCC
Confidence            99999999999999999

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.8e-25  Score=218.56  Aligned_cols=141  Identities=26%  Similarity=0.220  Sum_probs=111.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH--HHHHHHHHHHHHHHHHHHCCCCCccc-eeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRAEMEKKILKMLDHPFLPT-LYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~nIv~-l~~  156 (451)
                      ++|.+.+.||+|+||+||+|.++.....        .+|||++.....  ........+.+|+++|++++|+||+. +++
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~--------~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~   89 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGT--------ARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA   89 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCe--------EEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence            7799999999999999999988753221        479998753311  12223456788999999999999985 443


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEEccCCCEEEecc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDL-KPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dl-kp~NIll~~~~~~kl~Df  235 (451)
                          .+..||||||++|++|... .  .   ..   ...++.|++.||.|||++||+|||| ||+|||++.++.++|+||
T Consensus        90 ----~~~~~LVmE~~~G~~L~~~-~--~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDF  156 (365)
T PRK09188         90 ----TGKDGLVRGWTEGVPLHLA-R--P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDF  156 (365)
T ss_pred             ----cCCcEEEEEccCCCCHHHh-C--c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence                2468999999999999632 1  1   11   1467899999999999999999999 999999999999999999


Q ss_pred             Cccccc
Q 013016          236 DLSLCS  241 (451)
Q Consensus       236 g~a~~~  241 (451)
                      |+|...
T Consensus       157 GlA~~~  162 (365)
T PRK09188        157 QLASVF  162 (365)
T ss_pred             ccceec
Confidence            998644

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.91  E-value=1.8e-24  Score=197.17  Aligned_cols=138  Identities=17%  Similarity=0.188  Sum_probs=113.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHH------HHHHHHHHHHCCCCCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR------AEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~nIv~  153 (451)
                      ++|.+.+.||.|+||.||++... ..+          +|||+++............      +++|+..+.++.|++|..
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~~-~~~----------~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~   99 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDTD-YGK----------YILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLAS   99 (232)
T ss_pred             CceEEEEEecCCCceEEEEEecC-CCc----------EEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence            78999999999999999997553 222          9999998665444444333      578899999999999999


Q ss_pred             eeEEEEeC--------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          154 LYAEFEAS--------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       154 l~~~~~~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      +.+++...        +..+|||||++|.+|.++..      +++    ....+|+.+|..||+.|++|||+||+||+++
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            99886643        35899999999999988732      333    2456999999999999999999999999999


Q ss_pred             cCCCEEEeccCccc
Q 013016          226 SDGHIMLSDFDLSL  239 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~  239 (451)
                      .+| ++|+|||...
T Consensus       170 ~~g-i~liDfg~~~  182 (232)
T PRK10359        170 KNG-LRIIDLSGKR  182 (232)
T ss_pred             CCC-EEEEECCCcc
Confidence            988 9999999863

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.89  E-value=1.7e-24  Score=225.38  Aligned_cols=255  Identities=21%  Similarity=0.280  Sum_probs=179.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-HHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-KKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +|...+.||.+.|=+|.+|.+.++.           |+||++.+.... .-........|++ ...++|||++.+.-+.+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-----------vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~   91 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-----------VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV   91 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-----------EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH
Confidence            6888999999999999999887763           999999876421 1122333334555 66679999999999888


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .....|||-+|. .-+|+|-+..++-  +...+.+-|+.||+.||.-+|..||+|||||.+||||+.=+-+.|+||..=+
T Consensus        92 t~kAAylvRqyv-khnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen   92 TDKAAYLVRQYV-KHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             hhHHHHHHHHHH-hhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccC
Confidence            888999999999 6688888877533  7788888899999999999999999999999999999998899999996421


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .     .                                |..++.=.+    ..|..+....+       ..|.|||-+.
T Consensus       169 P-----t--------------------------------YLPeDNPad----f~fFFDTSrRR-------tCYiAPERFv  200 (1431)
T KOG1240|consen  169 P-----T--------------------------------YLPEDNPAD----FTFFFDTSRRR-------TCYIAPERFV  200 (1431)
T ss_pred             C-----c--------------------------------cCCCCCccc----ceEEEecCCce-------eeecChHhhh
Confidence            0     0                                000000000    11222222211       2499999874


Q ss_pred             CC----------C-CCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          320 GG----------S-HGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       320 ~~----------~-~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      ..          . .+++-||||+||+++||++ |++||.-    ..+.....+.-..+......+.+..++++|..|++
T Consensus       201 ~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~  276 (1431)
T KOG1240|consen  201 SALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQ  276 (1431)
T ss_pred             ccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHc
Confidence            31          1 3578899999999999998 8999952    11111111100000000111112268999999999


Q ss_pred             cCcCCcCCCCCChHHHHcC
Q 013016          388 KDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~h  406 (451)
                      .||.+|.+    |++.|+-
T Consensus       277 rdPs~RlS----AedyL~~  291 (1431)
T KOG1240|consen  277 RDPSKRLS----AEDYLQK  291 (1431)
T ss_pred             cCchhccC----HHHHHHh
Confidence            99999999    9999875

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=3.5e-23  Score=186.18  Aligned_cols=141  Identities=24%  Similarity=0.248  Sum_probs=107.3

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-----------------------HHHHHHHHHH
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-----------------------KVHRAEMEKK  141 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~  141 (451)
                      ...||+|++|.||+|.+. +++         .||||+++........                       .......|+.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~---------~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGE---------ERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMR   71 (190)
T ss_pred             CCccccccceEEEEEECC-CCC---------EEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHH
Confidence            457999999999999986 443         3999999765321110                       0122345899


Q ss_pred             HHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCC
Q 013016          142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL-HMLGIIYRDLKPE  220 (451)
Q Consensus       142 ~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~givH~Dlkp~  220 (451)
                      ++.++.++++........ .. .+|||||++|++|......  ...+++..+..++.||+.+|.+| |+.||+||||||+
T Consensus        72 ~l~~l~~~~v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~  147 (190)
T cd05147          72 NLKRLVTAGIPCPEPILL-KS-HVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEY  147 (190)
T ss_pred             HHHHHHHCCCCCCcEEEe-cC-CEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            999998887754443322 22 3899999988777654322  24689999999999999999999 6999999999999


Q ss_pred             cEEEccCCCEEEeccCcccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~  240 (451)
                      |||++ ++.++|+|||+|..
T Consensus       148 NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147         148 NLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             HEEEE-CCcEEEEEcccccc
Confidence            99998 58899999999853

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.88  E-value=4.1e-23  Score=193.79  Aligned_cols=237  Identities=22%  Similarity=0.323  Sum_probs=149.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC----------C
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH----------P  149 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~  149 (451)
                      ..+...+.||.|+++.||.+++.+++++         +|||++...........+.+.+|......+.+          -
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~---------~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~   82 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEE---------FAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHL   82 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEE---------EEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH
T ss_pred             eEEEEccccccCCceEEEEEEEccCCce---------EEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhc
Confidence            4577788999999999999999988764         99999976554444455555555544433322          1


Q ss_pred             CccceeEEE---------EeC---C-----eEEEEEeeccCCchhhhhhh---CCCC--CCCHHHHHHHHHHHHHHHHHH
Q 013016          150 FLPTLYAEF---------EAS---N-----FSCIVMEFCSGGDLHSLRHK---QPHK--RFSLTSARFYAAEVLVALEYL  207 (451)
Q Consensus       150 nIv~l~~~~---------~~~---~-----~~~lV~E~~~ggsL~~~l~~---~~~~--~l~~~~~~~i~~qil~aL~~L  207 (451)
                      .++.-++..         ...   .     ..+++|+-+ -++|.+++..   ....  .+.......+..|++..+++|
T Consensus        83 r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~L  161 (288)
T PF14531_consen   83 RFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANL  161 (288)
T ss_dssp             -B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence            222222222         111   1     347889988 7788876542   2111  233444566779999999999


Q ss_pred             HHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccc
Q 013016          208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQT  287 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (451)
                      |..|+||+||+|+|++++.+|.+.|+||+.....+..                                           
T Consensus       162 h~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-------------------------------------------  198 (288)
T PF14531_consen  162 HSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR-------------------------------------------  198 (288)
T ss_dssp             HHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEE-------------------------------------------
T ss_pred             hhcceEecccceeeEEEcCCCCEEEcChHHHeecCce-------------------------------------------
Confidence            9999999999999999999999999999875321100                                           


Q ss_pred             cCCCcccccccccccccccccCCCccCcccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Q 013016          288 LTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG--------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV  359 (451)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~  359 (451)
                                    ... -..+..|.+||....        ..++.+.|.|+||++||.|++|..||...........  
T Consensus       199 --------------~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--  261 (288)
T PF14531_consen  199 --------------YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--  261 (288)
T ss_dssp             --------------EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--
T ss_pred             --------------eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--
Confidence                          000 123466899997643        2368899999999999999999999986533222111  


Q ss_pred             cCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                            ....+. ..+..++.||.++|++||.+|
T Consensus       262 ------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 ------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             ------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence                  111112 233389999999999999988

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=5.7e-22  Score=178.75  Aligned_cols=141  Identities=21%  Similarity=0.191  Sum_probs=109.2

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-----------------------HHHHHHHHHHHH
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-----------------------KKKVHRAEMEKK  141 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~  141 (451)
                      .+.||+|++|.||+|.+. +++         .||||+++......                       .........|..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~---------~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGE---------ELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFR   71 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCC---------EEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHH
Confidence            467999999999999976 333         39999998652110                       011223457889


Q ss_pred             HHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCC
Q 013016          142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKP  219 (451)
Q Consensus       142 ~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~-l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp  219 (451)
                      .+.++.|++|.....+....  .||||||++|+++... +..   ..++...+..++.|++.+|.+||+ +||+||||||
T Consensus        72 ~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP  146 (190)
T cd05145          72 NLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSE  146 (190)
T ss_pred             HHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCh
Confidence            99999999885554443332  4899999988765432 332   457888999999999999999999 9999999999


Q ss_pred             CcEEEccCCCEEEeccCccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +|||++ ++.++|+|||++...
T Consensus       147 ~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         147 YNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             hhEEEE-CCCEEEEEcccceec
Confidence            999999 899999999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.5e-21  Score=174.38  Aligned_cols=202  Identities=18%  Similarity=0.179  Sum_probs=136.9

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-HHHHHHHHHHHHHHCC-CCCccceeEEEEe
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-KVHRAEMEKKILKMLD-HPFLPTLYAEFEA  160 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~  160 (451)
                      .+...|+.|+||+||++...+.           .++.+.+......... ....+.+|+++|+++. |++|++++++   
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~-----------k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---   70 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGER-----------KFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---   70 (218)
T ss_pred             ccceeecCCCcceEEEeecCCc-----------eeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---
Confidence            4567899999999997765222           2665655433322111 1235778999999995 5889999986   


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDL-KPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dl-kp~NIll~~~~~~kl~Dfg~a~  239 (451)
                       +..|++|||+.|.+|.+.+..        . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||++.
T Consensus        71 -~~~~lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~  140 (218)
T PRK12274         71 -DGRHLDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAV  140 (218)
T ss_pred             -cCEEEEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence             346999999999998654211        1 1357889999999999999999999 7999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .........             ..........+.++    |                         ...++.|+.|+...
T Consensus       141 ~~~~~~~~~-------------r~L~~rDl~~llk~----~-------------------------~~y~~~~l~~~~~~  178 (218)
T PRK12274        141 RGNPRARWM-------------RLLAREDLRHLLKH----K-------------------------RMYCPAALTPVERR  178 (218)
T ss_pred             ecCCcchHH-------------HHHHHHHHHHHHHH----H-------------------------HhcCCCCCCHHHHh
Confidence            322100000             00000011111111    1                         13566788888643


Q ss_pred             CC-CCC-cchhHHHHHHHHHHHHhCCCCCCCCC
Q 013016          320 GG-SHG-NAVDWWAFGIFIYEMIYGRTPFAAPS  350 (451)
Q Consensus       320 ~~-~~~-~~~DIwSlG~il~elltg~~pf~~~~  350 (451)
                      -. ..+ ...+.++.|+-+|.++|+..+..+..
T Consensus       179 ~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        179 VLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             hhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            32 223 56788899999999999999876543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-22  Score=190.45  Aligned_cols=274  Identities=23%  Similarity=0.335  Sum_probs=176.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEecccccc-------------------CC----CCCCc---ceEEEEEcchHHHHH
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ-------------------DR----GHEPC---CLYAMKVVNKEVLEK  129 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~-------------------~~----~~~~~---~~vavK~~~~~~~~~  129 (451)
                      +.++++|+|..-||+|..+.||.|+....+..                   +.    .++++   =..|||.+-.-...+
T Consensus       153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s  232 (598)
T KOG4158|consen  153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS  232 (598)
T ss_pred             ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence            34567899999999999999999987653211                   00    00111   135666653221110


Q ss_pred             --HHHHHHHHHHH--------------HHHHHC--------CCCCccceeEEEEe-------------------------
Q 013016          130 --KKKVHRAEMEK--------------KILKML--------DHPFLPTLYAEFEA-------------------------  160 (451)
Q Consensus       130 --~~~~~~~~~e~--------------~~l~~l--------~h~nIv~l~~~~~~-------------------------  160 (451)
                        ....+.+.+|.              ...+.+        .|||||++.++|.+                         
T Consensus       233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~  312 (598)
T KOG4158|consen  233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA  312 (598)
T ss_pred             chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence              11111111121              111122        59999999987732                         


Q ss_pred             --CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC--C--CEEEec
Q 013016          161 --SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD--G--HIMLSD  234 (451)
Q Consensus       161 --~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~--~--~~kl~D  234 (451)
                        +..+|+||.-+ ..+|.+++-.+.   .+.....-|+.|+++|+.|||++||.|||+|.+|||+.-+  +  .+.|+|
T Consensus       313 g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD  388 (598)
T KOG4158|consen  313 GEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD  388 (598)
T ss_pred             CCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence              23789999988 679999987642   5677788899999999999999999999999999999633  3  578999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|.......-..                                                 +..+.....-|.-.-||
T Consensus       389 FGCcLAd~~hGlql-------------------------------------------------py~S~~Vd~GGNa~lmA  419 (598)
T KOG4158|consen  389 FGCCLADDNHGLQL-------------------------------------------------PYESDEVDLGGNAKLMA  419 (598)
T ss_pred             cceeeecccccccc-------------------------------------------------ccccccccCCCcceecc
Confidence            99985322110000                                                 00011112256777999


Q ss_pred             cccccCCC-----C-CcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhc-CCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          315 PEVASGGS-----H-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVK-KPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       315 PE~~~~~~-----~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~~i~~-~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      ||+....+     . -.++|.|+.|.+.||+++...||........ .....+ ..+..+..     .+..++++|..+|
T Consensus       420 PEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~-----vpp~~rqlV~~lL  494 (598)
T KOG4158|consen  420 PEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSR-----VPPVARQLVFDLL  494 (598)
T ss_pred             hhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCccc-----CChHHHHHHHHHh
Confidence            99875422     1 3489999999999999999999987433211 111111 22223332     2338999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCC
Q 013016          387 NKDPCNRLGSKRGAADVKTHPF  408 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~  408 (451)
                      +.||++|+++. .+..+|+.-.
T Consensus       495 ~r~pskRvsp~-iAANvl~LsL  515 (598)
T KOG4158|consen  495 KRDPSKRVSPN-IAANVLNLSL  515 (598)
T ss_pred             cCCccccCCcc-HHHhHHHHHH
Confidence            99999999953 2455554433

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.5e-21  Score=207.10  Aligned_cols=196  Identities=24%  Similarity=0.369  Sum_probs=157.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC---CCCcccee
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD---HPFLPTLY  155 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~nIv~l~  155 (451)
                      ...|.|.+.||+|+||+||+|...+ ++         +||||+-+....      .++..-.+++.+|+   -+.|..+.
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~---------~~alK~e~P~~~------WEfYI~~q~~~RLk~~~~~~~~~~~  760 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GK---------LVALKVEKPPNP------WEFYICLQVMERLKPQMLPSIMHIS  760 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-Cc---------EEEEEeecCCCc------eeeeehHHHHHhhchhhhcchHHHH
Confidence            3569999999999999999998776 22         699999865433      33334455666665   34566777


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-------CC
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-------DG  228 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-------~~  228 (451)
                      .++...+..+||+||.+.|+|.++++.  .+.+++..++.++.||+.-|++||..+||||||||+|+||..       ..
T Consensus       761 ~a~~~~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~  838 (974)
T KOG1166|consen  761 SAHVFQNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSK  838 (974)
T ss_pred             HHHccCCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCccc
Confidence            777778888999999999999999984  466999999999999999999999999999999999999963       23


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      -++|+|||.+.-+.-.+.                                                     ..+-...++
T Consensus       839 ~l~lIDfG~siDm~lfp~-----------------------------------------------------~~~F~~~~~  865 (974)
T KOG1166|consen  839 GLYLIDFGRSIDMKLFPD-----------------------------------------------------GTKFKAVWH  865 (974)
T ss_pred             ceEEEecccceeeeEcCC-----------------------------------------------------CcEEeeeec
Confidence            689999999853221111                                                     122334588


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP  345 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~p  345 (451)
                      |-.+-.+|...|.+|++.+|.|.|+.+++-||.|+..
T Consensus       866 td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  866 TDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             cccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998753

>PRK10345 hypothetical protein; Provisional

Probab=99.85  E-value=1e-20  Score=171.87  Aligned_cols=133  Identities=20%  Similarity=0.220  Sum_probs=103.7

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-----CCCCccceeEEEE
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-----DHPFLPTLYAEFE  159 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~nIv~l~~~~~  159 (451)
                      ...||+|+||.||.  +.....          .+||++.....   .....+.+|+.+++.+     .||||++++++++
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~----------k~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~e   71 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQ----------RCIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVE   71 (210)
T ss_pred             cceecCCCceEEEE--CCCCcC----------eEEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEE
Confidence            45799999999995  443332          57999875422   2335577899999999     5799999999998


Q ss_pred             eCC---e-EEEEEee--ccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeccCCCCcEEEccC----C
Q 013016          160 ASN---F-SCIVMEF--CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL-EYLHMLGIIYRDLKPENVLVRSD----G  228 (451)
Q Consensus       160 ~~~---~-~~lV~E~--~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL-~~LH~~givH~Dlkp~NIll~~~----~  228 (451)
                      ++.   . +.+|+||  +.+++|.+++.+.   .+++.  ..++.|++.++ +|||+++|+||||||+|||++..    +
T Consensus        72 t~~g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~  146 (210)
T PRK10345         72 TDCGTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEV  146 (210)
T ss_pred             eCCCCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCC
Confidence            873   4 3489999  5579999999663   36655  35688888888 89999999999999999999743    4


Q ss_pred             CEEEeccCc
Q 013016          229 HIMLSDFDL  237 (451)
Q Consensus       229 ~~kl~Dfg~  237 (451)
                      .++|+||+-
T Consensus       147 ~~~LiDg~G  155 (210)
T PRK10345        147 IPVVCDNIG  155 (210)
T ss_pred             cEEEEECCC
Confidence            899999443

>smart00090 RIO RIO-like kinase

Probab=99.82  E-value=7.7e-20  Score=170.07  Aligned_cols=145  Identities=25%  Similarity=0.226  Sum_probs=110.0

Q ss_pred             CceEEeeeccCCeeEEEEEE-eccccccCCCCCCcceEEEEEcchHHHHH---------------------HHHHHHHHH
Q 013016           81 DFDLHRRIGAGDIGTVYLCS-LNNKYRQDRGHEPCCLYAMKVVNKEVLEK---------------------KKKVHRAEM  138 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~-~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~~~  138 (451)
                      -|.+.+.||.|++|.||+|. +..+++         .||||+++......                     ......+..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~---------~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGK---------ERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK   99 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCc---------EEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence            48899999999999999998 433433         49999997542100                     001123567


Q ss_pred             HHHHHHHCCCCC--ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-Ceec
Q 013016          139 EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG-IIYR  215 (451)
Q Consensus       139 e~~~l~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivH~  215 (451)
                      |+.++.++.+.+  ++++++.   . ..++||||+.|++|..+....  ..+....+..++.||+.+|.+||++| |+||
T Consensus       100 E~~~L~~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~  173 (237)
T smart00090      100 EFRNLQRLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHG  173 (237)
T ss_pred             HHHHHHHHHhcCCCCCeeeEe---c-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeC
Confidence            999999997533  4444442   2 358999999888887654322  34666778899999999999999999 9999


Q ss_pred             cCCCCcEEEccCCCEEEeccCccccc
Q 013016          216 DLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       216 Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      ||||+||+++ ++.++|+|||.+...
T Consensus       174 Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      174 DLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             CCChhhEEEE-CCCEEEEEChhhhcc
Confidence            9999999999 889999999998543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.82  E-value=6.3e-21  Score=186.69  Aligned_cols=185  Identities=28%  Similarity=0.411  Sum_probs=140.5

Q ss_pred             CeEEEEEeeccCCchhhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQ-PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      .++||.|++|...+|.+++... ....-++...+.++.|+..|++|   +|.+|+|+||.||++..+..+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            3789999999999999999744 34457888999999999999999   9999999999999999999999999999743


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ....+.                                                 ..........-+||..||+||++.|
T Consensus       406 ~~~~~~-------------------------------------------------~~~~~a~~t~~~gt~~YmsPEQi~g  436 (516)
T KOG1033|consen  406 QDKDET-------------------------------------------------VAPAAASHTQQVGTLLYMSPEQIRG  436 (516)
T ss_pred             cccCCc-------------------------------------------------ccchhhhhhhcccccccCCHHHHhh
Confidence            322110                                                 0001122233489999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCC-CCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      ..|+.++||||||+||+||+. -...|.   ....+..+-.+.++.. ....    + +-..|+..||...|.+||+   
T Consensus       437 ~~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~ip~~~~~d~----p-~e~~ll~~lls~~p~~RP~---  505 (516)
T KOG1033|consen  437 QQYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRDGIIPPEFLQDY----P-EEYTLLQQLLSPSPEERPS---  505 (516)
T ss_pred             hhhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCCCChHHhhcC----c-HHHHHHHHhcCCCcccCch---
Confidence            999999999999999999997 333333   2223334444443311 1111    1 5578999999999999998   


Q ss_pred             ChHHHHcCCCcC
Q 013016          399 GAADVKTHPFFK  410 (451)
Q Consensus       399 ~~~ell~hp~~~  410 (451)
                       +.+.--|+|.+
T Consensus       506 -~~~~~~~~~~~  516 (516)
T KOG1033|consen  506 -AIEVALHEFLQ  516 (516)
T ss_pred             -HHHHhhhhhcC
Confidence             88888888864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=4.2e-19  Score=162.75  Aligned_cols=136  Identities=23%  Similarity=0.272  Sum_probs=112.4

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH-----HHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-----EKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +.||+|++|.||+|.+.+.           .+++|+......     ........+.+|+.++..+.|++|+....++..
T Consensus         2 ~~l~~G~~~~vy~~~~~~~-----------~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~   70 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGI-----------KAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD   70 (211)
T ss_pred             cccccCceEEEEEEeeCCC-----------ceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe
Confidence            5799999999999987433           289998653221     112223456779999999999999888877777


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+..++||||++|++|.+++....     . .+..++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+.
T Consensus        71 ~~~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~  142 (211)
T PRK14879         71 PENFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAE  142 (211)
T ss_pred             CCCCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCccc
Confidence            888999999999999999886531     2 7888999999999999999999999999999999 8899999999985

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=3e-19  Score=178.06  Aligned_cols=204  Identities=21%  Similarity=0.295  Sum_probs=153.4

Q ss_pred             HHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeccCCCCc
Q 013016          143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGI-IYRDLKPEN  221 (451)
Q Consensus       143 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi-vH~Dlkp~N  221 (451)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+... ...+++.-...++++|+.||.|||...| +|+.++..|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            35678999999999999999999999999999999998874 3558888899999999999999997665 999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ++++....+||+|||+...........                                                   . 
T Consensus        80 Clvd~~w~lklt~~Gl~~~~~~~~~~~---------------------------------------------------~-  107 (484)
T KOG1023|consen   80 CLVDSRWVLKLTDFGLNSLLEETAEPE---------------------------------------------------A-  107 (484)
T ss_pred             ceeeeeEEEEechhhhccccccccccc---------------------------------------------------c-
Confidence            999999999999999974322100000                                                   0 


Q ss_pred             cccccccCCCccCcccccCCC-------CCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhc-CCCCCCCCC
Q 013016          302 RSCSFVGTHEYVSPEVASGGS-------HGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVK-KPLTFPTQS  369 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~-------~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~-~~~~~~~~~  369 (451)
                       .....-...|.|||.+.+..       -+.+.||||||++++|+++...||....    ..+.+..+.. +...+....
T Consensus       108 -~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i  186 (484)
T KOG1023|consen  108 -HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSI  186 (484)
T ss_pred             -cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcch
Confidence             00001223599999997742       3567999999999999999999997632    2345555555 221121111


Q ss_pred             C-CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHH
Q 013016          370 P-SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK  404 (451)
Q Consensus       370 ~-~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell  404 (451)
                      . ......++..+++.|+..+|.+||+    ++++-
T Consensus       187 ~~~~e~~~~l~~l~~~cw~e~P~~rPs----~~~i~  218 (484)
T KOG1023|consen  187 ELLNELPPELLLLVARCWEEIPEKRPS----IEQIR  218 (484)
T ss_pred             hhhhhcchHHHHHHHHhcccChhhCcc----HHHHH
Confidence            1 1122337899999999999999999    66653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=3.3e-21  Score=200.50  Aligned_cols=266  Identities=25%  Similarity=0.385  Sum_probs=202.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ..|.+.+-||+|+|+.|-++........        .+|+|.+.... ...........|..+-+.+. |.|++.+++..
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~--------~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~   90 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPES--------SSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS   90 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcc--------eeeccCCCCCC-CccchhhhcCccccccccccccccccccCCcc
Confidence            4577788899999999988776544432        36777665432 12223344444777777776 99999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEccCC-CEEEeccC
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDG-HIMLSDFD  236 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~-~~kl~Dfg  236 (451)
                      ......+++++|..|+++.+-+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++..+ .++++|||
T Consensus        91 ~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~  170 (601)
T KOG0590|consen   91 SSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFG  170 (601)
T ss_pred             CCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCch
Confidence            99999999999999999998774222225788889999999999999999 99999999999999999999 99999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc-CCCccCc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG-THEYVSP  315 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aP  315 (451)
                      +|......                                                    ..........+| ++.|+||
T Consensus       171 ~At~~~~~----------------------------------------------------~g~~~~~~~~~g~s~~y~a~  198 (601)
T KOG0590|consen  171 LATAYRNK----------------------------------------------------NGAERSLKDRCGSSPPYGAP  198 (601)
T ss_pred             hhcccccc----------------------------------------------------CCcceeeecccCCCCCCCCc
Confidence            98432210                                                    000011112377 9999999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       316 E~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |...+. ......|+||.|+++.-+++|..|+........ +..+......+-...+..+.. ...+++.++|..+|..|
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~k~l~~~~~~r  277 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISD-QAHDLLHKILKENPSNR  277 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCCh-hhhhcccccccCCchhc
Confidence            999885 457899999999999999999999987655442 222333322222333344444 78999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCC
Q 013016          394 LGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~  411 (451)
                      .+    .+++..++|+..
T Consensus       278 ~s----~~~~~~d~~~~~  291 (601)
T KOG0590|consen  278 LS----IEELKLDNWLSS  291 (601)
T ss_pred             cc----cccccccccccc
Confidence            99    999999999999

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.80  E-value=9.6e-20  Score=190.19  Aligned_cols=265  Identities=31%  Similarity=0.521  Sum_probs=197.2

Q ss_pred             CCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       147 ~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      .+|.++...-.+.-....+||++|+.|++|...++...  ..+...+...+..+..++++||...+.|+|++|.|+|+..
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~  939 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAY  939 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcc
Confidence            44555555544555668899999999999998888763  4677778888899999999999999999999999999999


Q ss_pred             CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccc
Q 013016          227 DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF  306 (451)
Q Consensus       227 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (451)
                      +|..++.|||...............+......++  ...+..                      .+..............
T Consensus       940 ~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~--~~~~~~----------------------~~~~l~~~~~~~~~~~  995 (1205)
T KOG0606|consen  940 DGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPR--RLSRSE----------------------RRPQLSADEARRKHAV  995 (1205)
T ss_pred             cCCcccCccccccccccccCcCCcccccccCccc--cccccc----------------------cccccccchhhccccc
Confidence            9999999999654333222211110000000000  000000                      0000011122234467


Q ss_pred             ccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       307 ~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +||+.|.+||.+.+...+..+|.|++|++++|.++|..||........+.++.++...++....  .-++++++++.++|
T Consensus       996 ~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~--~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen  996 VGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPE--EGSYEAQDLINRLL 1073 (1205)
T ss_pred             cCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCcc--ccChhhhhhhhhhh
Confidence            8999999999999999999999999999999999999999999999999999998887776433  33448999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCC-CCCCCCCCCc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRR-QKTMPFPDQK  440 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~  440 (451)
                      ..+|.+|..+.. +.++..|+||+.++|..+.....+++|+..+ +.+..|....
T Consensus      1074 ~~~~~qr~~a~~-~~e~k~~~~~~~~~~~~l~~q~~~~~p~~~s~~dtS~~~~r~ 1127 (1205)
T KOG0606|consen 1074 TEEPTQRLGAKG-AAEVKGHPFFQDVDWENLALQKAEFVPQPESTQDTSYFESRF 1127 (1205)
T ss_pred             ccCchhccCccc-ccccccCCccCCCCccccccccCccCCCCCCCCccchhhccc
Confidence            999999999322 4589999999999999999999999999985 4554444433

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.79  E-value=9.4e-19  Score=158.95  Aligned_cols=132  Identities=23%  Similarity=0.278  Sum_probs=105.7

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH-----HHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-----LEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      .||+|++|.||+|.+.+.           .+++|+.....     ........++..|++++..+.|+++....-++...
T Consensus         1 ~ig~G~~~~vy~~~~~~~-----------~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~   69 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGL-----------KAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP   69 (199)
T ss_pred             CCCCCceEEEEEeecCCc-----------cEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
Confidence            389999999999986442           28999864321     11122345667799999999988766665556667


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +..++||||++|++|.+++.....         .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++.
T Consensus        70 ~~~~lv~e~~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~  137 (199)
T TIGR03724        70 DNKTIVMEYIEGKPLKDVIEEGND---------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGK  137 (199)
T ss_pred             CCCEEEEEEECCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence            778999999999999988755311         7899999999999999999999999999999 8999999999985

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.78  E-value=1.7e-18  Score=180.44  Aligned_cols=138  Identities=23%  Similarity=0.249  Sum_probs=112.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH-----HHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-----LEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ..|...++||+|+||+||+|.+....           +++|+.....     ........++..|+++++.++|++|+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-----------~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p  401 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRD-----------AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTP  401 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCcc-----------ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence            34567889999999999999876543           3444322111     1122234567789999999999999988


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      +.++......++||||++|++|.+++.          ....++.+++.+|.+||++|++||||||+|||+ .++.++|+|
T Consensus       402 ~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liD  470 (535)
T PRK09605        402 VIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLID  470 (535)
T ss_pred             EEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEe
Confidence            887777778899999999999998875          356789999999999999999999999999999 688999999


Q ss_pred             cCccc
Q 013016          235 FDLSL  239 (451)
Q Consensus       235 fg~a~  239 (451)
                      ||++.
T Consensus       471 FGla~  475 (535)
T PRK09605        471 FGLGK  475 (535)
T ss_pred             Ccccc
Confidence            99986

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.78  E-value=1.2e-18  Score=158.18  Aligned_cols=136  Identities=26%  Similarity=0.228  Sum_probs=104.8

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH-------------------HHHHHHHHHHHH
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK-------------------KKVHRAEMEKKI  142 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~  142 (451)
                      |.+.+.||.|+||.||+|.+.. ++         .||||+++.......                   ........|..+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~-g~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   86 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPD-GN---------PVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAA   86 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCC-CC---------EEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHH
Confidence            8888999999999999998753 33         399998764321000                   011224568888


Q ss_pred             HHHCCCCC--ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          143 LKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       143 l~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      +..+.|.+  ++.+++    ....++||||++|++|.++...        .....++.+|+.++.++|+.||+||||||+
T Consensus        87 l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~  154 (198)
T cd05144          87 LKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEF  154 (198)
T ss_pred             HHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcc
Confidence            88888774  445544    2456899999999998765321        345678899999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCccc
Q 013016          221 NVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~  239 (451)
                      ||+++.++.++|+|||.+.
T Consensus       155 Nill~~~~~~~liDfg~~~  173 (198)
T cd05144         155 NILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             cEEEcCCCcEEEEECCccc
Confidence            9999999999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.73  E-value=1.8e-17  Score=148.90  Aligned_cols=136  Identities=26%  Similarity=0.288  Sum_probs=96.0

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHH---------------------HHHHHHHHH
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVH---------------------RAEMEKKIL  143 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~e~~~l  143 (451)
                      .+.||+|+||+||+|.+. +++         .||||+++...........                     ....|...+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~---------~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l   71 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGE---------PVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNL   71 (187)
T ss_pred             CcccccccceeEEEEECC-CCC---------EEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHH
Confidence            467999999999999876 333         3999998754221111111                     113455666


Q ss_pred             HHCCCCC--ccceeEEEEeCCeEEEEEeeccCCchhh-hhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCC
Q 013016          144 KMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKP  219 (451)
Q Consensus       144 ~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp  219 (451)
                      ..+.+.+  +.+.+++    ...++||||++|+.+.. .+....   . ...+..++.+++.++.++|. .||+|+||||
T Consensus        72 ~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p  143 (187)
T cd05119          72 KRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSE  143 (187)
T ss_pred             HHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCCh
Confidence            6664433  4555543    24689999998855432 121110   1 16678899999999999999 9999999999


Q ss_pred             CcEEEccCCCEEEeccCccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +||+++ ++.++|+|||.+.
T Consensus       144 ~Nili~-~~~~~liDfg~a~  162 (187)
T cd05119         144 YNILVD-DGKVYIIDVPQAV  162 (187)
T ss_pred             hhEEEE-CCcEEEEECcccc
Confidence            999999 9999999999985

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.72  E-value=7.8e-17  Score=150.19  Aligned_cols=135  Identities=24%  Similarity=0.266  Sum_probs=101.1

Q ss_pred             eec-cCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH-----H-----HHHHHHHHHHHHHHHHHCCCCCc--cc
Q 013016           87 RIG-AGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-----E-----KKKKVHRAEMEKKILKMLDHPFL--PT  153 (451)
Q Consensus        87 ~LG-~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~-----~~~~~~~~~~e~~~l~~l~h~nI--v~  153 (451)
                      .|| .|+.|+||.+...+.           .++||.+.....     .     ......++.+|+.++.++.|++|  +.
T Consensus        38 ~lg~~~g~gtv~~v~~~~~-----------~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~  106 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTPGV-----------NWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPR  106 (239)
T ss_pred             eeecCCCCccEEEEEeCCc-----------eEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCce
Confidence            466 788888888776532           289998854211     0     11223456779999999998885  67


Q ss_pred             eeEEEEeCC----eEEEEEeeccC-CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          154 LYAEFEASN----FSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       154 l~~~~~~~~----~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      .+++.....    ..++|||+++| .+|.+++..   ..+++.    .+.+|+.+|.+||++||+||||||+|||++.++
T Consensus       107 pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~  179 (239)
T PRK01723        107 PIAARVVRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDG  179 (239)
T ss_pred             eEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC
Confidence            777654332    23699999987 689888765   235544    357899999999999999999999999999999


Q ss_pred             CEEEeccCccc
Q 013016          229 HIMLSDFDLSL  239 (451)
Q Consensus       229 ~~kl~Dfg~a~  239 (451)
                      .++|+|||.+.
T Consensus       180 ~v~LIDfg~~~  190 (239)
T PRK01723        180 KFWLIDFDRGE  190 (239)
T ss_pred             CEEEEECCCcc
Confidence            99999999985

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.69  E-value=1.7e-16  Score=136.46  Aligned_cols=131  Identities=24%  Similarity=0.310  Sum_probs=110.7

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC--CCccceeEEEEeC
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH--PFLPTLYAEFEAS  161 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~nIv~l~~~~~~~  161 (451)
                      +.+.||.|.++.||++...+.           .+++|++.....     ...+..|+.+++.+.|  .+++++++++...
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~-----------~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~   65 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDE-----------DYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESD   65 (155)
T ss_pred             cceecccccccceEEEEecCC-----------eEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Confidence            457899999999999998652           299999875432     3456678999999976  5899999999888


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +..+++|||++|+++..+         +......++.+++.+|++||..   +++|+||+|+||+++..+.++++|||.+
T Consensus        66 ~~~~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~  136 (155)
T cd05120          66 GWSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA  136 (155)
T ss_pred             CccEEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccc
Confidence            899999999988877654         5567778899999999999984   7999999999999999899999999997


Q ss_pred             c
Q 013016          239 L  239 (451)
Q Consensus       239 ~  239 (451)
                      .
T Consensus       137 ~  137 (155)
T cd05120         137 G  137 (155)
T ss_pred             c
Confidence            5

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=2.9e-16  Score=156.91  Aligned_cols=261  Identities=24%  Similarity=0.229  Sum_probs=188.6

Q ss_pred             CceEEeeecc--CCeeEEEEEEe--ccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           81 DFDLHRRIGA--GDIGTVYLCSL--NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        81 ~y~~~~~LG~--G~~g~Vy~~~~--~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      .+.+...+|.  |.+|.||.+..  ....         ..+|+|.-..... .......-.+|....+++ .|+|.++.+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~---------~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~  184 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESP---------HKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDS  184 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCC---------cccccccccCCCC-CccccccccchhhcccccCccccccccC
Confidence            4778889999  99999998876  3332         2488887332211 111122223455556666 499999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeeccCCCCcEEEccC-CCE
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV----ALEYLHMLGIIYRDLKPENVLVRSD-GHI  230 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~----aL~~LH~~givH~Dlkp~NIll~~~-~~~  230 (451)
                      ..++..+..|+-+|+| +.+|..+.+.. +.-++...++.++.+...    ||.++|..+++|-|+||+||++..+ ...
T Consensus       185 ~~~e~~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~  262 (524)
T KOG0601|consen  185 PAWEGSGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSC  262 (524)
T ss_pred             cccccCCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccccee
Confidence            9999999999999999 78888876654 344888999999999999    9999999999999999999999999 789


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +++|||+............                                                  ......-.|..
T Consensus       263 ~~~df~~v~~i~~~~~~~~--------------------------------------------------~~~~~r~~~~~  292 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSV--------------------------------------------------FKVSKRPEGDC  292 (524)
T ss_pred             ecCCcceeEEccCCccccc--------------------------------------------------eeeeecCCCCc
Confidence            9999999753322110000                                                  00001114667


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP--SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      .|++||.+.+ -++...|||++|.++.+..+|..+....  +.+..+..+.     ++.+....... .+...+..|+..
T Consensus       293 ~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip~e~~~~~s~-~l~~~~~~~~d~  365 (524)
T KOG0601|consen  293 IYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----IPLEFCEGGSS-SLRSVTSQMLDE  365 (524)
T ss_pred             eEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----CchhhhcCcch-hhhhHHHHhcCc
Confidence            7999998866 6788999999999999999887766543  3333322222     23333322222 566699999999


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +|-.|++    ++.+++|++..+...
T Consensus       366 ~~~~~~~----~q~~~~l~~i~s~~~  387 (524)
T KOG0601|consen  366 DPRLRLT----AQILTALNVIHSKLF  387 (524)
T ss_pred             chhhhhH----HHHHhccccccchhh
Confidence            9999999    999999999987433

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=8.1e-15  Score=135.84  Aligned_cols=210  Identities=20%  Similarity=0.252  Sum_probs=147.7

Q ss_pred             HHHCCCCCccceeEEEEeCC-----eEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC--Ce
Q 013016          143 LKMLDHPFLPTLYAEFEASN-----FSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLG--II  213 (451)
Q Consensus       143 l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g--iv  213 (451)
                      +-.+.|-|||+++.++.+.+     ...++.||+.-|+|..+|++.+  ...+.....++|+-||+.||.|||+..  |+
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            44567999999998886544     5789999999999999987643  355888899999999999999999875  99


Q ss_pred             eccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcc
Q 013016          214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL  293 (451)
Q Consensus       214 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (451)
                      |+++..+-|++..+|-+|+.--....                          .+.+-...                    
T Consensus       201 hgnlTc~tifiq~ngLIkig~~ap~s--------------------------~h~s~~~~--------------------  234 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIGSVAPDS--------------------------THPSVNST--------------------  234 (458)
T ss_pred             cCCcchhheeecCCceEEecccCccc--------------------------cchhhhhh--------------------
Confidence            99999999999999888765321110                          00000000                    


Q ss_pred             cccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHhcCCCCCCCCCCCC
Q 013016          294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQSPSS  372 (451)
Q Consensus       294 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~  372 (451)
                           ....+..-.|-++|.+||.-.....+-++|||+||....+|..|..- -...+..+.-..+.+........    
T Consensus       235 -----~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~----  305 (458)
T KOG1266|consen  235 -----REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENG----  305 (458)
T ss_pred             -----hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCc----
Confidence                 00000011456789999976655667799999999999999887764 22222222222222222211111    


Q ss_pred             cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       373 ~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                          .-++++.+||+-.|..||+    +++++.||.+-+++--
T Consensus       306 ----lqr~~i~kcl~~eP~~rp~----ar~llfHpllfeVhsl  340 (458)
T KOG1266|consen  306 ----LQRGSITKCLEGEPNGRPD----ARLLLFHPLLFEVHSL  340 (458)
T ss_pred             ----cccCcCcccccCCCCCCcc----hhhhhcCceeeecchH
Confidence                2256889999999999999    9999999999987653

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.52  E-value=6.4e-14  Score=141.73  Aligned_cols=146  Identities=21%  Similarity=0.277  Sum_probs=98.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH--------------------------
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK--------------------------  131 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------  131 (451)
                      .+..|. .+-||.|++|.||+|+++++.          .||||+.+......-.                          
T Consensus       116 ~F~~fd-~~plasaSigQVh~A~l~~G~----------~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~  184 (437)
T TIGR01982       116 LFAEFE-EKPLAAASIAQVHRARLVDGK----------EVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPT  184 (437)
T ss_pred             HHhhCC-CcceeeeehhheEEEEecCCC----------EEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHH
Confidence            334454 357999999999999987553          3999998654211000                          


Q ss_pred             -H----------HHHHHHHHHHHHHC----CC-CC--ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHH
Q 013016          132 -K----------VHRAEMEKKILKML----DH-PF--LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA  193 (451)
Q Consensus       132 -~----------~~~~~~e~~~l~~l----~h-~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~  193 (451)
                       .          .-++..|+..+.++    .| ++  |++++.  ...+..+|||||++|++|.++......+ .   ..
T Consensus       185 ~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~---~~  258 (437)
T TIGR01982       185 EVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAG-L---DR  258 (437)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcC-C---CH
Confidence             0          00133455555544    23 33  233332  2234579999999999999876542211 2   23


Q ss_pred             HHHHHHHHH-HHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          194 RFYAAEVLV-ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       194 ~~i~~qil~-aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ..++.+++. .+..+|..|++|+|+||.||+++.+|+++|+|||++..
T Consensus       259 ~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~  306 (437)
T TIGR01982       259 KALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGR  306 (437)
T ss_pred             HHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence            456666665 47889999999999999999999999999999999753

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.50  E-value=2.2e-13  Score=137.62  Aligned_cols=112  Identities=19%  Similarity=0.214  Sum_probs=91.6

Q ss_pred             EEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHH
Q 013016          117 YAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY  196 (451)
Q Consensus       117 vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i  196 (451)
                      |.|.+......   .......+-++-|+.++||||+++++.++..+++|||+|-+  ..|..++++.     ....+.-.
T Consensus        40 vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l-----~~~~v~~G  109 (690)
T KOG1243|consen   40 VSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL-----GKEEVCLG  109 (690)
T ss_pred             eEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh-----HHHHHHHH
Confidence            55555543321   33344555678899999999999999999999999999987  4566677663     46667778


Q ss_pred             HHHHHHHHHHHH-HCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       197 ~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +.||+.||.||| +.+++|++|.-+-|+|+..|..||++|.++
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v  152 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELV  152 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence            999999999998 688999999999999999999999999886

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.48  E-value=2.6e-14  Score=146.33  Aligned_cols=152  Identities=18%  Similarity=0.236  Sum_probs=96.8

Q ss_pred             CCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH----------------------
Q 013016           72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----------------------  129 (451)
Q Consensus        72 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------  129 (451)
                      +......+.+|+. +-||.|++|.||+|+++.+++.         ||||+.+......                      
T Consensus       112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~---------VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~  181 (537)
T PRK04750        112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGRE---------VVVKVLRPDILPVIDADLALMYRLARWVERLLPDG  181 (537)
T ss_pred             CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCE---------EEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            3333445667887 7899999999999999874443         9999998553110                      


Q ss_pred             -----H----HHHHH------HHHHHHHHHHC----CCCCccceeEEEE-eCCeEEEEEeeccCCchhhhhhhCCCC---
Q 013016          130 -----K----KKVHR------AEMEKKILKML----DHPFLPTLYAEFE-ASNFSCIVMEFCSGGDLHSLRHKQPHK---  186 (451)
Q Consensus       130 -----~----~~~~~------~~~e~~~l~~l----~h~nIv~l~~~~~-~~~~~~lV~E~~~ggsL~~~l~~~~~~---  186 (451)
                           .    +....      +.+|+..+.++    .+.+.+.+-.++. -....+|||||+.|+.|.++..-...+   
T Consensus       182 ~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~  261 (537)
T PRK04750        182 RRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDM  261 (537)
T ss_pred             ccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCH
Confidence                 0    11111      23344333333    2333333333332 245678999999999998753211111   


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEEeccCcccc
Q 013016          187 -RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLSLC  240 (451)
Q Consensus       187 -~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl~Dfg~a~~  240 (451)
                       .+....+..++.|+       ...|++|+|+||.||+++.+|    +++++|||+...
T Consensus       262 ~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~  313 (537)
T PRK04750        262 KLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS  313 (537)
T ss_pred             HHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence             23333344444444       358999999999999999888    999999999743

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.44  E-value=3.8e-13  Score=118.59  Aligned_cols=127  Identities=23%  Similarity=0.300  Sum_probs=94.3

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEeCCe
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEASNF  163 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~~~~  163 (451)
                      ++.|+.|.++.||++...+.           .|++|+......    ....+..|+.+++.+.+.++ ++++.+..  ..
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~-----------~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~   65 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANK-----------KYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ET   65 (170)
T ss_pred             eeecCCcccCceEEEEECCe-----------EEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CC
Confidence            45689999999999986532           299999864421    12234568888888865554 45665443  34


Q ss_pred             EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeccCCCCcEEEccCCCEEEeccCcc
Q 013016          164 SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGI-----IYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       164 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi-----vH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .++|||+++|.++.+.  .     .   ....++.+++.+|+.||..++     +|+|++|.||+++ ++.++++|||.+
T Consensus        66 ~~lv~e~i~G~~l~~~--~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a  134 (170)
T cd05151          66 GVLITEFIEGSELLTE--D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA  134 (170)
T ss_pred             CeEEEEecCCCccccc--c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence            5799999999887643  0     1   123456889999999999885     9999999999999 778999999997


Q ss_pred             c
Q 013016          239 L  239 (451)
Q Consensus       239 ~  239 (451)
                      .
T Consensus       135 ~  135 (170)
T cd05151         135 G  135 (170)
T ss_pred             c
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.42  E-value=2.9e-12  Score=114.60  Aligned_cols=144  Identities=19%  Similarity=0.166  Sum_probs=99.3

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----------------------HHHHHHHHHHHHHH
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----------------------KKKKVHRAEMEKKI  142 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~e~~~  142 (451)
                      ..||.|--+.||.|.......   +...+..+|||+.+-....                       ........+.|...
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~---~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~   79 (197)
T cd05146           3 GCISTGKESVVLHANGGSNET---EQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHN   79 (197)
T ss_pred             CccccCcceEEEEEecCcccc---cccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHH
Confidence            468999999999997543100   0001124999998532110                       00112223478999


Q ss_pred             HHHCCC--CCccceeEEEEeCCeEEEEEeeccCCchhh-hhhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCC
Q 013016          143 LKMLDH--PFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALEYL-HMLGIIYRDLK  218 (451)
Q Consensus       143 l~~l~h--~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~givH~Dlk  218 (451)
                      |+++..  -+++.++++    ...+|||||+.+..+.. .+..   ..++......+..+++.+|..| |+.||||+||+
T Consensus        80 L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs  152 (197)
T cd05146          80 LKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS  152 (197)
T ss_pred             HHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            998853  567777765    45689999996543321 2222   2355667788899999999998 89999999999


Q ss_pred             CCcEEEccCCCEEEeccCcccc
Q 013016          219 PENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       219 p~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      +.|||+. ++.+.|+|||.+..
T Consensus       153 ~~NIL~~-~~~v~iIDF~qav~  173 (197)
T cd05146         153 EYNMLWH-DGKVWFIDVSQSVE  173 (197)
T ss_pred             HHHEEEE-CCcEEEEECCCcee
Confidence            9999997 57899999999854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.38  E-value=2.9e-13  Score=135.57  Aligned_cols=254  Identities=20%  Similarity=0.228  Sum_probs=178.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      .....+|..+..||.|.|+.|+.+..+.        +++..|++|-..+.......... -..|+.+...+ .|.+++..
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~--------~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~  331 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRP--------EGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGK  331 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecC--------CCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCC
Confidence            3445689999999999999999876331        22335888887665443333222 23355555555 58999998


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEEe
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLS  233 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl~  233 (451)
                      +..+......|+--|||.++++...+..  ...+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.
T Consensus       332 ~~~W~~~r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~  409 (524)
T KOG0601|consen  332 NSSWSQLRQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLG  409 (524)
T ss_pred             CCCccccccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcc
Confidence            8888888888899999999988765422  2447888999999999999999999999999999999999986 788899


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||....+.                                                          .....+.+.-.++
T Consensus       410 ~~~~~t~~~----------------------------------------------------------~~~~~~~~~~r~~  431 (524)
T KOG0601|consen  410 DFGCWTRLA----------------------------------------------------------FSSGVFHHIDRLY  431 (524)
T ss_pred             ccccccccc----------------------------------------------------------eeccccccccccc
Confidence            999863100                                                          0000112223344


Q ss_pred             --CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          314 --SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       314 --aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                        +++......+..++|++|||.-+.+.++|...-.....   ...+..+.......    .. .++..+.+.++..++.
T Consensus       432 p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~~~~----~~-~~~q~~~kv~~~~~~~  503 (524)
T KOG0601|consen  432 PIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPNLPG----LK-LQLQVLLKVMINPDRK  503 (524)
T ss_pred             ccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccCCCc----hH-HhhhhhhhhhcCCccc
Confidence              44444455678899999999999999998775443222   22233332221111    11 3788999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcC
Q 013016          392 NRLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~  410 (451)
                      .|+.    +.++..|.=|.
T Consensus       504 ~~~l----~~~l~~~~~~~  518 (524)
T KOG0601|consen  504 RRPS----AVELSLHSEFY  518 (524)
T ss_pred             cchh----hhhhcccchhh
Confidence            9999    88888776543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=1.1e-11  Score=107.29  Aligned_cols=135  Identities=24%  Similarity=0.240  Sum_probs=99.8

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcc-----hHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN-----KEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      .+++|+-+.+|.+.+.+..           +++|.=.     .......-...+..+|+.++.++.--.|...+=++.+.
T Consensus         3 ~i~~GAEa~i~~~~~~g~~-----------av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~   71 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLP-----------AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP   71 (204)
T ss_pred             hhhCCcceeEEeeeccCcc-----------eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC
Confidence            4788999999988664432           4555332     22223333445567799999988765665555556667


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +...|+|||++|..|.+++...         ...++..+-.-+.-||.+||||+||+++||++..++ +.++|||++...
T Consensus        72 ~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642          72 DNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             CCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            7778999999999998888765         245677788888899999999999999999998665 999999998644


Q ss_pred             C
Q 013016          242 N  242 (451)
Q Consensus       242 ~  242 (451)
                      +
T Consensus       142 ~  142 (204)
T COG3642         142 D  142 (204)
T ss_pred             c
Confidence            3

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.35  E-value=1.8e-11  Score=105.49  Aligned_cols=148  Identities=24%  Similarity=0.214  Sum_probs=108.8

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEE-----EcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMK-----VVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK-----~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ....|-+|+-+.|+++.+.+..           ..||     ..+.......-...+...|+.++.++.--.|.-..=+|
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~-----------~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~   79 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEA-----------AIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF   79 (229)
T ss_pred             cceeeeccceeeEeeeccCCce-----------eEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence            5667889999999999876543           3444     33333333334455667799999988765665544556


Q ss_pred             EeCCeEEEEEeeccC-CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CEEEec
Q 013016          159 EASNFSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLSD  234 (451)
Q Consensus       159 ~~~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~kl~D  234 (451)
                      .+...-+|+|||++| .++.+++...-...........++++|-..+.-||.++|||+||..+||++..+|   .+.|+|
T Consensus        80 ~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lId  159 (229)
T KOG3087|consen   80 IDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILID  159 (229)
T ss_pred             EecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEe
Confidence            666667899999966 3777877665444444444478899999999999999999999999999998765   458999


Q ss_pred             cCcccccC
Q 013016          235 FDLSLCSN  242 (451)
Q Consensus       235 fg~a~~~~  242 (451)
                      ||++....
T Consensus       160 fgls~~s~  167 (229)
T KOG3087|consen  160 FGLSSVSR  167 (229)
T ss_pred             ecchhccc
Confidence            99986543

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.31  E-value=1e-12  Score=133.39  Aligned_cols=171  Identities=21%  Similarity=0.310  Sum_probs=119.7

Q ss_pred             HHHHHHHHHH-HCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhc
Q 013016          199 EVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLN  277 (451)
Q Consensus       199 qil~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (451)
                      +++.||.|+| +.++||++|.|++|.++..|.+||+.|+++......-.                               
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~-------------------------------  155 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE-------------------------------  155 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc-------------------------------
Confidence            3449999999 57899999999999999999999999998743221000                               


Q ss_pred             cccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCChHHHHH
Q 013016          278 RFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLR  356 (451)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell-tg~~pf~~~~~~~~~~  356 (451)
                                     ............-..-...|.|||++.+...+.++|+||+||++|.+. .|+..+...+.... .
T Consensus       156 ---------------~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~  219 (700)
T KOG2137|consen  156 ---------------YPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-Y  219 (700)
T ss_pred             ---------------cccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcch-h
Confidence                           000001111111123456799999999977899999999999999999 56666655433322 2


Q ss_pred             HHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccccccc
Q 013016          357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL  420 (451)
Q Consensus       357 ~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~  420 (451)
                      ..................+.++++-|.++|..++..||+    +.+++.-|||+.-..+.++.+
T Consensus       220 ~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrfL  279 (700)
T KOG2137|consen  220 SFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT----LDLLLSIPFFSDPGLKALRFL  279 (700)
T ss_pred             hhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcc----hhhhhcccccCCchhhhhhhc
Confidence            222222222332333344459999999999999999999    999999999999666655443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.25  E-value=4.9e-11  Score=109.75  Aligned_cols=139  Identities=22%  Similarity=0.266  Sum_probs=104.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC--CCccceeEEEEeC--
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH--PFLPTLYAEFEAS--  161 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~nIv~l~~~~~~~--  161 (451)
                      +.||.|..+.||++...++.          .+++|+.......  .....+..|.++++.+.+  ..+++++.+....  
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~----------~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~   71 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGR----------RLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV   71 (223)
T ss_pred             eecCCCccceEEEEEecCCc----------ceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc
Confidence            46899999999999875422          2999998754221  123456779999999876  4467788877654  


Q ss_pred             -CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 013016          162 -NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-------------------------------  209 (451)
Q Consensus       162 -~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-------------------------------  209 (451)
                       +..++||||++|.+|.+.+..   ..+++.....++.+++.+|..||+                               
T Consensus        72 ~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (223)
T cd05154          72 LGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDA  148 (223)
T ss_pred             cCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHh
Confidence             367899999999988775432   236777777788888888888873                               


Q ss_pred             -------------------------CCCeeccCCCCcEEEcc--CCCEEEeccCccc
Q 013016          210 -------------------------LGIIYRDLKPENVLVRS--DGHIMLSDFDLSL  239 (451)
Q Consensus       210 -------------------------~givH~Dlkp~NIll~~--~~~~kl~Dfg~a~  239 (451)
                                               ..++|+|+++.||+++.  ++.+.|+||+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         149 SRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             hcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                                     23699999999999998  5678999999874

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.17  E-value=6.4e-10  Score=109.65  Aligned_cols=213  Identities=16%  Similarity=0.169  Sum_probs=150.1

Q ss_pred             CeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE----eCCeEEEE
Q 013016           92 DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE----ASNFSCIV  167 (451)
Q Consensus        92 ~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~----~~~~~~lV  167 (451)
                      -..+.|+|+.+-++.         .|++|.+.........   ....-+++++++.|.|||++.++|.    .+..+++|
T Consensus       288 ~~~Ttyk~~s~~DG~---------~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~Slvlv  355 (655)
T KOG3741|consen  288 FSITTYKATSNVDGN---------AYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLV  355 (655)
T ss_pred             ccceeEeeeeccCCc---------eeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEE
Confidence            456889998877765         3999999433222221   2222467899999999999999886    34478999


Q ss_pred             EeeccC-CchhhhhhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          168 MEFCSG-GDLHSLRHKQP-------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       168 ~E~~~g-gsL~~~l~~~~-------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      |+|.++ ++|.++.....             +...++..+|.++.||..||.++|+.|+.-+-|.+.+||++.+.+++|.
T Consensus       356 YDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS  435 (655)
T KOG3741|consen  356 YDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRIS  435 (655)
T ss_pred             EecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEe
Confidence            999876 46777544321             2347899999999999999999999999999999999999998889988


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      ..|+......                                                                      
T Consensus       436 ~C~i~Dvl~~----------------------------------------------------------------------  445 (655)
T KOG3741|consen  436 GCGIMDVLQE----------------------------------------------------------------------  445 (655)
T ss_pred             cccceeeecC----------------------------------------------------------------------
Confidence            8776421110                                                                      


Q ss_pred             Cc-ccccCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SP-EVASGGSHGNAVDWWAFGIFIYEMIYGRTP-FAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aP-E~~~~~~~~~~~DIwSlG~il~elltg~~p-f~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      -| |-+.+   -.+-|.=.||.+++.|.||..- +........ +..|..            .++.+++++|.-+...++
T Consensus       446 d~~~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~------------~yS~D~rn~v~yl~s~~~  510 (655)
T KOG3741|consen  446 DPTEPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITT------------TYSTDLRNVVEYLESLNF  510 (655)
T ss_pred             CCCcchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhh------------hhhHHHHHHHHHHHhcCc
Confidence            01 11212   2356888999999999999654 222222222 233222            233488899999999888


Q ss_pred             CCcCCCCCChHHHHcC
Q 013016          391 CNRLGSKRGAADVKTH  406 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~h  406 (451)
                      ++ .+    +.+++.|
T Consensus       511 ~~-ks----I~~llp~  521 (655)
T KOG3741|consen  511 RE-KS----IQDLLPM  521 (655)
T ss_pred             cc-cc----HHHHHHH
Confidence            86 45    7777754

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.16  E-value=2.6e-10  Score=101.69  Aligned_cols=99  Identities=28%  Similarity=0.338  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHCCCC--CccceeEEEEeCCeEEEEEeecc--CCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHH-H
Q 013016          133 VHRAEMEKKILKMLDHP--FLPTLYAEFEASNFSCIVMEFCS--GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY-L  207 (451)
Q Consensus       133 ~~~~~~e~~~l~~l~h~--nIv~l~~~~~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~-L  207 (451)
                      ..+..+|.+.|.++..-  ++++++++.    ..+|||||+.  |..+..+....    ++......++.+++..+.. +
T Consensus        52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~  123 (188)
T PF01163_consen   52 REWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKML  123 (188)
T ss_dssp             HHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHH
Confidence            34467799999999765  567777553    3479999997  66665544332    2245567788888886665 5


Q ss_pred             HHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      |..||+|+||++.|||++.+ .+.|+|||.+..
T Consensus       124 ~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  124 HKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVD  155 (188)
T ss_dssp             HCTTEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred             HhcCceecCCChhhEEeecc-eEEEEecCccee
Confidence            79999999999999999977 999999999853

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.14  E-value=9.5e-10  Score=103.82  Aligned_cols=104  Identities=19%  Similarity=0.080  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHCCCCCc--cceeEEEEe-----CCeEEEEEeeccCC-chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 013016          136 AEMEKKILKMLDHPFL--PTLYAEFEA-----SNFSCIVMEFCSGG-DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL  207 (451)
Q Consensus       136 ~~~e~~~l~~l~h~nI--v~l~~~~~~-----~~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L  207 (451)
                      ..+|...+.++..-+|  +.++.+++.     ....+||||++++. +|.+++........+......++.+++..+.-|
T Consensus        75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L  154 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM  154 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            5678888888855454  444556543     23578999999776 799888643334456778889999999999999


Q ss_pred             HHCCCeeccCCCCcEEEcc-------CCCEEEeccCccc
Q 013016          208 HMLGIIYRDLKPENVLVRS-------DGHIMLSDFDLSL  239 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~-------~~~~kl~Dfg~a~  239 (451)
                      |++||+|+|+++.|||++.       ++.+.|+||+.+.
T Consensus       155 H~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        155 HAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9999999999999999985       4689999999874

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.91  E-value=5.3e-08  Score=87.80  Aligned_cols=137  Identities=18%  Similarity=0.221  Sum_probs=92.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHH------HHHHHHHHHC---CCCC
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA------EMEKKILKML---DHPF  150 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~------~~e~~~l~~l---~h~n  150 (451)
                      ++|.+.+.+-......|.+-...+..           +++|..+.+.......+..+      .+.+..+.++   ..-.
T Consensus        31 ~~~~~~kv~k~~~r~~ValIei~~~k-----------yIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~   99 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIEIDGKK-----------YILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTE   99 (229)
T ss_pred             CCceEEEeecCCCccEEEEEEECCcE-----------EEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccc
Confidence            67999999999888888877655532           99999986644333332222      1222323333   2233


Q ss_pred             ccceeEEEE-----eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          151 LPTLYAEFE-----ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       151 Iv~l~~~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      +..++.+.+     .....+|||||++|..|.++..      +++    .+...|..++.-||+.|++|+|.+|.|++++
T Consensus       100 ~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~  169 (229)
T PF06176_consen  100 PADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS  169 (229)
T ss_pred             cccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE
Confidence            333333332     2235679999999998877632      232    2445677889999999999999999999999


Q ss_pred             cCCCEEEeccCcc
Q 013016          226 SDGHIMLSDFDLS  238 (451)
Q Consensus       226 ~~~~~kl~Dfg~a  238 (451)
                      .+ .++++||+..
T Consensus       170 ~~-~i~iID~~~k  181 (229)
T PF06176_consen  170 NN-GIRIIDTQGK  181 (229)
T ss_pred             CC-cEEEEECccc
Confidence            54 5999999875

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.90  E-value=1.2e-08  Score=93.91  Aligned_cols=137  Identities=25%  Similarity=0.266  Sum_probs=101.5

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-------------------HHHHHHHHHHHHH
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-------------------KKKVHRAEMEKKI  142 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------~~~~~~~~~e~~~  142 (451)
                      +.+..+||.|--+.||.|.+....+          +|||.=+-....-                   .-.....++|.++
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~----------~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~  162 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRK----------VAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEA  162 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCE----------EEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHH
Confidence            5577899999999999999875543          8999654221110                   0012234668889


Q ss_pred             HHHCCCC--CccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          143 LKMLDHP--FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       143 l~~l~h~--nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      |.+|.-.  .+++.+++    +..++|||++.|-.|...-       +.......++..|+.-+.-+-..|+||+|+++=
T Consensus       163 L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSef  231 (304)
T COG0478         163 LQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEF  231 (304)
T ss_pred             HHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchh
Confidence            9998755  67777764    5678999999987776532       234455566667777777777999999999999


Q ss_pred             cEEEccCCCEEEeccCccc
Q 013016          221 NVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~  239 (451)
                      ||++++||.+.++||-.+.
T Consensus       232 NIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         232 NILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             eEEEecCCCEEEEeCcccc
Confidence            9999999999999998764

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.87  E-value=8.7e-08  Score=92.64  Aligned_cols=238  Identities=19%  Similarity=0.253  Sum_probs=151.6

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE-----
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE-----  157 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~-----  157 (451)
                      ..+-||+|+-+.+|..-.-.+            -+.||..+.......  +    .++.|... .||-+-.=+.|     
T Consensus        15 ~gr~LgqGgea~ly~l~e~~d------------~VAKIYh~Pppa~~a--q----k~a~la~~p~~p~~~~rvaWPqa~L   76 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEVRD------------QVAKIYHAPPPAAQA--Q----KVAELAATPDAPLLNYRVAWPQATL   76 (637)
T ss_pred             CCccccCCccceeeecchhhc------------hhheeecCCCchHHH--H----HHHHhccCCCCcchhhhhcccHHHh
Confidence            456799999999995432222            355887655332211  1    23333333 56654331111     


Q ss_pred             -EEe-CCeEEEEEeeccCCc-hhhhhh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          158 -FEA-SNFSCIVMEFCSGGD-LHSLRH----KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       158 -~~~-~~~~~lV~E~~~ggs-L~~~l~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                       ... ....-+.|+.+.|.. +.+++.    ++....+.|.-+.+.++.|+.+.+-||..|-+-+|+.++|+|+.+++.+
T Consensus        77 ~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V  156 (637)
T COG4248          77 HGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKV  156 (637)
T ss_pred             hCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceE
Confidence             112 223678888887652 333322    2223447899999999999999999999999999999999999999999


Q ss_pred             EEeccCcc-cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          231 MLSDFDLS-LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       231 kl~Dfg~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      .|+|=..- .+.+                                                         ......-+|.
T Consensus       157 ~LVdsDsfqi~~n---------------------------------------------------------g~~~~cpVg~  179 (637)
T COG4248         157 VLVDSDSFQINAN---------------------------------------------------------GTLHLCPVGV  179 (637)
T ss_pred             EEEcccceeeccC---------------------------------------------------------CceEecccCc
Confidence            99974210 0000                                                         0001112788


Q ss_pred             CCccCccccc-----CCCCCcchhHHHHHHHHHHHHhC-CCCCCCC-------ChHH-HH--------HHHhcCCCCCCC
Q 013016          310 HEYVSPEVAS-----GGSHGNAVDWWAFGIFIYEMIYG-RTPFAAP-------SNET-TL--------RNIVKKPLTFPT  367 (451)
Q Consensus       310 ~~y~aPE~~~-----~~~~~~~~DIwSlG~il~elltg-~~pf~~~-------~~~~-~~--------~~i~~~~~~~~~  367 (451)
                      ..|.+||...     |..-+...|.|-||++|++||.| +-||.+.       +..+ .+        .+-..+..+.|.
T Consensus       180 ~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~  259 (637)
T COG4248         180 SEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPR  259 (637)
T ss_pred             cccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCC
Confidence            9999999864     23346789999999999999986 9999752       2222 11        111112334444


Q ss_pred             CCCCCcChHHHHHHHHHhcccC--cCCcCCC
Q 013016          368 QSPSSMSEYHARDLISGLLNKD--PCNRLGS  396 (451)
Q Consensus       368 ~~~~~~~~~~~~~ll~~~L~~d--P~~Rpt~  396 (451)
                      .++-.+.+..+..|..+|++.-  +.-|||+
T Consensus       260 ~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a  290 (637)
T COG4248         260 SIPLSMLPPDVQALFQQAFTESGVATPRPTA  290 (637)
T ss_pred             CCChhhcCHHHHHHHHHHhcccCCCCCCCCH
Confidence            5555556668899999999853  5689994

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.85  E-value=3e-08  Score=90.43  Aligned_cols=103  Identities=28%  Similarity=0.294  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHCCCCC--ccceeEEEEeCC----eEEEEEeeccCC-chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 013016          135 RAEMEKKILKMLDHPF--LPTLYAEFEASN----FSCIVMEFCSGG-DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL  207 (451)
Q Consensus       135 ~~~~e~~~l~~l~h~n--Iv~l~~~~~~~~----~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L  207 (451)
                      +..+|...+..+..-+  .++.+++.+...    ..+||+|+++|. +|.+++.....  .+......++.+++..++-|
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHHH
Confidence            4556777777775444  566677666532    468999999874 79998876433  66777889999999999999


Q ss_pred             HHCCCeeccCCCCcEEEccCC---CEEEeccCccc
Q 013016          208 HMLGIIYRDLKPENVLVRSDG---HIMLSDFDLSL  239 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~~~---~~kl~Dfg~a~  239 (451)
                      |++||+|+|+++.|||++.++   .+.|+||+.+.
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~  169 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR  169 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence            999999999999999999887   89999999874

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.80  E-value=5.7e-08  Score=87.28  Aligned_cols=139  Identities=14%  Similarity=0.101  Sum_probs=97.2

Q ss_pred             ccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH---HHHHHHHHHHHHHHHHCCCCC--ccceeEEEE-eC-
Q 013016           89 GAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK---KKKVHRAEMEKKILKMLDHPF--LPTLYAEFE-AS-  161 (451)
Q Consensus        89 G~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~~~-~~-  161 (451)
                      |.||-+.|+.....+.           .+=||.-.......   +.....+.+|...+.++..-+  ++++. ++. .. 
T Consensus        27 ~rgG~SgV~r~~~~g~-----------~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~   94 (216)
T PRK09902         27 RRNGMSGVQCVERNGK-----------KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKI   94 (216)
T ss_pred             CCCCcceEEEEEeCCc-----------EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeecc
Confidence            4577777877654433           26666554111111   122345667888888885433  45555 332 11 


Q ss_pred             ---CeEEEEEeeccC-CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC--EEEecc
Q 013016          162 ---NFSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--IMLSDF  235 (451)
Q Consensus       162 ---~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~Df  235 (451)
                         -..+||+|-+.| .+|.+++....-.+.+......++.+++..+.-||+.|+.|+|+.+.|||++.+|.  ++++||
T Consensus        95 ~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDl  174 (216)
T PRK09902         95 EGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDL  174 (216)
T ss_pred             CCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEh
Confidence               257899998843 58888876654445678888899999999999999999999999999999987777  999999


Q ss_pred             Cccc
Q 013016          236 DLSL  239 (451)
Q Consensus       236 g~a~  239 (451)
                      ..+.
T Consensus       175 Ek~r  178 (216)
T PRK09902        175 EKSR  178 (216)
T ss_pred             hccc
Confidence            8763

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.69  E-value=4.3e-07  Score=82.85  Aligned_cols=134  Identities=25%  Similarity=0.247  Sum_probs=93.2

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---------------------HHHHHHHHHHHHHHH
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---------------------KKVHRAEMEKKILKM  145 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------~~~~~~~~e~~~l~~  145 (451)
                      .|..|--+.||+|......          .+|+|+++.....-.                     ....+...|..-|++
T Consensus        55 ~istGKEA~Vy~a~~~~~~----------~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R  124 (268)
T COG1718          55 CISTGKEANVYLAETGDGR----------YVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKR  124 (268)
T ss_pred             eecCCcceEEEeeccCCCc----------eEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            5667777889998764332          399999975433211                     123334557777777


Q ss_pred             CC--CCCccceeEEEEeCCeEEEEEeeccCCchhh--hhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCC
Q 013016          146 LD--HPFLPTLYAEFEASNFSCIVMEFCSGGDLHS--LRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPE  220 (451)
Q Consensus       146 l~--h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~--~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~  220 (451)
                      +.  +-.+++-+.+..    -.|||||+ |....-  .|.   ...+....+..+..++++.+.-|-. .|+||+||+.=
T Consensus       125 ~~eAGVrvP~Pi~~~~----nVLvMEfI-g~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEy  196 (268)
T COG1718         125 AYEAGVRVPEPIAFRN----NVLVMEFI-GDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEY  196 (268)
T ss_pred             HHHcCCCCCCceeecC----CeEEEEec-cCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhh
Confidence            73  555666666553    36999999 433110  111   1223444688889999999998887 99999999999


Q ss_pred             cEEEccCCCEEEeccCccc
Q 013016          221 NVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~  239 (451)
                      |||+. ++.+.++|||.|.
T Consensus       197 NiL~~-~~~p~iID~~QaV  214 (268)
T COG1718         197 NILVH-DGEPYIIDVSQAV  214 (268)
T ss_pred             heEEE-CCeEEEEECcccc
Confidence            99999 8899999999984

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.64  E-value=3.7e-07  Score=84.44  Aligned_cols=139  Identities=27%  Similarity=0.361  Sum_probs=82.3

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC--CccceeEEEE---
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP--FLPTLYAEFE---  159 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--nIv~l~~~~~---  159 (451)
                      ++.|+.|..+.||++...+ ++          +++|+....     .....+..|..+++.+...  .+++++....   
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~----------~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~   65 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GR----------YVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDE   65 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SE----------EEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETE
T ss_pred             CccCCCCCeeeEEEEEECC-cE----------EEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccc
Confidence            4679999999999998776 32          999998754     2334455678888777533  3567776443   


Q ss_pred             eCCeEEEEEeeccCCchhh----------------hh---hhC--CCCCCCHHH---------HHHH------------H
Q 013016          160 ASNFSCIVMEFCSGGDLHS----------------LR---HKQ--PHKRFSLTS---------ARFY------------A  197 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~  197 (451)
                      .....+++|++++|..+..                .+   +..  ....+....         ....            .
T Consensus        66 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (239)
T PF01636_consen   66 FNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDL  145 (239)
T ss_dssp             ETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred             ccccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhh
Confidence            3346799999999988776                11   111  111111100         0000            1


Q ss_pred             HHHHH-HHHHHHH-------CCCeeccCCCCcEEEc-cCCCEEEeccCccc
Q 013016          198 AEVLV-ALEYLHM-------LGIIYRDLKPENVLVR-SDGHIMLSDFDLSL  239 (451)
Q Consensus       198 ~qil~-aL~~LH~-------~givH~Dlkp~NIll~-~~~~~kl~Dfg~a~  239 (451)
                      ..+.. .+..+++       ..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  146 EELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            11222 3333332       4599999999999999 66667899999874

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.57  E-value=4e-07  Score=93.17  Aligned_cols=153  Identities=24%  Similarity=0.322  Sum_probs=94.0

Q ss_pred             cCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-------------------
Q 013016           71 FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-------------------  131 (451)
Q Consensus        71 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------  131 (451)
                      ++.+....+.+|.- .-|+.++-|.||+|+++.+.          .|||||.+......-.                   
T Consensus       117 LG~~iee~F~eF~~-~PiAsASIaQVH~A~L~sG~----------~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~  185 (517)
T COG0661         117 LGRPIEELFSEFEP-EPIASASIAQVHRAVLKSGE----------EVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPG  185 (517)
T ss_pred             hCCCHHHHHHHcCC-CchhhhhHhhheeEEecCCC----------EEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            34333344445542 46899999999999999744          3999999754321100                   


Q ss_pred             ------------HHH------HHHHHHHHHHHC-----CCCC--ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCC
Q 013016          132 ------------KVH------RAEMEKKILKML-----DHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK  186 (451)
Q Consensus       132 ------------~~~------~~~~e~~~l~~l-----~h~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~  186 (451)
                                  ..+      ++.+|..-+.++     ..++  |++++  .+-.+.-.|+|||+.|..+.+...... .
T Consensus       186 ~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~--we~t~~~VLtmE~i~Gi~i~d~~~l~~-~  262 (517)
T COG0661         186 GRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVY--WEYTTRRVLTMEWIDGIKISDIAALKS-A  262 (517)
T ss_pred             cccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceee--hhccCCcEEEEEeeCCEecccHHHHHh-c
Confidence                        000      122344444443     1233  23333  233456789999999999998753332 2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       187 ~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++...+.....++.  +..+-..|++|.|.+|.||+++.+|++.+.|||+..
T Consensus       263 g~d~k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g  313 (517)
T COG0661         263 GIDRKELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVG  313 (517)
T ss_pred             CCCHHHHHHHHHHHH--HHHHHhcCccccCCCccceEEecCCcEEEEcCccee
Confidence            355333322222221  222334899999999999999999999999999963

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.56  E-value=7e-07  Score=82.52  Aligned_cols=135  Identities=13%  Similarity=0.115  Sum_probs=83.8

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC--ccceeEEEEeCCe
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF--LPTLYAEFEASNF  163 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~~~~~~~  163 (451)
                      ..||.|..+.||++.   ..+          +++|+.....     ....+.+|.++++.+..-+  +++++++....+.
T Consensus         7 ~~i~~G~t~~~y~~~---~~~----------~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~   68 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGK----------WMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGR   68 (226)
T ss_pred             eeecCCCCcceeEec---CCC----------EEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe
Confidence            468999999999842   111          7899987532     1233566899998886444  5788888888888


Q ss_pred             EEEEEeeccCCc-hhhh---------------------hhhCCCCCCCHHHHHH-HHHH----------HHHH-HHHHH-
Q 013016          164 SCIVMEFCSGGD-LHSL---------------------RHKQPHKRFSLTSARF-YAAE----------VLVA-LEYLH-  208 (451)
Q Consensus       164 ~~lV~E~~~ggs-L~~~---------------------l~~~~~~~l~~~~~~~-i~~q----------il~a-L~~LH-  208 (451)
                      ..+|||+++|.+ +...                     ++..+........... +..+          +... ..+|. 
T Consensus        69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~  148 (226)
T TIGR02172        69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE  148 (226)
T ss_pred             eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence            899999998863 1111                     1111111111111111 1111          1111 12222 


Q ss_pred             ---HCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          209 ---MLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       209 ---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                         ...++|+|+.|.||++++++ +.++||+.+.
T Consensus       149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence               12479999999999999888 9999999874

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.51  E-value=7.2e-09  Score=104.72  Aligned_cols=245  Identities=18%  Similarity=0.178  Sum_probs=163.4

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~~~  160 (451)
                      |...+.+++|+++++++.+.....          +...+++...        .....++++|.+++||| .+..++-++.
T Consensus       244 s~~fh~fvK~altknpKkRptaek----------lL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~  305 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEK----------LLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDG  305 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhh----------heeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCc
Confidence            566677899999999987654433          2446665432        23334788999999999 7777777888


Q ss_pred             CCeEEEEEeeccCC-chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGG-DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+.+++++++.++ +....... ....+..-+...+.+.-+++|++||+.-=+|+|    ||+..+ +..++.||+...
T Consensus       306 E~~~~i~~~i~s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~  379 (829)
T KOG0576|consen  306 EDYLWIPMRICSTGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPP  379 (829)
T ss_pred             ccccchhhhhhcCCccccccCCh-hhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCc
Confidence            88999999999776 22221111 112244455566778888999999988668888    777664 678899998753


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .+...                                                        ....++.+++.++|||+..
T Consensus       380 ~L~~~--------------------------------------------------------~~~~t~~~~~~~~~pev~~  403 (829)
T KOG0576|consen  380 QLTRT--------------------------------------------------------MKPRTAIGTPEPLAPEVIQ  403 (829)
T ss_pred             ccCcc--------------------------------------------------------cccccCCCCCCCCCchhhc
Confidence            22110                                                        0233568999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      .+.+....|+|++|.-..+|--|-+|-..+...  ...+-.+.-.+.......+....-.++...|+...|..|+.    
T Consensus       404 ~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~--~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv----  477 (829)
T KOG0576|consen  404 ENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAV--LPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKV----  477 (829)
T ss_pred             ccccccCCCccCCCcchhhcCCCCCCCCCCccc--cCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcc----
Confidence            999999999999998777777777775542110  00010111000000000011101125788899999999999    


Q ss_pred             hHHHHcCCCcCCC
Q 013016          400 AADVKTHPFFKGL  412 (451)
Q Consensus       400 ~~ell~hp~~~~~  412 (451)
                      ...++.|.+|.+-
T Consensus       478 ~mgacfsKvfngC  490 (829)
T KOG0576|consen  478 HMGACFSKVFNGC  490 (829)
T ss_pred             hhhHHHHHHhccC
Confidence            9999999999983

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.43  E-value=2.1e-06  Score=80.36  Aligned_cols=135  Identities=19%  Similarity=0.111  Sum_probs=82.7

Q ss_pred             eccCCe-eEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEEeCCeEE
Q 013016           88 IGAGDI-GTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFEASNFSC  165 (451)
Q Consensus        88 LG~G~~-g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~~~~~~  165 (451)
                      |..|.+ +.||++...+ .          .+.||+.....      ...+..|+++++.+. +--+++++++....+..+
T Consensus         6 ~~~g~~~~~v~~~~~~~-~----------~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   68 (244)
T cd05150           6 VTEGQSGATVYRLDGKN-P----------GLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAW   68 (244)
T ss_pred             cCCCCCcCeEEEEcCCC-C----------cEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccE
Confidence            444544 7899886543 2          28899986542      233455888887774 445778888887777889


Q ss_pred             EEEeeccCCchhhhh-------------------hhCCCC--CCCHH--HHHHH-----------------------HHH
Q 013016          166 IVMEFCSGGDLHSLR-------------------HKQPHK--RFSLT--SARFY-----------------------AAE  199 (451)
Q Consensus       166 lV~E~~~ggsL~~~l-------------------~~~~~~--~l~~~--~~~~i-----------------------~~q  199 (451)
                      +|||+++|.+|....                   +..+..  ++...  .....                       ..+
T Consensus        69 lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (244)
T cd05150          69 LLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEE  148 (244)
T ss_pred             EEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHH
Confidence            999999998776431                   111111  11100  00000                       111


Q ss_pred             HHHHHHHH----HHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          200 VLVALEYL----HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       200 il~aL~~L----H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ++..|...    ....++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       149 ~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         149 LYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             HHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            11111111    12348999999999999987778899999874

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.40  E-value=2.7e-06  Score=91.87  Aligned_cols=206  Identities=22%  Similarity=0.268  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHCCCCCccceeEEEEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013016          133 VHRAEMEKKILKMLDHPFLPTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH  208 (451)
Q Consensus       133 ~~~~~~e~~~l~~l~h~nIv~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH  208 (451)
                      ....+.|...+.++.|+|++.++.+.....    ...+..|+|.+.++...+...  ...+...++.+..++++||.|+|
T Consensus       226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h  303 (1351)
T KOG1035|consen  226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLH  303 (1351)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHH
Confidence            344455788889999999999999886543    234556788888888777765  55889999999999999999999


Q ss_pred             HCCCeeccCCCC---cEEEccCCCEEEe--ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCc
Q 013016          209 MLGIIYRDLKPE---NVLVRSDGHIMLS--DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSK  283 (451)
Q Consensus       209 ~~givH~Dlkp~---NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (451)
                      +..+.|.-+..+   +-.++.++.+.+.  ||+.+........                                     
T Consensus       304 ~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------------------------------------  346 (1351)
T KOG1035|consen  304 SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------------------------------------  346 (1351)
T ss_pred             HhccceeEEecccccccccCccceeecchhhhcccccCCCccc-------------------------------------
Confidence            997666666555   4444555666655  7776532221100                                     


Q ss_pred             cccccCCCcccccccccccccccccCCCccCcccccCCCCCc--chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC
Q 013016          284 KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN--AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK  361 (451)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  361 (451)
                                         .....-...+.++|......+..  ..|+|.+|.....+..|..+-...   .....++..
T Consensus       347 -------------------~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~---~~~~~~l~~  404 (1351)
T KOG1035|consen  347 -------------------SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS---AVPVSLLDV  404 (1351)
T ss_pred             -------------------chhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc---cchhhhhcc
Confidence                               01113345578888877766544  469999999999999876553321   111111111


Q ss_pred             CCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                                 .......+++.+|+.-++++|+.    +.+++.|+|.+.-..
T Consensus       405 -----------~~~~~~~d~~~~~~~~~~~~Rl~----~~~ll~~~f~~~~~~  442 (1351)
T KOG1035|consen  405 -----------LSTSELLDALPKCLDEDSEERLS----ALELLTHPFLRFPTD  442 (1351)
T ss_pred             -----------ccchhhhhhhhhhcchhhhhccc----hhhhhhchhcccccc
Confidence                       11114678899999999999999    999999999988333

>PLN02876 acyl-CoA dehydrogenase

Probab=98.28  E-value=7.2e-06  Score=90.13  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=57.2

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCc--cceeEEEEe
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFL--PTLYAEFEA  160 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nI--v~l~~~~~~  160 (451)
                      -...|+.|.+..+|+.........       ..+++|+.......  .....+.+|..+++.+. |.+|  ++++.++.+
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~-------~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d  112 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSV-------KRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTD  112 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcc-------eeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecC
Confidence            356789999999999876543210       02778876533211  11235667999999985 6665  788888766


Q ss_pred             C---CeEEEEEeeccCCch
Q 013016          161 S---NFSCIVMEFCSGGDL  176 (451)
Q Consensus       161 ~---~~~~lV~E~~~ggsL  176 (451)
                      .   +..|+||||++|..+
T Consensus       113 ~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876        113 ASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             CCcCCCceEEEEecCCccc
Confidence            4   468999999988653

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.27  E-value=3.4e-06  Score=72.95  Aligned_cols=129  Identities=27%  Similarity=0.332  Sum_probs=94.0

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~  160 (451)
                      ....+.||+|..|.||+|.+.+..           +|+|+-+.+.     ....++.|+++|..+.-.++ .++|.+.++
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~-----------~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~~   87 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGE-----------VALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGED   87 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCce-----------EEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEechh
Confidence            445678999999999999998763           8999987542     33566779999999987775 566665554


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC-CCcEEEccCCCEEEeccCccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLK-PENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlk-p~NIll~~~~~~kl~Dfg~a~  239 (451)
                          ++.|||+.|.+|.++-...     +    .+-+..++++---|-..||-|+.|. |..+++..++.+-|+||..|.
T Consensus        88 ----~i~me~i~G~~L~~~~~~~-----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112          88 ----FIRMEYIDGRPLGKLEIGG-----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             ----hhhhhhhcCcchhhhhhcc-----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence                3559999888887653221     2    2233445666555667899999986 666666667799999999874

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.21  E-value=1.1e-05  Score=82.49  Aligned_cols=139  Identities=22%  Similarity=0.249  Sum_probs=86.9

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH----------------------------HHHHHH--
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----------------------------KKKVHR--  135 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------------~~~~~~--  135 (451)
                      +-||.-+.|.||+|+.+++.          .|||||-+......                            ++..+.  
T Consensus       167 ~piaaASlaQVhrA~L~~G~----------~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~  236 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGE----------DVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP  236 (538)
T ss_pred             chhhhcchhheEEEEecCCC----------EEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence            46899999999999999844          39999986543211                            000011  


Q ss_pred             ----HHHHHHH----HHHCCCCC------ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHH
Q 013016          136 ----AEMEKKI----LKMLDHPF------LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL  201 (451)
Q Consensus       136 ----~~~e~~~----l~~l~h~n------Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil  201 (451)
                          +..|++-    .+.+.|-+      |+++|-.+  ...-.|+||||+|..+.|+..-.. ..++...+..-+.++.
T Consensus       237 ~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~  313 (538)
T KOG1235|consen  237 QELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAY  313 (538)
T ss_pred             hhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHH
Confidence                1223322    22233444      45555322  345789999999998887643332 2366554433333322


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEcc----CCCEEEeccCccc
Q 013016          202 VALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSL  239 (451)
Q Consensus       202 ~aL~~LH~~givH~Dlkp~NIll~~----~~~~kl~Dfg~a~  239 (451)
                      .-  -|=..|++|+|=+|.||+++.    ++.+.+-|||+..
T Consensus       314 ~~--qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~  353 (538)
T KOG1235|consen  314 LE--QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYA  353 (538)
T ss_pred             HH--HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccc
Confidence            11  122568999999999999994    5689999999974

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.17  E-value=4.2e-05  Score=68.38  Aligned_cols=128  Identities=23%  Similarity=0.308  Sum_probs=90.2

Q ss_pred             CCceEEeeeccCCe-eEEEEEEeccccccCCCCCCcceEEEEEcchHHH----------HH--------HHHHHHHHHHH
Q 013016           80 RDFDLHRRIGAGDI-GTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL----------EK--------KKKVHRAEMEK  140 (451)
Q Consensus        80 ~~y~~~~~LG~G~~-g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~----------~~--------~~~~~~~~~e~  140 (451)
                      .+++.++.||.|.- |.||++...+.           .||||++..-..          ..        .....-+..|.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~-----------~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~EC  105 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGR-----------IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCEC  105 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCe-----------EEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHH
Confidence            67999999999999 99999998765           399999322100          00        02334566677


Q ss_pred             HHHHHCC---CCCc--cceeEEEEeC------------------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHH
Q 013016          141 KILKMLD---HPFL--PTLYAEFEAS------------------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA  197 (451)
Q Consensus       141 ~~l~~l~---h~nI--v~l~~~~~~~------------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~  197 (451)
                      +...+|+   +.++  |+.+||..-.                  ....||.||++...           .+..    .-+
T Consensus       106 RAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~----~~~  170 (207)
T PF13095_consen  106 RAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQI----RDI  170 (207)
T ss_pred             HhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccch----hHH
Confidence            7777764   5566  8888888322                  13467777765432           1222    335


Q ss_pred             HHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       198 ~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+|++-|..+|..||+-+|+++.|..     .-+|+|||.+
T Consensus       171 ~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  171 PQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            66888889999999999999999987     4589999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.14  E-value=4.1e-05  Score=68.92  Aligned_cols=130  Identities=21%  Similarity=0.266  Sum_probs=89.1

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-------------HHHHHHHHHHHHHHHHHCC-----
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-------------KKKKVHRAEMEKKILKMLD-----  147 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~~e~~~l~~l~-----  147 (451)
                      ..||.|+.-.||.--+  +..          .+|||.......             .........+|+.....+.     
T Consensus         7 ~~i~~G~~R~cy~HP~--dp~----------~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~   74 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPD--DPN----------LCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGV   74 (199)
T ss_pred             cccccCCCceEEECCC--CCC----------eEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCC
Confidence            3589999999996322  222          799999876500             0112334445665555554     


Q ss_pred             -CCCccceeEEEEeCCeEEEEEeeccCC------chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          148 -HPFLPTLYAEFEASNFSCIVMEFCSGG------DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       148 -h~nIv~l~~~~~~~~~~~lV~E~~~gg------sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                       +.+|.+++|+.+++.-.-+|+|.+.+.      +|.+++..   +.++. .   +...+-+-..||-+++|+.+||+|.
T Consensus        75 ~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~  147 (199)
T PF10707_consen   75 DWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPH  147 (199)
T ss_pred             cccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcc
Confidence             889999999999999899999987442      57777744   33555 2   3333444456888999999999999


Q ss_pred             cEEEccCC----CEEEec
Q 013016          221 NVLVRSDG----HIMLSD  234 (451)
Q Consensus       221 NIll~~~~----~~kl~D  234 (451)
                      ||++....    .+.|+|
T Consensus       148 NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  148 NIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             cEEEEecCCCceEEEEEe
Confidence            99997442    477776

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.07  E-value=1.6e-05  Score=71.13  Aligned_cols=96  Identities=24%  Similarity=0.282  Sum_probs=77.5

Q ss_pred             HHHHHHHHCCC-CCccceeEEEEeCCeEEEEEeeccCCchhhh---hhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---C
Q 013016          138 MEKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSL---RHKQPHKRFSLTSARFYAAEVLVALEYLHM---L  210 (451)
Q Consensus       138 ~e~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~---l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---~  210 (451)
                      .|.-+++.+++ +++++++|+|..    ++|.||...+++...   +...  ...+|..+.+|+.++++.+.+|+.   .
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~~~~~~   81 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELDHGPLG   81 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            37788888876 699999999943    579999977766532   1111  236899999999999999999997   4


Q ss_pred             CCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          211 GIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       211 givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+.-.|++++|+.++.+|++|++|.....
T Consensus        82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             cEEEeecchHHeEEeCCCcEEEEechhcc
Confidence            47789999999999999999999998763

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.05  E-value=7.5e-05  Score=74.40  Aligned_cols=80  Identities=24%  Similarity=0.282  Sum_probs=53.4

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--H--HHHHHHHHHHHHHHHHCC---CCCccceeEE
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--K--KKKVHRAEMEKKILKMLD---HPFLPTLYAE  157 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~--~~~~~~~~~e~~~l~~l~---h~nIv~l~~~  157 (451)
                      .+.||.|.+..||++.+.++.++         ++||.-......  .  .-...+...|.+.|+.+.   -.++++++.+
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~s---------vIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~  101 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKS---------VIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY  101 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeE---------EEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE
Confidence            46799999999999998654322         899985422110  0  112345556777777752   3467888876


Q ss_pred             EEeCCeEEEEEeeccCCc
Q 013016          158 FEASNFSCIVMEFCSGGD  175 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggs  175 (451)
                      .  .+..++|||++++..
T Consensus       102 D--~~~~~lVME~L~~~~  117 (401)
T PRK09550        102 D--EELAVTVMEDLSDHK  117 (401)
T ss_pred             C--CCCCEEEEecCCCcc
Confidence            4  456789999997643

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.04  E-value=2.5e-05  Score=72.74  Aligned_cols=73  Identities=11%  Similarity=0.166  Sum_probs=46.1

Q ss_pred             eeeccCCee-EEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC---CccceeEEEEeC
Q 013016           86 RRIGAGDIG-TVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP---FLPTLYAEFEAS  161 (451)
Q Consensus        86 ~~LG~G~~g-~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---nIv~l~~~~~~~  161 (451)
                      ..|+.|+.. .||+..   . .          +++|+.....     ....+..|.+++..+...   -+.++++.....
T Consensus         3 ~~~~~gG~~n~vy~~~---~-~----------~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~   63 (235)
T cd05155           3 EPVDSGGTDNATFRLG---D-D----------MSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPG   63 (235)
T ss_pred             eeccCCCcccceEEcC---C-c----------eEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCc
Confidence            456766666 599752   1 1          7889876431     223566788888887532   355666544432


Q ss_pred             ---CeEEEEEeeccCCchh
Q 013016          162 ---NFSCIVMEFCSGGDLH  177 (451)
Q Consensus       162 ---~~~~lV~E~~~ggsL~  177 (451)
                         +..++||++++|.++.
T Consensus        64 ~~~~~~~~l~~~i~G~~l~   82 (235)
T cd05155          64 EGYPWPWSVYRWLEGETAT   82 (235)
T ss_pred             cCCCcceEEEEeecCCCCC
Confidence               2458999999997764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=98.00  E-value=0.00011  Score=71.03  Aligned_cols=78  Identities=14%  Similarity=0.080  Sum_probs=55.5

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC---CCccceeEEEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH---PFLPTLYAEFE  159 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~nIv~l~~~~~  159 (451)
                      .-.+.||.|..+.||.....+..           +.+|+.+..     .....+..|...|+.+..   ..++++++++.
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~-----------~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~   80 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGN-----------PMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMT   80 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCC-----------EEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence            33567999999999988654332           777885321     112356668888888853   46889998876


Q ss_pred             eC---CeEEEEEeeccCCch
Q 013016          160 AS---NFSCIVMEFCSGGDL  176 (451)
Q Consensus       160 ~~---~~~~lV~E~~~ggsL  176 (451)
                      .+   +..+||||+++|.++
T Consensus        81 ~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         81 HEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             cCCcCCCeEEEEeccCCEec
Confidence            43   678999999988765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.95  E-value=7e-05  Score=69.58  Aligned_cols=75  Identities=24%  Similarity=0.356  Sum_probs=47.5

Q ss_pred             EeeeccCCeeEEEEEEecc-ccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEEEeCC
Q 013016           85 HRRIGAGDIGTVYLCSLNN-KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEFEASN  162 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~~~~~  162 (451)
                      ++.|..|-...+|++.... ..+         .|++|+.....    ........|..+++.+...+ .+++++.+. + 
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~---------~~vlR~~~~~~----~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~-   67 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQD---------AVLVRVYGNKT----ELIIDRERELRIHKLLSKHGLAPKLYATFQ-N-   67 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCC---------eEEEEEccCCc----cceecHHHHHHHHHHHHhCCCCCeEEEEeC-C-
Confidence            4567888888999987553 111         28899876431    11123345888888885433 455655443 2 


Q ss_pred             eEEEEEeeccCCch
Q 013016          163 FSCIVMEFCSGGDL  176 (451)
Q Consensus       163 ~~~lV~E~~~ggsL  176 (451)
                        .+||||++|.++
T Consensus        68 --~~l~e~i~G~~l   79 (235)
T cd05157          68 --GLIYEFIPGRTL   79 (235)
T ss_pred             --cEEEEeeCCCcC
Confidence              389999998776

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.87  E-value=0.00015  Score=69.94  Aligned_cols=138  Identities=22%  Similarity=0.254  Sum_probs=82.4

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC--ccceeEE-----
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF--LPTLYAE-----  157 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~-----  157 (451)
                      .+.|..|....+|++...+. .          +++|+....      ....+..|+.++..+.+.+  +++++..     
T Consensus        19 i~~i~~G~~n~~y~v~~~~~-~----------~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~   81 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSG-R----------YVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEY   81 (296)
T ss_pred             eecccCccccceEEEEeCCC-c----------EEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcE
Confidence            55677888889998865432 1          899998641      1233445777777774333  4454431     


Q ss_pred             -EEeCCeEEEEEeeccCCchhh----h----------hhhC----CCC-----CCCHHHH--H--------HHHHHHHHH
Q 013016          158 -FEASNFSCIVMEFCSGGDLHS----L----------RHKQ----PHK-----RFSLTSA--R--------FYAAEVLVA  203 (451)
Q Consensus       158 -~~~~~~~~lV~E~~~ggsL~~----~----------l~~~----~~~-----~l~~~~~--~--------~i~~qil~a  203 (451)
                       ...++..++|+++++|..+..    .          ++..    ...     ...+...  .        .....+..+
T Consensus        82 ~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  161 (296)
T cd05153          82 LSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADE  161 (296)
T ss_pred             eeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHH
Confidence             234456789999999877532    0          1110    000     0011110  0        011123334


Q ss_pred             HHHHHH-------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          204 LEYLHM-------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       204 L~~LH~-------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.++..       .++||+|+.|.|||++.++.+.|+||+.+.
T Consensus       162 ~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         162 LARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             HHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            444443       479999999999999987777899999874

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.86  E-value=6.8e-05  Score=70.74  Aligned_cols=133  Identities=18%  Similarity=0.198  Sum_probs=75.3

Q ss_pred             eccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEeCCeEEE
Q 013016           88 IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEASNFSCI  166 (451)
Q Consensus        88 LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~~~~~~l  166 (451)
                      +..|-.+.+|+....+.           .+++|+......   ........|..+++.+...++ ++++..+.    -++
T Consensus         4 ~~~G~tn~~y~~~~~~~-----------~~vlR~~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~   65 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGI-----------SFVWRPQSPVCK---ALGVDRQREYQILQALSALGLAPKPILVNE----HWL   65 (256)
T ss_pred             CCCcCcCCeEEEEeCCc-----------cEEEeeCCcccc---cccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEE
Confidence            45677788888763221           188888653311   110124568888888864433 55555442    268


Q ss_pred             EEeeccCCchhhh-----------------hhhCC--CCCCCHH-HHHHHHHHH---------HHHHHHHHH--------
Q 013016          167 VMEFCSGGDLHSL-----------------RHKQP--HKRFSLT-SARFYAAEV---------LVALEYLHM--------  209 (451)
Q Consensus       167 V~E~~~ggsL~~~-----------------l~~~~--~~~l~~~-~~~~i~~qi---------l~aL~~LH~--------  209 (451)
                      ||||++|..+..-                 ++..+  ..+++.. .+..+..++         ...+..+-.        
T Consensus        66 v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (256)
T TIGR02721        66 LVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLP  145 (256)
T ss_pred             EEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCC
Confidence            9999998765421                 11111  1112221 112222111         111222221        


Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++|+|+.|.||+++.++ +.|+||+.+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            2589999999999999877 7899999874

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.82  E-value=2.6e-05  Score=73.81  Aligned_cols=136  Identities=21%  Similarity=0.292  Sum_probs=95.2

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH-----------------H--HHHHHHHHHH
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK-----------------K--VHRAEMEKKI  142 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~--~~~~~~e~~~  142 (451)
                      +.+.++||-|--+.||.+.+.++..          .++|+=+..+..-..                 .  .-...+|...
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~----------~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfaf  163 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNP----------LILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAF  163 (465)
T ss_pred             hhhccccccccccceEEEecCCCCc----------hhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHH
Confidence            7788999999999999998876543          788865433221000                 0  0113457788


Q ss_pred             HHHCCCCC--ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          143 LKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       143 l~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      |+.|....  +++.++    .+..|+|||++.|-.|.+..+-.        .+..+...+..-+--|-.+|+||+|..-=
T Consensus       164 mkaL~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~--------d~~~ly~~lm~~Iv~la~~GlIHgDFNEF  231 (465)
T KOG2268|consen  164 MKALYERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHVE--------DPPTLYDDLMGLIVRLANHGLIHGDFNEF  231 (465)
T ss_pred             HHHHHHcCCCCCCccc----ccceeeHHHhhcccceeeeeecC--------ChHHHHHHHHHHHHHHHHcCceecccchh
Confidence            88875322  455554    45679999999998887653221        22334455555566778899999999999


Q ss_pred             cEEEccCCCEEEeccCccc
Q 013016          221 NVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~  239 (451)
                      ||++.+++.++++||-...
T Consensus       232 Nimv~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  232 NIMVKDDDKIVVIDFPQMV  250 (465)
T ss_pred             eeEEecCCCEEEeechHhh
Confidence            9999999999999997753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.82  E-value=0.0002  Score=69.55  Aligned_cols=142  Identities=23%  Similarity=0.275  Sum_probs=81.5

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC--ccceeEEE-
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF--LPTLYAEF-  158 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~~-  158 (451)
                      ...++.++.|....||++...+. +          +++|+.....     ....+..|.+++..|...+  +++++... 
T Consensus        24 ~~~i~~~~~G~~n~~y~v~t~~~-~----------~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~   87 (307)
T TIGR00938        24 LLSLKGIAEGVENSNYLLTTDVG-R----------YILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRD   87 (307)
T ss_pred             ceeccccCCccccceEEEEeCCC-c----------EEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCC
Confidence            34456678888889998864322 2          8899875421     1122334666666664222  44444321 


Q ss_pred             -----EeCCeEEEEEeeccCCchhh-----------h---hhhCCCC---------CC-CHHH--HH----------HHH
Q 013016          159 -----EASNFSCIVMEFCSGGDLHS-----------L---RHKQPHK---------RF-SLTS--AR----------FYA  197 (451)
Q Consensus       159 -----~~~~~~~lV~E~~~ggsL~~-----------~---l~~~~~~---------~l-~~~~--~~----------~i~  197 (451)
                           ...+..++|+||++|.++..           .   ++....+         .+ .|..  ..          ...
T Consensus        88 g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~  167 (307)
T TIGR00938        88 GRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMG  167 (307)
T ss_pred             CCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHH
Confidence                 23467899999998865421           1   1110000         00 0100  00          011


Q ss_pred             HHHHHHHHHHHH-------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          198 AEVLVALEYLHM-------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       198 ~qil~aL~~LH~-------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+...++++..       .++||+|+++.||+++.++.+.|+||+.+.
T Consensus       168 ~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       168 AELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             HHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            223345555542       689999999999999988877899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=97.76  E-value=0.00037  Score=68.01  Aligned_cols=30  Identities=33%  Similarity=0.392  Sum_probs=25.9

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .|+||+|++|.|||++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            489999999999999966556899999874

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.69  E-value=0.00035  Score=69.44  Aligned_cols=77  Identities=17%  Similarity=0.223  Sum_probs=51.3

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH----HHHHHHHHHHHHHHHCC---CCCccceeE
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK----KKVHRAEMEKKILKMLD---HPFLPTLYA  156 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~e~~~l~~l~---h~nIv~l~~  156 (451)
                      ..+.||.|....||+....+ + .         ++||.-........    -...+...|...|+.+.   ..++++++.
T Consensus        36 ~~~eiggGn~N~VyrV~~~~-~-s---------vVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~  104 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSS-G-S---------FVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYH  104 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCC-c-c---------EEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEE
Confidence            46789999999999988643 2 2         88998763222111    12344444666666553   357889998


Q ss_pred             EEEeCCeEEEEEeeccC
Q 013016          157 EFEASNFSCIVMEFCSG  173 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~g  173 (451)
                      ++.  +..++|||++++
T Consensus       105 ~de--d~~vlvME~L~~  119 (418)
T PLN02756        105 FDR--TMALIGMRYLEP  119 (418)
T ss_pred             ECC--CCCEEEEeecCC
Confidence            887  456889999976

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.62  E-value=0.00048  Score=67.31  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=49.8

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH----HHHHHHHHHHHHHHHHCC--CC-CccceeEEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----KKKVHRAEMEKKILKMLD--HP-FLPTLYAEFE  159 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~-nIv~l~~~~~  159 (451)
                      .||.|....||++.+..+++.         |+||.-.......    .-...+...|...|+...  .| .++++|.  .
T Consensus         2 EigdGnlN~VfrV~~~~g~~s---------vIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~   70 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRA---------AIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--F   70 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCee---------EEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--E
Confidence            579999999999997543233         8999775443321    223445556777777653  34 4666664  3


Q ss_pred             eCCeEEEEEeeccCC
Q 013016          160 ASNFSCIVMEFCSGG  174 (451)
Q Consensus       160 ~~~~~~lV~E~~~gg  174 (451)
                      +.+...+|||+++..
T Consensus        71 D~e~~~~vMEdL~~~   85 (370)
T TIGR01767        71 DTEMAVTVMEDLSHH   85 (370)
T ss_pred             ccccceehHhhCccc
Confidence            455667999998543

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.59  E-value=0.00036  Score=67.48  Aligned_cols=82  Identities=22%  Similarity=0.230  Sum_probs=48.5

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEEEeCCe
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEFEASNF  163 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~~~~~~  163 (451)
                      ++.|..|-...||++.......   ....+..+++|+.....    ........|..++..+...+ .+++++.+..   
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~---~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~---   72 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDA---LSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN---   72 (302)
T ss_pred             EEEecCcccceeEEEEcCCccc---ccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC---
Confidence            3456677777899887543210   11111238899976431    12234456888888775333 4566666542   


Q ss_pred             EEEEEeeccCCchh
Q 013016          164 SCIVMEFCSGGDLH  177 (451)
Q Consensus       164 ~~lV~E~~~ggsL~  177 (451)
                       .+|+||++|.++.
T Consensus        73 -~~v~e~i~G~~l~   85 (302)
T cd05156          73 -GRIEEFIPSRTLT   85 (302)
T ss_pred             -CchhheeCCCcCC
Confidence             2689999887764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.43  E-value=2.6e-05  Score=86.47  Aligned_cols=233  Identities=13%  Similarity=0.040  Sum_probs=142.3

Q ss_pred             eEEEEEcchHHHHH--HHHHHHHHHHHHHHHHCCCCCccceeEEEE--eCCeEEEEEeeccCCchhhhhhhCCC--CCCC
Q 013016          116 LYAMKVVNKEVLEK--KKKVHRAEMEKKILKMLDHPFLPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPH--KRFS  189 (451)
Q Consensus       116 ~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~--~~~~~~lV~E~~~ggsL~~~l~~~~~--~~l~  189 (451)
                      ++.+||.+.-....  +...+....|...++...|+++...+.-..  ++...+.+++|+.+|.+.+.+-+.-.  ..+.
T Consensus      1254 ~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld 1333 (2724)
T KOG1826|consen 1254 WFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLD 1333 (2724)
T ss_pred             eeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcch
Confidence            36777765432221  111122223444555668888877665443  33467899999999999997765422  2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC-----CCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCccc
Q 013016          190 LTSARFYAAEVLVALEYLHML-----GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY  264 (451)
Q Consensus       190 ~~~~~~i~~qil~aL~~LH~~-----givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (451)
                      ..-+...-.+.+.+..-+|+.     -.+|++||+-|.+|..+.+++++++|+.+..+.                     
T Consensus      1334 ~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp--------------------- 1392 (2724)
T KOG1826|consen 1334 RSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP--------------------- 1392 (2724)
T ss_pred             hchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCc---------------------
Confidence            333333334446666666642     279999999999999999999999999751110                     


Q ss_pred             ccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 013016          265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRT  344 (451)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~  344 (451)
                                                        .....+..++++.|+.|++...-.++.++|+|..|+-+|++-.|..
T Consensus      1393 ----------------------------------~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1393 ----------------------------------VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred             ----------------------------------hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence                                              1111223578888999999888788888999999999999988888


Q ss_pred             CCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          345 PFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       345 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +|...... .++.++...-.....   -+.+.++......+|-+.-..||.    -...+.-+.|.-
T Consensus      1439 ~fi~flq~-~Lkgiidn~tf~sIe---~l~pgdaNve~~~~Ll~K~~~rp~----q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1439 YFIFFLQP-ALKGIIDNHTFFSIE---KLKPGDANVEALHRLLWKYMERPG----QYISLSRDHFAV 1497 (2724)
T ss_pred             HHHHHHHH-HHcCccccccccccc---ccCCCcccHHHHHHHHHHhhhcch----hhhhcccccccc
Confidence            77432111 122222221111111   111113444555566666678888    666666555543

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.42  E-value=0.0006  Score=67.47  Aligned_cols=78  Identities=24%  Similarity=0.376  Sum_probs=51.0

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH---HHHHHHHHHHHHHHHHCC--CC-CccceeEEE
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK---KKKVHRAEMEKKILKMLD--HP-FLPTLYAEF  158 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~--h~-nIv~l~~~~  158 (451)
                      .+.||.|....||++.+....+.         |+||.-.......   .-...+...|.++|+...  .| +++++|.  
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~s---------vIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--  102 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNIS---------VIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--  102 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCce---------EEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--
Confidence            66899999999999997432222         8888765433221   123455566778877663  34 4666774  


Q ss_pred             EeCCeEEEEEeeccC
Q 013016          159 EASNFSCIVMEFCSG  173 (451)
Q Consensus       159 ~~~~~~~lV~E~~~g  173 (451)
                      .+.....+|||+++.
T Consensus       103 ~D~e~~~~vMEdL~~  117 (409)
T PRK12396        103 FDSVMNCCVMEDLSD  117 (409)
T ss_pred             ECcHHhhHHHHhCcc
Confidence            345567799998854

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.31  E-value=0.002  Score=62.40  Aligned_cols=141  Identities=24%  Similarity=0.299  Sum_probs=94.9

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH-----------------------HHHHHHHHHHHHH
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-----------------------EKKKKVHRAEMEK  140 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~~~~~e~  140 (451)
                      |-..|..|--+.||.|....+..          +||||.+-..+                       ......-+.+.|+
T Consensus       148 inGCiSTGKEANVYHat~~dG~~----------~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~  217 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSE----------FAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEM  217 (520)
T ss_pred             cccccccCccceeEeeecCCCce----------EEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHH
Confidence            44557788888999988665543          99999842211                       0111233456678


Q ss_pred             HHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCC
Q 013016          141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKP  219 (451)
Q Consensus       141 ~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~givH~Dlkp  219 (451)
                      .-|.+++...|+-.--...  ....|||+++ |.+=+-.- ..+...++...+..+-.|++.-+.-|. .+++||.||.-
T Consensus       218 RNLkRl~~aGIP~PePIlL--k~hVLVM~Fl-Grdgw~aP-kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSE  293 (520)
T KOG2270|consen  218 RNLKRLNNAGIPCPEPILL--KNHVLVMEFL-GRDGWAAP-KLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSE  293 (520)
T ss_pred             HHHHHHHhcCCCCCCceee--ecceEeeeec-cCCCCcCc-ccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhh
Confidence            8888887666543222222  2357999999 44322110 111234777788888889988888776 67899999999


Q ss_pred             CcEEEccCCCEEEeccCccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~  239 (451)
                      =|+|+. +|.+.++|.+.+.
T Consensus       294 fN~Lyh-dG~lyiIDVSQSV  312 (520)
T KOG2270|consen  294 FNLLYH-DGKLYIIDVSQSV  312 (520)
T ss_pred             hhheEE-CCEEEEEEccccc
Confidence            999886 7899999998874

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.29  E-value=0.0023  Score=61.06  Aligned_cols=29  Identities=24%  Similarity=0.406  Sum_probs=24.8

Q ss_pred             CCeeccCCCCcEEEccCCC-EEEeccCccc
Q 013016          211 GIIYRDLKPENVLVRSDGH-IMLSDFDLSL  239 (451)
Q Consensus       211 givH~Dlkp~NIll~~~~~-~kl~Dfg~a~  239 (451)
                      .++|+|++|.|||++.++. .-|+||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            4899999999999997565 4699999874

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=97.15  E-value=0.0026  Score=62.77  Aligned_cols=145  Identities=14%  Similarity=0.149  Sum_probs=82.6

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEe
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEA  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~  160 (451)
                      ..-+..|..|-...+|++........     ....|++|+.....    ...-....|..+++.+..-++ +++++.+..
T Consensus        38 ~~~i~~l~gGlTN~~y~v~~~~~~~~-----~~~~~v~Ri~g~~t----~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~  108 (344)
T PLN02236         38 ALQVIPLKGAMTNEVFQIKWPTKEGN-----LGRKVLVRIYGEGV----ELFFDRDDEIRTFECMSRHGQGPRLLGRFPN  108 (344)
T ss_pred             cEEEEEcCCcccceeEEEEeCCCCCC-----CCCeEEEEEccCCC----CeeechHHHHHHHHHHHHcCCCCceEEEECC
Confidence            33344566688889999875432110     01138899886532    122223568888888865444 466666643


Q ss_pred             CCeEEEEEeeccCCchhhh-----------------hhhCC--CC--CCCHHHHHHHHHHH-----------------HH
Q 013016          161 SNFSCIVMEFCSGGDLHSL-----------------RHKQP--HK--RFSLTSARFYAAEV-----------------LV  202 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~-----------------l~~~~--~~--~l~~~~~~~i~~qi-----------------l~  202 (451)
                       +   .|++|++|.+|...                 ++...  ..  ...+..+..+..++                 ..
T Consensus       109 -g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~  184 (344)
T PLN02236        109 -G---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLED  184 (344)
T ss_pred             -c---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHH
Confidence             2   58999988776421                 11111  11  11122232332211                 11


Q ss_pred             HHHHHH--------HCCCeeccCCCCcEEEcc-CCCEEEeccCccc
Q 013016          203 ALEYLH--------MLGIIYRDLKPENVLVRS-DGHIMLSDFDLSL  239 (451)
Q Consensus       203 aL~~LH--------~~givH~Dlkp~NIll~~-~~~~kl~Dfg~a~  239 (451)
                      .+..|.        ...++|+|+++.|||++. ++.+.|+||..+.
T Consensus       185 ~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        185 EINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             HHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            122221        235899999999999986 4689999999874

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.15  E-value=0.00064  Score=68.29  Aligned_cols=84  Identities=17%  Similarity=0.165  Sum_probs=58.5

Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC-------CCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS-------PSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       325 ~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +++|||++|.++.++.-|...+......+....+..-........       -....+....+++..|+...|..||.  
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l--  187 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL--  187 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc--
Confidence            499999999999999999988876555554444433211100000       00011225678999999999999999  


Q ss_pred             CChHHHHcCCCcCCC
Q 013016          398 RGAADVKTHPFFKGL  412 (451)
Q Consensus       398 ~~~~ell~hp~~~~~  412 (451)
                        ..++.+|+-|.++
T Consensus       188 --~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  188 --PMELSKRCSFTEV  200 (725)
T ss_pred             --hhHHhcCccHHHH
Confidence              8999999999885

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.13  E-value=0.0025  Score=62.53  Aligned_cols=145  Identities=17%  Similarity=0.233  Sum_probs=81.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~  158 (451)
                      ++..+. .|..|=...+|++...+....      ...|++|+.....    ...-....|..+++.+..-++ +++++++
T Consensus        15 ~~i~i~-~l~gGlTN~~~~v~~~~~~~~------~~~~v~Ri~g~~t----~~~IdR~~E~~il~~l~~~gl~P~~l~~~   83 (330)
T PLN02421         15 SDFSVE-RISGGITNLLLKVSVKEENGN------EVSVTVRLFGPNT----DYVIDRERELQAIKYLSAAGFGAKLLGVF   83 (330)
T ss_pred             CceEEE-EeCCcccceEEEEEecCCCCC------CceEEEEEecCCc----CeEechHHHHHHHHHHHhcCCCCceeEEe
Confidence            344544 454577778998875432110      0128899876431    122334568888888865555 5667666


Q ss_pred             EeCCeEEEEEeeccCCchhh--h---------------hhhCC--CC-CC-CHHHHHHHHHHH-----------------
Q 013016          159 EASNFSCIVMEFCSGGDLHS--L---------------RHKQP--HK-RF-SLTSARFYAAEV-----------------  200 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~--~---------------l~~~~--~~-~l-~~~~~~~i~~qi-----------------  200 (451)
                      . ++   +|.+|++|..|..  +               ++...  .. .. -+..+.++..++                 
T Consensus        84 ~-~G---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~  159 (330)
T PLN02421         84 G-NG---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETI  159 (330)
T ss_pred             C-Cc---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhccc
Confidence            3 33   5899998776532  0               11111  01 01 122333332222                 


Q ss_pred             -----HHHHHHHH----HC----CCeeccCCCCcEEEcc-CCCEEEeccCccc
Q 013016          201 -----LVALEYLH----ML----GIIYRDLKPENVLVRS-DGHIMLSDFDLSL  239 (451)
Q Consensus       201 -----l~aL~~LH----~~----givH~Dlkp~NIll~~-~~~~kl~Dfg~a~  239 (451)
                           ..-+..+.    ..    -++|+|+.+.|||+++ ++.++++||+.|-
T Consensus       160 ~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        160 SFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             CHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence                 11222222    11    2799999999999985 5789999999873

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.12  E-value=0.004  Score=60.11  Aligned_cols=138  Identities=16%  Similarity=0.205  Sum_probs=80.7

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC--CCccceeEEEE
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH--PFLPTLYAEFE  159 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~nIv~l~~~~~  159 (451)
                      ..++..+..|....+|.....+  +         .++|. ... ............+|..+++.+.-  .-+...++.|.
T Consensus        27 ~~~v~~~~~G~sn~t~~~~~~~--~---------~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~   93 (321)
T COG3173          27 LLIVEEISGGWSNDTFRLGDTG--Q---------KYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCG   93 (321)
T ss_pred             CceeeeccCCcccceEEEecCC--c---------eEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccc
Confidence            4445555455555555554431  1         26777 221 11122344555668888887753  33456667776


Q ss_pred             eCC--eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHH-HHHHHHHHHHHH---------------------------
Q 013016          160 ASN--FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA-AEVLVALEYLHM---------------------------  209 (451)
Q Consensus       160 ~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~-~qil~aL~~LH~---------------------------  209 (451)
                      ++.  ..|.||++++|..+.+.+....       ...+++ ..+...|+-||+                           
T Consensus        94 ~~~~g~pf~v~~~veGe~~~~~~~~~~-------~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~  166 (321)
T COG3173          94 EGYLGTPFYVMEWVEGEVVWSALPPES-------LGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEY  166 (321)
T ss_pred             cCCCCCceEEEEEecceeccCcCCccc-------chHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHH
Confidence            655  7799999998854433211110       001111 133333333333                           


Q ss_pred             -----------------------C--------CCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 -----------------------L--------GIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 -----------------------~--------givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                             +        .++|+|+.+.||+++.++-+-+.||+.+.
T Consensus       167 ~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         167 RRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             HHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence                                   2        48999999999999998889999999985

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.87  E-value=0.025  Score=54.81  Aligned_cols=29  Identities=24%  Similarity=0.461  Sum_probs=25.6

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++||+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57899999999999987 678999999763

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.82  E-value=0.0021  Score=58.71  Aligned_cols=29  Identities=34%  Similarity=0.599  Sum_probs=21.0

Q ss_pred             CCeeccCCCCcEEE-ccCCCEEEeccCccc
Q 013016          211 GIIYRDLKPENVLV-RSDGHIMLSDFDLSL  239 (451)
Q Consensus       211 givH~Dlkp~NIll-~~~~~~kl~Dfg~a~  239 (451)
                      .++|+|+.+.|||+ ..++.++|+||..|.
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            58999999999999 788999999999874

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.50  E-value=0.009  Score=57.91  Aligned_cols=72  Identities=19%  Similarity=0.282  Sum_probs=57.5

Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      +..+.|++|++- |++|.-.      +.-.+.++..++.+.+..++-+.. -.+=|||+.-+||||+ +|++.|+||-++
T Consensus       297 e~~y~yl~~kdh-gt~is~i------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfkls  368 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISII------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLS  368 (488)
T ss_pred             CceEEEEEEecC-Cceeeee------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeee
Confidence            334788999986 7777532      124577888898888887777774 4689999999999999 999999999998


Q ss_pred             c
Q 013016          239 L  239 (451)
Q Consensus       239 ~  239 (451)
                      +
T Consensus       369 R  369 (488)
T COG5072         369 R  369 (488)
T ss_pred             e
Confidence            6

>PTZ00384 choline kinase; Provisional

Probab=96.48  E-value=0.0083  Score=59.87  Aligned_cols=86  Identities=16%  Similarity=0.298  Sum_probs=48.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~  158 (451)
                      ++..+. .|..|-...+|++........   .-....|.+++..    ......-....|..+++.+...++ .++++.+
T Consensus        51 ~~i~i~-~l~gGLTN~l~~v~~~~~~~~---~~~~k~Vl~R~~g----~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f  122 (383)
T PTZ00384         51 EFIEIK-KMNNGITNQVYQATLVDGDKD---RYPIKSVCIKKSS----TYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRF  122 (383)
T ss_pred             ccEEEE-EeCCcccceEEEEEecCCCCC---ccccceEEEEecc----CCCceEeccHHHHHHHHHHHhCCCCCeEEEec
Confidence            344444 566688899999975433210   0000013333321    111222234558899999875554 5667766


Q ss_pred             EeCCeEEEEEeeccCCchh
Q 013016          159 EASNFSCIVMEFCSGGDLH  177 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~  177 (451)
                      ..    ++|+||++|.+|.
T Consensus       123 ~~----g~l~efIeGr~l~  137 (383)
T PTZ00384        123 GD----FTIQEWVEGNTMG  137 (383)
T ss_pred             CC----EEEEEEeccccCC
Confidence            43    5999999988764

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=96.48  E-value=0.03  Score=53.86  Aligned_cols=82  Identities=15%  Similarity=0.163  Sum_probs=47.1

Q ss_pred             ccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HHHHHHHHHHHHHHHHHC-------C------CCCccc
Q 013016           89 GAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KKKKVHRAEMEKKILKML-------D------HPFLPT  153 (451)
Q Consensus        89 G~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l-------~------h~nIv~  153 (451)
                      |.|-.|.+|++......+. .+.....-+.||........  .......+.+|+.+.+.+       .      ...+++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~-~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~   80 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKG-DGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPK   80 (294)
T ss_pred             CCcceeEEEEEEEEEEEcc-CCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeece
Confidence            7788899998887651110 11112234889998622211  112344566677666544       1      123566


Q ss_pred             eeEEEEeCCeEEEEEeec
Q 013016          154 LYAEFEASNFSCIVMEFC  171 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~  171 (451)
                      ++....+.+..+||||-+
T Consensus        81 ~~~~~~~~~~~~lvlEDL   98 (294)
T PF02958_consen   81 CYYADEDPGDEVLVLEDL   98 (294)
T ss_pred             EEEeccCCCceeeehhhh
Confidence            666665556789999966

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.46  E-value=0.052  Score=52.67  Aligned_cols=29  Identities=10%  Similarity=0.093  Sum_probs=27.2

Q ss_pred             CCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          211 GIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       211 givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ++||+|+.++|||++.++.+-++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            79999999999999999999999999874

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.43  E-value=0.021  Score=55.74  Aligned_cols=136  Identities=24%  Similarity=0.333  Sum_probs=80.6

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc------cceeE----
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL------PTLYA----  156 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI------v~l~~----  156 (451)
                      .|++ .-..||++...++.           +++|+.+.. .    ....+..|...+..|.-.+|      ..+-|    
T Consensus        33 ~l~s-~eN~~f~~~~~~g~-----------~iLki~~~~-~----~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~   95 (331)
T COG2334          33 GLNS-EENSNFRVQTEDGR-----------YILKIYRPG-W----TRAEIPFELALLQHLAERGIPVPAPLPSLDGELLE   95 (331)
T ss_pred             cccc-ccCceEEEEecCCC-----------eEEEEecCC-C----CHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhh
Confidence            3444 45678888766554           799999865 1    12334447777777632222      22211    


Q ss_pred             EEEeCCeEEEEEeeccCCchhh-h-----------h---h----hCC--C----CCCCHH----H---------HHHHHH
Q 013016          157 EFEASNFSCIVMEFCSGGDLHS-L-----------R---H----KQP--H----KRFSLT----S---------ARFYAA  198 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~-~-----------l---~----~~~--~----~~l~~~----~---------~~~i~~  198 (451)
                      ......+.+-|++|++|..+.. .           +   +    ..+  .    ....|.    .         ......
T Consensus        96 ~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a  175 (331)
T COG2334          96 ALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRA  175 (331)
T ss_pred             hccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHH
Confidence            1122248899999999988872 1           0   0    011  0    011222    0         011334


Q ss_pred             HHHHHHHHHHH--------CC--CeeccCCCCcEEEccCCC-EEEeccCccc
Q 013016          199 EVLVALEYLHM--------LG--IIYRDLKPENVLVRSDGH-IMLSDFDLSL  239 (451)
Q Consensus       199 qil~aL~~LH~--------~g--ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~  239 (451)
                      ++...++.+.+        .+  +||+|+.|+||+++.+.. +.++||+.+.
T Consensus       176 ~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         176 ALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             HHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            45555555554        23  999999999999998875 8999999874

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.34  E-value=0.0089  Score=58.77  Aligned_cols=158  Identities=23%  Similarity=0.260  Sum_probs=92.9

Q ss_pred             hhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccC------CCCCCcceEEEEEcchHHHHHHHHHH
Q 013016           61 FAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQD------RGHEPCCLYAMKVVNKEVLEKKKKVH  134 (451)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~------~~~~~~~~vavK~~~~~~~~~~~~~~  134 (451)
                      ++.+.+..+....+....+.+|.- .-||.|+-+.||+|..+...-+.      .+......+|+|+........     
T Consensus       171 ~T~k~l~qa~~~~~~~eiF~efn~-~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~-----  244 (565)
T KOG1236|consen  171 FTKKKLRQAFGVKKIEEIFSEFNR-EPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQ-----  244 (565)
T ss_pred             HHHHHHHHHHCcCcHHHHHHhcCC-cccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHH-----
Confidence            455556666655455555555543 35899999999999865332211      123334569999987653211     


Q ss_pred             HHHHHHHHHH------------------------------HCC----CCCccceeEEE-------------EeCCeEEEE
Q 013016          135 RAEMEKKILK------------------------------MLD----HPFLPTLYAEF-------------EASNFSCIV  167 (451)
Q Consensus       135 ~~~~e~~~l~------------------------------~l~----h~nIv~l~~~~-------------~~~~~~~lV  167 (451)
                       +.....||.                              +++    --|+.++..-|             .-.....||
T Consensus       245 -ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~  323 (565)
T KOG1236|consen  245 -IRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLV  323 (565)
T ss_pred             -HHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceee
Confidence             111111111                              110    00111111101             111245678


Q ss_pred             EeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEccCC
Q 013016          168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       168 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~  228 (451)
                      -+|..|.++..++...   ..++...++++.-.+.||--|- -.+++|.|++|.||++..+.
T Consensus       324 E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  324 ETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             eeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            8889899998888763   3566677778777777776555 46899999999999997543

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.16  E-value=0.057  Score=51.68  Aligned_cols=75  Identities=24%  Similarity=0.221  Sum_probs=45.6

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeEEEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYAEFE  159 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~~~~  159 (451)
                      +-.+.++-|....+|+....  .+         .+.||+-...      ....+..|.+-|+.|   .--.+++++++..
T Consensus        20 ~~~~~v~GG~i~~a~~~~~~--~~---------~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~   82 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLDTD--GG---------SYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGE   82 (288)
T ss_dssp             -EEEEE--SSSSEEEEEETT--S----------EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE
T ss_pred             eeeEecCCCChhheEEEECC--Cc---------cEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence            34557889999999988732  22         2899987622      223455577777777   3456889999998


Q ss_pred             eCCeEEEEEeeccCC
Q 013016          160 ASNFSCIVMEFCSGG  174 (451)
Q Consensus       160 ~~~~~~lV~E~~~gg  174 (451)
                      ..+..||||||++.+
T Consensus        83 ~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   83 YDDDAFLLLEFLEMG   97 (288)
T ss_dssp             -SSCCEEEEE-----
T ss_pred             ecCCceEEEEeecCC
Confidence            888889999999776

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK06148 hypothetical protein; Provisional

Probab=95.88  E-value=0.092  Score=59.26  Aligned_cols=30  Identities=33%  Similarity=0.444  Sum_probs=25.9

Q ss_pred             CCCeeccCCCCcEEEccCC--CEE-EeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDG--HIM-LSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~--~~k-l~Dfg~a~  239 (451)
                      .++||+|+.+.|||++.++  ++. |+|||.+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            5799999999999999875  555 99999874

>PTZ00296 choline kinase; Provisional

Probab=95.87  E-value=0.09  Score=53.55  Aligned_cols=90  Identities=18%  Similarity=0.189  Sum_probs=51.1

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~  156 (451)
                      ..++. -++.|..|-.-.+|++........ .....+..|.+++.....    ...-....|..+++.+...+| .++++
T Consensus       104 ~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~-~~~~~~~~~lvRiyG~~t----e~lIdR~~E~~v~~~ls~~gi~P~l~~  177 (442)
T PTZ00296        104 TEDDV-RVNQILSGLTNQLFEVSLKEETAN-NYPSIRRRVLFRIYGKDV----DELYNPISEFEVYKTMSKYRIAPQLLN  177 (442)
T ss_pred             CcccE-EEEEecCcccCceEEEEecCCCCc-cccCcCceEEEEecCCCc----cceeCHHHHHHHHHHHHHCCCCCceEE
Confidence            33455 556677787888999876532100 000001238889886432    122233457777777765554 35666


Q ss_pred             EEEeCCeEEEEEeeccCCchh
Q 013016          157 EFEASNFSCIVMEFCSGGDLH  177 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~  177 (451)
                      .+. +   ..|.||++|.+|.
T Consensus       178 ~f~-g---g~I~efi~g~~l~  194 (442)
T PTZ00296        178 TFS-G---GRIEEWLYGDPLR  194 (442)
T ss_pred             EeC-C---CEEEEeeCCccCC
Confidence            553 2   3579999887553

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.54  E-value=0.23  Score=48.62  Aligned_cols=28  Identities=32%  Similarity=0.324  Sum_probs=24.2

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++||+|+.+.|||++ + .+.|+||+.+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            4689999999999995 4 57899999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	451
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-39
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-37
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-36
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-36
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-36
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-36
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-36
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		6e-33
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		9e-33
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-32
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-32
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-32
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-32
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-32
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-32
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-32
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-32
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-32
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-32
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-32
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-32
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-32
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-32
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-32
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-32
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-32
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		5e-32
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-32
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		6e-32
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-32
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-32
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		8e-32
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-32
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-32
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-31
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-31
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-31
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-31
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-29
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		5e-28
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		5e-28
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-28
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-28
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-26
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-26
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-22
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-17
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-22
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-16
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-22
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-16
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-22
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-16
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		8e-22
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-17
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-21
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-16
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-20
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-16
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-20
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-19
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-20
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		8e-16
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-20
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-16
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-20
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-15
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-20
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-16
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-20
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-16
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-20
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-16
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-20
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-15
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-20
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-16
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-20
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-16
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-20
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-19
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-20
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-16
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-20
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-15
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-20
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		8e-16
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-20
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-19
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-20
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-19
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-20
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-16
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		5e-20
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-19
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-20
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-19
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-20
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-19
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		7e-20
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-16
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-20
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-16
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-19
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-16
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-19
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-16
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-19
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-16
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-19
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-16
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-19
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-16
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-19
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-19
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-19
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-19
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-19
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-16
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-19
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-16
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-19
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-16
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-19
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-16
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-19
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		7e-16
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-19
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-16
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-19
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-16
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-19
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-16
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-19
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-16
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-19
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-16
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		8e-19
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		8e-19
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-16
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-19
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-16
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		9e-19
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-16
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-18
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-16
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-18
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-16
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-18
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-17
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-18
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-16
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-18
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-16
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-18
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-16
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-18
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-16
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-18
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-16
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-18
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-16
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-18
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-16
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-18
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-16
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-18
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-16
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-18
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-16
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-18
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-18
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-18
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-16
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-18
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-18
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-18
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-16
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-18
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-16
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-18
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-16
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-18
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		6e-18
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-16
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		8e-18
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-16
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-17
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		5e-17
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-09
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		5e-17
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-17
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		7e-17
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		8e-17
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-16
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-16
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-16
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-16
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-15
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-15
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-15
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-15
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-15
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-15
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-15
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-15
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-15
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-15
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		7e-15
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		9e-15
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-14
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-14
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-14
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-14
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-14
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-14
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-14
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-14
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-14
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-14
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		8e-14
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-13
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-13
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-13
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-13
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-13
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-13
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-13
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-13
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-13
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-13
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-13
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-13
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-13
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-13
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-13
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-13
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		6e-13
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-13
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-13
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-13
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-13
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-13
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-13
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-13
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-13
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-13
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		9e-13
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-13
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-12
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-12
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-12
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-12
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-12
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-12
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-12
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-12
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-12
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-12
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-12
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-12
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-12
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-12
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-11
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-12
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-12
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-12
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-12
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-12
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-12
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-12
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		4e-12
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-12
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-12
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-12
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-12
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-12
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		5e-12
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-12
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		5e-12
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-12
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-12
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-12
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-12
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		8e-12
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		8e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		9e-12
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-11
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-11
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-11
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-11
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-11
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		7e-11
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-11
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-11
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		7e-11
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		8e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		8e-11
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-10
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-10
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-10
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-05
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-10
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-10
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-10
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-10
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-10
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-10
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-10
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		8e-10
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-10
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		9e-10
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		9e-10
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-09
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-09
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-09
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-09
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-09
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-09
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-09
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-09
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-09
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-09
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-09
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-09
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-09
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-09
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-09
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-09
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-09
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-09
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-09
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-09
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-09
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-09
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-09
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-09
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-09
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-09
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-09
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-09
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-09
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-09
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-09
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-09
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-09
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-09
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-09
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-09
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		8e-09
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-09
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		9e-09
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-08
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-08
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		2e-08
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-08
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-08
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		4e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		4e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-08
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		4e-08
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		5e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		8e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		5e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		6e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		6e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		6e-08
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		6e-08
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		6e-08
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		6e-08
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-08
3soa_A	444	Full-Length Human Camkii Length = 444		7e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		8e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		8e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		8e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		9e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		8e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		8e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-07
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-07
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-07
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-07
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-07
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-07
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-07
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-07
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-07
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-07
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-07
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		6e-07
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-07
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		3e-07
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-07
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		1e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		5e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		6e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		6e-07
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-07
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-07
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-07
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-06
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-06
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-06
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-06
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-06
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-06
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		3e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		3e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		3e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		3e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		3e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		3e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-06
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-06
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		4e-06
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-06
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		5e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-06
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-06
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		6e-06
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		6e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		6e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		6e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		7e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		7e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		8e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		8e-06
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		8e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		8e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		8e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		8e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		9e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		9e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		9e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		9e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-05
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-05
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-05
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-05
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-05
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-05
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-05
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-05
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		3e-05
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		3e-05
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		3e-05
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		3e-05
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		3e-05
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		3e-05
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		3e-05
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		3e-05
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		3e-05
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		3e-05
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		3e-05
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		3e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		4e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		4e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		5e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		5e-05
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		5e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-05
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		5e-05
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		5e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		6e-05
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		7e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		7e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		7e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-05
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		7e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		7e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		7e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		7e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		8e-05
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		8e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		8e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		8e-05
3gni_B	389	Structure Of Strad And Mo25 Length = 389		8e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		8e-05
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		8e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		8e-05
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		8e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		8e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		8e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		9e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		9e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		9e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		9e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		1e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-04
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		1e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-04
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		1e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
2v62_A	345	Structure Of Vaccinia-Related Kinase 2 Length = 345		2e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		2e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-04
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		3e-04
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		3e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		3e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-04
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		4e-04
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-04
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		4e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		4e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-04
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		5e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-04
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-04
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		5e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-04
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		6e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-04
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		6e-04
3hec_A	348	P38 In Complex With Imatinib Length = 348		6e-04
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		6e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		6e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		6e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		6e-04
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		6e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		6e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		6e-04
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-04
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		6e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-04
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-04
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		6e-04
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		6e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		6e-04
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-04
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		6e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-04
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		6e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		6e-04
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		6e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		6e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		6e-04
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		6e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		6e-04
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		6e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-04
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		7e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		7e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		7e-04
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-04
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		7e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		7e-04
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-04
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		7e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		7e-04
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		7e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		7e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		7e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		7e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		7e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		8e-04
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		8e-04
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		8e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		9e-04
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		9e-04

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 69/355 (19%)
Query: 66  IRSATF-GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXX-XX 123
           +R+A   G    +   +F+L + +G G  G V+L       R+  GH+   LYAM     
Sbjct: 39  LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLV------RKISGHDTGKLYAMKVLKK 92
Query: 124 XXXXXXXXXXHRAEMEKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHK 182
                          E+++L+ +   PFL TL+  F+      +++++ +GG+L +  H 
Sbjct: 93  ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT--HL 150
Query: 183 QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
              +RF+    + Y  E+++ALE+LH LGIIYRD+K EN+L+ S+GH++L+DF LS    
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS---- 206
Query: 243 AIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
                                                            + FVA+    R
Sbjct: 207 -------------------------------------------------KEFVADE-TER 216
Query: 303 SCSFVGTHEYVSPEVASGG--SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           +  F GT EY++P++  GG   H  AVDWW+ G+ +YE++ G +PF     + +   I +
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNF 414
           + L      P  MS   A+DLI  LL KDP  RLG   R A ++K H FF+ +N+
Sbjct: 277 RILKSEPPYPQEMSAL-AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score =  152 bits (384), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 167/364 (45%), Gaps = 77/364 (21%)
Query: 75  TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
           + L  +DFDL R IG G    V L  L    R         +YAM               
Sbjct: 15  SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDEDID 65
Query: 135 RAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             + EK + +   +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++     A
Sbjct: 66  WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHA 123
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFY+AE+ +AL YLH  GIIYRDLK +NVL+ S+GHI L+D+   +C   +         
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL--------- 172
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                            R     + F G       TPN                    Y+
Sbjct: 173 -----------------RPGDTTSXFCG-------TPN--------------------YI 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQ 368
           +PE+  G  +G +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L    +
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPE 424
            P SMS   A  ++   LNKDP  RLG   + G AD++ HPFF+ +++ ++  + + PP 
Sbjct: 249 IPRSMS-VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPF 307
Query: 425 IPGM 428
            P +
Sbjct: 308 KPNI 311

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 167/364 (45%), Gaps = 77/364 (21%)
Query: 75  TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
           + L  +DFDL R IG G    V L  L    R         +YAM               
Sbjct: 47  SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMRVVKKELVNDDEDID 97
Query: 135 RAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             + EK + +   +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++     A
Sbjct: 98  WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHA 155
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFY+AE+ +AL YLH  GIIYRDLK +NVL+ S+GHI L+D+   +C   +         
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL--------- 204
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                            R     + F G       TPN                    Y+
Sbjct: 205 -----------------RPGDTTSTFCG-------TPN--------------------YI 220
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQ 368
           +PE+  G  +G +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L    +
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPE 424
            P S+S   A  ++   LNKDP  RLG   + G AD++ HPFF+ +++ ++  + + PP 
Sbjct: 281 IPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPF 339
Query: 425 IPGM 428
            P +
Sbjct: 340 KPNI 343

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 166/362 (45%), Gaps = 77/362 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           L  +DFDL R IG G    V L  L    R         +YAM                 
Sbjct: 2   LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDEDIDWV 52
Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           + EK + +   +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++     ARF
Sbjct: 53  QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 110
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           Y+AE+ +AL YLH  GIIYRDLK +NVL+ S+GHI L+D+   +C   +           
Sbjct: 111 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL----------- 157
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                          R     + F G       TPN                    Y++P
Sbjct: 158 ---------------RPGDTTSXFCG-------TPN--------------------YIAP 175
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQSP 370
           E+  G  +G +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L    + P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 235
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            S+S   A  ++   LNKDP  RLG   + G AD++ HPFF+ +++ ++  + + PP  P
Sbjct: 236 RSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
Query: 427 GM 428
            +
Sbjct: 295 NI 296

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 167/367 (45%), Gaps = 77/367 (20%)
Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
           G    L  +DFDL R IG G    V L  L    R         +YAM            
Sbjct: 1   GAMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDE 51
Query: 132 XXHRAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
                + EK + +   +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++   
Sbjct: 52  DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE 109
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
             ARFY+AE+ +AL YLH  GIIYRDLK +NVL+ S+GHI L+D+   +C   +      
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL------ 161
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                               R     + F G       TPN                   
Sbjct: 162 --------------------RPGDTTSXFCG-------TPN------------------- 175
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTF 365
            Y++PE+  G  +G +VDWWA G+ ++EM+ GR+PF     +   ++ T   + +  L  
Sbjct: 176 -YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLT 421
             + P S+S   A  ++   LNKDP  RLG   + G AD++ HPFF+ +++ ++  + + 
Sbjct: 235 QIRIPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293
Query: 422 PPEIPGM 428
           PP  P +
Sbjct: 294 PPFKPNI 300

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 153/351 (43%), Gaps = 74/351 (21%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF   + IG G  G V L          R       YA+                   E+
Sbjct: 39  DFHFLKVIGKGSFGKVLLA---------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 141 KIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            +L K + HPFL  L+  F+ ++    V+++ +GG+L    H Q  + F    ARFYAAE
Sbjct: 90  NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE 147
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  AL YLH L I+YRDLKPEN+L+ S GHI+L+DF   LC   I               
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDF--GLCKENI--------------- 190
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  ++++  S F                                GT EY++PEV  
Sbjct: 191 -------EHNSTTSTF-------------------------------CGTPEYLAPEVLH 212
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
              +   VDWW  G  +YEM+YG  PF + +      NI+ KPL       +S     AR
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNS-----AR 267
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEIPGM 428
            L+ GLL KD   RLG+K    ++K+H FF  +N+   + + +TPP  P +
Sbjct: 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 77/359 (21%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           +  L   DF+LH+ +G G  G V+L       +          +A+              
Sbjct: 12  QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 62
Query: 134 HRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
               +EK++L +  +HPFL  ++  F+       VME+ +GGDL  + H Q   +F L+ 
Sbjct: 63  ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSR 120
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
           A FYAAE+++ L++LH  GI+YRDLK +N+L+  DGHI ++DF   +C   +        
Sbjct: 121 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF--GMCKENMLGDAKT-- 176
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                   N F G       TP+                    Y
Sbjct: 177 ------------------------NEFCG-------TPD--------------------Y 185
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           ++PE+  G  + ++VDWW+FG+ +YEM+ G++PF     E    +I      +P      
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-----R 240
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR 429
             E  A+DL+  L  ++P  RLG +    D++ HP F+ +N+  +  + + PP  P ++
Sbjct: 241 WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEIDPPFRPKVK 296

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  138 bits (347), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 80  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 137
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 172
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+ SFVGT +YVSPE+ +
Sbjct: 173 --------------------FGTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 204
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 259
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  137 bits (346), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 83
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 84  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 141
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+ SFVGT +YVSPE+ +
Sbjct: 177 --------------------FGTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 208
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 263
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 161/354 (45%), Gaps = 75/354 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +   DF+    +G G  G V L          +G E   LYA+                 
Sbjct: 16  VKLTDFNFLMVLGKGSFGKVMLADR-------KGTEE--LYAIKILKKDVVIQDDDVECT 66
Query: 137 EMEKKILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            +EK++L +LD P FL  L++ F+  +    VME+ +GGDL  + H Q   +F    A F
Sbjct: 67  MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVF 124
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           YAAE+ + L +LH  GIIYRDLK +NV++ S+GHI ++DF   +C   +           
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADF--GMCKEHMM---------- 172
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                    TR++                    TP+                    Y++P
Sbjct: 173 -----DGVTTREFCG------------------TPD--------------------YIAP 189
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           E+ +   +G +VDWWA+G+ +YEM+ G+ PF     +   ++I++  +++    P S+S+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY----PKSLSK 245
Query: 376 YHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
             A  +  GL+ K P  RLG    G  DV+ H FF+ +++  +  R + PP  P
Sbjct: 246 -EAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKP 298

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF   + +G G   TV L       R+         YA+                   E+
Sbjct: 8   DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE+
Sbjct: 59  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 116
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           + ALEYLH  GII+RDLKPEN+L+  D HI ++D                          
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 150
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG+ K+  L+P      E   AR+  FVGT +YVSPE+ + 
Sbjct: 151 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 183
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S   + D WA G  IY+++ G  PF A +     + I+K    FP +         ARD
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 238
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           L+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 239 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 285

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF   + +G G   TV L       R+         YA+                   E+
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 59
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE+
Sbjct: 60  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 117
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           + ALEYLH  GII+RDLKPEN+L+  D HI ++D                          
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 151
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG+ K+  L+P      E   AR+  FVGT +YVSPE+ + 
Sbjct: 152 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 184
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S   + D WA G  IY+++ G  PF A +     + I+K    FP +         ARD
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 239
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           L+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 81  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+ +FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANAFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 64
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 65  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 122
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 157
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 158 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 189
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 244
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 245 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 80  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 137
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 172
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 173 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 204
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 259
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF   + +G G   TV L       R+         YA+                   E+
Sbjct: 11  DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 61
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE+
Sbjct: 62  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 119
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           + ALEYLH  GII+RDLKPEN+L+  D HI ++D                          
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG+ K+  L+P      E   AR+  FVGT +YVSPE+ + 
Sbjct: 154 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 186
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S   + D WA G  IY+++ G  PF A +     + I+K    FP +         ARD
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 241
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           L+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 242 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 288

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 81  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++DF                        
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF------------------------ 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                                G+ K+  L+P      E   AR+ SFVGT +YVSPE+ +
Sbjct: 177 ---------------------GTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 160/354 (45%), Gaps = 75/354 (21%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF++ + IG G  G V +  L N  +         ++AM                   E
Sbjct: 74  EDFEILKVIGRGAFGEVAVVKLKNADK---------VFAMKILNKWEMLKRAETACFREE 124
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + +L   D  ++ TL+  F+  N   +VM++  GGDL +L  K    R     ARFY AE
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAE 183
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +++A++ +H L  ++RD+KP+N+L+  +GHI L+D                         
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD------------------------- 218
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FGS          L + E    +S   VGT +Y+SPE+  
Sbjct: 219 --------------------FGSC---------LKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSS 372
                 G +G   DWW+ G+ +YEM+YG TPF A S   T   I+  K+   FPTQ  + 
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV-TD 308
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           +SE +A+DLI  L+     +RLG + G  D K HPFF G+++  IR+   P IP
Sbjct: 309 VSE-NAKDLIRRLICSRE-HRLG-QNGIEDFKKHPFFSGIDWDNIRNCEAPYIP 359

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 81  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 83
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 84  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 141
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 177 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 208
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 263
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 145/346 (41%), Gaps = 71/346 (20%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF   + +G G   TV L       R+         YA+                   E+
Sbjct: 10  DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE+
Sbjct: 61  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           + ALEYLH  GII+RDLKPEN+L+  D HI ++D                          
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 152
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG+ K+  L+P      E   AR+  FVGT +YVSPE+ + 
Sbjct: 153 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 185
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S   + D WA G  IY+++ G  PF A +     + I+K    FP +         ARD
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 240
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPE 424
           L+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP+
Sbjct: 241 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK 286

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 85
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 86  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 143
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 178
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 179 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 210
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP           AR
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK-----AR 265
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 266 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +       I+K    FP +         AR
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 132/289 (45%), Gaps = 62/289 (21%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E+ ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY A
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTA 137
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           E++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                        
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------ 173
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                FG+ K+  L+P      E   AR+  FVGT +YVSPE+ 
Sbjct: 174 ---------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELL 204
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
           +  S   + D WA G  IY+++ G  PF A +     + I+K    FP +         A
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----A 259
Query: 379 RDLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           RDL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 87
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 88  RDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 145
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 180
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 181 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 212
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +     + I+K    FP +         AR
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 267
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 268 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            DF   + +G G   TV L       R+         YA+                   E
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           + ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T  RFY AE
Sbjct: 83  RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++ ALEYLH  GII+RDLKPEN+L+  D HI ++D                         
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG+ K+  L+P      E   AR+  FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
             S   + D WA G  IY+++ G  PF A +       I+K    FP +         AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
           DL+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
           F DF   R +G G  G V+ C +    +         LYA                 A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
           EKKIL  +   F+ +L   FE     C+VM   +GGD+  H     + +  F    A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
            A+++  LE+LH   IIYRDLKPENVL+  DG++ +SD  L++   A             
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                QT T+ Y+                                      GT  +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
           +  G  +  +VD++A G+ +YEMI  R PF A      N+   + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
           S      +D    LL KDP  RLG + G+ D ++THP F+ +++  + +  LTPP +P  
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
           R
Sbjct: 474 R 474

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
           F DF   R +G G  G V+ C +    +         LYA                 A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
           EKKIL  +   F+ +L   FE     C+VM   +GGD+  H     + +  F    A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
            A+++  LE+LH   IIYRDLKPENVL+  DG++ +SD  L++   A             
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                QT T+ Y+                                      GT  +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
           +  G  +  +VD++A G+ +YEMI  R PF A      N+   + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
           S      +D    LL KDP  RLG + G+ D ++THP F+ +++  + +  LTPP +P  
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
           R
Sbjct: 474 R 474

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
           F DF   R +G G  G V+ C +    +         LYA                 A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
           EKKIL  +   F+ +L   FE     C+VM   +GGD+  H     + +  F    A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
            A+++  LE+LH   IIYRDLKPENVL+  DG++ +SD  L++   A             
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                QT T+ Y+                                      GT  +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
           +  G  +  +VD++A G+ +YEMI  R PF A      N+   + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
           S      +D    LL KDP  RLG + G+ D ++THP F+ +++  + +  LTPP +P  
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
           R
Sbjct: 474 R 474

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score =  134 bits (338), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
           F DF   R +G G  G V+ C +    +         LYA                 A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
           EKKIL  +   F+ +L   FE     C+VM   +GGD+  H     + +  F    A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
            A+++  LE+LH   IIYRDLKPENVL+  DG++ +SD  L++   A             
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                QT T+ Y+                                      GT  +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
           +  G  +  +VD++A G+ +YEMI  R PF A      N+   + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
           S      +D    LL KDP  RLG + G+ D ++THP F+ +++  + +  LTPP +P  
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
           R
Sbjct: 474 R 474

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 72/368 (19%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX-XHRAEMEK 140
           F+L R +G G  G V+      + R+  G     ++AM                  + E+
Sbjct: 19  FELLRVLGKGGYGKVF------QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL+ + HPF+  L   F+      +++E+ SGG+L     ++    F   +A FY AE+
Sbjct: 73  NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEI 130
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
            +AL +LH  GIIYRDLKPEN+++   GH+ L+DF   LC  +I                
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF--GLCKESIHDG------------- 175
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
           + T+T             F G+  I+ + P                         E+   
Sbjct: 176 TVTHT-------------FCGT--IEYMAP-------------------------EILMR 195
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             H  AVDWW+ G  +Y+M+ G  PF   + + T+  I+K  L  P   P    E  ARD
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQE--ARD 250
Query: 381 LISGLLNKDPCNRLGSKRG-AADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFP 437
           L+  LL ++  +RLG+  G A +V+ HPFF+ +N+   L R + PP  P ++ ++ +   
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQF 310
Query: 438 DQKIKSQS 445
           D K   Q+
Sbjct: 311 DSKFTRQT 318

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 162/368 (44%), Gaps = 72/368 (19%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX-XHRAEMEK 140
           F+L R +G G  G V+      + R+  G     ++AM                  + E+
Sbjct: 19  FELLRVLGKGGYGKVF------QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL+ + HPF+  L   F+      +++E+ SGG+L     ++    F   +A FY AE+
Sbjct: 73  NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEI 130
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
            +AL +LH  GIIYRDLKPEN+++   GH+ L+DF   LC  +I                
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF--GLCKESI---------------H 173
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
             T T  +   +                     ++A  +  RS                 
Sbjct: 174 DGTVTHXFCGTIE--------------------YMAPEILMRS----------------- 196
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             H  AVDWW+ G  +Y+M+ G  PF   + + T+  I+K  L  P   P    E  ARD
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQE--ARD 250
Query: 381 LISGLLNKDPCNRLGSKRG-AADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFP 437
           L+  LL ++  +RLG+  G A +V+ HPFF+ +N+   L R + PP  P ++ ++ +   
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQF 310
Query: 438 DQKIKSQS 445
           D K   Q+
Sbjct: 311 DSKFTRQT 318

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score =  131 bits (330), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 158/363 (43%), Gaps = 75/363 (20%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           ++  L   DF++ + IG G  G V +  + N  R         +YAM             
Sbjct: 83  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER---------IYAMKILNKWEMLKRAE 133
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
                 E+ +L   D  ++  L+  F+  N   +VM++  GGDL +L  K   K      
Sbjct: 134 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDM 192
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
           ARFY  E+++A++ +H L  ++RD+KP+NVL+  +GHI L+D                  
Sbjct: 193 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD------------------ 234
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                      FGS          L + +    +S   VGT +Y
Sbjct: 235 ---------------------------FGSC---------LKMNDDGTVQSSVAVGTPDY 258
Query: 313 VSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           +SPE+        G +G   DWW+ G+ +YEM+YG TPF A S   T   I+     F  
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-- 316
Query: 368 QSPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
           Q PS +++    A+DLI  L+      RLG + G  D K H FF+GLN+  IR+L  P I
Sbjct: 317 QFPSHVTDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGLNWENIRNLEAPYI 374
Query: 426 PGM 428
           P +
Sbjct: 375 PDV 377

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score =  131 bits (330), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 158/363 (43%), Gaps = 75/363 (20%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           ++  L   DF++ + IG G  G V +  + N  R         +YAM             
Sbjct: 67  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER---------IYAMKILNKWEMLKRAE 117
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
                 E+ +L   D  ++  L+  F+  N   +VM++  GGDL +L  K   K      
Sbjct: 118 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDM 176
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
           ARFY  E+++A++ +H L  ++RD+KP+NVL+  +GHI L+D                  
Sbjct: 177 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD------------------ 218
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                      FGS          L + +    +S   VGT +Y
Sbjct: 219 ---------------------------FGSC---------LKMNDDGTVQSSVAVGTPDY 242
Query: 313 VSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           +SPE+        G +G   DWW+ G+ +YEM+YG TPF A S   T   I+     F  
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-- 300
Query: 368 QSPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
           Q PS +++    A+DLI  L+      RLG + G  D K H FF+GLN+  IR+L  P I
Sbjct: 301 QFPSHVTDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGLNWENIRNLEAPYI 358
Query: 426 PGM 428
           P +
Sbjct: 359 PDV 361

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 150/359 (41%), Gaps = 85/359 (23%)
Query: 81  DFDLHRRIGAG-----------DIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
           DF++ + IG G             G VY   + NK+   +  E  C              
Sbjct: 62  DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCF------------- 108
Query: 130 XXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
                    E+ +L   D  ++  L+  F+  N+  +VME+  GGDL +L  K   +R  
Sbjct: 109 -------REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIP 160
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
              ARFY AE+++A++ +H LG ++RD+KP+N+L+   GHI L+DF   L          
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL---------- 210
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                     R+    R                  +   TP+ L    P   ++      
Sbjct: 211 --------KLRADGTVRSL----------------VAVGTPDYL---SPEILQAVGGGPG 243
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPT 367
                PE           DWWA G+F YEM YG+TPF A S   T   IV  K+ L+ P 
Sbjct: 244 TGSYGPE----------CDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL 293
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
                  E  ARD I  LL   P  RLG + GA D +THPFF GL++  +R   PP  P
Sbjct: 294 VDEGVPEE--ARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPPFTP 348

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           LT  DF +HR IG G  G VY C      + D G     +YAM                A
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 235
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             E+ +L ++   D PF+  +   F   +    +++  +GGDLH   H   H  FS    
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 293
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFYAAE+++ LE++H   ++YRDLKP N+L+   GH+ +SD  L+ C             
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 340
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     F  KK         ++A  V  +  ++       
Sbjct: 341 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 367
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                      ++ DW++ G  +++++ G +PF     +     I +  LT   + P S 
Sbjct: 368 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 416
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           S    R L+ GLL +D   RLG   RGA +VK  PFF+ L++ ++  +   PP IP
Sbjct: 417 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           LT  DF +HR IG G  G VY C      + D G     +YAM                A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             E+ +L ++   D PF+  +   F   +    +++  +GGDLH   H   H  FS    
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFYAAE+++ LE++H   ++YRDLKP N+L+   GH+ +SD  L+ C             
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     F  KK         ++A  V  +  ++       
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                      ++ DW++ G  +++++ G +PF     +     I +  LT   + P S 
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           S    R L+ GLL +D   RLG   RGA +VK  PFF+ L++ ++  +   PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           LT  DF +HR IG G  G VY C      + D G     +YAM                A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             E+ +L ++   D PF+  +   F   +    +++  +GGDLH   H   H  FS    
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFYAAE+++ LE++H   ++YRDLKP N+L+   GH+ +SD  L+ C             
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     F  KK         ++A  V  +  ++       
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                      ++ DW++ G  +++++ G +PF     +     I +  LT   + P S 
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           S    R L+ GLL +D   RLG   RGA +VK  PFF+ L++ ++  +   PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           LT  DF +HR IG G  G VY C      + D G     +YAM                A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             E+ +L ++   D PF+  +   F   +    +++  +GGDLH   H   H  FS    
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           RFYAAE+++ LE++H   ++YRDLKP N+L+   GH+ +SD  L+ C             
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     F  KK         ++A  V  +  ++       
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                      ++ DW++ G  +++++ G +PF     +     I +  LT   + P S 
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           S    R L+ GLL +D   RLG   RGA +VK  PFF+ L++ ++  +   PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 139/353 (39%), Gaps = 69/353 (19%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T   F  +R +G G  G V  C +    +         +YA                 A
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMA 231
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +      F    A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
           AAE+   LE LH   I+YRDLKPE        +I+L D                      
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPE--------NILLDDH--------------------- 322
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                   G  +I  L    L V  P        VGT  Y++PE
Sbjct: 323 ------------------------GHIRISDLG---LAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V     +  + DWWA G  +YEMI G++PF     +     + +     P +     S  
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP- 414
Query: 377 HARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFKGLNFALIRS--LTPPEIP 426
            AR L S LL KDP  RLG + G+A +VK HP FK LNF  + +  L PP  P
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKP 467

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 139/353 (39%), Gaps = 69/353 (19%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T   F  +R +G G  G V  C +    +         +YA                 A
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMA 231
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +      F    A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
           AAE+   LE LH   I+YRDLKPE        +I+L D                      
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPE--------NILLDDH--------------------- 322
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                   G  +I  L    L V  P        VGT  Y++PE
Sbjct: 323 ------------------------GHIRISDLG---LAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V     +  + DWWA G  +YEMI G++PF     +     + +     P +     S  
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP- 414
Query: 377 HARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFKGLNFALIRS--LTPPEIP 426
            AR L S LL KDP  RLG + G+A +VK HP FK LNF  + +  L PP  P
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKP 467

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+L + +G G  G V+L       R D GH    LYAM               R +ME+ 
Sbjct: 30  FELLKVLGQGSFGKVFLV--RKVTRPDSGH----LYAMKVLKKATLKVRDRV-RTKMERD 82
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL  ++HPF+  L+  F+      ++++F  GGDL +   K+    F+    +FY AE+ 
Sbjct: 83  ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 140
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + L++LH LGIIYRDLKPEN+L+  +GHI L+DF LS
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           ++ SF GT EY++PEV +   H ++ DWW++G+ ++EM+ G  PF     + T+  I+K 
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--R 418
            L  P           A+ L+  L  ++P NRLGS   GA ++K H F+  +++  +  R
Sbjct: 246 KLGMP-----QFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRR 300
Query: 419 SLTPPEIPGM 428
            + PP  P +
Sbjct: 301 EIKPPFKPAV 310

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+L + +G G  G V+L       ++  G +   LYAM               R +ME+ 
Sbjct: 26  FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 78
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL  ++HPF+  L+  F+      ++++F  GGDL +   K+    F+    +FY AE+ 
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +AL++LH LGIIYRDLKPEN+L+  +GHI L+DF LS
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           ++ SF GT EY++PEV +   H  + DWW+FG+ ++EM+ G  PF     + T+  I+K 
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
            L  P   SP + S      L+  L  ++P NRLG+   G  ++K H FF  +++  +  
Sbjct: 242 KLGMPQFLSPEAQS------LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
Query: 418 RSLTPPEIPGMRR 430
           R + PP  P   R
Sbjct: 296 REIHPPFKPATGR 308

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+L + +G G  G V+L       ++  G +   LYAM               R +ME+ 
Sbjct: 26  FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 78
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL  ++HPF+  L+  F+      ++++F  GGDL +   K+    F+    +FY AE+ 
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +AL++LH LGIIYRDLKPEN+L+  +GHI L+DF LS
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           ++ SF GT EY++PEV +   H  + DWW+FG+ ++EM+ G  PF     + T+  I+K 
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
            L  P   SP       A+ L+  L  ++P NRLG+   G  ++K H FF  +++  +  
Sbjct: 242 KLGMPQFLSPE------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
Query: 418 RSLTPPEIP 426
           R + PP  P
Sbjct: 296 REIHPPFKP 304

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+L + +G G  G V+L       ++  G +   LYAM               R +ME+ 
Sbjct: 27  FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 79
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL  ++HPF+  L+  F+      ++++F  GGDL +   K+    F+    +FY AE+ 
Sbjct: 80  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 137
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +AL++LH LGIIYRDLKPEN+L+  +GHI L+DF LS
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           ++ SF GT EY++PEV +   H  + DWW+FG+ ++EM+ G  PF     + T+  I+K 
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
            L  P   SP       A+ L+  L  ++P NRLG+   G  ++K H FF  +++  +  
Sbjct: 243 KLGMPQFLSPE------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 296
Query: 418 RSLTPPEIP 426
           R + PP  P
Sbjct: 297 REIHPPFKP 305

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           + +DF + R +G G  G V+L          R       YAM                  
Sbjct: 4   SLQDFQILRTLGTGSFGRVHLI---------RSRHNGRYYAMKVLKKEIVVRLKQVEHTN 54
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E+ +L ++ HPF+  ++  F+ +    ++M++  GG+L SL  K   +RF    A+FYA
Sbjct: 55  DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYA 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           AEV +ALEYLH   IIYRDLKPEN+L+  +GHI ++DF
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDF 150

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V   +    GT +Y++PEV S   +  ++DWW+FGI IYEM+ G TPF   +   T 
Sbjct: 153 AKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             I+   L FP            +DL+S L+ +D   RLG+ + G  DVK HP+FK + +
Sbjct: 213 EKILNAELRFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
Query: 415 A--LIRSLTPPEIPGMRR 430
              L R++  P  P +++
Sbjct: 268 EKLLSRNIETPYEPPIQQ 285

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           +  L   DF LH+ +G G  G V+L       +          +A+              
Sbjct: 11  QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 61
Query: 134 HRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
               +EK++L +  +HPFL  ++  F+       VME+ +GGDL  + H Q   +F L+ 
Sbjct: 62  ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSR 119
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
           A FYAAE+++ L++LH  GI+YRDLK +N+L+  DGHI ++DF +
Sbjct: 120 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           A++  F GT +Y++PE+  G  + ++VDWW+FG+ +YEM+ G++PF     E    +I  
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--R 418
               +P        E  A+DL+  L  ++P  RLG +    D++ HP F+ +N+  +  +
Sbjct: 233 DNPFYP-----RWLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERK 284
Query: 419 SLTPPEIPGMR 429
            + PP  P ++
Sbjct: 285 EIDPPFRPKVK 295

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           L   +F+  R +G G  G V L          R  E   LYA+                 
Sbjct: 20  LGIDNFEFIRVLGKGSFGKVMLA---------RVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
             EK+IL +  +HPFL  L+  F+  +    VMEF +GGDL  + H Q  +RF    ARF
Sbjct: 71  MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARF 128
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
           YAAE++ AL +LH  GIIYRDLK +NVL+  +GH  L+DF   +C   I
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF--GMCKEGI 175

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
              + +F GT +Y++PE+     +G AVDWWA G+ +YEM+ G  PF A + +     I+
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI 417
              + +PT          A  ++   + K+P  RLGS  + G   +  HPFFK +++A +
Sbjct: 238 NDEVVYPTWLHED-----ATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQL 292
Query: 418 --RSLTPPEIPGMR-RQKTMPFPDQKIKSQ 444
             R + PP  P ++ R+    F    IK +
Sbjct: 293 NHRQIEPPFRPRIKSREDVSNFDPDFIKEE 322

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           +  +T  DFD  + +G G  G V L       R          YAM              
Sbjct: 2   RAKVTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEV 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
                E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   A
Sbjct: 53  AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 110
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
           RFY AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 159

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + 
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSL 420
           FP T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L
Sbjct: 227 FPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 280
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQS 445
            PP  P +  +    + D +  +QS
Sbjct: 281 LPPFKPQVTSEVDTRYFDDEFTAQS 305

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++P +     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+   G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IY+M  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D     G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L       R          YAM                 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
            A   +F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 360 KKPLTFP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI 417
            + + FP T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +
Sbjct: 219 MEEIRFPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
Query: 418 --RSLTPPEIPGMRRQKTMPFPDQKIKSQS 445
             + L PP  P +  +    + D +  +QS
Sbjct: 273 VQKKLLPPFKPQVTSEVDTRYFDDEFTAQS 302

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT E ++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 64  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V   + +  GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 209 AKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L       R          YAM                 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + 
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSL 420
           FP T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L
Sbjct: 224 FPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQS 445
            PP  P +  +    + D +  +QS
Sbjct: 278 LPPFKPQVTSEVDTRYFDDEFTAQS 302

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L       R          YAM                 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
           P T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L 
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
           PP  P +  +    + D +  +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 30  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 80
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 81  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 138
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA 175

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 235 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 289
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 290 IAIYQRKVEAPFIPKFK 306

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L       R          YAM                 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
           P T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L 
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
           PP  P +  +    + D +  +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L       R          YAM                 
Sbjct: 7   VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 57
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 58  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 115
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 161

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
           P T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L 
Sbjct: 230 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 283
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
           PP  P +  +    + D +  +QS
Sbjct: 284 PPFKPQVTSEVDTRYFDDEFTAQS 307

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +T  DFD  + +G G  G V L          R       YAM                 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILV---------REKATGRYYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF   LC   I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
           P T SP       A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L 
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
           PP  P +  +    + D +  +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA 188

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF+   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 64  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF    ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 43  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           FD  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 38  FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 88
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RF    ARFYAA+++
Sbjct: 89  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 146
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 183

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 243 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 297
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 298 IAIYQRKVEAPFIPKFK 314

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
           P T  P       A+ L+SGLL KDP  RL G    A ++  H FF G+ +  +  + L+
Sbjct: 229 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 282
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
           PP  P +  +    + D++  +Q
Sbjct: 283 PPFKPQVTSETDTRYFDEEFTAQ 305

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
           P T  P       A+ L+SGLL KDP  RL G    A ++  H FF G+ +  +  + L+
Sbjct: 230 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 283
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
           PP  P +  +    + D++  +Q
Sbjct: 284 PPFKPQVTSETDTRYFDEEFTAQ 306

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
           P T  P       A+ L+SGLL KDP  RL G    A ++  H FF G+ +  +  + L+
Sbjct: 231 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 284
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
           PP  P +  +    + D++  +Q
Sbjct: 285 PPFKPQVTSETDTRYFDEEFTAQ 307

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + 
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSL 420
           FP T  P       A+ L+SGLL KDP  RL G    A ++  H FF G+ +  +  + L
Sbjct: 368 FPRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKL 421
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQ 444
           +PP  P +  +    + D++  +Q
Sbjct: 422 SPPFKPQVTSETDTRYFDEEFTAQ 445

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + IG G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GGD+ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + IG G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GGD+ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 36  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 87  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 144
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 241 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 296 IAIYQRKVEAPFIPKFK 312

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+  H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 64  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+ +GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + IG G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF L+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA 188

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
           +A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A      
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLN 413
              IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   +
Sbjct: 247 YEKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 414 FALI--RSLTPPEIPGMR 429
           +  I  R +  P IP  +
Sbjct: 302 WIAIYQRKVEAPFIPKFK 319

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +F GT EY++PEV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + 
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSL 420
           FP T  P       A+ L+SGLL KDP  RL G    A ++  H FF G+ +  +  + L
Sbjct: 371 FPRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKL 424
Query: 421 TPPEIPGMRRQKTMPFPDQK 440
           +PP  P +  +    + D++
Sbjct: 425 SPPFKPQVTSETDTRYFDEE 444

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     +AM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF L+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
           +A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A      
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLN 413
              IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   +
Sbjct: 247 YEKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 414 FALI--RSLTPPEIPGMR 429
           +  I  R +  P IP  +
Sbjct: 302 WIAIYQRKVEAPFIPKFK 319

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     +AM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     +AM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+ +  GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 29  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 80  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 137
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 174

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+ +  GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 234 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 288
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 289 IAIYQRKVEAPFIPKFK 305

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 36  FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 87  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 144
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 241 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 296 IAIYQRKVEAPFIPKFK 312

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA 188

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 85  HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILK 144
            R +G G  G V LC       +  G E C +  +               R   E ++LK
Sbjct: 37  QRVLGKGSFGEVILCK-----DKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQLLK 87
Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
            LDHP +  LY  FE   +  +V E  +GG+L         KRFS   A     +VL  +
Sbjct: 88  QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 205 EYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRS 261
            Y+H   I++RDLKPEN+L+ S   D +I + DF LS                       
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS----------------------- 182
Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                            F  SKK++                    +GT  Y++PEV   G
Sbjct: 183 ---------------THFEASKKMK------------------DKIGTAYYIAPEVLH-G 208
Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL 381
           ++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF       +SE  A+DL
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAKDL 267
Query: 382 ISGLLNKDPCNRLGSKRGAAD 402
           I  +L   P  R+ S R A D
Sbjct: 268 IRKMLTYVPSMRI-SARDALD 287

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85  HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
            R +G G  G V LC       +D+  G E C +  +               R   E ++
Sbjct: 31  QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           LK LDHP +  LY  FE   +  +V E  +GG+L         KRFS   A     +VL 
Sbjct: 80  LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 137
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
            + Y+H   I++RDLKPEN+L+ S   D +I + DF LS                     
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                              F  SKK++                    +GT  Y++PEV  
Sbjct: 177 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 201
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            G++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF       +SE  A+
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 259
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
           DLI  +L   P  R+ S R A D
Sbjct: 260 DLIRKMLTYVPSMRI-SARDALD 281

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  R +G G  G V L     K+++   H     YAM                   EK+
Sbjct: 44  FERIRTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           I + ++ PFL  L   F+ ++   +V+E+  GG++ S  H +   RFS   ARFYAA+++
Sbjct: 95  IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 189

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85  HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
            R +G G  G V LC       +D+  G E C +  +               R   E ++
Sbjct: 54  QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 102
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           LK LDHP +  LY  FE   +  +V E  +GG+L         KRFS   A     +VL 
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 160
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
            + Y+H   I++RDLKPEN+L+ S   D +I + DF LS                     
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 199
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                              F  SKK++                    +GT  Y++PEV  
Sbjct: 200 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 224
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            G++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF       +SE  A+
Sbjct: 225 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 282
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
           DLI  +L   P  R+ S R A D
Sbjct: 283 DLIRKMLTYVPSMRI-SARDALD 304

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85  HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
            R +G G  G V LC       +D+  G E C +  +               R   E ++
Sbjct: 55  QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 103
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           LK LDHP +  LY  FE   +  +V E  +GG+L         KRFS   A     +VL 
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 161
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
            + Y+H   I++RDLKPEN+L+ S   D +I + DF LS                     
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 200
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                              F  SKK++                    +GT  Y++PEV  
Sbjct: 201 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 225
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            G++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF       +SE  A+
Sbjct: 226 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 283
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
           DLI  +L   P  R+ S R A D
Sbjct: 284 DLIRKMLTYVPSMRI-SARDALD 305

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+L+   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 136/336 (40%), Gaps = 78/336 (23%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G    DF +   +G G    VY        R +  H    + A+               R
Sbjct: 7   GEKIEDFKVGNLLGKGSFAGVY--------RAESIHTGLEV-AIKMIDKKAMYKAGMVQR 57
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            + E KI   L HP +  LY  FE SN+  +V+E C  G+++    K   K FS   AR 
Sbjct: 58  VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARH 116
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           +  +++  + YLH  GI++RDL   N+L+  + +I ++DF L                  
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL------------------ 158
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTL--TPNRLFVAEPVAARSCSFVGTHEYV 313
                        +T+L          +K  TL  TPN  +++  +A RS          
Sbjct: 159 -------------ATQLK------MPHEKHYTLCGTPN--YISPEIATRS---------- 187
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                   +HG   D W+ G   Y ++ GR PF    +  T++N + K +    + PS +
Sbjct: 188 --------AHGLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSFL 235
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           S   A+DLI  LL ++P +RL      + V  HPF 
Sbjct: 236 S-IEAKDLIHQLLRRNPADRL----SLSSVLDHPFM 266

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 44  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 95  ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F+  + +G G  G V L     K+ +   H     YAM                   EK+
Sbjct: 43  FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL+ ++ PFL  L   F+ ++   +VME+  GG++ S  H +   RF    ARFYAA+++
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  EYLH L +IYRDLKPEN+++   G+I ++DF  +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
           A+ V  R+    GT EY++PE+     +  AVDWWA G+ IYEM  G  PF A       
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
             IV   + FP+   S +     +DL+  LL  D   R G+ K G  D+K H +F   ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
             I  R +  P IP  +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 70/275 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVM--EFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E  ILK LDHP +  L    +  N   + M  E  + G +  +   +P    S   ARFY
Sbjct: 86  EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSEDQARFY 142
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             +++  +EYLH   II+RD+KP N+LV  DGHI ++DF +S                  
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS------------------ 184
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                               N F GS  + + T                 VGT  +++PE
Sbjct: 185 --------------------NEFKGSDALLSNT-----------------VGTPAFMAPE 207
Query: 317 VASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
             S       G A+D WA G+ +Y  ++G+ PF           I  + L FP Q P   
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQ-PDIA 266
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
            +   +DLI+ +L+K+P +R+       ++K HP+
Sbjct: 267 EDL--KDLITRMLDKNPESRI----VVPEIKLHPW 295

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 70  TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
            F     + F  F++ R IG G  G V +   N+  +         +YAM          
Sbjct: 5   VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKK---------MYAMKYMNKQKCVE 55
Query: 130 XXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
                    E +I++ L+HPFL  L+  F+      +V++   GGDL    H Q +  F 
Sbjct: 56  RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFK 113
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             + + +  E+++AL+YL    II+RD+KP+N+L+   GH+ ++DF+++
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 298 PVAARSCSFVGTHEYVSPEVAS---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
           P   +  +  GT  Y++PE+ S   G  +  AVDWW+ G+  YE++ GR P+   S+ T+
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-TS 224
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
            + IV    T     PS+ S+     L+  LL  +P  R       +DV+  P+   +N+
Sbjct: 225 SKEIVHTFETTVVTYPSAWSQ-EMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINW 280
Query: 415 ALI--RSLTPPEIPGMRRQKTMP 435
             +  + L P  IP   R    P
Sbjct: 281 DAVFQKRLIPGFIPNKGRLNCDP 303

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT +Y++PE+ +   +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTP 422
               P SMS+  A  +  GL+ K P  RLG    G  D+K H FF+ +++  +  + + P
Sbjct: 241 ----PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 295
Query: 423 PEIP 426
           P  P
Sbjct: 296 PYKP 299

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT +Y++PE+ +   +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTP 422
               P SMS+  A  +  GL+ K P  RLG    G  D+K H FF+ +++  +  + + P
Sbjct: 562 ----PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 616
Query: 423 PEIP 426
           P  P
Sbjct: 617 PYKP 620

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 112/266 (42%), Gaps = 65/266 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSA 193
           R + E +I+K LDHP +  LY  FE +    +VME C+GG+L     +  HKR F  + A
Sbjct: 52  RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 108
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXX 250
                +VL A+ Y H L + +RDLKPEN L  +   D  + L DF L+            
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------------ 156
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                      RF   K ++T      +V+              
Sbjct: 157 --------------------------ARFKPGKMMRTKVGTPYYVS-------------- 176
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
               P+V   G +G   D W+ G+ +Y ++ G  PF+AP++   +  I +   TFP +  
Sbjct: 177 ----PQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS 396
            ++S   A  LI  LL K P  R+ S
Sbjct: 232 LNVSP-QAESLIRRLLTKSPKQRITS 256

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 112/266 (42%), Gaps = 65/266 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSA 193
           R + E +I+K LDHP +  LY  FE +    +VME C+GG+L     +  HKR F  + A
Sbjct: 69  RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 125
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXX 250
                +VL A+ Y H L + +RDLKPEN L  +   D  + L DF L+            
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------------ 173
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                      RF   K ++T      +V+              
Sbjct: 174 --------------------------ARFKPGKMMRTKVGTPYYVS-------------- 193
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
               P+V   G +G   D W+ G+ +Y ++ G  PF+AP++   +  I +   TFP +  
Sbjct: 194 ----PQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS 396
            ++S   A  LI  LL K P  R+ S
Sbjct: 249 LNVSP-QAESLIRRLLTKSPKQRITS 273

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 68/289 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +LK + H  + TL   +E++    +VM+  SGG+L           ++   A   
Sbjct: 54  ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLV 111
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A++YLH  GI++RDLKPEN+L      +  IM++D                   
Sbjct: 112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD------------------- 152
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++            + + +C   GT  YV
Sbjct: 153 --------------------------FGLSKME---------QNGIMSTAC---GTPGYV 174
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   +       I +    F +     +
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
           SE  A+D I  LL KDP  R   ++      +HP+  G N AL R + P
Sbjct: 235 SE-SAKDFICHLLEKDPNERYTCEKAL----SHPWIDG-NTALHRDIYP 277

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 307 VGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--K 360
           VGT +Y+SPEV       G +G   DWW+ G+F++EM+ G TPF A S   T   I+  K
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG--LNFALIR 418
             L FP  +  S    HA++LI   L  D   RLG + G  ++K HPFFK    N+  IR
Sbjct: 296 NSLCFPEDAEISK---HAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIR 350
Query: 419 SLTPPEIP 426
               P +P
Sbjct: 351 ETAAPVVP 358

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +L+ + H  +  L   +E+ N   +VM+  SGG+L     ++    ++   A   
Sbjct: 68  ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTL 125
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A+ YLH +GI++RDLKPEN+L  S   +  IM+SD                   
Sbjct: 126 IRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD------------------- 166
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++            V + +C   GT  YV
Sbjct: 167 --------------------------FGLSKMEG--------KGDVMSTAC---GTPGYV 189
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S+  A+D I  L+ KDP  R   ++ A     HP+  G
Sbjct: 250 SD-SAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 122/323 (37%), Gaps = 77/323 (23%)
Query: 85  HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
            R +G G  G V LC       +D+  G E C +  +               R   E ++
Sbjct: 31  QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           LK LDHP +  LY  FE   +  +V E  +GG+L         KRFS   A     +VL 
Sbjct: 80  LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 137
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
            + Y H   I++RDLKPEN+L+ S   D +I + DF LS                     
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                              F  SKK +       ++A                  PEV  
Sbjct: 177 -----------------THFEASKKXKDKIGTAYYIA------------------PEVLH 201
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
            G++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF       +SE  A+
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 259
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
           DLI   L   P  R+ S R A D
Sbjct: 260 DLIRKXLTYVPSXRI-SARDALD 281

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 69/278 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYA 197
           E  +LK+LDHP +  LY  FE      +VME   GG+L   + H+    +F+   A    
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVII 142
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
            +VL  + YLH   I++RDLKPEN+L+ S   D  I + DF LS                
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-------------- 188
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                   F   KK++       ++A                  
Sbjct: 189 ------------------------FENQKKMKERLGTAYYIA------------------ 206
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
           PEV     +    D W+ G+ ++ ++ G  PF   +++  LR + K   TF +    ++S
Sbjct: 207 PEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS 265
Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           E  A+DLI  +L  D   R+ +++       HP+ K +
Sbjct: 266 E-GAKDLIKQMLQFDSQRRISAQQAL----EHPWIKEM 298

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +L  + HP +  L   +E+     ++M+  SGG+L     ++    ++   A   
Sbjct: 64  ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A++YLH LGI++RDLKPEN+L  S   D  IM+SD                   
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++   P        V + +C   GT  YV
Sbjct: 163 --------------------------FGLSKMED--PGS------VLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S+  A+D I  L+ KDP  R   ++       HP+  G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +L  + HP +  L   +E+     ++M+  SGG+L     ++    ++   A   
Sbjct: 64  ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A++YLH LGI++RDLKPEN+L  S   D  IM+SD                   
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++   P        V + +C   GT  YV
Sbjct: 163 --------------------------FGLSKMED--PG------SVLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S+  A+D I  L+ KDP  R   ++       HP+  G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +L  + HP +  L   +E+     ++M+  SGG+L     ++    ++   A   
Sbjct: 64  ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A++YLH LGI++RDLKPEN+L  S   D  IM+SD                   
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++   P        V + +C   GT  YV
Sbjct: 163 --------------------------FGLSKMED--PG------SVLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S+  A+D I  L+ KDP  R   ++       HP+  G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E E  +L  + HP +  L   +E+     ++M+  SGG+L     ++    ++   A   
Sbjct: 64  ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +VL A++YLH LGI++RDLKPEN+L  S   D  IM+SD                   
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FG  K++   P        V + +C   GT  YV
Sbjct: 163 --------------------------FGLSKMED--PGS------VLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PEV +   +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S+  A+D I  L+ KDP  R   ++       HP+  G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
            R  + VGT +Y+SPEV       G +G   DWW+ G+F+YEM+ G TPF A S   T  
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
            I+  K  LTFP  +  S     A++LI   L  D   RLG + G  ++K H FFK   +
Sbjct: 289 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 343
Query: 415 AL--IRSLTPPEIPGM 428
           A   +R    P +P +
Sbjct: 344 AWETLRDTVAPVVPDL 359

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
            R  + VGT +Y+SPEV       G +G   DWW+ G+F+YEM+ G TPF A S   T  
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
            I+  K  LTFP  +  S     A++LI   L  D   RLG + G  ++K H FFK   +
Sbjct: 289 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 343
Query: 415 AL--IRSLTPPEIPGM 428
           A   +R    P +P +
Sbjct: 344 AWETLRDTVAPVVPDL 359

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 119/341 (34%), Gaps = 77/341 (22%)
Query: 71  FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXX 130
            G K   T  DFD+ R +G G  G VYL          R  +   + A+           
Sbjct: 3   LGSKRQWTLEDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKA 53
Query: 131 XXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
              H+   E +I   L HP +  LY  F  +    +++E+                    
Sbjct: 54  GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------ 95
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                              LG +YR+L+             LS FD    +  I      
Sbjct: 96  -------------------LGTVYRELQK------------LSRFDEQRTATYITELANA 124
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                     S  ++++   R  +  N   GS     +      V  P ++R  +  GT 
Sbjct: 125 L---------SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRTTLCGTL 174
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
           +Y+ PE+  G  H   VD W+ G+  YE + G  PF A + + T R I +   TFP    
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
                  ARDLIS LL  +   RL      A+V  HP+ K 
Sbjct: 235 EG-----ARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
            R  + VGT +Y+SPEV       G +G   DWW+ G+F+YEM+ G TPF A S   T  
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
            I+  K  LTFP  +  S     A++LI   L  D   RLG + G  ++K H FFK   +
Sbjct: 284 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 338
Query: 415 AL--IRSLTPPEIPGM 428
           A   +R    P +P +
Sbjct: 339 AWETLRDTVAPVVPDL 354

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 132/371 (35%), Gaps = 81/371 (21%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K G  +  +D+   +G+G  G V+ C      R            +              
Sbjct: 45  KQGSVYDYYDILEELGSGAFGVVHRCVEKATGR------------VFVAKFINTPYPLDK 92
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           +  + E  I+  L HP L  L+  FE      +++EF SGG+L      + +K  S    
Sbjct: 93  YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEV 151
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             Y  +    L+++H   I++ D+KPEN++  +     +   D  L +            
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK----------- 200
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                             L P+ +               T E+ 
Sbjct: 201 ----------------------------------LNPDEIVKVT---------TATAEFA 217
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           +PE+      G   D WA G+  Y ++ G +PFA   +  TL+N+ +    F   + SS+
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKT 433
           S   A+D I  LL K+P  RL       D   HP+ KG +  L        IP  R  K 
Sbjct: 278 SP-EAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLTS-----RIPSSRYNKI 327
Query: 434 MPFPDQKIKSQ 444
                QKIK +
Sbjct: 328 R----QKIKEK 334

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 119/341 (34%), Gaps = 77/341 (22%)
Query: 71  FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXX 130
            G K   T  DFD+ R +G G  G VYL          R  +   + A+           
Sbjct: 3   LGSKRQWTLEDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKA 53
Query: 131 XXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
              H+   E +I   L HP +  LY  F  +    +++E+                    
Sbjct: 54  GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------ 95
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                              LG +YR+L+             LS FD    +  I      
Sbjct: 96  -------------------LGTVYRELQK------------LSRFDEQRTATYITELANA 124
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                     S  ++++   R  +  N   GS     +      V  P ++R  +  GT 
Sbjct: 125 L---------SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRDTLCGTL 174
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
           +Y+ PE+  G  H   VD W+ G+  YE + G  PF A + + T R I +   TFP    
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
                  ARDLIS LL  +   RL      A+V  HP+ K 
Sbjct: 235 EG-----ARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 65/258 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +L  + HP +      FE +    IVM++C GGDL    + Q    F       +  
Sbjct: 73  EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++ +AL+++H   I++RD+K +N+ +  DG + L DF ++   N+               
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--------------- 177
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                     +  L+R                            +C  +GT  Y+SPE+ 
Sbjct: 178 ----------TVELAR----------------------------AC--IGTPYYLSPEIC 197
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL--TFPTQSPSSMS-E 375
               + N  D WA G  +YE+   +  F A S    ++N+V K +  +FP   P S+   
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGS----MKNLVLKIISGSFP---PVSLHYS 250
Query: 376 YHARDLISGLLNKDPCNR 393
           Y  R L+S L  ++P +R
Sbjct: 251 YDLRSLVSQLFKRNPRDR 268

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W  G+  YE++ G  PF + S+  T R IVK 
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLT 421
            L FP   P+      A+DLIS LL  +P  RL      A V  HP+ +    A  R + 
Sbjct: 237 DLKFPASVPTG-----AQDLISKLLRHNPSERL----PLAQVSAHPWVR----ANSRRVL 283
Query: 422 PP 423
           PP
Sbjct: 284 PP 285

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 61  VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 117
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 118 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 163
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 164 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 194
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 195 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 244 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 278

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 64/272 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y+ +   +   +VMEF  GG L  +     H R +         
Sbjct: 92  EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCL 148
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL YLH  G+I+RD+K +++L+ SDG I LSDF    C+                 
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDF--GFCAQV--------------- 191
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                  SK++    P R              VGT  +++PEV 
Sbjct: 192 -----------------------SKEV----PKR-----------KXLVGTPYWMAPEVI 213
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
           S   +G  VD W+ GI + EMI G  P+    NE  L+ + +   + P   P     +  
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYF---NEPPLQAMRRIRDSLP---PRVKDLHKV 267
Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             ++ G L+         +  A ++  HPF K
Sbjct: 268 SSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 62  VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 201 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 257
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 258 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 303
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 304 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 334
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 335 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 384 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 418

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 68  VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 124
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 125 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 170
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 171 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 201
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 202 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 251 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 285

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E +ILK L+HP +  +   F+A ++  IV+E   GG+L        +KR    + + 
Sbjct: 187 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 243
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
           Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S              
Sbjct: 244 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 289
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    +  G   + +TL     ++A  V       VGT  
Sbjct: 290 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 320
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
           Y             AVD W+ G+ ++  + G  PF+    + +L++ I      F  +  
Sbjct: 321 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + +SE  A DL+  LL  DP  R  ++        HP+ +
Sbjct: 370 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 404

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 82/321 (25%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM------- 138
           R++G+G  G V LC      ++  GH    +  +                 E        
Sbjct: 42  RKLGSGAYGEVLLC------KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL---RHKQPHKRFSLTSARF 195
           E  +LK LDHP +  L+  FE   +  +V EF  GG+L      RHK     F    A  
Sbjct: 96  EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAAN 150
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLSDFDLSLCSNAIXXXXXXXX 252
              ++L  + YLH   I++RD+KPEN+L+ +     +I + DF L               
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL--------------- 195
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                   S  +++ Y  R                   +RL              GT  Y
Sbjct: 196 --------SSFFSKDYKLR-------------------DRL--------------GTAYY 214
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           ++PEV     +    D W+ G+ +Y ++ G  PF   +++  ++ + K    F      +
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 373 MSEYHARDLISGLLNKDPCNR 393
           +S+  A++LI  +L  D   R
Sbjct: 274 ISD-EAKELIKLMLTYDYNKR 293

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 117/333 (35%), Gaps = 95/333 (28%)
Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
           G+K      DF++ R +G G  G VYL          R  +   + A+            
Sbjct: 1   GKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAG 51
Query: 132 XXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
             H+   E +I   L HP +  LY  F  +    +++E+                     
Sbjct: 52  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------- 92
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
                             LG +YR+L+             LS FD               
Sbjct: 93  ------------------LGTVYRELQK------------LSKFD--------------- 107
Query: 252 XXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVA 300
                   R+ TY  + +  LS     R ++R    + +   +   L +A+        +
Sbjct: 108 ------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS 161
Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           +R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
              TFP           ARDLIS LL  +P  R
Sbjct: 222 VEFTFP-----DFVTEGARDLISRLLKHNPSQR 249

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
            ++
Sbjct: 245 KKF 247

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
            ++
Sbjct: 245 KKF 247

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
            ++
Sbjct: 245 KKF 247

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 125/357 (35%), Gaps = 95/357 (26%)
Query: 48  PENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ 107
           P+ L   P  + +   ++ +     +K      DF++ R +G G  G VYL         
Sbjct: 2   PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA-------- 53
Query: 108 DRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
            R  +   + A+              H+   E +I   L HP +  LY  F  +    ++
Sbjct: 54  -REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
           +E+                                       LG +YR+L+         
Sbjct: 113 LEYAP-------------------------------------LGTVYRELQ--------- 126
Query: 228 GHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGS 282
               LS FD                       R+ TY  + +  LS     R ++R    
Sbjct: 127 ---KLSKFD---------------------EQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 283 KKIQTLTPNRLFVAE------PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
           + +   +   L +A+        ++R  +  GT +Y+ PE+  G  H   VD W+ G+  
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 337 YEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           YE + G+ PF A + + T + I +   TFP           ARDLIS LL  +P  R
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 274

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 63/234 (26%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 64  EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+  D +I ++DF  S                    
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS-------------------- 161
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 162 ------------------NEFTVGNKLDT------------------FCGSPPYAAPELF 185
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPT 367
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 239

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 116/336 (34%), Gaps = 95/336 (28%)
Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
              G K      DF++ R +G G  G VYL          R  +   + A+         
Sbjct: 1   GAMGSKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 51
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                H+   E +I   L HP +  LY  F  +    +++E+                  
Sbjct: 52  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---------------- 95
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
                                LG +YR+L+             LS FD            
Sbjct: 96  ---------------------LGTVYRELQK------------LSKFD------------ 110
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------ 297
                      R+ TY  + +  LS     R ++R    + +   +   L +A+      
Sbjct: 111 ---------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH 161
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
             ++R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + 
Sbjct: 162 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           I +   TFP           ARDLIS LL  +P  R
Sbjct: 222 ISRVEFTFPDFVTEG-----ARDLISRLLKHNPSQR 252

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 122/324 (37%), Gaps = 79/324 (24%)
Query: 78  TFRDFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           T  +F + ++IG G    VY   C L+          P  L  +               R
Sbjct: 30  TLANFRIEKKIGRGQFSEVYRAACLLDGV--------PVALKKVQIFDLMDAKA-----R 76
Query: 136 AEMEKKI--LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTS 192
           A+  K+I  LK L+HP +   YA F   N   IV+E    GDL   ++H +  KR     
Sbjct: 77  ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 193 ARF-YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  ALE++H   +++RD+KP NV + + G + L D  L              
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG------------- 183
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                     RFF SK                   + S VGT  
Sbjct: 184 --------------------------RFFSSK----------------TTAAHSLVGTPY 201
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--PLTFPTQS 369
           Y+SPE      +    D W+ G  +YEM   ++PF    ++  L ++ KK     +P   
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPP-L 258
Query: 370 PSSMSEYHARDLISGLLNKDPCNR 393
           PS       R L++  +N DP  R
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKR 282

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      ++ME+ SGG++    +   H R     AR    
Sbjct: 61  EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFR 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 158
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 159 ------------------NEFTVGGKLDT------------------FCGSPPYAAPELF 182
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 242
Query: 374 SEY 376
             +
Sbjct: 243 KRF 245

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 64/273 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  ++  LDH  L  LY  FE+ N   +VME+  GG+L      + +    L +  F   
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-K 194
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
           ++   + ++H + I++ DLKPEN+L   R    I + DF L+                  
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA------------------ 236
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    R+Y  R    +N                              GT E+++PE
Sbjct: 237 ---------RRYKPREKLKVN-----------------------------FGTPEFLAPE 258
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V +        D W+ G+  Y ++ G +PF   ++  TL NI+        +    +SE 
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISE- 317
Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            A++ IS LL K+   R+     A++   HP+ 
Sbjct: 318 EAKEFISKLLIKEKSWRI----SASEALKHPWL 346

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 61  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 118
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 161
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK+   TPN                    Y++
Sbjct: 162 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 183
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 243
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 244 S------LIQKMLQTDPTAR 257

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 124/357 (34%), Gaps = 95/357 (26%)
Query: 48  PENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ 107
           P+ L   P  + +   ++ +     +K      DF++ R +G G  G VYL         
Sbjct: 2   PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA-------- 53
Query: 108 DRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
            R  +   + A+              H+   E +I   L HP +  LY  F  +    ++
Sbjct: 54  -REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
           +E+                                       LG +YR+L+         
Sbjct: 113 LEYAP-------------------------------------LGTVYRELQ--------- 126
Query: 228 GHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGS 282
               LS FD                       R+ TY  + +  LS     R ++R    
Sbjct: 127 ---KLSKFD---------------------EQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 283 KKIQTLTPNRLFVAE------PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
           + +   +   L +A+        ++R     GT +Y+ PE+  G  H   VD W+ G+  
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 337 YEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           YE + G+ PF A + + T + I +   TFP           ARDLIS LL  +P  R
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 274

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 85  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 142
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 185
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK+   TPN                    Y++
Sbjct: 186 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 207
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 208 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 267
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 268 S------LIQKMLQTDPTAR 281

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 18  KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 68
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 69  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 108
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 109 -----------------LGTVYRELQK------------LSKFD---------------- 123
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 124 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 178
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 179 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 239 EFTFP-----DFVTEGARDLISRLLKHNPSQR 265

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 87  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 144
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 187
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK+   TPN                    Y++
Sbjct: 188 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 209
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 269
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 270 S------LIQKMLQTDPTAR 283

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 117/336 (34%), Gaps = 95/336 (28%)
Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
           A   +K      DF++ R +G G  G VYL          R  +   + A+         
Sbjct: 2   AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                H+   E +I   L HP +  LY  F  +    +++E+                  
Sbjct: 53  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---------------- 96
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
                                LG +YR+L+             LS FD            
Sbjct: 97  ---------------------LGTVYRELQK------------LSKFD------------ 111
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------ 297
                      R+ TY  + +  LS     R ++R    + +   +   L +A+      
Sbjct: 112 ---------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
             ++R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + 
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           I +   TFP           ARDLIS LL  +P  R
Sbjct: 223 ISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 253

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 95  -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 225 EFTFP-----DFVTEGARDLISRLLKHNPSQR 251

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 95  -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 114/317 (35%), Gaps = 98/317 (30%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL------------------ 176
           R + E +++K L HP +  LY  +E   + C+VME C GG L                  
Sbjct: 74  RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 177 ---------------------HSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIY 214
                                H  R      +R  L S      ++  AL YLH  GI +
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN--IMRQIFSALHYLHNQGICH 191
Query: 215 RDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSR 274
           RD+KPEN L  ++    +   D  L                                   
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGL----------------------------------- 216
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV--ASGGSHGNAVDWWAF 332
                  SK+   L     +     A       GT  +V+PEV   +  S+G   D W+ 
Sbjct: 217 -------SKEFYKLNNGEYYGMTTKA-------GTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 333 GIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN 392
           G+ ++ ++ G  PF   ++  T+  ++ K L F   + + +S   ARDL+S LLN++   
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL-ARDLLSNLLNRNVDE 321
Query: 393 RLGSKRGAADVKTHPFF 409
           R  + R       HP+ 
Sbjct: 322 RFDAMRAL----QHPWI 334

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 56
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 96
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 97  -----------------LGTVYRELQ------------KLSKFD---------------- 111
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 112 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE   G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 227 EFTFP-----DFVTEGARDLISRLLKHNPSQR 253

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 56
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 96
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 97  -----------------LGTVYRELQK------------LSKFD---------------- 111
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 112 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R     GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 227 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 253

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 115/331 (34%), Gaps = 95/331 (28%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K      DF++ R +G G  G VYL          R  +   + A+              
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           H+   E +I   L HP +  LY  F  +    +++E+                       
Sbjct: 53  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
                           LG +YR+L+             LS FD                 
Sbjct: 92  ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
                 R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
             +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +  
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            TFP           ARDLIS LL  +P  R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 113/321 (35%), Gaps = 75/321 (23%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           K      DF++ R +G G  G VYL    N+K+          + A+             
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKF----------ILALKVLFKAQLEKAGV 51
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  S    +++E+                      
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP-------------------- 91
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD    +  I        
Sbjct: 92  -----------------LGTVYRELQK------------LSKFDEQRTATYITELANAL- 121
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                   S  ++++   R  +  N   GS     +      V  P ++R  +  GT +Y
Sbjct: 122 --------SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDY 172
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           + PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP      
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEG 232
Query: 373 MSEYHARDLISGLLNKDPCNR 393
                ARDLIS LL  +P  R
Sbjct: 233 -----ARDLISRLLKHNPSQR 248

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 95  -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A         ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 3   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 53
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 93
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 94  -----------------LGTVYRELQK------------LSKFD---------------- 108
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A         ++
Sbjct: 109 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS 163
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 224 EFTFP-----DFVTEGARDLISRLLKHNPSQR 250

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 1   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 51
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 91
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 92  -----------------LGTVYRELQK------------LSKFD---------------- 106
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 107 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R     GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 222 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 248

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 52
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 92
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 93  -----------------LGTVYRELQK------------LSKFD---------------- 107
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 108 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R     GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 223 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 249

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 115/331 (34%), Gaps = 95/331 (28%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K      DF++ R +G G  G VYL          R  +   + A+              
Sbjct: 1   KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 51
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           H+   E +I   L HP +  LY  F  +    +++E+                       
Sbjct: 52  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 90
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
                           LG +YR+L+             LS FD                 
Sbjct: 91  ----------------LGTVYRELQK------------LSKFD----------------- 105
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
                 R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R
Sbjct: 106 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
             +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +  
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            TFP           ARDLIS LL  +P  R
Sbjct: 222 FTFPDFVTEG-----ARDLISRLLKHNPSQR 247

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 3   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 53
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 93
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 94  -----------------LGTVYRELQK------------LSKFD---------------- 108
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 109 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 163
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R     GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 224 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 250

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
              DF++ R +G G  G VYL          R  +   + A+              H+  
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+                           
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 94
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
                       LG +YR+L+             LS FD                     
Sbjct: 95  ------------LGTVYRELQK------------LSKFD--------------------- 109
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
             R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R  + 
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
                      ARDLIS LL  +P  R
Sbjct: 230 DFVTEG-----ARDLISRLLKHNPSQR 251

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 63  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 120
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 163
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK    TPN                    Y++
Sbjct: 164 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 185
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 245
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 246 S------LIQKMLQTDPTAR 259

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 52
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 92
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 93  -----------------LGTVYRELQK------------LSKFD---------------- 107
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 108 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R  +  GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 223 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 249

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           +K      DF++ R +G G  G VYL          R  +   + A+             
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  LY  F  +    +++E+                      
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
                            LG +YR+L+             LS FD                
Sbjct: 95  -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
                  R+ TY  + +  LS     R ++R    + +   +   L +A+        ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
           R     GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I + 
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             TFP           ARDLIS LL  +P  R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 67  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 124
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 167
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK    TPN                    Y++
Sbjct: 168 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 189
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 249
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 250 S------LIQKMLQTDPTAR 263

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +  ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR
Sbjct: 63  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 120
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           +Y  ++++  +YLH   +I+RDLK  N+ +  D  + + DF L                 
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 163
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                         +T++     R    KK    TPN                    Y++
Sbjct: 164 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 185
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   + P   +P + 
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 245
Query: 374 SEYHARDLISGLLNKDPCNR 393
           S      LI  +L  DP  R
Sbjct: 246 S------LIQKMLQTDPTAR 259

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H       AR    
Sbjct: 56  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGWMKEKEARAKFR 113
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+ T                  F G+  Y +PE+ 
Sbjct: 154 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 177
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 237
Query: 374 SEY 376
            ++
Sbjct: 238 KKF 240

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K      DF++ R +G G  G VYL          R  +   + A+              
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           H+   E +I   L HP +  LY  F  +    +++E+                       
Sbjct: 53  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
                           LG +YR+L+             LS FD                 
Sbjct: 92  ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
                 R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
                GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +  
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            TFP           ARDLIS LL  +P  R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K      DF++ R +G G  G VYL          R  +   + A+              
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           H+   E +I   L HP +  LY  F  +    +++E+                       
Sbjct: 53  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
                           LG +YR+L+             LS FD                 
Sbjct: 92  ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
                 R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
                GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +  
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            TFP           ARDLIS LL  +P  R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
              DF++ R +G G  G VYL          R  +   + A+              H+  
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+                           
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 91
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
                       LG +YR+L+             LS FD                     
Sbjct: 92  ------------LGTVYRELQK------------LSKFD--------------------- 106
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
             R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R  + 
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
                      ARDLIS LL  +P  R
Sbjct: 227 -----DFVTEGARDLISRLLKHNPSQR 248

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           K   T  DFD+ R +G G  G VYL     NK+          + A+             
Sbjct: 9   KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 58
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  +Y  F       +++EF   G+L+  +  Q H RF    
Sbjct: 59  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQR 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
           +  +  E+  AL Y H   +I+RD+KPEN+L+   G + ++DF  S+ + ++
Sbjct: 117 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 168

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
           + R     GT +Y+ PE+  G +H   VD W  G+  YE + G  PF +PS+  T R IV
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
              L FP           ++DLIS LL   P  RL  K     V  HP+ K    A  R 
Sbjct: 227 NVDLKFPPFLSDG-----SKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRR 273
Query: 420 LTPP 423
           + PP
Sbjct: 274 VLPP 277

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCL 254
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 255 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 297
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                  SK++                R    VGT  +++PE+ 
Sbjct: 298 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 319
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 370
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 371 HKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFLAKAG--------PPASIVPLMR 418
Query: 430 RQKT 433
           + +T
Sbjct: 419 QNRT 422

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 109/273 (39%), Gaps = 58/273 (21%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E  IL+ +  HP + TL   +E+S+F  +V +    G+L     ++     S    R   
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIM 206
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
             +L A+ +LH   I++RDLKPEN+L+  +  I LSDF  S C                 
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-C----------------- 248
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                    +K++ L     ++A  +    CS   TH       
Sbjct: 249 --------------------HLEPGEKLRELCGTPGYLAPEIL--KCSMDETH------- 279
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                +G  VD WA G+ ++ ++ G  PF        LR I++    F +      S   
Sbjct: 280 ---PGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST- 335
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            +DLIS LL  DP  RL +++       HPFF+
Sbjct: 336 VKDLISRLLQVDPEARLTAEQAL----QHPFFE 364

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           K      DF++ R +G G  G VYL          R  +   + A+              
Sbjct: 2   KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           H+   E +I   L HP +  LY  F  +    +++E+                       
Sbjct: 53  HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
                           LG +YR+L+             LS FD                 
Sbjct: 92  ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
                 R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
                GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +  
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            TFP           ARDLIS LL  +P  R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
              DF++ R +G G  G VYL          R  +   + A+              H+  
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLA---------REKQRKFILALKVLFKAQLEKAGVEHQLR 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+                           
Sbjct: 54  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 88
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
                       LG +YR+L+             LS FD                     
Sbjct: 89  ------------LGTVYRELQK------------LSKFD--------------------- 103
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
             R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R  + 
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 223
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
                      ARDLIS LL  +P  R
Sbjct: 224 DFVTEG-----ARDLISRLLKHNPSQR 245

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 113/327 (34%), Gaps = 95/327 (29%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
              DF++ R +G G  G VYL          R  +   + A+              H+  
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+                           
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 91
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
                       LG +YR+L+             LS FD                     
Sbjct: 92  ------------LGTVYRELQK------------LSKFD--------------------- 106
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
             R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R    
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
                      ARDLIS LL  +P  R
Sbjct: 227 -----DFVTEGARDLISRLLKHNPSQR 248

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 76  EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 132
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 133 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 175
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                  SK++                R    VGT  +++PE+ 
Sbjct: 176 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 197
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 248
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 249 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 296
Query: 430 RQKT 433
           + +T
Sbjct: 297 QNRT 300

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
           K   T  DFD+ R +G G  G VYL     NK+          + A+             
Sbjct: 8   KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 57
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  +Y  F       +++EF   G+L+  +  Q H RF    
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQR 115
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
           +  +  E+  AL Y H   +I+RD+KPEN+L+   G + ++DF  S+ + ++
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
           + R     GT +Y+ PE+  G +H   VD W  G+  YE + G  PF +PS+  T R IV
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
              L FP           ++DLIS LL   P  RL  K     V  HP+ K    A  R 
Sbjct: 226 NVDLKFPPFLSDG-----SKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRR 272
Query: 420 LTPP 423
           + PP
Sbjct: 273 VLPP 276

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCL 177
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 178 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 220
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                  SK++                R    VGT  +++PE+ 
Sbjct: 221 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 242
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 293
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 294 HKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFLA--------KAGPPASIVPLMR 341
Query: 430 RQKT 433
           + +T
Sbjct: 342 QNRT 345

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 78  EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 134
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 135 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 177
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                  SK++                R    VGT  +++PE+ 
Sbjct: 178 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 199
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 250
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 251 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 298
Query: 430 RQKT 433
           + +T
Sbjct: 299 QNRT 302

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 56
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 57  XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 155
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 156 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 181
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAAGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 113/327 (34%), Gaps = 95/327 (29%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
              DF++ R +G G  G VYL          R  +   + A+              H+  
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+                           
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 94
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
                       LG +YR+L+             LS FD                     
Sbjct: 95  ------------LGTVYRELQK------------LSKFD--------------------- 109
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
             R+ TY  + +  LS     R ++R    + +   +   L +A+        ++R    
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
                      ARDLIS LL  +P  R
Sbjct: 230 DFVTEG-----ARDLISRLLKHNPSQR 251

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             D+DL + +G G  G V L    N+  ++         A+                 + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                    
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   +Y+ R  R LN+                             GT  YV+PE+ 
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
                H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             D+DL + +G G  G V L    N+  ++         A+                 + 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 53
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  
Sbjct: 54  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                    
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 152
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   +Y+ R  R LN+                             GT  YV+PE+ 
Sbjct: 153 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 178
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
                H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             D+DL + +G G  G V L    N+  ++         A+                 + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                    
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   +Y+ R  R LN+                             GT  YV+PE+ 
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
                H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             D+DL + +G G  G V L    N+  ++         A+                 + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                    
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   +Y+ R  R LN+                             GT  YV+PE+ 
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
                H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             D+DL + +G G  G V L    N+  ++         A+                 + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                    
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   +Y+ R  R LN+                             GT  YV+PE+ 
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
                H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 54
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 55  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 112
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 154 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 179
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 7   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 56  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D+DL + +G G  G V L    N+  ++         A+                 + E 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 56
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 57  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT--------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                 +Y+ R  R LN+                             GT  YV+PE+   
Sbjct: 154 ----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 181
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
              H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 105/271 (38%), Gaps = 66/271 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I K LD+P +   +  FE  +F  +V+E C    L  L HK+  K  +   AR++  
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           + +  ++YLH   +I+RDLK  N+ +  D  + + DF L                     
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                     +T++       F  ++ +TL                   GT  Y++PEV 
Sbjct: 189 ----------ATKIE------FDGERKKTL------------------CGTPNYIAPEVL 214
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
               H   VD W+ G  +Y ++ G+ PF     + T   I K   + P       S    
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA--- 271
Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
             LI  +L+ DP  R       A++ T  FF
Sbjct: 272 --LIRRMLHADPTLR----PSVAELLTDEFF 296

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
           A   +K      DF++ R +G G  G VYL          R  +   + A+         
Sbjct: 2   AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                H+   E +I   L HP +  LY  F  +    +++E+   G+++  +  Q   +F
Sbjct: 53  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKF 110
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
                  Y  E+  AL Y H   +I+RD+KPEN+L+ S G + ++DF  S+
Sbjct: 111 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
           A   +K      DF++ R +G G  G VYL          R  +   + A+         
Sbjct: 2   AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                H+   E +I   L HP +  LY  F  +    +++E+   G+++  +  Q   +F
Sbjct: 53  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKF 110
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
                  Y  E+  AL Y H   +I+RD+KPEN+L+ S G + ++DF  S+
Sbjct: 111 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 6   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------ 154
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 155 -------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 55
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 153
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 154 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 180
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 122/352 (34%), Gaps = 87/352 (24%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           +D+H  +G G  G V+  +      +  G+     + M                   E +
Sbjct: 53  YDIHEELGTGAFGVVHRVT-----ERATGNNFAAKFVMTPHESDKET-------VRKEIQ 100
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
            + +L HP L  L+  FE  N   ++ EF SGG+L   +    H + S   A  Y  +V 
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVC 159
Query: 202 VALEYLHMLGIIYRDLKPENVL--VRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
             L ++H    ++ DLKPEN++   +    + L DF L+   +                 
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---------------- 203
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                                  + ++  T    F A  VA                   
Sbjct: 204 ----------------------KQSVKVTTGTAEFAAPEVA------------------E 223
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
           G   G   D W+ G+  Y ++ G +PF   +++ TLRN+          + S +SE   +
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGK 282
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
           D I  LL  DP  R+   +       HP+           LTP   PG   Q
Sbjct: 283 DFIRKLLLADPNTRMTIHQALE----HPW-----------LTPGNAPGRDSQ 319

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 99/269 (36%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +V E   GG +  L H Q  K F+   A     +V  AL++LH  GI +RDLKPEN+L  
Sbjct: 88  LVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
           S      + + DFDL                                           G 
Sbjct: 146 SPEKVSPVKICDFDLG-----------------------------------------SGM 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-----SGGSHGNAVDWWAFGIFIY 337
           K   + TP    +  P     C   G+ EY++PEV          +    D W+ G+ +Y
Sbjct: 165 KLNNSCTP----ITTPELTTPC---GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
Query: 338 EMIYGRTPFAA---------------PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI 382
            M+ G  PF                         +I +    FP +  + +S   A+DLI
Sbjct: 218 IMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISS-EAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S LL +D   RL     AA V  HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+          A P AA             PE+ 
Sbjct: 161 ------------------NEFTFGNKLDAFCG-----APPYAA-------------PELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
            ++
Sbjct: 245 KKF 247

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 65/244 (26%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      +VME+ SGG++    +   H R     AR    
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRF-FGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                             N F FG+K  +       F   P  A            +PE+
Sbjct: 161 ------------------NEFTFGNKLDE-------FCGSPPYA------------APEL 183
Query: 318 ASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSS 372
             G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + 
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 373 MSEY 376
           + ++
Sbjct: 244 LKKF 247

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
           E  +L  L+H ++   YA + E  NF              I ME+C  G L+ L H +  
Sbjct: 52  EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
            +      R +  ++L AL Y+H  GII+RDLKP N+ +    ++ + DF L+       
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                         RS    +  S  L        GS    T                 S
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSSDNLT-----------------S 189
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            +GT  YV+ EV  G  H N  +D ++ GI  +EMIY   PF+         NI+KK  +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYH---ARDLISGLLNKDPCNRLGSK 397
              + P    +      + +I  L++ DP  R G++
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+K+L+HP +  L+   E      ++ME+ SGG++    +   H R     AR    
Sbjct: 64  EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFR 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 161
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+          A P AA             PE+ 
Sbjct: 162 ------------------NEFTVGGKLDAFCG-----APPYAA-------------PELF 185
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 245
Query: 374 SEY 376
             +
Sbjct: 246 KRF 248

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 103/273 (37%), Gaps = 67/273 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
            D+DL + +G G  G V L    N+  ++         A+                 + E
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 55
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             I  ML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  +
Sbjct: 56  ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           ++  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 153
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                  +Y+ R  R LN+                             GT  YV+PE+  
Sbjct: 154 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 180
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
               H   VD W+ GI +  M+ G  P+  PS+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 119/290 (41%), Gaps = 70/290 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           R E E   LK+L HP +  LY          +V+E+ +GG+L    +    KR +    R
Sbjct: 55  RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFD--YIVEKKRMTEDEGR 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
            +  +++ A+EY H   I++RDLKPEN+L+  + ++ ++DF L   SN +          
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGL---SNIMTD-------- 160
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                               FL    GS       PN    A P        +    Y  
Sbjct: 161 ------------------GNFLKTSCGS-------PN---YAAP------EVINGKLYAG 186
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
           PE          VD W+ GI +Y M+ GR PF    ++  + N+ KK  +     P  +S
Sbjct: 187 PE----------VDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCVYVMPDFLS 232
Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
              A+ LI  ++  DP  R+  +    +++  P+F   N  L   L P E
Sbjct: 233 P-GAQSLIRRMIVADPMQRITIQ----EIRRDPWF---NVNLPDYLRPME 274

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I K LD+P +   +  FE  +F  +V+E C    L  L HK+  K  +   AR++  
Sbjct: 76  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 133
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           + +  ++YLH   +I+RDLK  N+ +  D  + + DF L                     
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 172
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTL-TPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                     +T++      F G +K     TPN                    Y++PEV
Sbjct: 173 ----------ATKIE-----FDGERKKDLCGTPN--------------------YIAPEV 197
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                H   VD W+ G  +Y ++ G+ PF     + T   I K   + P       S   
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 255
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
              LI  +L+ DP  R       A++ T  FF
Sbjct: 256 ---LIRRMLHADPTLR----PSVAELLTDEFF 280

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+RD+K +N+L+ 
Sbjct: 94  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+  D   C+                                            
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             +TP +        ++  + VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 166 --ITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L+ D       KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLDMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
           +  H F K
Sbjct: 267 LLQHQFLK 274

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +V E   GG + S  HK+ H  F+   A     +V  AL++LH  GI +RDLKPEN+L  
Sbjct: 88  LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
                  + + DFDL                                           G 
Sbjct: 146 HPNQVSPVKICDFDLG-----------------------------------------SGI 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIY 337
           K     +P    ++ P     C   G+ EY++PEV    S   ++     D W+ G+ +Y
Sbjct: 165 KLNGDCSP----ISTPELLTPC---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 338 EMIYGRTPF--------------AAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLI 382
            ++ G  PF              A P+ +  L  +I +    FP +  + +S   A+DLI
Sbjct: 218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S LL +D   RL     AA V  HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I K LD+P +   +  FE  +F  +V+E C    L  L HK+  K  +   AR++  
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           + +  ++YLH   +I+RDLK  N+ +  D  + + DF L                     
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTL-TPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                     +T++      F G +K     TPN                    Y++PEV
Sbjct: 189 ----------ATKIE-----FDGERKKDLCGTPN--------------------YIAPEV 213
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                H   VD W+ G  +Y ++ G+ PF     + T   I K   + P       S   
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
              LI  +L+ DP  R       A++ T  FF
Sbjct: 272 ---LIRRMLHADPTLR----PSVAELLTDEFF 296

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I K LD+P +   +  FE  +F  +V+E C    L  L HK+  K  +   AR++  
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           + +  ++YLH   +I+RDLK  N+ +  D  + + DF L                     
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGS-KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                     +T++      F G  KK    TPN                    Y++PEV
Sbjct: 189 ----------ATKIE-----FDGERKKXLCGTPN--------------------YIAPEV 213
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                H   VD W+ G  +Y ++ G+ PF     + T   I K   + P       S   
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
              LI  +L+ DP  R       A++ T  FF
Sbjct: 272 ---LIRRMLHADPTLR----PSVAELLTDEFF 296

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+RD+K +N+L+ 
Sbjct: 94  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+  D   C+                                            
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             +TP +        ++    VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 166 --ITPEQ--------SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L+ D       KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLDMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
           +  H F K
Sbjct: 267 LLQHQFLK 274

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E ++LK LDHP +  L+   E S+   IV E  +GG+L     K+  KRFS   A     
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
           +V   + Y+H   I++RDLKPEN+L+ S   D  I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           +GT  Y++PEV  G ++    D W+ G+ +Y ++ G  PF   +    L+ +      F 
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                ++S+  A+DLI  +L   P  R+     A     HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E ++LK LDHP +  L+   E S+   IV E  +GG+L     K+  KRFS   A     
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
           +V   + Y+H   I++RDLKPEN+L+ S   D  I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           +GT  Y++PEV  G ++    D W+ G+ +Y ++ G  PF   +    L+ +      F 
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                ++S+  A+DLI  +L   P  R+     A     HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E ++LK LDHP +  L+   E S+   IV E  +GG+L     K+  KRFS   A     
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
           +V   + Y+H   I++RDLKPEN+L+ S   D  I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           +GT  Y++PEV  G ++    D W+ G+ +Y ++ G  PF   +    L+ +      F 
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                ++S+  A+DLI  +L   P  R+     A     HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 114/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 67  EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 124 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCA----------------- 164
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   Q S  + R                 +  V  P             +++PE+ 
Sbjct: 165 --------QVSKEVPR----------------RKXLVGTPY------------WMAPELI 188
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 239
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 240 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 287
Query: 430 RQKT 433
           + +T
Sbjct: 288 QNRT 291

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+RD+K +N+L+ 
Sbjct: 94  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+  D   C+                                            
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             +TP +        ++    VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 166 --ITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L  D       KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
           +  H F K
Sbjct: 267 LLQHQFLK 274

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+RD+K +N+L+ 
Sbjct: 95  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+  D   C+                                            
Sbjct: 152 MDGSVKLT--DFGFCAQ------------------------------------------- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             +TP +        ++    VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 167 --ITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L  D       KRG+A +
Sbjct: 217 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 267
Query: 403 VKTHPFFK 410
           +  H F K
Sbjct: 268 LIQHQFLK 275

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 114/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +   +   +VMEF  GG L  +     H R +         
Sbjct: 71  EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 127
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL  LH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 128 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCA----------------- 168
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                   Q S  + R                 +  V  P             +++PE+ 
Sbjct: 169 --------QVSKEVPR----------------RKXLVGTPY------------WMAPELI 192
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
           S   +G  VD W+ GI + EM+ G  P+    NE  L+   +++  L      P  +   
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 243
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
           H      +  +  LL +DP  R      AA++  HPF             PP   +P MR
Sbjct: 244 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLA--------KAGPPASIVPLMR 291
Query: 430 RQKT 433
           + +T
Sbjct: 292 QNRT 295

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS---LRHKQPHKRFSLTSARF 195
           E  +LK LDHP +  LY  FE      +VME   GG+L     LR K     FS   A  
Sbjct: 54  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAV 108
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
              +VL    YLH   I++RDLKPEN+L+ S   D  I + DF LS
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
            V  +    +GT  Y++PEV     +    D W+ G+ +Y ++ G  PF   +++  L+ 
Sbjct: 158 EVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 216
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           + K   +F     + +S+  A+ L+  +L  +P  R+     A +   HP+ 
Sbjct: 217 VEKGKFSFDPPDWTQVSD-EAKQLVKLMLTYEPSKRI----SAEEALNHPWI 263

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 109/276 (39%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
           E  +L  L+H ++   YA + E  NF              I ME+C    L+ L H +  
Sbjct: 52  EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
            +      R +  ++L AL Y+H  GII+RDLKP N+ +    ++ + DF L+       
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                         RS    +  S  L        GS    T                 S
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSSDNLT-----------------S 189
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            +GT  YV+ EV  G  H N  +D ++ GI  +EMIY   PF+         NI+KK  +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYH---ARDLISGLLNKDPCNRLGSK 397
              + P    +      + +I  L++ DP  R G++
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 68/277 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           + + E + LK+  HP +  LY          +VME+ SGG+L     K  H R     AR
Sbjct: 57  KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR 114
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXX 253
               ++L A++Y H   +++RDLKPENVL+ +  +  ++DF LS + S+           
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------- 164
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                FL    GS       PN     E ++ R         Y 
Sbjct: 165 --------------------EFLRTSCGS-------PNYA-APEVISGRL--------YA 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
            PE          VD W+ G+ +Y ++ G  PF      T  + I       P     S+
Sbjct: 189 GPE----------VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 238
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +      L+  +L  DP  R   K    D++ H +FK
Sbjct: 239 AT-----LLMHMLQVDPLKRATIK----DIREHEWFK 266

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS---LRHKQPHKRFSLTSARF 195
           E  +LK LDHP +  LY  FE      +VME   GG+L     LR K     FS   A  
Sbjct: 71  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAV 125
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
              +VL    YLH   I++RDLKPEN+L+ S   D  I + DF LS
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI 358
           V  +    +GT  Y++PEV     +    D W+ G+ +Y ++ G  PF   +++  L+ +
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Query: 359 VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
            K   +F     + +S+  A+ L+  +L  +P  R+     A +   HP+ 
Sbjct: 235 EKGKFSFDPPDWTQVSD-EAKQLVKLMLTYEPSKRI----SAEEALNHPWI 280

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 68/277 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           + + E + LK+  HP +  LY          +VME+ SGG+L     K  H R     AR
Sbjct: 57  KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR 114
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXX 253
               ++L A++Y H   +++RDLKPENVL+ +  +  ++DF LS + S+           
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------- 164
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                FL    GS       PN     E ++ R         Y 
Sbjct: 165 --------------------EFLRDSCGS-------PNYA-APEVISGRL--------YA 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
            PE          VD W+ G+ +Y ++ G  PF      T  + I       P     S+
Sbjct: 189 GPE----------VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 238
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +      L+  +L  DP  R   K    D++ H +FK
Sbjct: 239 AT-----LLMHMLQVDPLKRATIK----DIREHEWFK 266

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 119/338 (35%), Gaps = 88/338 (26%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 26  DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 74
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYA 197
           ++L   + P++   Y  F +     I ME   GG L  +  K    P +     S     
Sbjct: 75  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI---- 130
Query: 198 AEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             V+  L YL     I++RD+KP N+LV S G       ++ LC   +            
Sbjct: 131 -AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVS----------- 171
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                                   + + + + SFVGT  Y+SPE
Sbjct: 172 ---------------------------------------GQLIDSMANSFVGTRSYMSPE 192
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSPSS 372
              G  +    D W+ G+ + EM  GR P  + S        L  IV +P   P + PS 
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP---PPKLPSG 249
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +     +D ++  L K+P  R   K+    +  H F K
Sbjct: 250 VFSLEFQDFVNKCLIKNPAERADLKQ----LMVHAFIK 283

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+ +GG L  +  +       + +      E L ALE+LH   +I+R++K +N+L+ 
Sbjct: 95  VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG + L+  D   C+                                            
Sbjct: 152 MDGSVKLT--DFGFCAQ------------------------------------------- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
             +TP +        ++  + VGT  +++PEV +  ++G  VD W+ GI   EMI G  P
Sbjct: 167 --ITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
           +    NE  LR   ++    T   Q+P  +S    RD ++  L  D       KRG+A +
Sbjct: 217 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 267
Query: 403 VKTHPFFK 410
           +  H F K
Sbjct: 268 LIQHQFLK 275

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I K+L+HP +  L+   E      +V E+ SGG++    +   H R     AR    
Sbjct: 63  EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFD--YLVAHGRXKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +++ A++Y H   I++RDLK EN+L+ +D +I ++DF  S                    
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                             N F    K+          A P AA             PE+ 
Sbjct: 161 ------------------NEFTFGNKLDAFCG-----APPYAA-------------PELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
            G  + G  VD W+ G+ +Y ++ G  PF   +     E  LR   + P    T   + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLL 244
Query: 374 SEY 376
            ++
Sbjct: 245 KKF 247

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 105/269 (39%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +V E   GG + S  HK+ H  F+   A     +V  AL++LH  GI +RDLKPEN+L  
Sbjct: 88  LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
                  + + DF L                                           G 
Sbjct: 146 HPNQVSPVKICDFGLG-----------------------------------------SGI 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIY 337
           K     +P    ++ P     C   G+ EY++PEV    S   ++     D W+ G+ +Y
Sbjct: 165 KLNGDCSP----ISTPELLTPC---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 338 EMIYGRTPF--------------AAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLI 382
            ++ G  PF              A P+ +  L  +I +    FP +  + +S   A+DLI
Sbjct: 218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           S LL +D   RL     AA V  HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 69/282 (24%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           +E +IL   DHP++  L   +       I++EFC GG + ++   +  +  +    +   
Sbjct: 65  VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVC 123
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L AL +LH   II+RDLK  NVL+  +G I L+DF +S                   
Sbjct: 124 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS------------------- 164
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                   +K ++TL             +  SF+GT  +++PEV
Sbjct: 165 ------------------------AKNLKTLQ------------KRDSFIGTPYWMAPEV 188
Query: 318 ASGGSHGNA-----VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPS 371
               +  +       D W+ GI + EM     P    +    L  I K  P T  T S  
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 248
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
           S+     RD +   L+K+P  R      AA +  HPF   + 
Sbjct: 249 SV---EFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 2   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF S  DL             L   + Y 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKPEN+L+ ++G I L+DF L+                   
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
           + 
Sbjct: 291 VT 292

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF S  DL             L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKPEN+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 69/282 (24%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           +E +IL   DHP++  L   +       I++EFC GG + ++   +  +  +    +   
Sbjct: 57  VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVC 115
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L AL +LH   II+RDLK  NVL+  +G I L+DF +S                   
Sbjct: 116 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS------------------- 156
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                   +K ++TL             +  SF+GT  +++PEV
Sbjct: 157 ------------------------AKNLKTLQ------------KRDSFIGTPYWMAPEV 180
Query: 318 ASGGSHGNA-----VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPS 371
               +  +       D W+ GI + EM     P    +    L  I K  P T  T S  
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 240
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
           S+     RD +   L+K+P  R      AA +  HPF   + 
Sbjct: 241 SV---EFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +Y    AE  A     IVME+  G  L  + H +    P +   +
Sbjct: 62  EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+++ +   + + DF +   + AI      
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                         G+   QT                 + +GT 
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S +    +++ + P+      
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           PS+  E  + DL + +L    K+P NR  +   AA+++        +   + +  PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF S  DL             L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 3   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF S  DL             L   + Y 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
           + 
Sbjct: 292 VT 293

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 103/278 (37%), Gaps = 72/278 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
           E  IL +  H  +  L+  FE+     ++ EF SG D+     +     F L       Y
Sbjct: 51  EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE---RINTSAFELNEREIVSY 107
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             +V  AL++LH   I + D++PEN++                                 
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENII--------------------------------- 134
Query: 257 XXXRSQTYTRQYSTRLSRFLNRF-FGSKKIQTLTPN---RLFVAEPVAARSCSFVGTHEY 312
                      Y TR S  +    FG  +   L P    RL    P            EY
Sbjct: 135 -----------YQTRRSSTIKIIEFGQAR--QLKPGDNFRLLFTAP------------EY 169
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
            +PEV        A D W+ G  +Y ++ G  PF A +N+  + NI+    TF  ++   
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +S   A D +  LL K+  +R+     A++   HP+ K
Sbjct: 230 IS-IEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +YA  EA         IVME+  G  L  + H +    P +   +
Sbjct: 62  EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+++ +   + + DF +   + AI      
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                         G+   QT                 + +GT 
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S      +++ + P+      
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           PS+  E  + DL + +L    K+P NR  +   AA+++        +   + +  PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 2   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKPEN+L+ ++G I L+DF L+                   
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
           + 
Sbjct: 291 VT 292

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 1   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKPEN+L+ ++G I L+DF L+                   
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
           + 
Sbjct: 290 VT 291

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 3   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKPEN+L+ ++G I L+DF L+                   
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
           + 
Sbjct: 292 VT 293

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G    ++ + + +G G  G V L      Y    G +     A+               R
Sbjct: 9   GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 59
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E   L++L HP +  LY   ++ +   +V+E+ +G +L    +     + S   AR 
Sbjct: 60  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 116
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           +  +++ A+EY H   I++RDLKPEN+L+    ++ ++DF L   SN +           
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 164
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                              FL    GS       PN    A P        +    Y  P
Sbjct: 165 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 191
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
           E          VD W+ G+ +Y M+  R PF   S     +NI     T P   SP    
Sbjct: 192 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 238
Query: 375 EYHARDLISGLLNKDPCNRL 394
              A  LI  +L  +P NR+
Sbjct: 239 ---AAGLIKRMLIVNPLNRI 255

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G    ++ + + +G G  G V L      Y    G +     A+               R
Sbjct: 10  GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 60
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E   L++L HP +  LY   ++ +   +V+E+ +G +L    +     + S   AR 
Sbjct: 61  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 117
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           +  +++ A+EY H   I++RDLKPEN+L+    ++ ++DF L   SN +           
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 165
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                              FL    GS       PN    A P        +    Y  P
Sbjct: 166 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 192
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
           E          VD W+ G+ +Y M+  R PF   S     +NI     T P   SP    
Sbjct: 193 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 239
Query: 375 EYHARDLISGLLNKDPCNRL 394
              A  LI  +L  +P NR+
Sbjct: 240 ---AAGLIKRMLIVNPLNRI 256

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 119/341 (34%), Gaps = 88/341 (25%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G       ++ LC                   
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCD------------------ 148
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG               + + + + SFVGT  Y+SPE   
Sbjct: 149 --------------------FGVS------------GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----------LRNIVKKPLTFPTQS 369
           G  +    D W+ G+ + EM  GR P   P  +            L  IV +P   P + 
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEP---PPKL 233
Query: 370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           PS +     +D ++  L K+P  R   K+    +  H F K
Sbjct: 234 PSGVFSLEFQDFVNKCLIKNPAERADLKQ----LMVHAFIK 270

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 57/206 (27%)
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLV 202
           K L H  +      F  + F  I ME   GG L +L R K    + +  +  FY  ++L 
Sbjct: 74  KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQ 262
            L+YLH   I++RD+K +NVL+ +                                    
Sbjct: 134 GLKYLHDNQIVHRDIKGDNVLINT------------------------------------ 157
Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG- 321
                YS  L   ++ F  SK++  + P            + +F GT +Y++PE+   G 
Sbjct: 158 -----YSGVLK--ISDFGTSKRLAGINPC-----------TETFTGTLQYMAPEIIDKGP 199
Query: 322 -SHGNAVDWWAFGIFIYEMIYGRTPF 346
             +G A D W+ G  I EM  G+ PF
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 70/274 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E + LK+  HP +  LY      +   +VME+ SGG+L     K  + R     +R    
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQ 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXXXXXX 257
           ++L  ++Y H   +++RDLKPENVL+ +  +  ++DF LS + S+               
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-------------- 169
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                            FL    GS       PN    A P        +    Y  PE 
Sbjct: 170 ----------------EFLRXSCGS-------PN---YAAP------EVISGRLYAGPE- 196
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSMSEY 376
                    VD W+ G+ +Y ++ G  PF      T  + I       P   +PS +S  
Sbjct: 197 ---------VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS-- 245
Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
               L+  +L  DP  R   K    D++ H +FK
Sbjct: 246 ----LLKHMLQVDPMKRATIK----DIREHEWFK 271

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G    ++ + + +G G  G V L      Y    G +     A+               R
Sbjct: 4   GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 54
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E E   L++L HP +  LY   ++ +   +V+E+ +G +L    +     + S   AR 
Sbjct: 55  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 111
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           +  +++ A+EY H   I++RDLKPEN+L+    ++ ++DF L   SN +           
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 159
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                              FL    GS       PN    A P        +    Y  P
Sbjct: 160 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 186
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
           E          VD W+ G+ +Y M+  R PF   S     +NI     T P   SP    
Sbjct: 187 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 233
Query: 375 EYHARDLISGLLNKDPCNRL 394
              A  LI  +L  +P NR+
Sbjct: 234 ---AAGLIKRMLIVNPLNRI 250

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL +           L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 112/308 (36%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
           H+P C  YA+                 E+ +  LK +D       HP +  L   +E + 
Sbjct: 38  HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
           F  +V +    G+L     ++     S    R     +L  +  LH L I++RDLKPEN+
Sbjct: 98  FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
           L+  D +I L+DF  S                                       +    
Sbjct: 156 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 177
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
           +K++++     ++A  +    CS    H            +G  VD W+ G+ +Y ++ G
Sbjct: 178 EKLRSVCGTPSYLAPEII--ECSMNDNHP----------GYGKEVDMWSTGVIMYTLLAG 225
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
             PF        LR I+     F +      S+   +DL+S  L   P  R  ++   A 
Sbjct: 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT-VKDLVSRFLVVQPQKRYTAEEALA- 283
Query: 403 VKTHPFFK 410
              HPFF+
Sbjct: 284 ---HPFFQ 288

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +Y    AE  A     IVME+  G  L  + H +    P +   +
Sbjct: 62  EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+++ +   + + DF +   + AI      
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                         G+   QT                 + +GT 
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S      +++ + P+      
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           PS+  E  + DL + +L    K+P NR  +   AA+++        +   + +  PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +Y    AE  A     IVME+  G  L  + H +    P +   +
Sbjct: 62  EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+++ +   + + DF +   + AI      
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                         G+   QT                 + +GT 
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S      +++ + P+      
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           PS+  E  + DL + +L    K+P NR  +   AA+++        +   + +  PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 2   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 2   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYTHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
           + 
Sbjct: 291 VT 292

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 65/261 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           R E E   L++L HP +  LY   ++ +   +V+E+ +G +L    +     + S   AR
Sbjct: 50  RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEAR 106
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
            +  +++ A+EY H   I++RDLKPEN+L+    ++ ++DF L   SN +          
Sbjct: 107 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD-------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                               FL    GS       PN    A P        +    Y  
Sbjct: 156 ------------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAG 181
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSM 373
           PE          VD W+ G+ +Y M+  R PF   S     +NI     T P   SP   
Sbjct: 182 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG-- 229
Query: 374 SEYHARDLISGLLNKDPCNRL 394
               A  LI  +L  +P NR+
Sbjct: 230 ----AAGLIKRMLIVNPLNRI 246

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 1   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
           + 
Sbjct: 290 VT 291

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 1   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
           + 
Sbjct: 290 VT 291

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 2   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALXKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 1   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALXKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 2   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 9   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 58
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 59  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 157
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 158 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 182
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 243 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 297
Query: 413 N 413
Sbjct: 298 T 298

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 5   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 54
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 55  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 113
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 154
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 155 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 178
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 239 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 293
Query: 412 LN 413
           + 
Sbjct: 294 VT 295

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 1   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
           + 
Sbjct: 290 VT 291

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 2   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 123/359 (34%), Gaps = 97/359 (27%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           +F    +IG G  G VY      K R     E   L  +                A  E 
Sbjct: 3   NFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIREI 52
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +LK L+HP +  L       N   +V EF    DL             L   + Y  ++
Sbjct: 53  SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
           L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                      
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---------------------- 149
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                            R FG        P R +  E         V T  Y +PE+  G
Sbjct: 150 -----------------RAFG-------VPVRTYTHE---------VVTLWYRAPEILLG 176
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------------------- 360
              +  AVD W+ G    EM+  R  F   S    L  I +                   
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 361 KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
           KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ + 
Sbjct: 237 KP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDVT 290

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 1   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 9   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 58
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 59  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 157
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 158 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 182
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 243 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 297
Query: 413 N 413
Sbjct: 298 T 298

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 3   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
           + 
Sbjct: 292 VT 293

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 123/359 (34%), Gaps = 97/359 (27%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 1   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
           +E  IL   DHP +  L   F   N   I++EFC+GG  D   L  ++P    + +  + 
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              + L AL YLH   II+RDLK  N+L   DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 3   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
           + 
Sbjct: 292 VT 293

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
           +E  IL   DHP +  L   F   N   I++EFC+GG  D   L  ++P    + +  + 
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              + L AL YLH   II+RDLK  N+L   DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 57/206 (27%)
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLV 202
           K L H  +      F  + F  I ME   GG L +L R K    + +  +  FY  ++L 
Sbjct: 60  KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQ 262
            L+YLH   I++RD+K +NVL+ +                                    
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINT------------------------------------ 143
Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG- 321
                YS  L   ++ F  SK++  + P            + +F GT +Y++PE+   G 
Sbjct: 144 -----YSGVLK--ISDFGTSKRLAGINPC-----------TETFTGTLQYMAPEIIDKGP 185
Query: 322 -SHGNAVDWWAFGIFIYEMIYGRTPF 346
             +G A D W+ G  I EM  G+ PF
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 121/349 (34%), Gaps = 94/349 (26%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM--- 138
            D + +IG G  G V L    +  RQ                           R E+   
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQ---------------VAVKMMDLRKQQRRELLFN 91
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I++   H  +  +Y  +       ++MEF  GG L  +  +    R +         
Sbjct: 92  EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCE 148
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            VL AL YLH  G+I+RD+K +++L+  DG + LSDF    C+                 
Sbjct: 149 AVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDF--GFCAQ---------------- 190
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            +++    +K    TP   ++A  V +RS               
Sbjct: 191 -----------------ISKDVPKRKXLVGTP--YWMAPEVISRSL-------------- 217
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
               +   VD W+ GI + EM+ G  P+ + S    ++ +   P       P  +   H 
Sbjct: 218 ----YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-------PPKLKNSHK 266
Query: 379 -----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
                RD +  +L +DP  R      A ++  HPF   L   L   L P
Sbjct: 267 VSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECLVP 309

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 124/363 (34%), Gaps = 97/363 (26%)
Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
           +   +F    +IG G  G VY      K R     E   L  +                A
Sbjct: 4   VDMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----A 53
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E  +LK L+HP +  L       N   +V EF    DL             L   + Y
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 112
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                  
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------ 154
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                R FG        P R +  E         V T  Y +PE
Sbjct: 155 ---------------------RAFG-------VPVRTYTHE---------VVTLWYRAPE 177
Query: 317 VASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK--------------- 360
           +  G   +  AVD W+ G    EM+  R  F   S    L  I +               
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 361 ----KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
               KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+
Sbjct: 238 MPDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 292
Query: 411 GLN 413
            + 
Sbjct: 293 DVT 295

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 2   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +PE+ 
Sbjct: 151 -------------------RAFG-------VPVRTYTHEVV---------TLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
           +E  IL   DHP +  L   F   N   I++EFC+GG  D   L  ++P    + +  + 
Sbjct: 83  VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              + L AL YLH   II+RDLK  N+L   DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E         V T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 2   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V EF    DL             L   + Y 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
           + 
Sbjct: 291 VT 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 1   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 150 -------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 1   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 150 -------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 117/331 (35%), Gaps = 78/331 (23%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 10  DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 59  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 116
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G       ++ LC                   
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCD------------------ 151
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG               + +   +  FVGT  Y+SPE   
Sbjct: 152 --------------------FGVS------------GQLIDEMANEFVGTRSYMSPERLQ 179
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
           G  +    D W+ G+ + EM  GR P    +    L  IV +P   P + PS++     +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP---PPKLPSAVFSLEFQ 236
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           D ++  L K+P  R   K+    +  H F K
Sbjct: 237 DFVNKCLIKNPAERADLKQ----LMVHAFIK 263

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 3   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 52
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V EF    DL             L   + Y  
Sbjct: 53  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 151
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +PE+ 
Sbjct: 152 -------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEIL 176
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 237 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 291
Query: 413 N 413
Sbjct: 292 T 292

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 75/267 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +Y    AE  A     IVME+  G  L  + H +    P +   +
Sbjct: 79  EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 138
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+++ +   + + DF +   + AI      
Sbjct: 139 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 186
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                         G+   QT                 + +GT 
Sbjct: 187 ------------------------------GNSVTQT----------------AAVIGTA 200
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S      +++ + P+      
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 255
Query: 370 PSSMSEYHARDLISGLLN---KDPCNR 393
           PS+  E  + DL + +L    K+P NR
Sbjct: 256 PSARHEGLSADLDAVVLKALAKNPENR 282

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 116/300 (38%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
           E +    L+HP +  +Y    AE  A     IVME+  G  L  + H +    P +   +
Sbjct: 62  EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
                  A+   AL + H  GII+RD+KP N+L+ +   + + D                
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANILISATNAVKVVD---------------- 159
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                        FG  +    + N +        ++ + +GT 
Sbjct: 160 -----------------------------FGIARAIADSGNSVX-------QTAAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
           +Y+SPE A G S     D ++ G  +YE++ G  PF   S      +++ + P+      
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           PS+  E  + DL + +L    K+P NR  +   AA+++        +   + +  PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
             +F    +IG G  G VY      K R     E   L  +                A  
Sbjct: 1   MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L+HP +  L       N   +V E     DL +           L   + Y  
Sbjct: 51  EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                    
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E         V T  Y +PE+ 
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
            G   +  AVD W+ G    EM+  R  F   S    L  I +                 
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 123/362 (33%), Gaps = 97/362 (26%)
Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           +  +F    +IG G  G VY      K R     E   L  +                A 
Sbjct: 4   SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  +LK L+HP +  L       N   +V E     DL             L   + Y 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
            ++L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                   
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               R FG        P R +  E V         T  Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
             G   +  AVD W+ G    EM+  R  F   S    L  I +                
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              KP +FP  +    S+         R L+S +L+ DP  R+ +K   A    HPFF+ 
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
           + 
Sbjct: 293 VT 294

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 52/207 (25%)
Query: 139 EKKILKMLDHP----FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           E K+++ L+HP    F+  LY + +  NF   + E+  GG L  +  K    ++  +   
Sbjct: 57  EVKVMRCLEHPNVLKFIGVLYKD-KRLNF---ITEYIKGGTLRGI-IKSMDSQYPWSQRV 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
            +A ++   + YLH + II+RDL   N LVR + +++++DF L+                
Sbjct: 112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA---------------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL-FVAEPVAARSCSFVGTHEYV 313
                                  R    +K Q   P  L  + +P   +  + VG   ++
Sbjct: 156 -----------------------RLMVDEKTQ---PEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMI 340
           +PE+ +G S+   VD ++FGI + E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA-APSN--ETTLRNIVKKPLTF 365
           T  +V+PEV     +    D W+ GI +Y M+ G TPFA  PS+  E  L  I     T 
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
              + +++SE  A+DL+S +L+ DP  RL +K+    V  HP+ 
Sbjct: 248 SGGNWNTVSET-AKDLVSKMLHVDPHQRLTAKQ----VLQHPWV 286

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 81  DFDLHRRIGAGDIGTV---YLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           D++L   IG+G    V   Y      K    R +   C  +M                 E
Sbjct: 11  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD----------------E 54
Query: 138 MEKKILKM--LDHPFLPTLYAEFEASNFSCIVMEFCSGGD-LHSLRH---KQPHKRFSLT 191
           + K+I  M    HP + + Y  F   +   +VM+  SGG  L  ++H   K  HK   L 
Sbjct: 55  LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 192 SARFYAA--EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +       EVL  LEYLH  G I+RD+K  N+L+  DG + ++DF +S
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 109/301 (36%), Gaps = 87/301 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L HP + +L     +     +V EF    DL  +  +        +  + Y  
Sbjct: 69  EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLY 126
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  + + H   I++RDLKP+N+L+ SDG + L+DF L+                    
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA-------------------- 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +P+V 
Sbjct: 167 -------------------RAFG-------IPVRSYTHEVV---------TLWYRAPDVL 191
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
            G   +  +VD W+ G    EMI G+  F   +++  L  I                   
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 359 VKKPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           + K  TF        S           DL+S +L  DP  R+ ++    D   HP+FK L
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR----DAMNHPYFKDL 307
Query: 413 N 413
           +
Sbjct: 308 D 308

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 81  DFDLHRRIGAGDIGTV---YLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
           D++L   IG+G    V   Y      K    R +   C  +M                 E
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD----------------E 59
Query: 138 MEKKILKM--LDHPFLPTLYAEFEASNFSCIVMEFCSGGD-LHSLRH---KQPHKRFSLT 191
           + K+I  M    HP + + Y  F   +   +VM+  SGG  L  ++H   K  HK   L 
Sbjct: 60  LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119
Query: 192 SARFYAA--EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +       EVL  LEYLH  G I+RD+K  N+L+  DG + ++DF +S
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 109/301 (36%), Gaps = 87/301 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L HP + +L     +     +V EF    DL  +  +        +  + Y  
Sbjct: 69  EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLY 126
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  + + H   I++RDLKP+N+L+ SDG + L+DF L+                    
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA-------------------- 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +P+V 
Sbjct: 167 -------------------RAFG-------IPVRSYTHEVV---------TLWYRAPDVL 191
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
            G   +  +VD W+ G    EMI G+  F   +++  L  I                   
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 359 VKKPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           + K  TF        S           DL+S +L  DP  R+ ++    D   HP+FK L
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR----DAMNHPYFKDL 307
Query: 413 N 413
           +
Sbjct: 308 D 308

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA-APSN--ETTLRNIVKKPLTF 365
           T  +V+PEV     +    D W+ GI +Y M+ G TPFA  PS+  E  L  I     T 
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
              + +++SE  A+DL+S +L+ DP  RL +K+    V  HP+ 
Sbjct: 248 SGGNWNTVSET-AKDLVSKMLHVDPHQRLTAKQ----VLQHPWV 286

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           K +++++D      LY E +   +  +VME+C  G +  +    P KRF +  A  Y  +
Sbjct: 66  KNVIQLVD-----VLYNEEKQKMY--MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  LEYLH  GI+++D+KP N+L+ + G + +S   ++
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 287 TLTPNRLFVAE---PVAAR-SC-SFVGTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEM 339
           TL  + L VAE   P AA  +C +  G+  +  PE+A+G     G  VD W+ G+ +Y +
Sbjct: 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
Query: 340 IYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
             G  PF   +      NI K     P      +S     DL+ G+L  +P  R   ++ 
Sbjct: 207 TTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS-----DLLKGMLEYEPAKRFSIRQ- 260
Query: 400 AADVKTHPFFK 410
              ++ H +F+
Sbjct: 261 ---IRQHSWFR 268

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 110/308 (35%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
           H+P C  YA+                 E+ +  LK +D       HP +  L   +E + 
Sbjct: 25  HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 84
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
           F  +V +    G+L     ++     S    R     +L  +  LH L I++RDLKPEN+
Sbjct: 85  FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 142
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
           L+  D +I L+DF  S                                       +    
Sbjct: 143 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
           +K++ +     ++A  +    CS    H     EV          D W+ G+ +Y ++ G
Sbjct: 165 EKLREVCGTPSYLAPEII--ECSMNDNHPGYGKEV----------DMWSTGVIMYTLLAG 212
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
             PF        LR I+     F +      S+   +DL+S  L   P  R  ++   A 
Sbjct: 213 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD-TVKDLVSRFLVVQPQKRYTAEEALA- 270
Query: 403 VKTHPFFK 410
              HPFF+
Sbjct: 271 ---HPFFQ 275

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 110/308 (35%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
           H+P C  YA+                 E+ +  LK +D       HP +  L   +E + 
Sbjct: 38  HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
           F  +V +    G+L     ++     S    R     +L  +  LH L I++RDLKPEN+
Sbjct: 98  FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
           L+  D +I L+DF  S                                       +    
Sbjct: 156 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 177
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
           +K++ +     ++A  +    CS    H     EV          D W+ G+ +Y ++ G
Sbjct: 178 EKLREVCGTPSYLAPEII--ECSMNDNHPGYGKEV----------DMWSTGVIMYTLLAG 225
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
             PF        LR I+     F +      S+   +DL+S  L   P  R  ++   A 
Sbjct: 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT-VKDLVSRFLVVQPQKRYTAEEALA- 283
Query: 403 VKTHPFFK 410
              HPFF+
Sbjct: 284 ---HPFFQ 288

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 112/315 (35%), Gaps = 77/315 (24%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
            RIG G  G V+   ++N+ +Q           +                 + E  +L  
Sbjct: 29  ERIGKGSFGEVF-KGIDNRTQQ----------VVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
            D  ++   Y  +   +   I+ME+  GG    L    P   F + +      E+L  L+
Sbjct: 78  CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIAT---MLKEILKGLD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH    I+RD+K  NVL+   G + L+DF ++                           
Sbjct: 135 YLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA--------------------------G 168
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
           +   T++ R  N F G                           T  +++PEV    ++ +
Sbjct: 169 QLTDTQIKR--NTFVG---------------------------TPFWMAPEVIQQSAYDS 199
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA--RDLIS 383
             D W+ GI   E+  G  P    S+   +R +   P   P   P+ + ++    ++ I 
Sbjct: 200 KADIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNP---PTLVGDFTKSFKEFID 253
Query: 384 GLLNKDPCNRLGSKR 398
             LNKDP  R  +K 
Sbjct: 254 ACLNKDPSFRPTAKE 268

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 120/334 (35%), Gaps = 81/334 (24%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           F++   +G G    VY C      +Q    +P  L  +                   E  
Sbjct: 55  FEVESELGRGATSIVYRC------KQKGTQKPYALKVLKKTVDKKI--------VRTEIG 100
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           +L  L HP +  L   FE      +V+E  +GG+L     ++ +  +S   A     ++L
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQIL 158
Query: 202 VALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            A+ YLH  GI++RDLKPEN+L  +   D  + ++DF LS                    
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS------------------KI 200
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
              Q   +                      TP       P   R C++        PEV 
Sbjct: 201 VEHQVLMKTVCG------------------TPG---YCAPEILRGCAY-------GPEV- 231
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTFPTQSPSSMSEYH 377
                    D W+ GI  Y ++ G  PF     ++   R I+     F +     +S  +
Sbjct: 232 ---------DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS-LN 281
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           A+DL+  L+  DP  RL + +       HP+  G
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
           +  S+ SE  A+D I  LL KDP  R+
Sbjct: 240 EYFSNTSEL-AKDFIRRLLVKDPKRRM 265

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
           +  S+ SE  A+D I  LL KDP  R+
Sbjct: 254 EYFSNTSEL-AKDFIRRLLVKDPKRRM 279

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 67  RSATFGRKTGLTFRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXX 125
           R + F       F D +D+   +G G    V  C           H+   L         
Sbjct: 15  RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCV----------HKTTGLEFAAKIINT 64
Query: 126 XXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH 185
                    + E E +I + L HP +  L+   +  +F  +V +  +GG+L         
Sbjct: 65  KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAR 122
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
           + +S   A     ++L ++ Y H  GI++R+LKPEN+L+ S      + L+DF L++  N
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT  Y+SPEV     +   VD WA G+ +Y ++ G  PF           I      +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
           P+    +++   A+ LI  +L  +P  R+ + + 
Sbjct: 250 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 282

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT E+ +PEVA G   G   D W+ G+  Y ++ G +PF   +++ TLRN+        
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
             + S +SE   +D I  LL  DP  R+   +       HP+           LTP   P
Sbjct: 377 DSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALE----HPW-----------LTPGNAP 420
Query: 427 GMRRQ 431
           G   Q
Sbjct: 421 GRDSQ 425

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
           +  S+ SE  A+D I  LL KDP  R+
Sbjct: 233 EYFSNTSEL-AKDFIRRLLVKDPKRRM 258

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 82  FDLHRRIGAGDIGTVYLCS--------LNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
           F   R++G+G  G V+L          +     +DR   P                    
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-------------------M 64
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E ++LK LDHP +  ++  FE  +   IVME C GG+L   R      R    S 
Sbjct: 65  EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLE-RIVSAQARGKALSE 123
Query: 194 RFYAA---EVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLS 238
            + A    +++ AL Y H   ++++DLKPEN+L +       I + DF L+
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 93/323 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++++ HP +  L A F ++       F  +V+E+       + RH    K+   + 
Sbjct: 82  ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXX 250
             + Y  ++L +L Y+H +GI +RD+KP+N+L+    G + L D                
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLID---------------- 185
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                        FGS KI       L   EP  +  CS     
Sbjct: 186 -----------------------------FGSAKI-------LIAGEPNVSXICS----R 205
Query: 311 EYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT----- 364
            Y +PE+  G + +   +D W+ G  + E++ G+  F   S    L  I+K   T     
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
Query: 365 ------------FPTQSPSSMSEY-------HARDLISGLLNKDPCNRLGSKRGAADVKT 405
                       FP   P   S+         A DLIS LL   P  RL     A +   
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL----TAIEALC 321
Query: 406 HPFFKGLNFALIRSLTPPEIPGM 428
           HPFF  L     R     E+P +
Sbjct: 322 HPFFDELRTGEARMPNGRELPPL 344

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I ++L HP +  L+       F  +V +  +GG+L         + +S   A
Sbjct: 48  QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
                ++L ++ + H+ GI++RDLKPEN+L+ S      + L+DF L++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT  Y+SPEV     +G  VD WA G+ +Y ++ G  PF         + I      F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           P+    +++   A+DLI+ +L  +P  R+     A++   HP+ 
Sbjct: 226 PSPEWDTVTP-EAKDLINKMLTINPAKRI----TASEALKHPWI 264

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 72/282 (25%)
Query: 70  TFGRKTG-LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
           T  +K G L   DF+    +GAG+ G V+  S          H+P  L  M         
Sbjct: 57  TQKQKVGELKDDDFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEI 105
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                ++   E ++L   + P++   Y  F +     I ME   GG L  +  K    R 
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRI 163
Query: 189 SLTSARFYAAEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXX 247
                   +  V+  L YL     I++RD+KP N+LV S G I L DF +S         
Sbjct: 164 PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------- 214
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                   +    N F G                          
Sbjct: 215 ---------------------GQLIDSMANSFVG-------------------------- 227
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
            T  Y+SPE   G  +    D W+ G+ + EM  GR P   P
Sbjct: 228 -TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 268

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 112/318 (35%), Gaps = 108/318 (33%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  +LK ++H  + +L   F      E      +VME         +  +  H+R 
Sbjct: 67  RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 126
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+          
Sbjct: 127 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                            R  ST                 +TP               +V 
Sbjct: 172 -----------------RTASTNF--------------MMTP---------------YVV 185
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
           T  Y +PEV  G  +   VD W+ G  + E++ G   F                  PS E
Sbjct: 186 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 353 ------TTLRNIVKK--------------PLTFPTQSP-SSMSEYHARDLISGLLNKDPC 391
                  T+RN V+                  FP++S    +    ARDL+S +L  DP 
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 392 NRLGSKRGAADVKTHPFF 409
            R+           HP+ 
Sbjct: 306 KRISVDEAL----RHPYI 319

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I ++L HP +  L+       F  +V +  +GG+L         + +S   A
Sbjct: 48  QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
                ++L ++ + H+ GI++RDLKPEN+L+ S      + L+DF L++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            F GT  Y+SPEV     +G  VD WA G+ +Y ++ G  PF         + I      
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           FP+    +++   A+DLI+ +L  +P  R+     A++   HP+ 
Sbjct: 225 FPSPEWDTVTP-EAKDLINKMLTINPAKRI----TASEALKHPWI 264

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 238 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 275

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            F GT  Y+SPEV     +G  VD WA G+ +Y ++ G  PF         + I      
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           FP+    +++   A+DLI+ +L  +P  R+     AA+   HP+ 
Sbjct: 243 FPSPEWDTVTP-EAKDLINKMLTINPSKRI----TAAEALKHPWI 282

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 238 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 275

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 113/318 (35%), Gaps = 108/318 (33%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  +LK ++H  + +L   F      E      +VME         +  +  H+R 
Sbjct: 69  RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+          
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------- 173
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                                T  + F+           +TP               +V 
Sbjct: 174 --------------------RTACTNFM-----------MTP---------------YVV 187
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
           T  Y +PEV  G  +   VD W+ G  + E++ G   F                  PS E
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 353 ------TTLRNIVKK--------------PLTFPTQSP-SSMSEYHARDLISGLLNKDPC 391
                  T+RN V+                  FP++S    +    ARDL+S +L  DP 
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 392 NRLGSKRGAADVKTHPFF 409
            R+           HP+ 
Sbjct: 308 KRISVDEAL----RHPYI 321

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 65/214 (30%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFY 196
           +E + L  ++HP +  LY      N  C+VME+  GG L+++ H  +P   ++   A  +
Sbjct: 51  VELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 197 AAEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +    + YLH +    +I+RDLKP N+L+ + G +      L +C             
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV------LKICD------------ 150
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQT-LTPNRLFVAEPVAARSCSFVGTHEY 312
                                    F  +  IQT +T N+               G+  +
Sbjct: 151 -------------------------FGTACDIQTHMTNNK---------------GSAAW 170
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
           ++PEV  G ++    D +++GI ++E+I  R PF
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG---DLHSLRHKQPHKRFSLTSARF 195
           E  I++  D P +   Y  +  +    IVME+C  G   D+  LR+K      +LT    
Sbjct: 74  EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK------TLTEDEI 127
Query: 196 YA--AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                  L  LEYLH +  I+RD+K  N+L+ ++GH  L+DF ++
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            F GT  Y+SPEV     +G  VD WA G+ +Y ++ G  PF         + I      
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           FP+    +++   A+DLI+ +L  +P  R+     AA+   HP+ 
Sbjct: 232 FPSPEWDTVTP-EAKDLINKMLTINPSKRI----TAAEALKHPWI 271

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           +  S  SE  A+D I  LL K+   RL  +        HP+   ++   A++R  +   +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
              R+Q
Sbjct: 295 ENFRKQ 300

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 65/214 (30%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFY 196
           +E + L  ++HP +  LY      N  C+VME+  GG L+++ H  +P   ++   A  +
Sbjct: 50  VELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 197 AAEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
             +    + YLH +    +I+RDLKP N+L+ + G +      L +C             
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV------LKICD------------ 149
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQT-LTPNRLFVAEPVAARSCSFVGTHEY 312
                                    F  +  IQT +T N+               G+  +
Sbjct: 150 -------------------------FGTACDIQTHMTNNK---------------GSAAW 169
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
           ++PEV  G ++    D +++GI ++E+I  R PF
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           +  S  SE  A+D I  LL K+   RL  +        HP+   ++   A++R  +   +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
              R+Q
Sbjct: 295 ENFRKQ 300

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 61/206 (29%)
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++  A+E+LH  G+++RDLKP N+    D  + + DF L    +                
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ--------------- 170
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                   ++   LTP       P  AR    VGT  Y+SPE  
Sbjct: 171 ----------------------DEEEQTVLTPM------PAYARHTGQVGTKLYMSPEQI 202
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKPL---TFPTQ--- 368
            G S+ + VD ++ G+ ++E++Y   PF+         T +RN+   PL    +P +   
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM 259
Query: 369 -----SPSSMSEYHARDLISGLLNKD 389
                SPS M    A ++I   + +D
Sbjct: 260 VQDMLSPSPMERPEAINIIENAVFED 285

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I + L HP +  L+   +  +F  +V +  +GG+L         + +S   A
Sbjct: 50  QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 107
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
                ++L ++ Y H  GI++R+LKPEN+L+ S      + L+DF L++  N
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT  Y+SPEV     +   VD WA G+ +Y ++ G  PF           I      +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
           P+    +++   A+ LI  +L  +P  R+ + + 
Sbjct: 227 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 259

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           + E  +L   D P++   +  +  S    I+ME+  GG    L    P +   + +    
Sbjct: 65  QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATI--- 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             E+L  L+YLH    I+RD+K  NVL+   G + L+DF ++                  
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------ 163
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    +   T++ R  N F G                           T  +++PE
Sbjct: 164 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 186
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V    ++    D W+ GI   E+  G  P    S+   +R +       P  SP ++   
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP---NSDLHPMRVL----FLIPKNSPPTLEGQ 239
Query: 377 HA---RDLISGLLNKDP 390
           H+   ++ +   LNKDP
Sbjct: 240 HSKPFKEFVEACLNKDP 256

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-------LRNIVKK 361
           T  Y +PE+ +   +  + D W+ G+ +Y M+ G+ PF +     T       ++ I K 
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
             +F  ++  ++S+  A+DLI GLL  DP  RL
Sbjct: 232 DFSFEGEAWKNVSQ-EAKDLIQGLLTVDPNKRL 263

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I + L HP +  L+   +  +F  +V +  +GG+L         + +S   A
Sbjct: 49  QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 106
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
                ++L ++ Y H  GI++R+LKPEN+L+ S      + L+DF L++  N
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT  Y+SPEV     +   VD WA G+ +Y ++ G  PF           I      +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
           P+    +++   A+ LI  +L  +P  R+ + + 
Sbjct: 226 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 258

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 56/205 (27%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L H  + ++    E  +   +VME+  G  L    + + H   S+ +A  +  ++L  ++
Sbjct: 68  LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS--EYIESHGPLSVDTAINFTNQILDGIK 125
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           + H + I++RD+KP+N+L+ S+  + + D                               
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFD------------------------------- 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                         FG  K          ++E    ++   +GT +Y SPE A G +   
Sbjct: 155 --------------FGIAK---------ALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPS 350
             D ++ GI +YEM+ G  PF   +
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGET 216

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I + L HP +  L+   +  +F  +V +  +GG+L         + +S   A
Sbjct: 50  QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 107
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
                ++L ++ Y H  GI++R+LKPEN+L+ S      + L+DF L++  N
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           F GT  Y+SPEV     +   VD WA G+ +Y ++ G  PF           I      +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
           P+    +++   A+ LI  +L  +P  R+ + + 
Sbjct: 227 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 259

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
           L  P +  LY       +  I ME   GG L  L  +Q   P  R     A +Y  + L 
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALE 177
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
            LEYLH   I++ D+K +NVL+ SDG H  L DF  ++C
Sbjct: 178 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 216

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
            +GT EY++PE+ +      A D W  GI  Y ++   +PF    N+ T  NI +  + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV-KTHPFFKGLNF 414
             ++ SS+S+  A D I  LL K+P      KR  A++  +H + +  +F
Sbjct: 253 SEETFSSVSQL-ATDFIQSLLVKNP-----EKRPTAEICLSHSWLQQWDF 296

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           +  S  SE  A+D I  LL K+   RL  +        HP+   ++   A++R  +   +
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
              R+Q
Sbjct: 295 ENFRKQ 300

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 71/270 (26%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVME-FCSGGDLHSLRHKQPHKRFSLTSA 193
           +  +E  IL  ++H  +  +   FE   F  +VME   SG DL +   + P  R     A
Sbjct: 75  KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLA 132
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
            +   +++ A+ YL +  II+RD+K EN+++  D  I L D                   
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID------------------- 173
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     FGS     L   +LF          +F GT EY 
Sbjct: 174 --------------------------FGSAAY--LERGKLFY---------TFCGTIEYC 196
Query: 314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           +PEV  G  + G  ++ W+ G+ +Y +++   PF     E T+   +  P      S   
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC--ELEETVEAAIHPPYLV---SKEL 251
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
           MS      L+SGLL   P  R   ++   D
Sbjct: 252 MS------LVSGLLQPVPERRTTLEKLVTD 275

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           +  S  SE  A+D I  LL K+   RL  +        HP+   ++   A++R  +   +
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
              R+Q
Sbjct: 295 ENFRKQ 300

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
           L  P +  LY       +  I ME   GG L  L  +Q   P  R     A +Y  + L 
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALE 196
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
            LEYLH   I++ D+K +NVL+ SDG H  L DF  ++C
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 235

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
           E  I  ML HP +  L   + +     +V EF  G DL    ++       +S   A  Y
Sbjct: 76  EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
             ++L AL Y H   II+RD+KPENVL+ S  +   + L DF +++
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI 181

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           VGT  +++PEV     +G  VD W  G+ ++ ++ G  PF   + E     I+K      
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            +  S +SE  A+DL+  +L  DP  R+       +   HP+ K  +    +   P  + 
Sbjct: 253 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLKERDRYAYKIHLPETVE 307
Query: 427 GMRR 430
            +R+
Sbjct: 308 QLRK 311

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           +  S  SE  A+D I  LL K+   RL  +        HP+   ++   A++R  +   +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDTQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
              ++Q
Sbjct: 295 ENFKKQ 300

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 72/282 (25%)
Query: 70  TFGRKTG-LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
           T  +K G L   DF+    +GAG+ G V+  S          H+P  L  M         
Sbjct: 22  TQKQKVGELKDDDFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEI 70
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                ++   E ++L   + P++   Y  F +     I ME   GG L  +  K    R 
Sbjct: 71  KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRI 128
Query: 189 SLTSARFYAAEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXX 247
                   +  V+  L YL     I++RD+KP N+LV S G I L DF +S         
Sbjct: 129 PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------- 179
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                   +    N F G                          
Sbjct: 180 ---------------------GQLIDSMANSFVG-------------------------- 192
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
            T  Y+SPE   G  +    D W+ G+ + EM  GR P   P
Sbjct: 193 -TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 106/286 (37%), Gaps = 83/286 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E K+L+ L HP +  L   F   +   +V +F    DL  +  K      + +  + Y  
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII-KDNSLVLTPSHIKAYML 119
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
             L  LEYLH   I++RDLKP N+L+  +G + L+DF L+                    
Sbjct: 120 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-------------------- 159
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              + FGS       PNR +  + V         T  Y +PE+ 
Sbjct: 160 -------------------KSFGS-------PNRAYXHQVV---------TRWYRAPELL 184
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP----SSM 373
            G   +G  VD WA G  + E++  R PF    ++      + + L  PT+       S+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243
Query: 374 SEY--------------------HARDLISGLLNKDPCNRLGSKRG 399
            +Y                       DLI GL   +PC R+ + + 
Sbjct: 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           + E  +L   D P++   Y  +       I+ME+  GG    L    P      T     
Sbjct: 68  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 124
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             E+L  L+YLH    I+RD+K  NVL+   G + L+DF ++                  
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 166
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    +   T++ R  N F G                           T  +++PE
Sbjct: 167 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 189
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V    ++ +  D W+ GI   E+  G  P +         + +K     P  +P ++   
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 242
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
           +++ L   +   LNK+P  R  +K 
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKE 267

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G I L DF +S                     
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +    N F G                           T  Y+SPE   
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
           G  +    D W+ G+ + EM  GR P   P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G I L DF +S                     
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +    N F G                           T  Y+SPE   
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
           G  +    D W+ G+ + EM  GR P   P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT  +V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +  S+ S   A+D I  LL KDP  R+  +    D   HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 64/236 (27%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 90  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL-- 147
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
                                                 YT +    + +  +  FG  K 
Sbjct: 148 --------------------------------------YTSKRPNAILKLTD--FGFAK- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
           +T + N L   EP          T  YV+PEV     +  + D W+ G+ +Y ++ G  P
Sbjct: 167 ETTSHNSL--TEPCY--------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
Query: 346 F-------AAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
           F        +P  +T +R        FP    S +SE   + LI  LL  +P  R+
Sbjct: 217 FYSNHGLAISPGMKTRIR---MGQYEFPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 268

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           + E  +L   D P++   Y  +       I+ME+  GG    L    P      T     
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 109
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             E+L  L+YLH    I+RD+K  NVL+   G + L+DF ++                  
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 151
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    +   T++ R  N F G                           T  +++PE
Sbjct: 152 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 174
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V    ++ +  D W+ GI   E+  G  P +         + +K     P  +P ++   
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 227
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
           +++ L   +   LNK+P  R  +K 
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKE 252

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           + E  +L   D P++   Y  +       I+ME+  GG    L    P      T     
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 109
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             E+L  L+YLH    I+RD+K  NVL+   G + L+DF ++                  
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 151
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    +   T++ R  N F G                           T  +++PE
Sbjct: 152 --------GQLTDTQIKR--NTFVG---------------------------TPFWMAPE 174
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V    ++ +  D W+ GI   E+  G  P +         + +K     P  +P ++   
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 227
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
           +++ L   +   LNK+P  R  +K 
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKE 252

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 89  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 146
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G I L DF +S                     
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +    N F G                           T  Y+SPE   
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
           G  +    D W+ G+ + EM  GR P   P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V+  S          H+P  L  M              ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           +  L YL     I++RD+KP N+LV S G I L DF +S                     
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +    N F G                           T  Y+SPE   
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
           G  +    D W+ G+ + EM  GR P   P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 66  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 63  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 139 EKKILKMLDHPFL--------PTL-YAEFEASNFSCIVMEFCSGGDLHSLRHK-QPHKRF 188
           E KILK   H  +        PT+ Y EF++      +ME     DLH + H  QP    
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---L 156
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSN 242
           +L   R++  ++L  L+Y+H   +I+RDLKP N+LV  +  + + DF ++  LC++
Sbjct: 157 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 212

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           + E  +L   D P++   Y  +       I+ME+  GG    L    P      T     
Sbjct: 73  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 129
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
             E+L  L+YLH    I+RD+K  NVL+   G + L+DF ++                  
Sbjct: 130 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 171
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    +   T++ R  N F G                           T  +++PE
Sbjct: 172 --------GQLTDTQIKR--NTFVG---------------------------TPFWMAPE 194
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V    ++ +  D W+ GI   E+  G  P +         + +K     P  +P ++   
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 247
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
           +++ L   +   LNK+P  R  +K 
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKE 272

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
           ++   +++  ++YLH  G+++RD+KP N+L+ ++ H+ ++DF LS               
Sbjct: 112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS--------------- 156
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                 RS    R+ +  +   +N                   +P+      +V T  Y 
Sbjct: 157 ------RSFVNIRRVTNNIPLSINE----------NTENFDDDQPILT---DYVATRWYR 197
Query: 314 SPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPS 371
           +PE+  G + +   +D W+ G  + E++ G+  F   S    L  I+   + FP+ +   
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDFPSNEDVE 256
Query: 372 SMSEYHARDLISGLLNK 388
           S+    A+ +I  L  K
Sbjct: 257 SIQSPFAKTMIESLKEK 273

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 64  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I ++L H  +  L+       F  +V +  +GG+L         + +S   A
Sbjct: 48  QKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
                ++L A+ + H +G+++RDLKPEN+L+ S      + L+DF L++
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            F GT  Y+SPEV    ++G  VD WA G+ +Y ++ G  PF         + I      
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
           FP+    +++   A++LI+ +L  +P  R+     A +   HP+
Sbjct: 225 FPSPEWDTVTP-EAKNLINQMLTINPAKRI----TAHEALKHPW 263

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
           +  S  SE  A+D I  LL K+   RL
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRL 265

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 139 EKKILKMLDHPFL--------PTL-YAEFEASNFSCIVMEFCSGGDLHSLRHK-QPHKRF 188
           E KILK   H  +        PT+ Y EF++      +ME     DLH + H  QP    
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---L 155
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSN 242
           +L   R++  ++L  L+Y+H   +I+RDLKP N+LV  +  + + DF ++  LC++
Sbjct: 156 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 61  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 61  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K+++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++LV +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
           E  +L+ L HP +   Y    + +N +  IVME+C GGDL S+  K   +R  L      
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               ++ +AL+  H        +++RDLKP NV +    ++ L DF L            
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL------------ 162
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                  +R LN             +  F  E        FVGT
Sbjct: 163 -----------------------ARILNH------------DEDFAKE--------FVGT 179
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
             Y+SPE  +  S+    D W+ G  +YE+     PF A S +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 18  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 74  MGYSTKPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVK------------------------ 158
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 159 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 192
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
             D +AFGI +YE++ G+ P++  +N   +  +V +
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E   ++  DHP +  L       N   I+ME C+ G+L S    + +    L S   YA 
Sbjct: 58  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 115
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K+++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++LV +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K+++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++LV +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
            + E E +I ++L HP +  L+       F  +V +  +GG+L         + +S   A
Sbjct: 75  QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 132
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
                ++L ++ ++H   I++RDLKPEN+L+ S      + L+DF L++
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
            F GT  Y+SPEV     +G  VD WA G+ +Y ++ G  PF         + I      
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
           FP+    +++   A++LI+ +L  +P  R+ + + 
Sbjct: 252 FPSPEWDTVTP-EAKNLINQMLTINPAKRITADQA 285

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTF 365
           T  +V+PEV     +  A D W+ G+ +Y M+ G TPFA   ++T    L  I     + 
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                +S+S+  A+DL+S +L+ DP  RL     AA V  HP+ 
Sbjct: 243 SGGYWNSVSDT-AKDLVSKMLHVDPHQRL----TAALVLRHPWI 281

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL--TSARFY 196
           E   ++  DHP +  L       N   I+ME C+ G+L S       ++FSL   S   Y
Sbjct: 61  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 116
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
           E   ++  DHP +  L       N   I+ME C+ G+L S       ++FSL  A    Y
Sbjct: 441 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 496
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 30  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 86  MGYSTAPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK------------------------ 170
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 171 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 204
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
             D +AFGI +YE++ G+ P++  +N   +  +V +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 30  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 86  MGYSTKPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK------------------------ 170
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 171 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 204
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
             D +AFGI +YE++ G+ P++  +N   +  +V +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 92/258 (35%), Gaps = 58/258 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E K+  ML HP +  L          C+VMEF  GG L+ +      KR        +A 
Sbjct: 56  EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAV 112
Query: 199 EVLVALEYLH---MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           ++   + YLH   ++ II+RDLK       S   ++L   +    SN I           
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLK-------SSNILILQKVENGDLSNKI----------- 154
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                     +     L+R  +R                          S  G + +++P
Sbjct: 155 ---------LKITDFGLAREWHR----------------------TTKMSAAGAYAWMAP 183
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           EV          D W++G+ ++E++ G  PF           +    L  P   PS+  E
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PSTCPE 241
Query: 376 YHARDLISGLLNKDPCNR 393
             A+ L+    N DP +R
Sbjct: 242 PFAK-LMEDCWNPDPHSR 258

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           LY       +  +VME C   DL+S   K+  K       + Y   +L A+  +H  GI+
Sbjct: 93  LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
           + DLKP N L+  DG + L DF ++                                   
Sbjct: 150 HSDLKPANFLI-VDGMLKLIDFGIA----------------------------------- 173
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
                         + P+   V +       S VGT  Y+ PE    ++S   +G +   
Sbjct: 174 ------------NQMQPDXXXVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
                D W+ G  +Y M YG+TPF    N+ +  + +  P   + FP      + E   +
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 270
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
           D++   L +DP  R+      A     ++THP 
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 107/299 (35%), Gaps = 104/299 (34%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
           SD  + + DF L+                                       R  G+   
Sbjct: 161 SDCTLKILDFGLA---------------------------------------RTAGTS-- 179
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY---- 341
                   F+ EP        V T  Y +PEV  G  +   VD W+ G  + EM+     
Sbjct: 180 --------FMMEPE-------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224
Query: 342 --GR--------------TPFAA--PSNETTLRNIVKK--------------PLTFPTQS 369
             GR              TP  A     + T+RN V+                + FP  S
Sbjct: 225 FPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 370 P-SSMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRSLTPPEIP 426
             + +    ARDL+S +L  D      SKR + D    HP+             PP+IP
Sbjct: 285 EHNKLKASQARDLLSKMLVID-----ASKRISVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 111/305 (36%), Gaps = 94/305 (30%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH----KRFSLTSAR 194
           E  ++K L H  +  LY      N   +V EF    DL      +      +   L   +
Sbjct: 53  EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
           ++  ++L  L + H   I++RDLKP+N+L+   G + L DF L+                
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA---------------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                  R FG        P   F +E V         T  Y +
Sbjct: 156 -----------------------RAFG-------IPVNTFSSEVV---------TLWYRA 176
Query: 315 PEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKKP-------- 362
           P+V  G  ++  ++D W+ G  + EMI G+  F   ++E  L+   +I+  P        
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 363 LTFPTQSPS----------SMSEYHAR--------DLISGLLNKDPCNRLGSKRGAADVK 404
              P  +P+           + + H +        D + GLL  +P  RL +K+      
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH--- 293
Query: 405 THPFF 409
            HP+F
Sbjct: 294 -HPWF 297

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
           G + G+   D  L+R +G G  G VY       Y   +G +      +            
Sbjct: 4   GPQYGIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLD 55
Query: 132 XXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFS 189
              +   E  I+K LDHP +  L    E    + I+ME    G+L H L R+K   K  +
Sbjct: 56  NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           L     Y+ ++  A+ YL  +  ++RD+   N+LV S   + L DF LS
Sbjct: 115 LV---LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
           L  P +  LY       +  I ME   GG L  L  +    P  R     A +Y  + L 
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 175
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
            LEYLH   I++ D+K +NVL+ SDG    L DF  +LC
Sbjct: 176 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 214

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
           E  +L  L+H ++   YA + E  NF              I  E+C    L+ L H +  
Sbjct: 52  EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
            +      R +  ++L AL Y+H  GII+R+LKP N+ +    ++ + DF L+       
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                         RS    +  S  L        GS     LT          A  +  
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSS--DNLTS---------AIGTAX 195
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +V T      EV  G  H N  +D ++ GI  +E IY   PF+         NI+KK  +
Sbjct: 196 YVAT------EVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYHA---RDLISGLLNKDPCNRLGSK 397
              + P    +      + +I  L++ DP  R G++
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGAR 279

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
           L  P +  LY       +  I ME   GG L  L  +    P  R     A +Y  + L 
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 161
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
            LEYLH   I++ D+K +NVL+ SDG    L DF  +LC
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 200

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
           L  P +  LY       +  I ME   GG L  L  +    P  R     A +Y  + L 
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 177
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
            LEYLH   I++ D+K +NVL+ SDG    L DF  +LC
Sbjct: 178 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 216

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 107/313 (34%), Gaps = 80/313 (25%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           R IG G  G VY        R  R  E   +  M               +   E + L+ 
Sbjct: 60  REIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQK 110
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           L HP        +   + + +VME+C  S  DL  + HK+P +   + +    A   L  
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGA---LQG 166
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
           L YLH   +I+RD+K  N+L+   G + L D                             
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGD----------------------------- 197
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV---ASG 320
                           FGS  I  + P   FV            GT  +++PEV      
Sbjct: 198 ----------------FGSASI--MAPANXFV------------GTPYWMAPEVILAMDE 227
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
           G +   VD W+ GI   E+   + P    +  + L +I +     P       SEY  R+
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYF-RN 284
Query: 381 LISGLLNKDPCNR 393
            +   L K P +R
Sbjct: 285 FVDSCLQKIPQDR 297

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K+++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 93/285 (32%), Gaps = 72/285 (25%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           DF+    +GAG+ G V              H P  L  M              ++   E 
Sbjct: 17  DFERISELGAGNGGVVTKVQ----------HRPSGLI-MARKLIHLEIKPAIRNQIIREL 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  +   KR         +  V
Sbjct: 66  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAV 123
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           L  L YL     I++RD+KP N+LV S G I L DF +S                     
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 162
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                       +    N F G                           T  Y++PE   
Sbjct: 163 ---------GQLIDSMANSFVG---------------------------TRSYMAPERLQ 186
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           G  +    D W+ G+ + E+  GR P   P +   L  I  +P+ 
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPP-DAKELEAIFGRPVV 230

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 55/215 (25%)
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++  A+E+LH  G+++RDLKP N+    D  + + DF L    +                
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ--------------- 216
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                   ++   LTP       P  A     VGT  Y+SPE  
Sbjct: 217 ----------------------DEEEQTVLTPM------PAYATHXGQVGTKLYMSPEQI 248
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            G ++ + VD ++ G+ ++E++Y   T        T +RN+ K PL F  + P       
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNL-KFPLLFTQKYPQEHM--- 304
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
              ++  +L+  P  R      A D+  +  F+ L
Sbjct: 305 ---MVQDMLSPSPTER----PEATDIIENAIFENL 332

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 140 KKILKMLDHPFLPTLYAEFEASN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           ++ L  + HP +  ++   E ++        IVME+  G    SL+  +  K   +  A 
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKGQK-LPVAEAI 185
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            Y  E+L AL YLH +G++Y DLKPEN+++
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIML 215

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 107/313 (34%), Gaps = 80/313 (25%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           R IG G  G VY        R  R  E   +  M               +   E + L+ 
Sbjct: 21  REIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQK 71
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           L HP        +   + + +VME+C  S  DL  + HK+P +   + +    A   L  
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGA---LQG 127
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
           L YLH   +I+RD+K  N+L+   G + L D                             
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGD----------------------------- 158
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV---ASG 320
                           FGS  I  + P   FV            GT  +++PEV      
Sbjct: 159 ----------------FGSASI--MAPANXFV------------GTPYWMAPEVILAMDE 188
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
           G +   VD W+ GI   E+   + P    +  + L +I +     P       SEY  R+
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYF-RN 245
Query: 381 LISGLLNKDPCNR 393
            +   L K P +R
Sbjct: 246 FVDSCLQKIPQDR 258

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           +++  R+G G  G V          QD G +      +               R  +E +
Sbjct: 17  WEMKERLGTGGFGYVL-----RWIHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQ 65
Query: 142 ILKMLDHPFL------PTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR 194
           I+K L+HP +      P    +   ++   + ME+C GGDL   L   +          R
Sbjct: 66  IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 125
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
              +++  AL YLH   II+RDLKPEN++++
Sbjct: 126 TLLSDISSALRYLHENRIIHRDLKPENIVLQ 156

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
            FVGT +Y++PE+     +   VD+W+FG   +E I G  PF
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           +++  R+G G  G V          QD G +      +               R  +E +
Sbjct: 16  WEMKERLGTGGFGYVL-----RWIHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQ 64
Query: 142 ILKMLDHPFL------PTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR 194
           I+K L+HP +      P    +   ++   + ME+C GGDL   L   +          R
Sbjct: 65  IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
              +++  AL YLH   II+RDLKPEN++++
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQ 155

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
            FVGT +Y++PE+     +   VD+W+FG   +E I G  PF
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL--TSARFY 196
           E   ++  DHP +  L       N   I+ME C+ G+L S       ++FSL   S   Y
Sbjct: 61  EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 116
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++  AL YL     ++RD+   NVLV +   + L DF LS
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E ++LK L HP L  L   F       +V E+C    LH L   Q      L  +  +  
Sbjct: 52  EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW-- 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           + L A+ + H    I+RD+KPEN+L+     I L DF  +                    
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                      + LT    +  + VA R         Y SPE+ 
Sbjct: 150 ---------------------------RLLTGPSDYYDDEVATRW--------YRSPELL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL---------TFPTQ 368
            G + +G  VD WA G    E++ G  P     ++     +++K L          F T 
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 369 S---------PSSMS---------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                     P  M           Y A  L+ G L+ DP  RL  ++    +  HP+F+
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ----LLHHPYFE 289
Query: 411 GL 412
            +
Sbjct: 290 NI 291

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 62  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 121
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 122 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 172 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 207
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 208 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G+   D  L+R +G G  G VY       Y   +G +      +               +
Sbjct: 20  GIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLDNKEK 71
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFSLTSA 193
              E  I+K LDHP +  L    E    + I+ME    G+L H L R+K   K  +L   
Sbjct: 72  FMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLV-- 128
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             Y+ ++  A+ YL  +  ++RD+   N+LV S   + L DF LS
Sbjct: 129 -LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
           E   ++  DHP +  L       N   I+ME C+ G+L S       ++FSL  A    Y
Sbjct: 441 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 496
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++  AL YL     ++RD+   NVLV +   + L DF LS
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 68  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 127
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 128 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 177
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 178 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 213
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 214 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 268
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 269 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 320

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 63  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 123 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 172
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 173 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 208
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 209 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 264 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 62  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 121
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 122 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 172 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 207
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 208 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 61/181 (33%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
           SD  + + DF L+                                       R  G+   
Sbjct: 161 SDCTLKILDFGLA---------------------------------------RTAGTS-- 179
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
                   F+ EP        V T  Y +PEV  G  +   VD W+ G  + EM+  +  
Sbjct: 180 --------FMMEPE-------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224
Query: 346 F 346
           F
Sbjct: 225 F 225

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 70  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 179
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 180 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 215
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 216 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 271 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 63  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 123 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 172
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 173 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 208
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 209 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 264 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 70  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 179
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 180 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 215
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 216 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+ 
Sbjct: 271 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
           G+   D  L+R +G G  G VY       Y   +G +      +               +
Sbjct: 4   GIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLDNKEK 55
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFSLTSA 193
              E  I+K LDHP +  L    E    + I+ME    G+L H L R+K   K  +L   
Sbjct: 56  FMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLV-- 112
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             Y+ ++  A+ YL  +  ++RD+   N+LV S   + L DF LS
Sbjct: 113 -LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 65/186 (34%), Gaps = 60/186 (32%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VMEFC  G +  L               +   E+L  L +LH   +I+RD+K +NVL+ 
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            +  + L DF +S                                     L+R  G    
Sbjct: 164 ENAEVKLVDFGVSAQ-----------------------------------LDRTVG---- 184
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIYEMI 340
                           R  +F+GT  +++PEV +   + +A      D W+ GI   EM 
Sbjct: 185 ----------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 341 YGRTPF 346
            G  P 
Sbjct: 229 EGAPPL 234

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 121/334 (36%), Gaps = 108/334 (32%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 107 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N+       ++ SD  L +         
Sbjct: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI-------VVKSDCTLKI--------- 205
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                                  L   L R  G+           F+  P       +V 
Sbjct: 206 -----------------------LDFGLARTAGTS----------FMMTP-------YVV 225
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
           T  Y +PEV  G  +   VD W+ G  + EM+  +  F                  P  E
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 353 ------TTLRNIVK-KP----LTFPTQSPSSM----SEYH------ARDLISGLLNKDPC 391
                  T+RN V+ +P    LTFP   P S+    SE++      ARDL+S +L  DP 
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 392 NRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
            R+       D   HP+             PP+I
Sbjct: 346 KRI----SVDDALQHPYINVWYDPAEVEAPPPQI 375

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 121/312 (38%), Gaps = 64/312 (20%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  + +L   F      E      +VME         ++ +  H+R 
Sbjct: 107 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+  +       
Sbjct: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 216
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       S   T    TR  R      G           +   E V   S   + 
Sbjct: 217 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 252
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
             E V  ++   G   + +D W   I   E +    P      + T+RN V+ +P    L
Sbjct: 253 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 307
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
           TFP   P S+    SE++      ARDL+S +L  DP  R+       D   HP+     
Sbjct: 308 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYINVWY 363
Query: 414 FALIRSLTPPEI 425
                   PP+I
Sbjct: 364 DPAEVEAPPPQI 375

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           +   F   N  C+  E  S  +L+ L  K   + FSL   R +A  +L  L+ LH   II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
           + DLKPEN+L++  G   I + DF  S                         + R Y+  
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYTXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
            SRF                                    Y +PEV  G  +G  +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
            G  + E++ G  P     +E      + + L  P+Q     S+  A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASK-RAKNFVS 334

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           +   F   N  C+  E  S  +L+ L  K   + FSL   R +A  +L  L+ LH   II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
           + DLKPEN+L++  G   I + DF  S                         + R Y+  
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYTXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
            SRF                                    Y +PEV  G  +G  +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
            G  + E++ G  P     +E      + + L  P+Q     S+  A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASK-RAKNFVS 334

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLSQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLS 238
           SD  + + DF L+
Sbjct: 161 SDATLKILDFGLA 173

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 71  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 130
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 131 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLS 238
           SD  + + DF L+
Sbjct: 161 SDCTLKILDFGLA 173

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 70  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 74  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 133
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 134 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 14  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H     +F +      A +    ++
Sbjct: 70  MGYSTAPQL----------AIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 19  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 75  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 159
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 160 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 193
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           IVME         ++ +  H+R S     +   ++L  +++LH  GII+RDLKP N++V+
Sbjct: 100 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 154
Query: 226 SDGHIMLSDFDLS 238
           SD  + + DF L+
Sbjct: 155 SDCTLKILDFGLA 167

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 41  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 97  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 145
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 181
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 182 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 215
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 259

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 105/293 (35%), Gaps = 74/293 (25%)
Query: 136 AEMEKKILKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           A+ E ++L+  D HP +   +   +   F  I +E C+     +L+     K F+     
Sbjct: 64  ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLGLE 119
Query: 195 --FYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHI--MLSDFDLSLCSNAIXXX 247
                 +    L +LH L I++RDLKP N+L+    + G I  M+SDF   LC       
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF--GLC------- 170
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                                       +L V     +R     
Sbjct: 171 -------------------------------------------KKLAVGRHSFSRRSGVP 187
Query: 308 GTHEYVSPEVASGGSHGN---AVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           GT  +++PE+ S     N    VD ++ G +F Y +  G  PF          NI+    
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGAC 245
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL 416
           +     P    +  AR+LI  ++  DP  R  +K     V  HPFF  L   L
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKH----VLKHPFFWSLEKQL 294

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 42  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 98  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 182
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 183 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 216
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 19  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 75  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 159
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 160 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 193
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 14  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H     +F +      A +    ++
Sbjct: 70  MGYSTKPQL----------AIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           VGT  +++PEV     +G  VD W  G+ ++ ++ G  PF   + E     I+K      
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            +  S +SE  A+DL+  +L  DP  R+       +   HP+ K  +    +   P  + 
Sbjct: 253 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLKERDRYAYKIHLPETVE 307
Query: 427 GMRR 430
            +R+
Sbjct: 308 QLRK 311

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 16  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 72  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 120
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 156
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 157 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 190
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 234

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
           R   E ++LK L H  +  L   F       +FS + ++    G DL+++   Q     S
Sbjct: 73  RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LS 129
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +F   ++L  L+Y+H  GII+RDLKP NV V  D  + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           VGT  +++PEV     +G  VD W  G+ ++ ++ G  PF   + E     I+K      
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 254
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            +  S +SE  A+DL+  +L  DP  R+       +   HP+ K
Sbjct: 255 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLK 293

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           S VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  +++ L
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           +     P  +        LIS +   DP  R+       ++KTH +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIKTHSWF 278

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E  ++K ++H  +  L   F      E      IVME         ++ +  H+R 
Sbjct: 69  RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           S     +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 200
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 201 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 221
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 76  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 179
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 180 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 200
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 99  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 202
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 203 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 223
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 83/232 (35%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           +   F   N  C+  E  S  +L+ L  K   + FSL   R +A  +L  L+ LH   II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
           + DLKPEN+L++  G   I + DF  S                         + R Y   
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYXXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
            SRF                                    Y +PEV  G  +G  +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
            G  + E++ G  P     +E      + + L  P Q     S+  A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPXQKLLDASK-RAKNFVS 334

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 68  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 171
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 172 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 192
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTF 365
           T  +V+PEV     +  A D W+ G+ +Y  + G TPFA   ++T    L  I     + 
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                +S+S+  A+DL+S  L+ DP  RL     AA V  HP+ 
Sbjct: 243 SGGYWNSVSDT-AKDLVSKXLHVDPHQRL----TAALVLRHPWI 281

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 91  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 194
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 195 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 215
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 245
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 246 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 266
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 204
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 205 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 225
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
           E  +L+ L HP +   Y    + +N +  IVME+C GGDL S+  K   +R  L      
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               ++ +AL+  H        +++RDLKP NV +    ++ L DF              
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG------------- 161
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                 L+R LN           +  + FV  P           
Sbjct: 162 ----------------------LARILN--------HDTSFAKTFVGTPY---------- 181
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
             Y+SPE  +  S+    D W+ G  +YE+     PF A S +
Sbjct: 182 --YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP    + S++ +  
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           S VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  + + L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                 P  +      R LIS +   DP  R+       +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 67  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 170
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 171 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 191
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 82  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 185
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 186 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 206
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 178
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 179 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 199
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 75  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 178
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 179 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 199
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           S VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  + + L
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                 P  +      R LIS +   DP  R+       +++ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 276

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
           E  +L+ L HP +   Y    + +N +  IVME+C GGDL S+  K   +R  L      
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               ++ +AL+  H        +++RDLKP NV +    ++ L DF              
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG------------- 161
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                 L+R LN           +  + FV  P           
Sbjct: 162 ----------------------LARILN--------HDTSFAKAFVGTPY---------- 181
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
             Y+SPE  +  S+    D W+ G  +YE+     PF A S +
Sbjct: 182 --YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 200
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 201 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 221
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 34  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 90  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 138
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 174
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 175 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 208
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 252

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           S VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  + + L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                 P  +      R LIS +   DP  R+       +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 42  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 98  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 182
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 183 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 216
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 64  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 167
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 168 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 188
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
           S VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  + + L
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                 P  +      R LIS +   DP  R+       +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
           E +I++ LDH  +  L   F +S       +  +V+++         RH    K+   + 
Sbjct: 71  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
             + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  +      L LC           
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 174
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FGS K       +L   EP  +  CS      
Sbjct: 175 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 195
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           Y +PE+  G + + +++D W+ G  + E++ G+  F   S    L  I+K
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
           R   E ++LK L H  +  L   F       +FS + ++    G DL+++   Q     S
Sbjct: 73  RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 129
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +F   ++L  L+Y+H  GII+RDLKP NV V  D  + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    + L  L++LH   I++RDLKPEN+LV S G + L+D
Sbjct: 104 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 163
Query: 235 FDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
           F L+                           R YS +++              LTP    
Sbjct: 164 FGLA---------------------------RIYSYQMA--------------LTP---- 178
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
                       V T  Y +PEV    ++   VD W+ G    EM   +  F   S    
Sbjct: 179 -----------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
Query: 355 LRNI 358
           L  I
Sbjct: 228 LGKI 231

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
           +RIG+G  GTVY      K+  D   +   + A                R      IL  
Sbjct: 14  QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           + +   P L           IV ++C G  L+   H    K F +      A +    ++
Sbjct: 70  MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
           YLH   II+RDLK  N+ +  D  + + DF L+                           
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                      +R+ GS + + L+ + L++A  V                 +     +  
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             D +AFGI +YE++ G+ P++  +N   +  +V +    P  S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME C   DL+S   K+  K       + Y   +L A+  +H  GI++ DLKP N L+ 
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG  ML   D  + +                                            
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
             + P+   V +       S VGT  Y+ PE    ++S   +G +        D W+ G 
Sbjct: 204 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +Y M YG+TPF    N+ +  + +  P   + FP      + E   +D++   L +DP 
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
            R+      A     ++THP 
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 94  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 152
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 193
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 194 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 226
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 227 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 307 VGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
           VGT  Y++PEV     + G   D W+ G+ +Y M+ G  PF  P      R  + + L  
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 366 PTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
               P  +      R LIS +   DP  R+       +++ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    + L  L++LH   I++RDLKPEN+LV S G + L+D
Sbjct: 96  DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
           F L+                           R YS +++ F                   
Sbjct: 156 FGLA---------------------------RIYSYQMALF------------------- 169
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
              PV       V T  Y +PEV    ++   VD W+ G    EM   +  F   S    
Sbjct: 170 ---PV-------VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
Query: 355 LRNI 358
           L  I
Sbjct: 220 LGKI 223

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 100/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           LY       +  +VME C   DL+S   K+  K       + Y   +L A+  +H  GI+
Sbjct: 93  LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
           + DLKP N L+  DG  ML   D  + +                                
Sbjct: 150 HSDLKPANFLI-VDG--MLKLIDFGIANQ------------------------------- 175
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
                         + P+   V +       S VGT  Y+ PE    ++S   +G +   
Sbjct: 176 --------------MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
                D W+ G  +Y M YG+TPF    N+ +  + +  P   + FP      + E   +
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 270
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
           D++   L +DP  R+      A     ++THP 
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME C   DL+S   K+  K       + Y   +L A+  +H  GI++ DLKP N L+ 
Sbjct: 86  MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG  ML   D  + +                                            
Sbjct: 142 VDG--MLKLIDFGIANQ------------------------------------------- 156
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
             + P+   V +       S VGT  Y+ PE    ++S   +G +        D W+ G 
Sbjct: 157 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 208
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +Y M YG+TPF    N+ +  + +  P   + FP      + E   +D++   L +DP 
Sbjct: 209 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 263
Query: 392 NRLGSKRGAA----DVKTHPF 408
            R+      A     ++THP 
Sbjct: 264 QRISIPELLAHPYVQIQTHPV 284

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 77/225 (34%), Gaps = 58/225 (25%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           A  E K+LK L H  L  L    +      +V EF     L  L        + +     
Sbjct: 71  AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK-- 128
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
           Y  +++  + + H   II+RD+KPEN+LV   G + L DF  +    A            
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA------------ 176
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                 + Y  + +TR  R                                       +P
Sbjct: 177 ----PGEVYDDEVATRWYR---------------------------------------AP 193
Query: 316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
           E+  G   +G AVD WA G  + EM  G   F   S+   L +I+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME C   DL+S   K+  K       + Y   +L A+  +H  GI++ DLKP N L+ 
Sbjct: 89  MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG  ML   D  + +                                            
Sbjct: 145 VDG--MLKLIDFGIANQ------------------------------------------- 159
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
             + P+   V +       S VGT  Y+ PE    ++S   +G +        D W+ G 
Sbjct: 160 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 211
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +Y M YG+TPF    N+ +  + +  P   + FP      + E   +D++   L +DP 
Sbjct: 212 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 266
Query: 392 NRLGSKRGAA----DVKTHPF 408
            R+      A     ++THP 
Sbjct: 267 QRISIPELLAHPYVQIQTHPV 287

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 84  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 142
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 183
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 184 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 216
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 217 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 55/283 (19%)
Query: 71  FGRKTGLTFRD-FDLHRRIGAGDIGTVYLCSL--NNKYRQDRGHEPCCLYAMXXXXXXXX 127
           F  K G+   + F + R++G G  G V LC    N KY           YA+        
Sbjct: 25  FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKY-----------YAVKVVRNIKK 73
Query: 128 XXXXXXHRAEMEKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
                   A++ KKI     +      Y  +F   +  C++ E   G  L+ +  +  + 
Sbjct: 74  YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN 132
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD--FDLSLCSNAI 244
            F +   + Y  E+L AL YL  + + + DLKPEN+L        L D  F+ SL +   
Sbjct: 133 GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL--------LDDPYFEKSLIT--- 181
Query: 245 XXXXXXXXXXXXXXXRSQTY-TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                          + Q Y T+    +L  F    F S                     
Sbjct: 182 -------VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------------------YH 216
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
            S + T +Y +PEV        + D W+FG  + E+  G   F
Sbjct: 217 GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFE----ASNFS--CIVMEFCSGGDLHSLRHKQPHKRF 188
           RA  E ++LK + H  +  L   F       +F+   +VM F  G DL  L     H++ 
Sbjct: 70  RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL---MKHEKL 125
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                +F   ++L  L Y+H  GII+RDLKP N+ V  D  + + DF L+
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 59/167 (35%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
            Y  ++  A+ ++H LGI +RD+KP+N+LV S       D  L LC              
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------KDNTLKLCD------------- 185
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                    FGS K       +L  +EP  A  CS      Y +
Sbjct: 186 -------------------------FGSAK-------KLIPSEPSVAXICSRF----YRA 209
Query: 315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           PE+  G + +  ++D W+ G    E+I G+  F   S ET++  +V+
Sbjct: 210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSIDQLVR 253

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME C   DL+S   K+  K       + Y   +L A+  +H  GI++ DLKP N L+ 
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG  ML   D  + +                                            
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
             + P+   V +       S VGT  Y+ PE    ++S   +G +        D W+ G 
Sbjct: 204 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +Y M YG+TPF    N+ +  + +  P   + FP      + E   +D++   L +DP 
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
            R+      A     ++THP 
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 167 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 199
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 200 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 100/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
           LY       +  +VME C   DL+S   K+  K       + Y   +L A+  +H  GI+
Sbjct: 73  LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
           + DLKP N L+  DG  ML   D  + +                                
Sbjct: 130 HSDLKPANFLI-VDG--MLKLIDFGIANQ------------------------------- 155
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
                         + P+   V +       S VGT  Y+ PE    ++S   +G +   
Sbjct: 156 --------------MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 195
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
                D W+ G  +Y M YG+TPF    N+ +  + +  P   + FP      + E   +
Sbjct: 196 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 250
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
           D++   L +DP  R+      A     ++THP 
Sbjct: 251 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
           R   E ++LK L H  +  L   F       +FS + ++    G DL+++   Q     S
Sbjct: 65  RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 121
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +F   ++L  L+Y+H  GII+RDLKP NV V  D  + + DF L+
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 112/310 (36%), Gaps = 99/310 (31%)
Query: 139 EKKILKMLDHPFLPTL----------YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           E KIL++L H  +  L          Y   +AS +  +V +FC   DL  L      K F
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKASIY--LVFDFCEH-DLAGLLSNVLVK-F 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
           +L+  +     +L  L Y+H   I++RD+K  NVL+  DG + L+DF L           
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL----------- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                       ++ ++   +++ +R+ NR                            V 
Sbjct: 172 ------------ARAFSLAKNSQPNRYXNR----------------------------VV 191
Query: 309 THEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------ 361
           T  Y  PE+  G   +G  +D W  G  + EM + R+P    + E     ++ +      
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 362 PLTFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRG 399
           P  +P      + E                       +A DLI  LL  DP  R+ S   
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD-- 308
Query: 400 AADVKTHPFF 409
             D   H FF
Sbjct: 309 --DALNHDFF 316

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    + L  L++LH   I++RDLKPEN+LV S G + L+D
Sbjct: 96  DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLS 238
           F L+
Sbjct: 156 FGLA 159

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    + L  L++LH   I++RDLKPEN+LV S G + L+D
Sbjct: 96  DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLS 238
           F L+
Sbjct: 156 FGLA 159

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF L+                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 112/317 (35%), Gaps = 102/317 (32%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           R   E KILK   H  + T++       FE  N   I+ E     DLH +   Q     S
Sbjct: 55  RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               +++  + L A++ LH   +I+RDLKP N+L+ S+  + + DF              
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG------------- 157
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS--CSFV 307
                                 L+R ++                  +EP   +S    FV
Sbjct: 158 ----------------------LARIIDESAADN------------SEPTGQQSGMVEFV 183
Query: 308 GTHEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPS 350
            T  Y +PEV  +   +  A+D W+ G  + E+   R  F                  P 
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 351 NETTLRNI--------VKK-------PL--TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           ++  LR I        +K        PL   FP  +P  +      DL+  +L  DP  R
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGI------DLLQRMLVFDPAKR 297
Query: 394 LGSKRGAADVKTHPFFK 410
           + +K        HP+ +
Sbjct: 298 ITAKEALE----HPYLQ 310

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 139 EKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E ++LK L+H  +  L+A  E   +    ++MEFC  G L+++  ++P   + L  + F 
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFL 115
Query: 197 AA--EVLVALEYLHMLGIIYRDLKPENVL--VRSDGHIM--LSDF 235
               +V+  + +L   GI++R++KP N++  +  DG  +  L+DF
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D      KQ ++  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 139 EKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           E ++LK L+H  +  L+A  E   +    ++MEFC  G L+++  ++P   + L  + F 
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFL 115
Query: 197 AA--EVLVALEYLHMLGIIYRDLKPENVL--VRSDGHIM--LSDF 235
               +V+  + +L   GI++R++KP N++  +  DG  +  L+DF
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E    G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E  +  D   LR     +  +    RFY  E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLR-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF L                     
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    ++L  L++LH   +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
           F L+
Sbjct: 164 FGLA 167

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    ++L  L++LH   +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
           F L+
Sbjct: 164 FGLA 167

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 99/299 (33%), Gaps = 85/299 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L H  + TL+          +V E+        L         ++ + + +  
Sbjct: 50  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYL--DDCGNIINMHNVKLFLF 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  L Y H   +++RDLKP+N+L+   G + L+DF L+   +                
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI--------------- 152
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
             ++TY  +  T   R  +   GS    T                               
Sbjct: 153 -PTKTYDNEVVTLWYRPPDILLGSTDYST------------------------------- 180
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNET---TLRNIV 359
                   +D W  G   YEM  GR  F                  P+ ET    L N  
Sbjct: 181 -------QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233
Query: 360 KKPLTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
            K   +P     ++  +  R      DL++ LL  +  NR+     A D   HPFF  L
Sbjct: 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI----SAEDAMKHPFFLSL 288

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
           DL +   K P       + +    ++L  L++LH   +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
           F L+
Sbjct: 164 FGLA 167

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
           E KIL++L H  +  L      +AS ++ C     +V +FC   DL  L      K F+L
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 124
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
           +  +     +L  L Y+H   I++RD+K  NVL+  DG + L+DF L             
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 171
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                     ++ ++   +++ +R+ NR                            V T 
Sbjct: 172 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 193
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
            Y  PE+  G   +G  +D W  G  + EM + R+P    + E     ++ +      P 
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
            +P      + E                       +A DLI  LL  DP  R+ S     
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 308
Query: 402 DVKTHPFF 409
           D   H FF
Sbjct: 309 DALNHDFF 316

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E    G L S   K    +F++        
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
           E KIL++L H  +  L      +AS ++ C     +V +FC   DL  L      K F+L
Sbjct: 67  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 124
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
           +  +     +L  L Y+H   I++RD+K  NVL+  DG + L+DF L             
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 171
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                     ++ ++   +++ +R+ NR                            V T 
Sbjct: 172 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 193
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
            Y  PE+  G   +G  +D W  G  + EM + R+P    + E     ++ +      P 
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
            +P      + E                       +A DLI  LL  DP  R+ S     
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 308
Query: 402 DVKTHPFF 409
           D   H FF
Sbjct: 309 DALNHDFF 316

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
           E KIL++L H  +  L      +AS ++ C     +V +FC   DL  L      K F+L
Sbjct: 66  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 123
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
           +  +     +L  L Y+H   I++RD+K  NVL+  DG + L+DF L             
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 170
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                     ++ ++   +++ +R+ NR                            V T 
Sbjct: 171 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 192
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
            Y  PE+  G   +G  +D W  G  + EM + R+P    + E     ++ +      P 
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
            +P      + E                       +A DLI  LL  DP  R+ S     
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 307
Query: 402 DVKTHPFF 409
           D   H FF
Sbjct: 308 DALNHDFF 315

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E+   G L +   K    +F++        
Sbjct: 73  EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQFTVIQLVGMLR 131
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 172
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR         G K      P R    E +A R  +             
Sbjct: 173 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAFRKFT------------- 205
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E++ YG  P+   +N+  ++ +
Sbjct: 206 ------SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L         + IV E+   G L +        +F++        
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLR 158
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            V   + YL  LG ++RDL   NVLV S+    +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           R   E KILK   H  + T++       FE  N   I+ E     DLH +   Q     S
Sbjct: 55  RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +++  + L A++ LH   +I+RDLKP N+L+ S+  + + DF L+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 52  EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFG---------------------- 148
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 149 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 176
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L         + IV E+   G L +        +F++        
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLR 158
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            V   + YL  LG ++RDL   NVLV S+    +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           R   E KILK   H  + T++       FE  N   I+ E     DLH +   Q     S
Sbjct: 55  RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
               +++  + L A++ LH   +I+RDLKP N+L+ S+  + + DF L+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    IV E    G L S   K    +F++        
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +G ++RDL   N+L+ S+    +SDF LS                    
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR  +               P R    E +A R  +             
Sbjct: 167 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 199
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ +
Sbjct: 200 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 74/204 (36%), Gaps = 63/204 (30%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ILK+LDH          +  N   +VM F   G +L +L  K  H+   L   +  + ++
Sbjct: 88  ILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 201 LVALEYLHM-LGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           L+ L+Y+H   GII+ D+KPENVL+   D    L    ++   NA               
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY------------ 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
              + YT    TR                                       EY SPEV 
Sbjct: 189 --DEHYTNSIQTR---------------------------------------EYRSPEVL 207
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG 342
            G   G   D W+    I+E+I G
Sbjct: 208 LGAPWGCGADIWSTACLIFELITG 231

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 225 --RSDGHIMLSDFDLS 238
             R +  + L+DF  +
Sbjct: 166 SKRPNAILKLTDFGFA 181

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 96  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 156 SKRPNAILKLTDF 168

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 35/184 (19%)
Query: 70  TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
           T  ++ G+ F++ +L   IG+G  G V+      K+R D                     
Sbjct: 4   TVDKRFGMDFKEIEL---IGSGGFGQVF----KAKHRID------------GKTYVIKRV 44
Query: 130 XXXXHRAEMEKKILKMLDHPFL--------------PTLYAEFEASNFSC--IVMEFCSG 173
                +AE E K L  LDH  +               T       S   C  I MEFC  
Sbjct: 45  KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDK 104
Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
           G L     K+  ++     A     ++   ++Y+H   +I RDLKP N+ +     + + 
Sbjct: 105 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164
Query: 234 DFDL 237
           DF L
Sbjct: 165 DFGL 168

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 74/204 (36%), Gaps = 63/204 (30%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ILK+LDH          +  N   +VM F   G +L +L  K  H+   L   +  + ++
Sbjct: 88  ILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 201 LVALEYLHM-LGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           L+ L+Y+H   GII+ D+KPENVL+   D    L    ++   NA               
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY------------ 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
              + YT    TR                                       EY SPEV 
Sbjct: 189 --DEHYTNSIQTR---------------------------------------EYRSPEVL 207
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG 342
            G   G   D W+    I+E+I G
Sbjct: 208 LGAPWGCGADIWSTACLIFELITG 231

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 98  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 158 SKRPNAILKLTDF 170

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  ILK L H  +  LY          +V E     DL  L         S+T A+ +  
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  + Y H   +++RDLKP+N+L+  +G + ++DF L+                    
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +P+V 
Sbjct: 148 -------------------RAFG-------IPVRKYTHEVV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
            G   +   +D W+ G    EM+ G   F   S    L  I                   
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
                  V +PL  P +S     +    DL+S +L  DP  R+ +K+       H +FK 
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
            N
Sbjct: 287 NN 288

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 87/239 (36%), Gaps = 55/239 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L           IV+EF   G L +   K    +F++        
Sbjct: 94  EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQFTVIQLVGMLR 152
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   + YL  +G ++RDL   N+LV S+    +SDF                       
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFG---------------------- 190
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                        LSR +      + + T T  ++    PV            + +PE  
Sbjct: 191 -------------LSRVIED--DPEAVYTTTGGKI----PV-----------RWTAPEAI 220
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
                 +A D W++GI ++E M YG  P+   SN+  ++ I +   L  P   P+ + +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQ 279

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 196 SKRPNAILKLTDF 208

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 97  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 157 SKRPNAILKLTDF 169

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  + K+ +HP +    A F A N   +V  F + G    L         +  +  +   
Sbjct: 60  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 119
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF--DLSLCSNA 243
            VL AL+Y+H +G ++R +K  ++L+  DG + LS    +LS+ S+ 
Sbjct: 120 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 166

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 91  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 151 SKRPNAILKLTDF 163

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 152 SKRPNAILKLTDF 164

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  + K+ +HP +    A F A N   +V  F + G    L         +  +  +   
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 135
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF--DLSLCSNA 243
            VL AL+Y+H +G ++R +K  ++L+  DG + LS    +LS+ S+ 
Sbjct: 136 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  ILK L H  +  LY          +V E     DL  L         S+T A+ +  
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  + Y H   +++RDLKP+N+L+  +G + ++DF L+                    
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +P+V 
Sbjct: 148 -------------------RAFG-------IPVRKYTHEIV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
            G   +   +D W+ G    EM+ G   F   S    L  I                   
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
                  V +PL  P +S     +    DL+S +L  DP  R+ +K+       H +FK 
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
            N
Sbjct: 287 NN 288

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 90  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 150 SKRPNAILKLTDF 162

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME C   DL+S   K+  K       + Y   +L A+  +H  GI++ DLKP N L+ 
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
            DG  ML   D  + +                                            
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
             + P+   V +       S VG   Y+ PE    ++S   +G +        D W+ G 
Sbjct: 204 --MQPDTTSVVKD------SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +Y M YG+TPF    N+ +  + +  P   + FP      + E   +D++   L +DP 
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
            R+      A     ++THP 
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 202 SKRPNAILKLTDF 214

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 152 SKRPNAILKLTDF 164

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IVME   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 152 SKRPNAILKLTDF 164

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +V T  Y +PE+     H N  VD W+ G  + E++ GRT F    +   L+ I++   T
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 365 FPTQSPSSMSEYHARDLISGL 385
            P    S M  + AR+ I+ L
Sbjct: 271 PPASVISRMPSHEARNYINSL 291

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  ILK L H  +  LY          +V E     DL  L         S+T A+ +  
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           ++L  + Y H   +++RDLKP+N+L+  +G + ++DF L+                    
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R FG        P R +  E V         T  Y +P+V 
Sbjct: 148 -------------------RAFG-------IPVRKYTHEVV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
            G   +   +D W+ G    EM+ G   F   S    L  I                   
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
                  V +PL  P +S     +    DL+S +L  DP  R+ +K+       H +FK 
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
            N
Sbjct: 287 NN 288

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 72  EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 130
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 168
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 169 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 196
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 52  EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 148
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 149 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 176
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 50  EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 108
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 146
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 147 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 174
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 87/239 (36%), Gaps = 53/239 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L      S    I+ EF   G L S   +Q   +F++        
Sbjct: 84  EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLR 142
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +  ++RDL   N+LV S+    +SDF LS                    
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS------------------RF 184
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
               T    Y++ L        G K      P R    E +  R  +             
Sbjct: 185 LEDDTSDPTYTSAL--------GGK-----IPIRWTAPEAIQYRKFT------------- 218
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
                 +A D W++GI ++E M YG  P+   +N+  +  I +   L  P   PS++ +
Sbjct: 219 ------SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQ 271

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 55  EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 113
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 151
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 152 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 179
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           I MEFC  G L     K+  ++     A     ++   ++Y+H   +I+RDLKP N+ + 
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV 170
Query: 226 SDGHIMLSDFDL 237
               + + DF L
Sbjct: 171 DTKQVKIGDFGL 182

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++  L HP L  LY         C+V EF   G L      Q    F+  +      
Sbjct: 53  EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
           +V   + YL    +I+RDL   N LV  +  I +SDF                       
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                            + RF    +  + T  +     PV           ++ SPEV 
Sbjct: 150 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 177
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           S   + +  D W+FG+ ++E+   G+ P+   SN   + +I
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+   G L     +    R   +    Y++++   +EYL     ++RDL   N+LV 
Sbjct: 87  LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 226 SDGHIMLSDFDLS 238
           S+ H+ ++DF L+
Sbjct: 146 SEAHVKIADFGLA 158

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
           +VME+   G L     RH+    R   +    Y++++   +EYL     ++RDL   N+L
Sbjct: 91  LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 224 VRSDGHIMLSDFDLS 238
           V S+ H+ ++DF L+
Sbjct: 148 VESEAHVKIADFGLA 162

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 24  KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 69
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 70  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 128
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 24  KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 69
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 70  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 128
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
           +VME+   G L     RH+    R   +    Y++++   +EYL     ++RDL   N+L
Sbjct: 90  LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 224 VRSDGHIMLSDFDLS 238
           V S+ H+ ++DF L+
Sbjct: 147 VESEAHVKIADFGLA 161

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 67  RSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXX 126
           + A  G    + + D ++  +IGAG  GTV+    +       G +      M       
Sbjct: 24  QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDFHAE 76
Query: 127 XXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
                       E  I+K L HP +              IV E+ S G L+ L HK   +
Sbjct: 77  RVNEFLR-----EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR 131
Query: 187 RFSLTSARFYAA-EVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLS 238
                  R   A +V   + YLH     I++RDLK  N+LV     + + DF LS
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 94/282 (33%), Gaps = 70/282 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 9   KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 55  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
           V  A+EYL     ++RDL   N LV   G + +SDF LS                     
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS------------------RYV 155
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
               YT   S+R S+F                      PV            +  PEV  
Sbjct: 156 LDDEYT---SSRGSKF----------------------PV-----------RWSPPEVLM 179
Query: 320 GGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
                +  D WAFG+ ++E+   G+ P+   +N  T  +I +
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
           +VME+   G L     RH+    R   +    Y++++   +EYL     ++RDL   N+L
Sbjct: 103 LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 224 VRSDGHIMLSDFDLS 238
           V S+ H+ ++DF L+
Sbjct: 160 VESEAHVKIADFGLA 174

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPT 367
           YV+PEV     +  + D W+ G+ +Y ++ G  PF + + +       R I      FP 
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
              S +SE  A+ LI  LL  DP  RL           HP+   +N +++   TP
Sbjct: 236 PEWSEVSE-DAKQLIRLLLKTDPTERL----TITQFMNHPW---INQSMVVPQTP 282

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPT 367
           YV+PEV     +  + D W+ G+ +Y ++ G  PF + + +       R I      FP 
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
              S +SE  A+ LI  LL  DP  RL           HP+   +N +++   TP
Sbjct: 255 PEWSEVSE-DAKQLIRLLLKTDPTERL----TITQFMNHPW---INQSMVVPQTP 301

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +V E+ +  D      KQ ++  +    RFY  E+L AL+Y H  GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP 219
            S    +V E+ +  D      KQ ++  +    RFY  E+L AL+Y H  GI++RD+KP
Sbjct: 111 VSKTPALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKP 165
Query: 220 ENVLV 224
            NV++
Sbjct: 166 HNVMI 170

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
           +FS    ++   ++L  L+Y+H  G+++RDLKP N+ V  D  + + DF L+  ++A
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 15  KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 60
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 61  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 119
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +++K L H  L  LYA         IV E+ S G L      +  K   L      A
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IVME+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 8   KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 53
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 54  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +ILK   HP +  L           IVME   GGD  +    +   R  + +      
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +    +EYL     I+RDL   N LV     + +SDF +S
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +ILK   HP +  L           IVME   GGD  +    +   R  + +      
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +    +EYL     I+RDL   N LV     + +SDF +S
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 9   KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 55  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
           +D    + +G G  G V       KY + RG     +  +                   E
Sbjct: 4   KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 49
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +   +  H RF          +
Sbjct: 50  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 108
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147

>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
           L ++IG+G  G +YL    NK  +D  H     Y                 + +  KK +
Sbjct: 41  LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWI 100
Query: 144 --KMLDHPFLPTLYA----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
             K LD+  +P  Y     EF+  ++  +VME   G DL  +  +  +  F  ++     
Sbjct: 101 ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLG 157
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLS--LCSNA 243
             +L  LEY+H    ++ D+K  N+L+  ++   + L+D+ LS   C N 
Sbjct: 158 IRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNG 207

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+  LD+P++  L    +A     +VME   GG LH     +  +   +++      
Sbjct: 60  EAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK-REEIPVSNVAELLH 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V + ++YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
           ++A++E ++L++++        ++  L   F   N  C+V E  S  +L+ L      + 
Sbjct: 95  NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 153
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNA 243
            SL   R +A ++  AL +L    L II+ DLKPEN+L+ +     I + DF  S     
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----- 208
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                             Q   R Y    SRF                            
Sbjct: 209 -----------------CQLGQRIYQXIQSRF---------------------------- 223
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
                   Y SPEV  G  +  A+D W+ G  + EM  G  P  + +NE    N + + L
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 274
Query: 364 TFP 366
             P
Sbjct: 275 GIP 277

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 53  EAQVMKKLRHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
           ++A++E ++L++++        ++  L   F   N  C+V E  S  +L+ L      + 
Sbjct: 76  NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 134
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNA 243
            SL   R +A ++  AL +L    L II+ DLKPEN+L+ +     I + DF  S     
Sbjct: 135 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----- 189
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                             Q   R Y    SRF                            
Sbjct: 190 -----------------CQLGQRIYQXIQSRF---------------------------- 204
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
                   Y SPEV  G  +  A+D W+ G  + EM  G  P  + +NE    N + + L
Sbjct: 205 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 255
Query: 364 TFP 366
             P
Sbjct: 256 GIP 258

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
           ++A++E ++L++++        ++  L   F   N  C+V E  S  +L+ L      + 
Sbjct: 95  NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 153
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRSDGH--IMLSDFDLSLCSNA 243
            SL   R +A ++  AL +L    L II+ DLKPEN+L+ +     I + DF  S     
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS----- 208
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                             Q   R Y    SRF                            
Sbjct: 209 -----------------CQLGQRIYQXIQSRF---------------------------- 223
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
                   Y SPEV  G  +  A+D W+ G  + EM  G  P  + +NE    N + + L
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 274
Query: 364 TFP 366
             P
Sbjct: 275 GIP 277

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 308 GTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL-RNIVKKPLT 364
           GT+E++ PE  S  S  +G  VD W+ GI +Y M Y   PF+   +   L  NI  K + 
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 365 FP----------TQSPSSMSEYHAR----DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           +P          T   S+ S         D +   L K+P  R+ S+    D   H +  
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE----DALKHEWLA 327
Query: 411 GLNFALIRSLTPPEIPGMRRQ 431
             N   +R  +  E+   R++
Sbjct: 328 DTNIEDLREFS-KELYKKRKK 347

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV+E+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 12  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I++EF + G+L     +   +  S     + A ++
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQD-RGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
           L +++GAG  G V++   NN  +   +  +P  +                      E  +
Sbjct: 16  LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---------------EANL 60
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           +K L H  L  LYA         I+ EF + G L          +  L     ++A++  
Sbjct: 61  MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            + Y+     I+RDL+  NVLV       ++DF L+
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 14  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I++EF + G+L     +   +  S     + A ++
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75  TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
           T    R     R++G G+ G+V +C  +    QD   E   +  +               
Sbjct: 8   TQFEERHLKFLRQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 61
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
             E E +ILK L H  +     +++   +S       ++MEF   G L    + Q HK R
Sbjct: 62  --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEFLPYGSLRE--YLQKHKER 113
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                   Y +++   +EYL     I+RDL   N+LV ++  + + DF L+
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV+E+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
            FS    ++   ++L  L+Y+H  G+++RDLKP N+ V  D  + + DF L+  ++A
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/286 (18%), Positives = 102/286 (35%), Gaps = 65/286 (22%)
Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
           L  RIG+G  GTVY         + + H    +  +              +    E  +L
Sbjct: 40  LSTRIGSGSFGTVY---------KGKWHGDVAVKILKVVDPTPEQFQAFRN----EVAVL 86
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
           +   H  +  L+  +   +   IV ++C G  L+   H Q  K F +      A +    
Sbjct: 87  RKTRHVNI-LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQG 144
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
           ++YLH   II+RD+K  N+ +     + + DF L+                         
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK---------------------- 182
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
                        +R+ GS++++  T + L++A  V                 +      
Sbjct: 183 -------------SRWSGSQQVEQPTGSVLWMAPEVI---------------RMQDNNPF 214
Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
               D +++GI +YE++ G  P++  +N   +  +V +    P  S
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKSQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 166
Query: 233 SDFDL 237
            DF L
Sbjct: 167 LDFGL 171

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 14  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I++EF + G+L     +   +  S     + A ++
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
           IV E   GG+L S    +  + F+   A      +  A++YLH + I +RD+KPEN+L  
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 225 --RSDGHIMLSDF 235
             R +  + L+DF
Sbjct: 196 SKRPNAILKLTDF 208

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
           LP +Y       ++ +V+E    S  DL  L      + F+L +    A ++L  +EY+H
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDL----CDRTFTLKTVLMIAIQLLSRMEYVH 114
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
              +IYRD+KPEN L+   G+     I + DF L+
Sbjct: 115 SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 15/157 (9%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
             L +R+G G  G V++ + N       G+    +  +                   E +
Sbjct: 11  LQLIKRLGNGQFGEVWMGTWN-------GNTKVAIKTLKPGTMSPESFLE-------EAQ 56
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           I+K L H  L  LYA         IV E+ + G L         +   L +    AA+V 
Sbjct: 57  IMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVA 115
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             + Y+  +  I+RDL+  N+LV +     ++DF L+
Sbjct: 116 AGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA 152

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 56  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 154

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQD-RGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
           L +R+GAG  G V++   NN  +   +  +P  +                      E  +
Sbjct: 17  LVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---------------EANL 61
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           +K L H  L  LYA         I+ E+ + G L          +  L     ++A++  
Sbjct: 62  MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            + Y+     I+RDL+  NVLV       ++DF L+
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 12  DITMKHKLGGGQFGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I+ EF + G+L     +   +  S     + A ++
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 29/169 (17%)
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIXX 246
            S    R Y   +  AL+ +H  GI++RD+KP N L  R      L DF L+  ++    
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                        R      + S  LSR                      + VA R+   
Sbjct: 174 ELLKFVQSEAQQERCS--QNKCSICLSR---------------------RQQVAPRA--- 207
Query: 307 VGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
            GT  + +PEV +   +   A+D W+ G+    ++ GR PF   S++ T
Sbjct: 208 -GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 67  RSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXX 126
           + A  G    + + D ++  +IGAG  GTV+    +       G +      M       
Sbjct: 24  QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDFHAE 76
Query: 127 XXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
                       E  I+K L HP +              IV E+ S G L+ L HK   +
Sbjct: 77  RVNEFLR-----EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR 131
Query: 187 RFSLTSARFYAA-EVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLS 238
                  R   A +V   + YLH     I++R+LK  N+LV     + + DF LS
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/278 (19%), Positives = 93/278 (33%), Gaps = 70/278 (25%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
             L  R+GAG  G V++   N       GH    + ++                   E  
Sbjct: 15  LKLVERLGAGQAGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 60
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           ++K L H  L  LYA         I+ E+   G L          + ++      AA++ 
Sbjct: 61  LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRS 261
             + ++     I+RDL+  N+LV       ++DF                          
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG------------------------- 154
Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                     L+R +                   AE  A     F    ++ +PE  + G
Sbjct: 155 ----------LARLIED-----------------AEXTAREGAKF--PIKWTAPEAINYG 185
Query: 322 SHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
           +     D W+FGI + E++ +GR P+   +N   ++N+
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +LV ++Y+H  GI++RDLKP N LV  D  + + DF L+
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +I+  LD+P++  L    +A     +VME   GG LH     +  +   +++      
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK-REEIPVSNVAELLH 443
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V + ++YL     ++R+L   NVL+ +  +  +SDF LS
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168
Query: 233 SDFDLS 238
            DF L+
Sbjct: 169 LDFGLA 174

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI--L 143
           R +G G  G V LC  + +   D   E   + ++              H A+++K+I  L
Sbjct: 27  RDLGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPESGGN-------HIADLKKEIEIL 77
Query: 144 KMLDHPFLPTL--YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           + L H  +         +  N   ++MEF   G L     K  +K  +L     YA ++ 
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQIC 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             ++YL     ++RDL   NVLV S+  + + DF L+
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 119/350 (34%), Gaps = 99/350 (28%)
Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKML 146
           +IG G  GTV+      K +    HE   L  +                A  E  +LK L
Sbjct: 9   KIGEGTYGTVF------KAKNRETHEIVALKRVRLDDDDEGVPSS----ALREICLLKEL 58
Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            H  +  L+    +     +V EFC   DL        +        + +  ++L  L +
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTR 266
            H   +++RDLKP+N+L+  +G + L+DF L+                            
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLA---------------------------- 148
Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGN 325
                      R FG        P R + AE         V T  Y  P+V  G   +  
Sbjct: 149 -----------RAFG-------IPVRCYSAE---------VVTLWYRPPDVLFGAKLYST 181
Query: 326 AVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQ----SPSSMSEYH--- 377
           ++D W+ G    E+     P F     +  L+ I +  L  PT+    S + + +Y    
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRL-LGTPTEEQWPSMTKLPDYKPYP 240
Query: 378 ------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                              RDL+  LL  +P  R+     A +   HP+F
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYF 286

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L 
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A  ++ ALE+LH  L +I+RD+KP NVL+ + G + + DF +S
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172
Query: 233 SDFDLS 238
            DF L+
Sbjct: 173 LDFGLA 178

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L           I+ E+   G L +   K    RF++        
Sbjct: 80  EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 138
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +  ++RDL   N+LV S+    +SDF +S                    
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 179
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR         G K      P R    E +A R  +             
Sbjct: 180 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 212
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ I
Sbjct: 213 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 19  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I+ EF + G+L     +   +  S     + A ++
Sbjct: 66  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 59/268 (22%)
Query: 136 AEMEKKILKMLDHPFLPTLYA----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
           A+ E  + ++ +HP +  L A    E  A + + +++ F   G L +   +   K   LT
Sbjct: 73  AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 192 SAR--FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
             +  +    +   LE +H  G  +RDLKP N+L+  +G  +L D               
Sbjct: 133 EDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL-------------- 178
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                 +++      GS++  TL        +  AA+ C+    
Sbjct: 179 --------------------GSMNQACIHVEGSRQALTL--------QDWAAQRCTI--- 207
Query: 310 HEYVSPEVASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTF 365
             Y +PE+ S  SH       D W+ G  +Y M++G  P+        ++   V+  L+ 
Sbjct: 208 -SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNR 393
           P QSP   S      L++ ++  DP  R
Sbjct: 267 P-QSPRHSSAL--WQLLNSMMTVDPHQR 291

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 47  SPE-NLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKY 105
            PE NLSL   RS  F   A +++ F ++  + F   ++   IG G  G VY    + ++
Sbjct: 1   GPEMNLSLLSARS--FPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVY----HGRW 54
Query: 106 RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC 165
             +       +                 +R    + ++  +     P   A         
Sbjct: 55  HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA--------- 105
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           I+   C G  L+S+  +       +   R  A E++  + YLH  GI+++DLK +NV   
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY- 163
Query: 226 SDGHIMLSDFDLSLCSNAI 244
            +G ++++DF L   S  +
Sbjct: 164 DNGKVVITDFGLFSISGVL 182

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 52  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLK 218
           +  N   ++MEF   G L     K  +K  +L     YA ++   ++YL     ++RDL 
Sbjct: 83  DGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLA 141
Query: 219 PENVLVRSDGHIMLSDFDLS 238
             NVLV S+  + + DF L+
Sbjct: 142 ARNVLVESEHQVKIGDFGLT 161

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 54  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 152

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 12  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I+ EF + G+L     +   +  S     + A ++
Sbjct: 59  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 14  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I+ EF + G+L     +   +  S     + A ++
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           + L R+IG+G  G +YL +               + A                +  +E K
Sbjct: 11  YRLGRKIGSGSFGDIYLGT--------------DIAAGEEVAIKLECVKTKHPQLHIESK 56
Query: 142 ILKMLDHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           I KM+     +PT+       +++ +VME   G  L  L      ++FSL +    A ++
Sbjct: 57  IYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDL-FNFCSRKFSLKTVLLLADQM 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
           +  +EY+H    I+RD+KP+N L+   +    + + DF L+
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L           I+ E+   G L +   K    RF++        
Sbjct: 59  EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +  ++RDL   N+LV S+    +SDF +S                    
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 158
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR         G K      P R    E +A R  +             
Sbjct: 159 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 191
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ I
Sbjct: 192 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 14  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I+ EF + G+L     +   +  S     + A ++
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 15  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 61
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I++EF + G+L     +   +  +     + A ++
Sbjct: 62  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 121 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177
Query: 233 SDFDLS 238
            DF L+
Sbjct: 178 LDFGLA 183

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  I+   DHP +  L           I+ E+   G L +   K    RF++        
Sbjct: 65  EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
            +   ++YL  +  ++RDL   N+LV S+    +SDF +S                    
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 164
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                    Y+TR         G K      P R    E +A R  +             
Sbjct: 165 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 197
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
                 +A D W++GI ++E M YG  P+   SN+  ++ I
Sbjct: 198 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 135 RAEMEKKILKMLDHPF---LPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           R   E ++L    HP    L  ++  FE  A +   +V E     DL  + H Q     S
Sbjct: 75  RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVIS 132
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               +++   +L+ L  LH  G+++RDL P N+L+  +  I + DF+L+    A      
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA------ 186
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                         Y      R    + +F G  K+  +      +AE +  R   F G+
Sbjct: 187 --------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKALFRGS 237
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FPT 367
             Y         +  N +        I +++   +P A      +L N+  +  T   PT
Sbjct: 238 TFY---------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             P ++      DLI+ +L  +P  R+ +++       HP+F+ L
Sbjct: 289 ADPVAL------DLIAKMLEFNPQRRISTEQAL----RHPYFESL 323

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 135 RAEMEKKILKMLDHPF---LPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           R   E ++L    HP    L  ++  FE  A +   +V E     DL  + H Q     S
Sbjct: 75  RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVIS 132
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
               +++   +L+ L  LH  G+++RDL P N+L+  +  I + DF+L+    A      
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA------ 186
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                         Y      R    + +F G  K+  +      +AE +  R   F G+
Sbjct: 187 --------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKALFRGS 237
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FPT 367
             Y         +  N +        I +++   +P A      +L N+  +  T   PT
Sbjct: 238 TFY---------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             P ++      DLI+ +L  +P  R+ +++       HP+F+ L
Sbjct: 289 ADPVAL------DLIAKMLEFNPQRRISTEQAL----RHPYFESL 323

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 233 SDFDLS 238
            DF L+
Sbjct: 172 LDFGLA 177

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 233 SDFDLS 238
            DF L+
Sbjct: 172 LDFGLA 177

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +++ LD+P++  +    EA ++  +VME    G L+  ++ Q ++     +      
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 476
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V + ++YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 516

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +++ LD+P++  +    EA ++  +VME    G L+  ++ Q ++     +      
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 477
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V + ++YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 517

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
           + L R+IG+G  G +YL +               + A                +  +E K
Sbjct: 9   YRLGRKIGSGSFGDIYLGT--------------DIAAGEEVAIKLECVKTKHPQLHIESK 54
Query: 142 ILKMLDHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           I KM+     +PT+       +++ +VME   G  L  L      ++FSL +    A ++
Sbjct: 55  IYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDL-FNFCSRKFSLKTVLLLADQM 112
Query: 201 LVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
           +  +EY+H    I+RD+KP+N L+   +    + + DF L+
Sbjct: 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
           D  +  ++G G  G VY       +++         Y++                   E 
Sbjct: 19  DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++K + HP L  L           I++EF + G+L     +   +  +     + A ++
Sbjct: 66  AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 133 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 233 SDFDLS 238
            DF L+
Sbjct: 190 LDFGLA 195

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
            DF L+
Sbjct: 179 LDFGLA 184

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
            DF L+
Sbjct: 163 LDFGLA 168

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
           +P +Y       ++ +V+E    S  DL  L      + FSL +    A +++  +EY+H
Sbjct: 67  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
              +IYRD+KPEN L+   G+     I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
            DF L+
Sbjct: 174 LDFGLA 179

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 121 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 233 SDFDLS 238
            DF L+
Sbjct: 178 LDFGLA 183

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
            DF L+
Sbjct: 169 LDFGLA 174

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
            DF L+
Sbjct: 174 LDFGLA 179

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
            DF L+
Sbjct: 169 LDFGLA 174

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
            DF L+
Sbjct: 179 LDFGLA 184

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 107 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 233 SDFDLS 238
            DF L+
Sbjct: 164 LDFGLA 169

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
            DF L+
Sbjct: 179 LDFGLA 184

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 233 SDFDLS 238
            DF L+
Sbjct: 172 LDFGLA 177

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           +VME+   G   SLR   P     L     +A ++   + YLH    I+RDL   NVL+ 
Sbjct: 112 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 226 SDGHIMLSDFDLS 238
           +D  + + DF L+
Sbjct: 169 NDRLVKIGDFGLA 181

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 108 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 233 SDFDLS 238
            DF L+
Sbjct: 165 LDFGLA 170

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 109 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165
Query: 233 SDFDLS 238
            DF L+
Sbjct: 166 LDFGLA 171

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 107 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 233 SDFDLS 238
            DF L+
Sbjct: 164 LDFGLA 169

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
            DF L+
Sbjct: 163 LDFGLA 168

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 120 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 233 SDFDLS 238
            DF L+
Sbjct: 177 LDFGLA 182

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
            DF L+
Sbjct: 174 LDFGLA 179

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
            DF L+
Sbjct: 174 LDFGLA 179

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
            DF L+
Sbjct: 163 LDFGLA 168

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
            DF L+
Sbjct: 169 LDFGLA 174

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
            DF L+
Sbjct: 167 LDFGLA 172

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 129 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 233 SDFDLS 238
            DF L+
Sbjct: 186 LDFGLA 191

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 133 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 233 SDFDLS 238
            DF L+
Sbjct: 190 LDFGLA 195

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
            DF L+
Sbjct: 187 LDFGLA 192

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
            DF L+
Sbjct: 187 LDFGLA 192

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 233 SDFDLS 238
            DF L+
Sbjct: 172 LDFGLA 177

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 129 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 233 SDFDLS 238
            DF L+
Sbjct: 186 LDFGLA 191

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
            DF L+
Sbjct: 173 LDFGLA 178

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
            DF L+
Sbjct: 187 LDFGLA 192

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEAS--NFSCIVM--EFCSGGDLHSLRHKQPHKRFS 189
            R + E + LK L HP +   Y  +E++     CIV+  E  + G L     K   KRF 
Sbjct: 70  QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTL-----KTYLKRFK 124
Query: 190 LTSA---RFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNA 243
           +      R +  ++L  L++LH     II+RDLK +N+ +    G + + D  L+    A
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A  ++ ALE+LH  L +I+RD+KP NVL+ + G + + DF +S
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
            DF L+
Sbjct: 173 LDFGLA 178

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K + H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 63  EAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
           G DL+++   Q   + +    +F   ++L  L+Y+H   II+RDLKP N+ V  D  + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
            DF L+
Sbjct: 173 LDFGLA 178

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 120/350 (34%), Gaps = 99/350 (28%)
Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKML 146
           +IG G  GTV+      K +    HE   L  +                A  E  +LK L
Sbjct: 9   KIGEGTYGTVF------KAKNRETHEIVALKRVRLDDDDEGVPSS----ALREICLLKEL 58
Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            H  +  L+    +     +V EFC   DL        +        + +  ++L  L +
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTR 266
            H   +++RDLKP+N+L+  +G + L++F L+                            
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLA---------------------------- 148
Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGN 325
                      R FG        P R + AE         V T  Y  P+V  G   +  
Sbjct: 149 -----------RAFG-------IPVRCYSAE---------VVTLWYRPPDVLFGAKLYST 181
Query: 326 AVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQ----SPSSMSEYH--- 377
           ++D W+ G    E+   GR  F     +  L+ I +  L  PT+    S + + +Y    
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL-LGTPTEEQWPSMTKLPDYKPYP 240
Query: 378 ------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                              RDL+  LL  +P  R+     A +   HP+F
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYF 286

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
           +P +Y       ++ +V+E    S  DL  L      + FSL +    A +++  +EY+H
Sbjct: 67  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
              +IYRD+KPEN L+   G+     I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 110/330 (33%), Gaps = 82/330 (24%)
Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
           RD  L   +G G  G V+L   +N    QD+      L A+               R   
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDK-----MLVAVKALKEASESARQDFQR--- 92
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF--------- 188
           E ++L ML H  +   +          +V E+   GDL+  LR   P  +          
Sbjct: 93  EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 189 ---SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
               L      A++V   + YL  L  ++RDL   N LV     + + DF +S       
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS------- 205
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                                 YST   R   R        T+ P R    E +  R  +
Sbjct: 206 -------------------RDIYSTDYYRVGGR--------TMLPIRWMPPESILYRKFT 238
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
                                 D W+FG+ ++E+  YG+ P+   SN   +  I + + L
Sbjct: 239 -------------------TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
             P   P    E +A  ++ G   ++P  R
Sbjct: 280 ERPRACP---PEVYA--IMRGCWQREPQQR 304

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
           +P +Y       ++ +V+E    S  DL  L      + FSL +    A +++  +EY+H
Sbjct: 88  IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 143
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
              +IYRD+KPEN L+   G+     I + DF L+
Sbjct: 144 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-105
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-98
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-94
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-92
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-92
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-91
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-91
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-91
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-91
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-89
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-89
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-88
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-84
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-76
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-75
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-65
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-65
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-59
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-57
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-54
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-53
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-53
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-52
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-52
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-51
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-51
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-51
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-37
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-51
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-51
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-51
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-50
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-50
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-50
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-50
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-49
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-49
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-49
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-49
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-49
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-49
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-49
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-48
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-48
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-48
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-48
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-48
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-47
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-36
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-47
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-47
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	7e-47
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-47
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-46
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-46
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-46
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-46
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-45
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-45
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-45
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-45
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-44
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-44
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-44
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-44
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-43
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-43
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-43
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-42
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-42
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-42
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-42
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-41
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-40
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-40
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-40
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-40
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-39
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-38
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-37
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-37
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-36
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-36
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-36
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-36
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-34
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-32
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-31
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-30
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-16
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-29
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-15
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-28
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-28
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-28
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-27
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-27
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-26
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-25
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-25
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-25
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-25
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-24
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-24
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-23
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-12
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-23
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-23
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-23
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-23
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-07
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-22
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-22
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-22
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-21
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-21
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-20
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-20
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-20
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-20
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-20
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-19
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-19
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-19
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-19
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-19
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-19
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-19
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-19
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-19
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-19
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-18
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-18
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-17
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-17
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-17
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-17
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-17
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-16
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-16
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-16
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-16
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-16
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-16
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-16
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-16
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-16
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	8e-16
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	9e-16
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-15
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-15
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-15
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-15
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-15
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-15
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-15
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-14
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-14
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-14
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-14
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-14
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-14
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-14
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-14
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-14
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-14
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-14
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-14
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-13
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-13
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-13
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-12
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	7e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-10
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-08
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	7e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	6e-07
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  313 bits (804), Expect = e-105
 Identities = 102/357 (28%), Positives = 150/357 (42%), Gaps = 71/357 (19%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           +       DF   + +G G   TV L     +            YA+K++ K  + K+ K
Sbjct: 23  QPRKKRPEDFKFGKILGEGSFSTVVLA----RELATSRE-----YAIKILEKRHIIKENK 73

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
           V     E+ ++  LDHPF   LY  F+        + +   G+L  L++ +    F  T 
Sbjct: 74  VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETC 131

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
            RFY AE++ ALEYLH  GII+RDLKPEN+L+  D HI ++DF                 
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGT--------------- 176

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                        +K +   +           AR+ SFVGT +Y
Sbjct: 177 -----------------------------AKVLSPESKQ---------ARANSFVGTAQY 198

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           VSPE+ +  S   + D WA G  IY+++ G  PF A +     + I+K    F    P  
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEK 254

Query: 373 MSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALIRSLTPPEIPG 427
                ARDL+  LL  D   RLG     G   +K HPFF+ + +  +   TPP++  
Sbjct: 255 FFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTA 310

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  295 bits (758), Expect = 8e-98
 Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 72/353 (20%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
                F+L + +G G  G V+L       ++  G +   LYAMKV+ K  L+ + +V   
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRVR-T 73

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           +ME+ IL  ++HPF+  L+  F+      ++++F  GGDL           F+    +FY
Sbjct: 74  KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFY 131

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
            AE+ +AL++LH LGIIYRDLKPEN+L+  +GHI L+DF L               S E+
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL---------------SKES 176

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                + Y+                                        F GT EY++PE
Sbjct: 177 IDHEKKAYS----------------------------------------FCGTVEYMAPE 196

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V +   H  + DWW+FG+ ++EM+ G  PF     + T+  I+K  L      P  +S  
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM----PQFLSP- 251

Query: 377 HARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            A+ L+  L  ++P NRLG+   G  ++K H FF  +++  +  R + PP  P
Sbjct: 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  289 bits (742), Expect = 2e-95
 Identities = 108/353 (30%), Positives = 169/353 (47%), Gaps = 77/353 (21%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
            + +DF + R +G G  G V+L    +  R          YAMKV+ KE++ + K+V   
Sbjct: 3   YSLQDFQILRTLGTGSFGRVHLIRSRHNGR---------YYAMKVLKKEIVVRLKQVEHT 53

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E+ +L ++ HPF+  ++  F+ +    ++M++  GG+L S    +  +RF    A+FY
Sbjct: 54  NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS--LLRKSQRFPNPVAKFY 111

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
           AAEV +ALEYLH   IIYRDLKPEN+L+  +GHI ++DF                     
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF------------------- 152

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                    +K +  +T               +  GT +Y++PE
Sbjct: 153 -------------------------AKYVPDVT--------------YTLCGTPDYIAPE 173

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V S   +  ++DWW+FGI IYEM+ G TPF   +   T   I+   L F    P   +E 
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNE- 228

Query: 377 HARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
             +DL+S L+ +D   RLG+ + G  DVK HP+FK + +  +  R++  P  P
Sbjct: 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP 281

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  288 bits (739), Expect = 6e-95
 Identities = 102/354 (28%), Positives = 162/354 (45%), Gaps = 72/354 (20%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHR 135
           +    F+L R +G G  G V+        R+  G     ++AMKV+ K  ++   K    
Sbjct: 14  IRPECFELLRVLGKGGYGKVFQV------RKVTGANTGKIFAMKVLKKAMIVRNAKDTAH 67

Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            + E+ IL+ + HPF+  L   F+      +++E+ SGG+L      +    F   +A F
Sbjct: 68  TKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACF 125

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y AE+ +AL +LH  GIIYRDLKPEN+++   GH+ L+DF L                 E
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL---------------CKE 170

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
           +    + T+T                                        F GT EY++P
Sbjct: 171 SIHDGTVTHT----------------------------------------FCGTIEYMAP 190

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           E+     H  AVDWW+ G  +Y+M+ G  PF   + + T+  I+K  L      P  +++
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL----PPYLTQ 246

Query: 376 YHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
             ARDL+  LL ++  +RLG+    A +V+ HPFF+ +N+  +  R + PP  P
Sbjct: 247 -EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKP 299

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  288 bits (740), Expect = 2e-94
 Identities = 116/387 (29%), Positives = 172/387 (44%), Gaps = 76/387 (19%)

Query: 43  TSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLN 102
           +    PE ++  P      +       +       +  DF   + IG G  G V L    
Sbjct: 3   SQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKPS--DFHFLKVIGKGSFGKVLLA--- 57

Query: 103 NKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KMLDHPFLPTLYAEFEAS 161
            +++ +        YA+KV+ K+ + KKK+      E+ +L K + HPFL  L+  F+ +
Sbjct: 58  -RHKAEE-----VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA 111

Query: 162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
           +    V+++ +GG+L    H Q  + F    ARFYAAE+  AL YLH L I+YRDLKPEN
Sbjct: 112 DKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN 169

Query: 222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG 281
           +L+ S GHI+L+DF L                 E     S T T                
Sbjct: 170 ILLDSQGHIVLTDFGL---------------CKENIEHNSTTST---------------- 198

Query: 282 SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY 341
                                   F GT EY++PEV     +   VDWW  G  +YEM+Y
Sbjct: 199 ------------------------FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY 234

Query: 342 GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA 401
           G  PF + +      NI+ KPL        +++   AR L+ GLL KD   RLG+K    
Sbjct: 235 GLPPFYSRNTAEMYDNILNKPLQL----KPNITN-SARHLLEGLLQKDRTKRLGAKDDFM 289

Query: 402 DVKTHPFFKGLNFALI--RSLTPPEIP 426
           ++K+H FF  +N+  +  + +TPP  P
Sbjct: 290 EIKSHVFFSLINWDDLINKKITPPFNP 316

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  287 bits (736), Expect = 4e-94
 Identities = 110/388 (28%), Positives = 166/388 (42%), Gaps = 78/388 (20%)

Query: 42  PTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSL 101
             +K   E  S+K   +        +  T  + T      FD  + +G G  G V L   
Sbjct: 4   AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQFDRIKTLGTGSFGRVMLVKH 62

Query: 102 NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS 161
                          YAMK+++K+ + K K++     EK+IL+ ++ PFL  L   F+ +
Sbjct: 63  KESGN---------HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113

Query: 162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
           +   +VME+ +GG++ S  H +   RFS   ARFYAA++++  EYLH L +IYRDLKPEN
Sbjct: 114 SNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171

Query: 222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG 281
           +L+   G+I ++DF                                              
Sbjct: 172 LLIDQQGYIQVTDFGF-------------------------------------------- 187

Query: 282 SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY 341
           +K+++  T               +  GT E ++PE+     +  AVDWWA G+ IYEM  
Sbjct: 188 AKRVKGRT--------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233

Query: 342 GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGA 400
           G  PF A         IV   + F    PS  S    +DL+  LL  D   R G+ K G 
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRF----PSHFSS-DLKDLLRNLLQVDLTKRFGNLKNGV 288

Query: 401 ADVKTHPFFKGLNFALI--RSLTPPEIP 426
            D+K H +F   ++  I  R +  P IP
Sbjct: 289 NDIKNHKWFATTDWIAIYQRKVEAPFIP 316

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  282 bits (724), Expect = 2e-92
 Identities = 111/353 (31%), Positives = 161/353 (45%), Gaps = 74/353 (20%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           +T  DFD  + +G G  G V L     + +          YAMK++ KEV+  K +V   
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILV----REKATG-----RYYAMKILRKEVIIAKDEVAHT 52

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
            AE++ ALEYLH   ++YRD+K EN+++  DGHI ++DF L                 E 
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL---------------CKEG 155

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
            S  +   T                                        F GT EY++PE
Sbjct: 156 ISDGATMKT----------------------------------------FCGTPEYLAPE 175

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F    P ++S  
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSP- 230

Query: 377 HARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L PP  P
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  284 bits (729), Expect = 2e-92
 Identities = 99/379 (26%), Positives = 162/379 (42%), Gaps = 75/379 (19%)

Query: 54  KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
           K     +F      +    R   +   D+++ + IG G  G V L     +++  R    
Sbjct: 43  KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV----RHKSTRK--- 95

Query: 114 CCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSG 173
             +YAMK+++K  + K+        E+ I+   + P++  L+  F+   +  +VME+  G
Sbjct: 96  --VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153

Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
           GDL +L             ARFY AEV++AL+ +H +G I+RD+KP+N+L+   GH+ L+
Sbjct: 154 GDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA 210

Query: 234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL 293
           DF   +                                      +      ++  T    
Sbjct: 211 DFGTCM--------------------------------------KMNKEGMVRCDTA--- 229

Query: 294 FVAEPVAARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
                        VGT +Y+SPEV       G +G   DWW+ G+F+YEM+ G TPF A 
Sbjct: 230 -------------VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276

Query: 350 SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
           S   T   I+    +      + +S+  A++LI   L  D   RLG + G  ++K H FF
Sbjct: 277 SLVGTYSKIMNHKNSLTFPDDNDISK-EAKNLICAFL-TDREVRLG-RNGVEEIKRHLFF 333

Query: 410 KGLNFA--LIRSLTPPEIP 426
           K   +A   +R    P +P
Sbjct: 334 KNDQWAWETLRDTVAPVVP 352

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  283 bits (725), Expect = 1e-91
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 77/363 (21%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           ++  L   DF++ + IG G    V +          +  +   +YAMK++NK  + K+ +
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEVAVV---------KMKQTGQVYAMKIMNKWDMLKRGE 104

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
           V     E+ +L   D  ++  L+  F+  N+  +VME+  GGDL +L  K   +R     
Sbjct: 105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEM 163

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           ARFY AE+++A++ +H LG ++RD+KP+N+L+   GHI L+DF   L             
Sbjct: 164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL------------- 210

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                    +      +++L                  VGT +Y
Sbjct: 211 -------------------------KLRADGTVRSLVA----------------VGTPDY 229

Query: 313 VSPEV-------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPL 363
           +SPE+          GS+G   DWWA G+F YEM YG+TPF A S   T   IV  K+ L
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPP 423
           + P      + E  ARD I  LL   P  RLG   GA D +THPFF GL++  +R   PP
Sbjct: 290 SLP-LVDEGVPE-EARDFIQRLLC-PPETRLGR-GGAGDFRTHPFFFGLDWDGLRDSVPP 345

Query: 424 EIP 426
             P
Sbjct: 346 FTP 348

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  289 bits (741), Expect = 6e-91
 Identities = 106/404 (26%), Positives = 167/404 (41%), Gaps = 86/404 (21%)

Query: 42  PTSKSSPENLSLKP---HRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYL 98
           P  +   +NL          SD      +         LT  DF +HR IG G  G VY 
Sbjct: 148 PYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYG 207

Query: 99  CSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL---KMLDHPFLPTLY 155
           C      + D G     +YAMK ++K+ ++ K+    A  E+ +L      D PF+  + 
Sbjct: 208 CR-----KADTGK----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 258

Query: 156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYR 215
             F   +    +++  +GGDLH   H   H  FS    RFYAAE+++ LE++H   ++YR
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316

Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRF 275
           DLKP N+L+   GH+ +SD  L        A +           + + +           
Sbjct: 317 DLKPANILLDEHGHVRISDLGL--------ACD---------FSKKKPHA---------- 349

Query: 276 LNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV-ASGGSHGNAVDWWAFGI 334
                                          VGTH Y++PEV   G ++ ++ DW++ G 
Sbjct: 350 ------------------------------SVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379

Query: 335 FIYEMIYGRTPFAAPSN---ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC 391
            +++++ G +PF            R  +   +      P S S    R L+ GLL +D  
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL----PDSFSP-ELRSLLEGLLQRDVN 434

Query: 392 NRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK 432
            RLG   RGA +VK  PFF+ L++ ++  +   PP IP      
Sbjct: 435 RRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVN 478

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  278 bits (713), Expect = 8e-91
 Identities = 112/369 (30%), Positives = 174/369 (47%), Gaps = 85/369 (23%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
           G    L  +DFDL R IG G    V L     + ++        +YAMKVV KE++   +
Sbjct: 1   GAMDPLGLQDFDLLRVIGRGSYAKVLLV----RLKKTD-----RIYAMKVVKKELVNDDE 51

Query: 132 KVHRAEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
            +   + EK +  +  +HPFL  L++ F+  +    V+E+ +GGDL  + H Q  ++   
Sbjct: 52  DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE 109

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
             ARFY+AE+ +AL YLH  GIIYRDLK +NVL+ S+GHI L+D+ +             
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------- 156

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
               E   P   T T                                        F GT 
Sbjct: 157 --CKEGLRPGDTTST----------------------------------------FCGTP 174

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP---------SNETTLRNIVKK 361
            Y++PE+  G  +G +VDWWA G+ ++EM+ GR+PF            + +   + I++K
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI-- 417
            +      P S+S   A  ++   LNKDP  RLG   + G AD++ HPFF+ +++ ++  
Sbjct: 235 QIRI----PRSLSV-KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 289

Query: 418 RSLTPPEIP 426
           + + PP  P
Sbjct: 290 KQVVPPFKP 298

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  284 bits (729), Expect = 9e-91
 Identities = 106/397 (26%), Positives = 172/397 (43%), Gaps = 82/397 (20%)

Query: 42  PTSKSSPENLSLKP---HRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYL 98
           P  ++   +L   P      S +    ++      +  +    F   R +G G  G V+ 
Sbjct: 145 PLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQP-MGEDWFLDFRVLGRGGFGEVFA 203

Query: 99  CSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF 158
           C +    +         LYA K +NK+ L+K+K    A +EKKIL  +   F+ +L   F
Sbjct: 204 CQMKATGK---------LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254

Query: 159 EASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
           E     C+VM   +GGD+  H     + +  F    A FY A+++  LE+LH   IIYRD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314

Query: 217 LKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFL 276
           LKPENVL+  DG++ +SD  L        AVE         + +++T             
Sbjct: 315 LKPENVLLDDDGNVRISDLGL--------AVELK-------AGQTKTKGY---------- 349

Query: 277 NRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
                                          GT  +++PE+  G  +  +VD++A G+ +
Sbjct: 350 ------------------------------AGTPGFMAPELLLGEEYDFSVDYFALGVTL 379

Query: 337 YEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN 392
           YEMI  R PF A      N+   + ++++ +T+    P   S   ++D    LL KDP  
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVTY----PDKFSP-ASKDFCEALLQKDPEK 434

Query: 393 RLGSK-RGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           RLG +      ++THP F+ +++  +    LTPP +P
Sbjct: 435 RLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  275 bits (706), Expect = 1e-89
 Identities = 103/359 (28%), Positives = 164/359 (45%), Gaps = 75/359 (20%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
           G +  +   DF+    +G G  G V L     + +         LYA+K++ K+V+ +  
Sbjct: 12  GNRDRMKLTDFNFLMVLGKGSFGKVMLS----ERKGTD-----ELYAVKILKKDVVIQDD 62

Query: 132 KVHRAEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
            V    +EK++L      PFL  L++ F+  +    VME+ +GGDL  + H Q   RF  
Sbjct: 63  DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKE 120

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
             A FYAAE+ + L +L   GIIYRDLK +NV++ S+GHI ++DF +             
Sbjct: 121 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM------------- 167

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
               E       T T                                        F GT 
Sbjct: 168 --CKENIWDGVTTKT----------------------------------------FCGTP 185

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
           +Y++PE+ +   +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  + +    P
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY----P 241

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            SMS+  A  +  GL+ K P  RLG    G  D+K H FF+ +++  +  + + PP  P
Sbjct: 242 KSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  276 bits (709), Expect = 2e-89
 Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 86/403 (21%)

Query: 38  SFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVY 97
            +++PT+++     ++      +      R +     + L  +DFDL R IG G    V 
Sbjct: 11  DYDIPTTENLYFQGAMGSGIEEEKEAMNTRESG-KASSSLGLQDFDLLRVIGRGSYAKVL 69

Query: 98  LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KMLDHPFLPTLYA 156
           L     + ++        +YAM+VV KE++   + +   + EK +  +  +HPFL  L++
Sbjct: 70  LV----RLKKTD-----RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120

Query: 157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
            F+  +    V+E+ +GGDL  + H Q  ++     ARFY+AE+ +AL YLH  GIIYRD
Sbjct: 121 CFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 178

Query: 217 LKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFL 276
           LK +NVL+ S+GHI L+D+ +                 E   P   T T           
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGM---------------CKEGLRPGDTTST----------- 212

Query: 277 NRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
                                        F GT  Y++PE+  G  +G +VDWWA G+ +
Sbjct: 213 -----------------------------FCGTPNYIAPEILRGEDYGFSVDWWALGVLM 243

Query: 337 YEMIYGRTPFAAP---------SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           +EM+ GR+PF            + +   + I++K +      P S+S   A  ++   LN
Sbjct: 244 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI----PRSLSV-KAASVLKSFLN 298

Query: 388 KDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           KDP  RLG   + G AD++ HPFF+ +++ ++  + + PP  P
Sbjct: 299 KDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  278 bits (712), Expect = 2e-89
 Identities = 106/361 (29%), Positives = 166/361 (45%), Gaps = 75/361 (20%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           ++  L   DF++ + IG G  G V +          +      ++AMK++NK  + K+ +
Sbjct: 67  KQMRLHREDFEILKVIGRGAFGEVAVV---------KLKNADKVFAMKILNKWEMLKRAE 117

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
                 E+ +L   D  ++ TL+  F+  N   +VM++  GGDL +L  K    R     
Sbjct: 118 TACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEM 176

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           ARFY AE+++A++ +H L  ++RD+KP+N+L+  +GHI L+D                  
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD------------------ 218

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                      FGS            + E    +S   VGT +Y
Sbjct: 219 ---------------------------FGSCLK---------LMEDGTVQSSVAVGTPDY 242

Query: 313 VSPEV-----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTF 365
           +SPE+        G +G   DWW+ G+ +YEM+YG TPF A S   T   I+  K+   F
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
           P    + +SE +A+DLI  L+     +RLG   G  D K HPFF G+++  IR+   P I
Sbjct: 303 P-TQVTDVSE-NAKDLIRRLICSRE-HRLGQ-NGIEDFKKHPFFSGIDWDNIRNCEAPYI 358

Query: 426 P 426
           P
Sbjct: 359 P 359

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  274 bits (704), Expect = 2e-89
 Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 77/357 (21%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
            +  L   DF LH+ +G G  G V+L     ++++         +A+K + K+V+     
Sbjct: 10  LQIKLKIEDFILHKMLGKGSFGKVFLA----EFKKTN-----QFFAIKALKKDVVLMDDD 60

Query: 133 VHRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
           V    +EK++L +  +HPFL  ++  F+       VME+ +GGDL    H Q   +F L+
Sbjct: 61  VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY--HIQSCHKFDLS 118

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
            A FYAAE+++ L++LH  GI+YRDLK +N+L+  DGHI ++DF +              
Sbjct: 119 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-------------- 164

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
              E     ++T T                                        F GT +
Sbjct: 165 -CKENMLGDAKTNT----------------------------------------FCGTPD 183

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           Y++PE+  G  + ++VDWW+FG+ +YEM+ G++PF     E    +I      +    P 
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PR 239

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            + +  A+DL+  L  ++P  RLG      D++ HP F+ +N+  +  + + PP  P
Sbjct: 240 WLEK-EAKDLLVKLFVREPEKRLGV---RGDIRQHPLFREINWEELERKEIDPPFRP 292

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  275 bits (706), Expect = 3e-89
 Identities = 87/365 (23%), Positives = 154/365 (42%), Gaps = 85/365 (23%)

Query: 71  FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK 130
           F     + F  F++ R IG G  G V +   N+  +         +YAMK +NK+   ++
Sbjct: 6   FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKK---------MYAMKYMNKQKCVER 56

Query: 131 KKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
            +V     E +I++ L+HPFL  L+  F+      +V++   GGDL    H Q +  F  
Sbjct: 57  NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKE 114

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
            + + +  E+++AL+YL    II+RD+KP+N+L+   GH+ ++D                
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITD---------------- 158

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                        F  +  +   T            +  +  GT
Sbjct: 159 -----------------------------FNIAAMLPRET------------QITTMAGT 177

Query: 310 HEYVSPEV---ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---LRNIVKKPL 363
             Y++PE+     G  +  AVDWW+ G+  YE++ GR P+   S+ ++   +       +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV 237

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLT 421
           T+    PS+ S+     L+  LL  +P  R       +DV+  P+   +N+  +  + L 
Sbjct: 238 TY----PSAWSQ-EMVSLLKKLLEPNPDQRFS---QLSDVQNFPYMNDINWDAVFQKRLI 289

Query: 422 PPEIP 426
           P  IP
Sbjct: 290 PGFIP 294

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  276 bits (708), Expect = 7e-89
 Identities = 115/414 (27%), Positives = 176/414 (42%), Gaps = 78/414 (18%)

Query: 18  TSTANSSSMSSESCSSFSRLSFELPTSKSSPENL-SLKPHRSSDFAYSAIRSATFGRKTG 76
           T    +     E  ++   ++  L    ++  +  S  P  +S      +  A    +  
Sbjct: 87  TFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVT 146

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           +   +F+  + +G G  G V L       R          YAMK++ KEV+  K +V   
Sbjct: 147 MN--EFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHT 195

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L    H    + FS   ARFY
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY 253

Query: 197 AAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
            AE++ AL+YLH    ++YRDLK EN+++  DGHI ++DF L                 E
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL---------------CKE 298

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                +   T                                        F GT EY++P
Sbjct: 299 GIKDGATMKT----------------------------------------FCGTPEYLAP 318

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           EV     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + F    P ++  
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF----PRTLGP 374

Query: 376 YHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
             A+ L+SGLL KDP  RLG     A ++  H FF G+ +  +  + L+PP  P
Sbjct: 375 -EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP 427

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  271 bits (695), Expect = 6e-88
 Identities = 113/360 (31%), Positives = 163/360 (45%), Gaps = 76/360 (21%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
                L   +F+  R +G G  G V L          R  E   LYA+KV+ K+V+ +  
Sbjct: 15  NSSNRLGIDNFEFIRVLGKGSFGKVMLA---------RVKETGDLYAVKVLKKDVILQDD 65

Query: 132 KVHRAEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
            V     EK+IL    +HPFL  L+  F+  +    VMEF +GGDL  + H Q  +RF  
Sbjct: 66  DVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDE 123

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
             ARFYAAE++ AL +LH  GIIYRDLK +NVL+  +GH  L+DF +             
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM------------- 170

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
               E       T T             F G       TP                    
Sbjct: 171 --CKEGICNGVTTAT-------------FCG-------TP-------------------- 188

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
           +Y++PE+     +G AVDWWA G+ +YEM+ G  PF A + +     I+   + +    P
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY----P 244

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           + + E  A  ++   + K+P  RLGS  + G   +  HPFFK +++A +  R + PP  P
Sbjct: 245 TWLHE-DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRP 303

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  271 bits (695), Expect = 2e-84
 Identities = 109/423 (25%), Positives = 176/423 (41%), Gaps = 75/423 (17%)

Query: 8   EPPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIR 67
           +   D   +  S       +       S  + EL       +            A +  +
Sbjct: 269 KAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISK 328

Query: 68  SATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL 127
               G +  +   DF+    +G G  G V L                 LYA+K++ K+V+
Sbjct: 329 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDE---------LYAVKILKKDVV 379

Query: 128 EKKKKVHRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
            +   V    +EK++L +    PFL  L++ F+  +    VME+ +GGDL  + H Q   
Sbjct: 380 IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVG 437

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
           RF    A FYAAE+ + L +L   GIIYRDLK +NV++ S+GHI ++DF +         
Sbjct: 438 RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM--------- 488

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                   E       T T                                        F
Sbjct: 489 ------CKENIWDGVTTKT----------------------------------------F 502

Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT +Y++PE+ +   +G +VDWWAFG+ +YEM+ G+ PF     +   ++I++  + + 
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY- 561

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPP 423
              P SMS+  A  +  GL+ K P  RLG    G  D+K H FF+ +++  +  + + PP
Sbjct: 562 ---PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 617

Query: 424 EIP 426
             P
Sbjct: 618 YKP 620

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  239 bits (613), Expect = 1e-76
 Identities = 99/359 (27%), Positives = 145/359 (40%), Gaps = 83/359 (23%)

Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           K   T  DFD+ R +G G  G VYL     NK+          + A+KV+ K  LEK+  
Sbjct: 8   KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 57

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            H+   E +I   L HP +  +Y  F       +++EF   G+L+     Q H RF    
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK--ELQKHGRFDEQR 115

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           +  +  E+  AL Y H   +I+RD+KPEN+L+   G + ++DF  S              
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------------- 161

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                +P  +  T                                      C   GT +Y
Sbjct: 162 ---VHAPSLRRRT-------------------------------------MC---GTLDY 178

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           + PE+  G +H   VD W  G+  YE + G  PF +PS+  T R IV   L F    P  
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF----PPF 234

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
           +S+  ++DLIS LL   P  RL        V  HP+ K  +    R + PP     + +
Sbjct: 235 LSD-GSKDLISKLLRYHPPQRL----PLKGVMEHPWVKANS----RRVLPPVYQSTQSK 284

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  235 bits (601), Expect = 5e-75
 Identities = 89/339 (26%), Positives = 136/339 (40%), Gaps = 79/339 (23%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
           +K      DF++ R +G G  G VYL     +K+          + A+KV+ K  LEK  
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF----------ILALKVLFKAQLEKAG 51

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
             H+   E +I   L HP +  LY  F  +    +++E+   G ++     Q   +F   
Sbjct: 52  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR--ELQKLSKFDEQ 109

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
               Y  E+  AL Y H   +I+RD+KPEN+L+ S G + ++DF  S             
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------- 156

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                 +P S+                                         C   GT +
Sbjct: 157 ----VHAPSSRRTD-------------------------------------LC---GTLD 172

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           Y+ PE+  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TF    P 
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PD 228

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            ++E  ARDLIS LL  +P  R        +V  HP+  
Sbjct: 229 FVTE-GARDLISRLLKHNPSQRP----MLREVLEHPWIT 262

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  211 bits (540), Expect = 5e-65
 Identities = 73/386 (18%), Positives = 124/386 (32%), Gaps = 110/386 (28%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           ++      D+ + R +  G    + LC  +NK+           YA+K   K +LEKK+ 
Sbjct: 24  KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKF-----------YALKKYEKSLLEKKRD 72

Query: 133 V--------------HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-- 176
                             + E +I+  + + +  T        +   I+ E+     +  
Sbjct: 73  FTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK 132

Query: 177 ----HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIM 231
                 +  K       +   +     VL +  Y+H    I +RD+KP N+L+  +G + 
Sbjct: 133 FDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVK 192

Query: 232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPN 291
           LSDF  S                                        +   KKI+     
Sbjct: 193 LSDFGES---------------------------------------EYMVDKKIKG---- 209

Query: 292 RLFVAEPVAARSCSFVGTHEYVSPEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
                      S    GT+E++ PE  S     +G  VD W+ GI +Y M Y   PF+  
Sbjct: 210 -----------SR---GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255

Query: 350 SN-ETTLRNIVKKPLTFPTQSPSSMSEYH--------------ARDLISGLLNKDPCNRL 394
            +      NI  K + +P      +                    D +   L K+P  R+
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315

Query: 395 GSKRGAADVKTHPFFKGLNFALIRSL 420
            S+    D   H +    N   +R  
Sbjct: 316 TSE----DALKHEWLADTNIEDLREF 337

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  210 bits (536), Expect = 5e-65
 Identities = 71/344 (20%), Positives = 118/344 (34%), Gaps = 76/344 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+    +G G  G V       +   D        YA+K +       ++K+     E 
Sbjct: 7   DFEEIAVLGQGAFGQVVKA----RNALDS-----RYYAIKKIRH----TEEKLSTILSEV 53

Query: 141 KILKMLDHPFLPTLYAEFEASNFS-------------CIVMEFCSGGDLHSLRHKQPHKR 187
            +L  L+H ++   YA +                    I ME+C  G L+ L H +    
Sbjct: 54  MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN- 112

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV 247
                      ++L AL Y+H  GII+RDLKP N+ +    ++ + DF L+   +    +
Sbjct: 113 QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
               S     S  + T                                         S +
Sbjct: 173 LKLDSQNLPGSSDNLT-----------------------------------------SAI 191

Query: 308 GTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
           GT  YV+ EV  G G +   +D ++ GI  +EMIY             L+ +    + FP
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFP 249

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                +  +   + +I  L++ DP  R     GA  +    +  
Sbjct: 250 PDFDDNKMK-VEKKIIRLLIDHDPNKRP----GARTLLNSGWLP 288

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  195 bits (498), Expect = 3e-59
 Identities = 68/390 (17%), Positives = 122/390 (31%), Gaps = 88/390 (22%)

Query: 22  NSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRD 81
           +SS +   + + + +   +L   + S    + +  +S  +  S        R      + 
Sbjct: 7   HSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPS--------RPESFFQQS 58

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F    R+G G  G V+      + ++D       LYA+K         K +  +      
Sbjct: 59  FQRLSRLGHGSYGEVFKV----RSKEDG-----RLYAVKRSMSPFRGPKDRARKLAEVGS 109

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
             K+  HP    L   +E      +  E C G  L                   Y  + L
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTL 167

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
           +AL +LH  G+++ D+KP N+ +   G   L D                           
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD--------------------------- 200

Query: 262 QTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                             FG   ++ T            A       G   Y++PE+  G
Sbjct: 201 ------------------FGLLVELGT------------AGAGEVQEGDPRYMAPELLQG 230

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             +G A D ++ G+ I E+         P      + + +  L  P +  + +S    R 
Sbjct: 231 S-YGTAADVFSLGLTILEVACNMEL---PHGGEGWQQLRQGYL--PPEFTAGLSS-ELRS 283

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           ++  +L  DP  R      A  +   P  +
Sbjct: 284 VLVMMLEPDPKLRA----TAEALLALPVLR 309

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  188 bits (481), Expect = 4e-57
 Identities = 89/340 (26%), Positives = 140/340 (41%), Gaps = 80/340 (23%)

Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
             G    DF +   +G G    VY   S++               A+K+++K+ + K   
Sbjct: 5   CIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLE----------VAIKMIDKKAMYKAGM 54

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
           V R + E KI   L HP +  LY  FE SN+  +V+E C  G+++     +  K FS   
Sbjct: 55  VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENE 113

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           AR +  +++  + YLH  GI++RDL   N+L+  + +I ++DF L+              
Sbjct: 114 ARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA-------------- 159

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTL--TPNRLFVAEPVAARSCSFVGTH 310
                     T  +    +               TL  TPN                   
Sbjct: 160 ----------TQLKMPHEKH-------------YTLCGTPN------------------- 177

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
            Y+SPE+A+  +HG   D W+ G   Y ++ GR PF   + + TL  +V          P
Sbjct: 178 -YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM----P 232

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           S +S   A+DLI  LL ++P +RL      + V  HPF  
Sbjct: 233 SFLSI-EAKDLIHQLLRRNPADRL----SLSSVLDHPFMS 267

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  183 bits (467), Expect = 3e-54
 Identities = 70/370 (18%), Positives = 127/370 (34%), Gaps = 76/370 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +   ++IG G  G   L         + G      Y +K +N   +  K++   +  E 
Sbjct: 25  KYVRLQKIGEGSFGKAILV-----KSTEDGR----QYVIKEINISRMSSKER-EESRREV 74

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L  + HP +      FE +    IVM++C GGDL    + Q    F       +  ++
Sbjct: 75  AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
            +AL+++H   I++RD+K +N+ +  DG + L D                          
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGD-------------------------- 168

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG  ++  L              + + +GT  Y+SPE+   
Sbjct: 169 -------------------FGIARV--LNSTVEL--------ARACIGTPYYLSPEICEN 199

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             + N  D WA G  +YE+   +  F A S +  +  I+              S    R 
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS---FPPVSLHYSY-DLRS 255

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE---IPGMRRQKTMPFP 437
           L+S L  ++P +R         +    F        +      E   +    +  + P P
Sbjct: 256 LVSQLFKRNPRDRP----SVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIP 311

Query: 438 DQKIKSQSTA 447
            ++  S   +
Sbjct: 312 AKRPASGQNS 321

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  180 bits (458), Expect = 2e-53
 Identities = 78/352 (22%), Positives = 126/352 (35%), Gaps = 88/352 (25%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           + R +   R +G G     +     + K            +A K+V K +L K  +  + 
Sbjct: 13  SRRRYVRGRFLGKGGFAKCFEISDADTKEV----------FAGKIVPKSLLLKPHQREKM 62

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
            ME  I + L H  +   +  FE ++F  +V+E C    L  L HK+  K  +   AR+Y
Sbjct: 63  SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEARYY 120

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             ++++  +YLH   +I+RDLK  N+ +  D  + + DF L+                  
Sbjct: 121 LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA------------------ 162

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTL--TPNRLFVAEPVAARSCSFVGTHEYVS 314
                 T       R              + L  TPN                    Y++
Sbjct: 163 ------TKVEYDGERK-------------KVLCGTPN--------------------YIA 183

Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
           PEV S   H   VD W+ G  +Y ++ G+ PF     + T   I K   +     P  ++
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHIN 239

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
              A  LI  +L  DP  R        ++    FF            P  +P
Sbjct: 240 P-VAASLIQKMLQTDPTARP----TINELLNDEFFT-------SGYIPARLP 279

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  180 bits (458), Expect = 3e-53
 Identities = 75/369 (20%), Positives = 123/369 (33%), Gaps = 89/369 (24%)

Query: 56  HRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCC 115
           H              + +   +  R + + ++IG+G    V+             +E   
Sbjct: 4   HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVL----------NEKKQ 53

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP--TLYAEFEASNFSCIVMEFCSG 173
           +YA+K VN E     + +     E   L  L         LY       +  +VME C  
Sbjct: 54  IYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111

Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
            DL+S   K   K       + Y   +L A+  +H  GI++ DLKP N L+  DG + L 
Sbjct: 112 IDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLI 168

Query: 234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL 293
           DF +                                            + ++Q  T + +
Sbjct: 169 DFGI--------------------------------------------ANQMQPDTTSVV 184

Query: 294 FVAEPVAARSCSFVGTHEYVSPEV-----------ASGGSHGNAVDWWAFGIFIYEMIYG 342
                      S VGT  Y+ PE             S        D W+ G  +Y M YG
Sbjct: 185 KD---------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235

Query: 343 RTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA 401
           +TPF    N+ + L  I+          P    +   +D++   L +DP  R+       
Sbjct: 236 KTPFQQIINQISKLHAIIDPNHEIE--FPDIPEK-DLQDVLKCCLKRDPKQRI----SIP 288

Query: 402 DVKTHPFFK 410
           ++  HP+ +
Sbjct: 289 ELLAHPYVQ 297

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  179 bits (455), Expect = 1e-52
 Identities = 79/372 (21%), Positives = 130/372 (34%), Gaps = 82/372 (22%)

Query: 42  PTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLC-S 100
           P          +    +   A  A            + R +   R +G G     +    
Sbjct: 4   PADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPR-SRRRYVRGRFLGKGGFAKCFEISD 62

Query: 101 LNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA 160
            + K            +A K+V K +L K  +  +  ME  I + L H  +   +  FE 
Sbjct: 63  ADTKEV----------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 112

Query: 161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE 220
           ++F  +V+E C    L  L HK+  K  +   AR+Y  ++++  +YLH   +I+RDLK  
Sbjct: 113 NDFVFVVLELCRRRSLLEL-HKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLG 170

Query: 221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFF 280
           N+ +  D  + + DF L+        VE                                
Sbjct: 171 NLFLNEDLEVKIGDFGLA------TKVEYD------------------------------ 194

Query: 281 GSKKIQTL--TPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYE 338
             ++ + L  TPN                    Y++PEV S   H   VD W+ G  +Y 
Sbjct: 195 -GERKKVLCGTPN--------------------YIAPEVLSKKGHSFEVDVWSIGCIMYT 233

Query: 339 MIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR 398
           ++ G+ PF     + T   I K   +     P  ++   A  LI  +L  DP  R     
Sbjct: 234 LLVGKPPFETSCLKETYLRIKKNEYSI----PKHINP-VAASLIQKMLQTDPTARP---- 284

Query: 399 GAADVKTHPFFK 410
              ++    FF 
Sbjct: 285 TINELLNDEFFT 296

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  178 bits (453), Expect = 3e-52
 Identities = 74/345 (21%), Positives = 119/345 (34%), Gaps = 89/345 (25%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R + + ++IG+G    V+             +E   +YA+K VN E     + +     E
Sbjct: 9   RIYSILKQIGSGGSSKVFQVL----------NEKKQIYAIKYVNLEEA-DNQTLDSYRNE 57

Query: 140 KKILKMLDHPFLP--TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
              L  L         LY       +  +VME C   DL+S   K   K       + Y 
Sbjct: 58  IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK--KKSIDPWERKSYW 114

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
             +L A+  +H  GI++ DLKP N L+  DG + L DF +                    
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGI-------------------- 153

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                   + ++Q  T + +           S VGT  Y+ PE 
Sbjct: 154 ------------------------ANQMQPDTTSVVKD---------SQVGTVNYMPPEA 180

Query: 318 -----------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTF 365
                       S        D W+ G  +Y M YG+TPF    N+ + L  I+      
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 240

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
               P    +   +D++   L +DP  R+       ++  HP+ +
Sbjct: 241 E--FPDIPEK-DLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 278

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  174 bits (444), Expect = 2e-51
 Identities = 68/347 (19%), Positives = 123/347 (35%), Gaps = 77/347 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+  + +G G  G V+      K + D      C YA+K +     E  ++  +   E 
Sbjct: 6   DFEPIQCLGRGGFGVVFEA----KNKVDD-----CNYAIKRIRLPNRELARE--KVMREV 54

Query: 141 KILKMLDHPFLPTLYAEFE------------ASNFSCIVMEFCSGGDLHS-LRHKQPHKR 187
           K L  L+HP +   +  +                +  I M+ C   +L   +  +   + 
Sbjct: 55  KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV 247
              +       ++  A+E+LH  G+++RDLKP N+    D  + + DF            
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG----------- 163

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                   L   ++        Q      +    P  AR    V
Sbjct: 164 ------------------------LVTAMD--------QDEEEQTVLTPMPAYARHTGQV 191

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT  Y+SPE   G S+ + VD ++ G+ ++E++Y   PF+           V+    FP 
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNL-KFPP 247

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
                        ++  +L+  P  R      A ++  +  F+ L+F
Sbjct: 248 LFTQKYPC--EYVMVQDMLSPSPMERP----EAINIIENAVFEDLDF 288

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  174 bits (443), Expect = 2e-51
 Identities = 89/344 (25%), Positives = 134/344 (38%), Gaps = 81/344 (23%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
           G   G   + + L   IG G  G V +                   A K + K  +E   
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIA---------VQKGTRIRRAAKKIPKYFVEDVD 51

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSL 190
           +  +   E +I+K LDHP +  LY  FE +    +VME C+GG+L   + HK   + F  
Sbjct: 52  RFKQ---EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRE 105

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAV 247
           + A     +VL A+ Y H L + +RDLKPEN L  +   D  + L DF L+         
Sbjct: 106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA--------- 156

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                           F   K+                   + V
Sbjct: 157 ------------------------------ARFKPGKMMR-----------------TKV 169

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT  YVSP+V   G +G   D W+ G+ +Y ++ G  PF+AP++   +  I +   TFP 
Sbjct: 170 GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPE 228

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           +   ++S   A  LI  LL K P  R+     +     H +F+ 
Sbjct: 229 KDWLNVSP-QAESLIRRLLTKSPKQRI----TSLQALEHEWFEK 267

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  175 bits (447), Expect = 3e-51
 Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 18/221 (8%)

Query: 20  TANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTF 79
             +      E  SS               + L++K    +              K G+  
Sbjct: 2   AHHHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGH------AEKVGIE- 54

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEM 138
            +F+L + +G G  G V+L       R+  GH+   LYAMKV+ K  +++K K       
Sbjct: 55  -NFELLKVLGTGAYGKVFLV------RKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT 107

Query: 139 EKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E+++L+ +   PFL TL+  F+      +++++ +GG+L +  H    +RF+    + Y 
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT--HLSQRERFTEHEVQIYV 165

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            E+++ALE+LH LGIIYRD+K EN+L+ S+GH++L+DF LS
Sbjct: 166 GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  137 bits (346), Expect = 9e-37
 Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 14/134 (10%)

Query: 302 RSCSFVGTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL---- 355
           R+  F GT EY++P++  GG   H  AVDWW+ G+ +YE++ G +PF     + +     
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275

Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
           R I+K    +    P  MS   A+DLI  LL KDP  RLG   R A ++K H FF+ +N+
Sbjct: 276 RRILKSEPPY----PQEMSA-LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330

Query: 415 ALI--RSLTPPEIP 426
             +  + +  P  P
Sbjct: 331 DDLAAKKVPAPFKP 344

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  173 bits (441), Expect = 3e-51
 Identities = 66/340 (19%), Positives = 114/340 (33%), Gaps = 82/340 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            D+++   IG G  G         + + D       +   K ++   + + +K      E
Sbjct: 6   EDYEVLYTIGTGSYGRCQKI----RRKSDG-----KILVWKELDYGSMTEAEK-QMLVSE 55

Query: 140 KKILKMLDHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARF 195
             +L+ L HP +   Y       +    IVME+C GGDL S+  +  +  +         
Sbjct: 56  VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115

Query: 196 YAAEVLVALEYLH-----MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
              ++ +AL+  H        +++RDLKP NV +    ++ L DF L+            
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA------------ 163

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                      R          T                FVGT 
Sbjct: 164 ---------------------------RILNHDTSFAKT----------------FVGTP 180

Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
            Y+SPE  +  S+    D W+ G  +YE+     PF A S +     I +         P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI---P 237

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
              S+    ++I+ +LN    +R        ++  +P   
Sbjct: 238 YRYSD-ELNEIITRMLNLKDYHRP----SVEEILENPLIL 272

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  173 bits (441), Expect = 6e-51
 Identities = 84/366 (22%), Positives = 140/366 (38%), Gaps = 82/366 (22%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
            +T    + F     +G+G    V+L       ++  G      +A+K + K    +   
Sbjct: 2   MQTTNIRKTFIFMEVLGSGAFSEVFLVK-----QRLTGKL----FALKCIKKSPAFRDSS 52

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLT 191
           +     E  +LK + H  + TL   +E++    +VM+  SGG+L   +  +     ++  
Sbjct: 53  LEN---EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG---VYTEK 106

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVE 248
            A     +VL A++YLH  GI++RDLKPEN+L  +   +  IM++DF LS          
Sbjct: 107 DASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS---------- 156

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
                                        +   +  + T                    G
Sbjct: 157 -----------------------------KMEQNGIMSTA------------------CG 169

Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ 368
           T  YV+PEV +   +  AVD W+ G+  Y ++ G  PF   +       I +    F + 
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP 229

Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGM 428
               +SE  A+D I  LL KDP  R           +HP+  G N AL R + P     +
Sbjct: 230 FWDDISE-SAKDFICHLLEKDPNERY----TCEKALSHPWIDG-NTALHRDIYPSVSLQI 283

Query: 429 RRQKTM 434
           ++    
Sbjct: 284 QKNFAK 289

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  174 bits (443), Expect = 9e-51
 Identities = 82/383 (21%), Positives = 130/383 (33%), Gaps = 109/383 (28%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-- 129
           G       + + L   IG G  G V +                   A+K++NK  + +  
Sbjct: 18  GGSLLELQKKYHLKGAIGQGSYGVVRVA-----IENQTRAI----RAIKIMNKNKIRQIN 68

Query: 130 KKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL------------- 176
            K V R + E +++K L HP +  LY  +E   + C+VME C GG L             
Sbjct: 69  PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG 128

Query: 177 -------------------------HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG 211
                                         +                ++  AL YLH  G
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188

Query: 212 IIYRDLKPENVLVRSDG--HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYS 269
           I +RD+KPEN L  ++    I L DF L                                
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGL-------------------------------- 216

Query: 270 TRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH--GNAV 327
                       SK+   L     +          +  GT  +V+PEV +  +   G   
Sbjct: 217 ------------SKEFYKLNNGEYYGMT-------TKAGTPYFVAPEVLNTTNESYGPKC 257

Query: 328 DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN 387
           D W+ G+ ++ ++ G  PF   ++  T+  ++ K L F   + + +S   ARDL+S LLN
Sbjct: 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSP-LARDLLSNLLN 316

Query: 388 KDPCNRLGSKRGAADVKTHPFFK 410
           ++   R      A     HP+  
Sbjct: 317 RNVDERF----DAMRALQHPWIS 335

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  177 bits (451), Expect = 1e-50
 Identities = 86/346 (24%), Positives = 133/346 (38%), Gaps = 78/346 (22%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
              T +    +   R +G G  G V LC          G E     A+KV++K  +++K 
Sbjct: 18  QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-----GQE----CAVKVISKRQVKQKT 68

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
                  E ++LK LDHP +  LY  FE   +  +V E  +GG+L         KRFS  
Sbjct: 69  DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEV 126

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVE 248
            A     +VL  + Y+H   I++RDLKPEN+L+ S   D +I + D              
Sbjct: 127 DAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID-------------- 172

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFV 307
                                          FG S   +    ++              +
Sbjct: 173 -------------------------------FGLSTHFE---ASKKMK---------DKI 189

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
           GT  Y++PEV  G ++    D W+ G+ +Y ++ G  PF   +    L+ + K   TF  
Sbjct: 190 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
                +SE  A+DLI  +L   P  R+     A D   H + +   
Sbjct: 249 PQWKKVSE-SAKDLIRKMLTYVPSMRI----SARDALDHEWIQTYT 289

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  171 bits (436), Expect = 2e-50
 Identities = 64/350 (18%), Positives = 106/350 (30%), Gaps = 103/350 (29%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
              DF     IG+G  G V+      K+R D        Y +K V        +K  R  
Sbjct: 9   FGMDFKEIELIGSGGFGQVFKA----KHRIDG-----KTYVIKRVKYN----NEKAER-- 53

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFS----------------CIVMEFCSGGDLHSLRH 181
            E K L  LDH  +      ++  ++                  I MEFC  G L     
Sbjct: 54  -EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112

Query: 182 KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
           K+  ++     A     ++   ++Y+H   +I RDLKP N+ +     + + D       
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD------- 165

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                                                 FG          R         
Sbjct: 166 --------------------------------------FGLVTSLKNDGKR--------- 178

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVK 360
                 GT  Y+SPE  S   +G  VD +A G+ + E+++   T F          ++  
Sbjct: 179 --TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK---FFTDLRD 233

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             +           +   + L+  LL+K P +R       +++       
Sbjct: 234 GII------SDIFDK-KEKTLLQKLLSKKPEDRP----NTSEILRTLTVW 272

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  174 bits (443), Expect = 3e-50
 Identities = 74/409 (18%), Positives = 130/409 (31%), Gaps = 102/409 (24%)

Query: 16  RTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKT 75
             +S         +  ++       + +     ++       +++      R        
Sbjct: 5   HHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGR-------- 56

Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR 135
                 + + ++IG+G    V+             +E   +YA+K VN E     + +  
Sbjct: 57  -----IYSILKQIGSGGSSKVFQVL----------NEKKQIYAIKYVNLEEA-DNQTLDS 100

Query: 136 AEMEKKILKMLDHPFLP--TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
              E   L  L         LY       +  +VME C   DL+S   K   K       
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK--KKSIDPWER 157

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
           + Y   +L A+  +H  GI++ DLKP N L+  DG + L DF +                
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGI---------------- 200

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                       + ++Q  T + +           S VG   Y+
Sbjct: 201 ----------------------------ANQMQPDTTSVVKD---------SQVGAVNYM 223

Query: 314 SPEVASGGS-----------HGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKK 361
            PE     S                D W+ G  +Y M YG+TPF    N+ + L  I+  
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                   P    +   +D++   L +DP  R+       ++  HP+ +
Sbjct: 284 NHEIEF--PDIPEK-DLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  170 bits (433), Expect = 5e-50
 Identities = 80/334 (23%), Positives = 128/334 (38%), Gaps = 79/334 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F   R++G+G  G V+L    +      G E      +K +NK+    +  + + E E +
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSS-----GLE----RVIKTINKDRS--QVPMEQIEAEIE 72

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFYAAE 199
           +LK LDHP +  ++  FE  +   IVME C GG+L    +  +   K  S         +
Sbjct: 73  VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
           ++ AL Y H   ++++DLKPEN+L +       I + DF L+                  
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA------------------ 174

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                  F S +  T                 +  GT  Y++PE
Sbjct: 175 ---------------------ELFKSDEHST-----------------NAAGTALYMAPE 196

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V          D W+ G+ +Y ++ G  PF   S E   +    K   +  +    ++  
Sbjct: 197 VFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTP- 253

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            A DL+  +L KDP  R      AA V  H +FK
Sbjct: 254 QAVDLLKQMLTKDPERRP----SAAQVLHHEWFK 283

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  175 bits (445), Expect = 1e-49
 Identities = 84/386 (21%), Positives = 138/386 (35%), Gaps = 81/386 (20%)

Query: 45  KSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNK 104
                +     +   D   +         K G     +   +++G+G  G V LC   +K
Sbjct: 4   HHHHSSGRENLYFQGDLQAT--PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCR--DK 59

Query: 105 YRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS 164
                        A+K++ K  +       +   E  +LK+LDHP +  LY  FE     
Sbjct: 60  VTHVE-------RAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY 111

Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            +VME   GG+L          +F+   A     +VL  + YLH   I++RDLKPEN+L+
Sbjct: 112 YLVMECYKGGEL--FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLL 169

Query: 225 RS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG 281
            S   D  I + D                                             FG
Sbjct: 170 ESKEKDALIKIVD---------------------------------------------FG 184

Query: 282 -SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI 340
            S   +     +              +GT  Y++PEV     +    D W+ G+ ++ ++
Sbjct: 185 LSAVFE---NQKKMK---------ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILL 231

Query: 341 YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA 400
            G  PF   +++  LR + K   TF +    ++SE  A+DLI  +L  D   R+     A
Sbjct: 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE-GAKDLIKQMLQFDSQRRI----SA 286

Query: 401 ADVKTHPFFKGLNFALIRSLTPPEIP 426
                HP+ K +       +  P + 
Sbjct: 287 QQALEHPWIKEMCSKKESGIELPSLA 312

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  175 bits (445), Expect = 1e-49
 Identities = 82/334 (24%), Positives = 124/334 (37%), Gaps = 77/334 (23%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +++   +G G  G V  C            E    YA+KV+NK    K K       E 
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRIT-----QQE----YAVKVINKASA-KNKDTSTILREV 72

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++LK LDHP +  L+   E S+   IV E  +GG+L         KRFS   A     +V
Sbjct: 73  ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQV 130

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
              + Y+H   I++RDLKPEN+L+ S   D  I + DF LS                   
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------------------- 171

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                 F                          +GT  Y++PEV
Sbjct: 172 --------------------TCFQQNTKMK-----------------DRIGTAYYIAPEV 194

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
              G++    D W+ G+ +Y ++ G  PF   +    L+ +      F      ++S+  
Sbjct: 195 LR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD-D 252

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           A+DLI  +L   P  R+     A     HP+ + 
Sbjct: 253 AKDLIRKMLTFHPSLRI----TATQCLEHPWIQK 282

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  170 bits (432), Expect = 2e-49
 Identities = 70/359 (19%), Positives = 124/359 (34%), Gaps = 89/359 (24%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +   +G G+ G V+ C        +          Y  K V      K       + E
Sbjct: 7   YMIAEDLGRGEFGIVHRC-------VETSSKKT----YMAKFVKV----KGTDQVLVKKE 51

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT--SARFYA 197
             IL +  H  +  L+  FE+     ++ EF SG D+     +     F L       Y 
Sbjct: 52  ISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF---ERINTSAFELNEREIVSYV 108

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNAIPAVESPASSPE 255
            +V  AL++LH   I + D++PEN++ ++     I + +F                    
Sbjct: 109 HQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF-------------------- 148

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                            +R L         + L                      EY +P
Sbjct: 149 ---------------GQARQLK---PGDNFRLL------------------FTAPEYYAP 172

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           EV        A D W+ G  +Y ++ G  PF A +N+  + NI+    TF  ++   +S 
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI 232

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTM 434
             A D +  LL K+  +R+     A++   HP+ K         ++   I  ++ ++  
Sbjct: 233 -EAMDFVDRLLVKERKSRM----TASEALQHPWLKQKI----ERVSTKVIRTLKHRRYY 282

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  170 bits (433), Expect = 4e-49
 Identities = 48/337 (14%), Positives = 89/337 (26%), Gaps = 85/337 (25%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           L  +   +H  +G G    VY              +    + +KV          + +  
Sbjct: 62  LGSKLVYVHHLLGEGAFAQVYEA----TQGDLNDAKNKQKFVLKVQKPA---NPWEFYIG 114

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL---RHKQPHKRFSLTSA 193
               + LK          Y+     N S +V E  S G L +        P K       
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLV 174

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-----------DGHIMLSDFDLSLCSN 242
             +A  +L  +E +H   II+ D+KP+N ++ +              + L D   S+   
Sbjct: 175 ISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK 234

Query: 243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
             P                                               +F        
Sbjct: 235 LFP--------------------------------------------KGTIFT------- 243

Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKK 361
             +   T  +   E+ S       +D++     +Y M++G          E     + ++
Sbjct: 244 --AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRR 301

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR 398
                  +          +    +LN   C+ L S  
Sbjct: 302 LPHLDMWN----------EFFHVMLNIPDCHHLPSLD 328

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  175 bits (445), Expect = 4e-49
 Identities = 83/412 (20%), Positives = 136/412 (33%), Gaps = 90/412 (21%)

Query: 8   EPPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIR 67
             P + T       +                 E          +S          +    
Sbjct: 91  SKPCEPTAPVLIPGDERKRRRGYDVD------EQGKIVRGKGTVSSNYDNYVFDIWKQYY 144

Query: 68  SATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKE 125
                 K       +D+H  +G G  G V+          +R  G+     +A K V   
Sbjct: 145 PQPVEIKHDHVLDHYDIHEELGTGAFGVVHRV-------TERATGNN----FAAKFVMTP 193

Query: 126 VLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH 185
               K+ V +   E + + +L HP L  L+  FE  N   ++ EF SGG+L     K   
Sbjct: 194 HESDKETVRK---EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF---EKVAD 247

Query: 186 KRFSLT--SARFYAAEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLSLCS 241
           +   ++   A  Y  +V   L ++H    ++ DLKPEN++   +    + L DF      
Sbjct: 248 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF------ 301

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                                         L+  L+     + ++               
Sbjct: 302 -----------------------------GLTAHLD---PKQSVKVT------------- 316

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
                 GT E+ +PEVA G   G   D W+ G+  Y ++ G +PF   +++ TLRN+   
Sbjct: 317 -----TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
                  + S +SE   +D I  LL  DP  R+           HP+    N
Sbjct: 372 DWNMDDSAFSGISE-DGKDFIRKLLLADPNTRM----TIHQALEHPWLTPGN 418

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  170 bits (433), Expect = 6e-49
 Identities = 80/376 (21%), Positives = 139/376 (36%), Gaps = 84/376 (22%)

Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKK 131
           K G  +  +D+   +G+G  G V+ C        ++  G      +  K +N      K 
Sbjct: 45  KQGSVYDYYDILEELGSGAFGVVHRC-------VEKATGRV----FVAKFINTPYPLDKY 93

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
            V     E  I+  L HP L  L+  FE      +++EF SGG+L     +   + + ++
Sbjct: 94  TVKN---EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF---DRIAAEDYKMS 147

Query: 192 --SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNAIPAV 247
                 Y  +    L+++H   I++ D+KPEN++  +     + + DF            
Sbjct: 148 EAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF------------ 195

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                                   L+  LN     + ++                     
Sbjct: 196 -----------------------GLATKLN---PDEIVKVT------------------T 211

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
            T E+ +PE+      G   D WA G+  Y ++ G +PFA   +  TL+N+ +    F  
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG 427
            + SS+S   A+D I  LL K+P  RL       D   HP+ KG +  L   +       
Sbjct: 272 DAFSSVSP-EAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLTSRIPSSRYNK 326

Query: 428 MRRQKTMPFPDQKIKS 443
           +R++    + D     
Sbjct: 327 IRQKIKEKYADWPAPQ 342

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  167 bits (425), Expect = 9e-49
 Identities = 80/354 (22%), Positives = 132/354 (37%), Gaps = 86/354 (24%)

Query: 78  TFRDF-DLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKKKVH 134
              D  ++   +G+G    V  C       + +  G E    YA K + K  L   ++  
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKC-------RQKGTGKE----YAAKFIKKRRLSSSRRGV 50

Query: 135 RAEM---EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSL 190
             E    E  IL+ + HP + TL+  FE      +++E  SGG+L   L  K   +  + 
Sbjct: 51  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTE 107

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPA 246
             A  +  ++L  + YLH   I + DLKPEN+++      +  I L DF +         
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI--------- 158

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                     +  +       + + +                  
Sbjct: 159 --------------------------AHKIE---AGNEFKNI------------------ 171

Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
            GT E+V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F 
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231

Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL 420
            +  S+ SE  A+D I  LL KDP  R+      A    H + K +    +R  
Sbjct: 232 EEYFSNTSE-LAKDFIRRLLVKDPKRRM----TIAQSLEHSWIKAIRRRNVRGE 280

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  167 bits (425), Expect = 2e-48
 Identities = 56/325 (17%), Positives = 106/325 (32%), Gaps = 71/325 (21%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +   +++G G    V L     +   D        YA+K +     + +++  R   E
Sbjct: 29  KHYLFIQKLGEGGFSYVDLV----EGLHDGHF-----YALKRILCHEQQDREEAQR---E 76

Query: 140 KKILKMLDHPFLPTLYAEFEASNFS----CIVMEFCSGGDLHSL--RHKQPHKRFSLTSA 193
             + ++ +HP +  L A       +     +++ F   G L +   R K      +    
Sbjct: 77  ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
            +    +   LE +H  G  +RDLKP N+L+  +G  +L D                   
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS---------------- 180

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                        + +  L  +  +                              T  Y 
Sbjct: 181 --MNQACIHVEGSRQALTLQDWAAQ----------------------------RCTISYR 210

Query: 314 SPEVASGGSH---GNAVDWWAFGIFIYEMIYGRTPF-AAPSNETTLRNIVKKPLTFPTQS 369
           +PE+ S  SH       D W+ G  +Y M++G  P+        ++   V+  L+ P   
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP--Q 268

Query: 370 PSSMSEYHARDLISGLLNKDPCNRL 394
               S      L++ ++  DP  R 
Sbjct: 269 SPRHSS-ALWQLLNSMMTVDPHQRP 292

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  166 bits (423), Expect = 2e-48
 Identities = 82/334 (24%), Positives = 126/334 (37%), Gaps = 79/334 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +++   +G G  G V  C            E    YA+KV+NK    K K       E +
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRIT-----QQE----YAVKVINKASA-KNKDTSTILREVE 73

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYAAEV 200
           +LK LDHP +  L+   E S+   IV E  +GG+L   +  +   KRFS   A     +V
Sbjct: 74  LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQV 130

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
              + Y+H   I++RDLKPEN+L+ S   D  I + DF LS                   
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------------------- 171

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                                 F                          +GT  Y++PEV
Sbjct: 172 --------------------TCFQQNTKMK-----------------DRIGTAYYIAPEV 194

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
              G++    D W+ G+ +Y ++ G  PF   +    L+ +      F      ++S+  
Sbjct: 195 LR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD-D 252

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           A+DLI  +L   P  R+     A     HP+ + 
Sbjct: 253 AKDLIRKMLTFHPSLRI----TATQCLEHPWIQK 282

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  165 bits (421), Expect = 5e-48
 Identities = 76/317 (23%), Positives = 116/317 (36%), Gaps = 71/317 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F + ++IG G    VY  +         G       A+K V    L   K       E 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAA-----CLLDGV----PVALKKVQIFDLMDAKARADCIKEI 83

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
            +LK L+HP +   YA F   N   IV+E    GDL  +    K+  +     +   Y  
Sbjct: 84  DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++  ALE++H   +++RD+KP NV + + G + L D  L                     
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG-------------------- 183

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                            R F ++  AA S   VGT  Y+SPE  
Sbjct: 184 ---------------------------------RFFSSKTTAAHSL--VGTPYYMSPERI 208

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTL-RNIVKKPLTFPTQSPSSMSEY 376
               +    D W+ G  +YEM   ++PF     N  +L + I +    +P       SE 
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSE- 265

Query: 377 HARDLISGLLNKDPCNR 393
             R L++  +N DP  R
Sbjct: 266 ELRQLVNMCINPDPEKR 282

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  165 bits (419), Expect = 7e-48
 Identities = 71/339 (20%), Positives = 127/339 (37%), Gaps = 81/339 (23%)

Query: 79  FRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           F D +D+   +G G    V  C       +  G E    +A K++N + L   +   + E
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCV-----HKTTGLE----FAAKIINTKKL-SARDFQKLE 53

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFY 196
            E +I + L HP +  L+   +  +F  +V +  +GG+L   +  +   + +S   A   
Sbjct: 54  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHC 110

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASS 253
             ++L ++ Y H  GI++R+LKPEN+L+ S      + L+D                   
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD------------------- 151

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                     FG + ++     +  +           F GT  Y
Sbjct: 152 --------------------------FGLAIEVN---DSEAWH---------GFAGTPGY 173

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           +SPEV     +   VD WA G+ +Y ++ G  PF           I      +P+    +
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           ++   A+ LI  +L  +P  R+     A      P+   
Sbjct: 234 VTP-EAKSLIDSMLTVNPKKRI----TADQALKVPWICN 267

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  167 bits (424), Expect = 9e-48
 Identities = 50/419 (11%), Positives = 100/419 (23%), Gaps = 108/419 (25%)

Query: 40  ELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLC 99
           +     +S    S      S   ++  +      + G   R       +G  D       
Sbjct: 33  QANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEA 92

Query: 100 SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML------------- 146
           +      Q+ G      + + V           + + + E   L++L             
Sbjct: 93  T-----DQETGES----FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL 143

Query: 147 ------------DHPFLPTLYAEFEASNFS--CIVMEFCSGGDLHSL-----RHKQPHKR 187
                           +  +  +           +       +L +       H   HK 
Sbjct: 144 RFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKS 202

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV 247
               +      +V+  L  LH  G+++  L+P ++++   G + L+ F+  +      A 
Sbjct: 203 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---AR 259

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
              + S     P                                                
Sbjct: 260 VVSSVSRGFEPP---------------------------------------------ELE 274

Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
                +S           + D WA G+ IY +     P    +       I +     P 
Sbjct: 275 ARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQ 334

Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
                      R L+ G L     +RL            P ++ L     R+     +P
Sbjct: 335 P---------VRALLEGFLRYPKEDRL----LPLQAMETPEYEQL-----RTELSAALP 375

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  170 bits (433), Expect = 2e-47
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
            +  +T   F  +R +G G  G V  C +    +         +YA K + K+ ++K+K 
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKG 227

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
              A  EK+IL+ ++  F+ +L   +E  +  C+V+   +GGDL    +      F    
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A FYAAE+   LE LH   I+YRDLKPEN+L+   GHI +SD  L+
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  140 bits (355), Expect = 1e-36
 Identities = 47/131 (35%), Positives = 62/131 (47%), Gaps = 4/131 (3%)

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
                VGT  Y++PEV     +  + DWWA G  +YEMI G++PF     +     + + 
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL 400

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--R 418
               P +     S   AR L S LL KDP  RLG +   A +VK HP FK LNF  +   
Sbjct: 401 VKEVPEEYSERFSP-QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAG 459

Query: 419 SLTPPEIPGMR 429
            L PP  P  +
Sbjct: 460 MLEPPFKPDPQ 470

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  165 bits (420), Expect = 3e-47
 Identities = 84/433 (19%), Positives = 157/433 (36%), Gaps = 92/433 (21%)

Query: 9   PPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLK-PHRSSDFAYSAIR 67
                       + S    ++   S + L+  +P        L++  P   + F +  + 
Sbjct: 20  YFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIV- 78

Query: 68  SATFGRKTGLTFRDFDLHRR--IGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVN 123
                 K G     + + +   +G G  G V+ C       ++   G +     A K++ 
Sbjct: 79  ----TAKQGAVNSFYTVSKTEILGGGRFGQVHKC-------EETATGLK----LAAKIIK 123

Query: 124 KEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ 183
              ++ K++V     E  ++  LDH  L  LY  FE+ N   +VME+  GG+L     + 
Sbjct: 124 TRGMKDKEEVKN---EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF---DRI 177

Query: 184 PHKRFSLT--SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDFDLSL 239
             + ++LT      +  ++   + ++H + I++ DLKPEN+L  +     I + DF    
Sbjct: 178 IDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDF---- 233

Query: 240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV 299
                                           L+R        +K++             
Sbjct: 234 -------------------------------GLARRYK---PREKLKVN----------- 248

Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
                   GT E+++PEV +        D W+ G+  Y ++ G +PF   ++  TL NI+
Sbjct: 249 -------FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301

Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
                   +    +SE  A++ IS LL K+   R+     A++   HP+          S
Sbjct: 302 ACRWDLEDEEFQDISE-EAKEFISKLLIKEKSWRI----SASEALKHPWLSDHKLHSRLS 356

Query: 420 LTPPEIPGMRRQK 432
               +  G   Q 
Sbjct: 357 AQKKKNRGSDAQD 369

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  168 bits (428), Expect = 4e-47
 Identities = 76/399 (19%), Positives = 133/399 (33%), Gaps = 88/399 (22%)

Query: 47  SPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYR 106
              +   +       A +        +K G     +   R++G+G  G V LC    K  
Sbjct: 5   HHHSSGRENLYFQGIAIN--PGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCK--EKNG 60

Query: 107 QDRGHEPCCLYAMKVVNKEVL----------EKKKKVHRAEMEKKILKMLDHPFLPTLYA 156
                      A+KV+ K               +K       E  +LK LDHP +  L+ 
Sbjct: 61  HSE-------KAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113

Query: 157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
            FE   +  +V EF  GG+L          +F    A     ++L  + YLH   I++RD
Sbjct: 114 VFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRD 171

Query: 217 LKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLS 273
           +KPEN+L+ +     +I + DF L                                    
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGL------------------------------------ 195

Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFG 333
                   S        +               +GT  Y++PEV     +    D W+ G
Sbjct: 196 --------SSFFS---KDYKLR---------DRLGTAYYIAPEVLKK-KYNEKCDVWSCG 234

Query: 334 IFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           + +Y ++ G  PF   +++  ++ + K    F      ++S+  A++LI  +L  D   R
Sbjct: 235 VIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD-EAKELIKLMLTYDYNKR 293

Query: 394 LGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK 432
                 A +     + K     + +S        +   +
Sbjct: 294 C----TAEEALNSRWIKKYANNINKSDQKTLCGALSNMR 328

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  163 bits (415), Expect = 7e-47
 Identities = 74/341 (21%), Positives = 130/341 (38%), Gaps = 83/341 (24%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKKKVHRAEM- 138
           +D    +G+G    V  C       +++  G +    YA K + K   +  ++    E  
Sbjct: 13  YDTGEELGSGQFAVVKKC-------REKSTGLQ----YAAKFIKKRRTKSSRRGVSREDI 61

Query: 139 --EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E  ILK + HP + TL+  +E      +++E  +GG+L      +  +  +   A  +
Sbjct: 62  EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD-FLAE-KESLTEEEATEF 119

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPAVESPAS 252
             ++L  + YLH L I + DLKPEN+++         I + DF                 
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF----------------- 162

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                              L+  ++      + + +                   GT E+
Sbjct: 163 ------------------GLAHKID---FGNEFKNI------------------FGTPEF 183

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  +  S+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
            S   A+D I  LL KDP  R+       D   HP+ K  +
Sbjct: 244 TSA-LAKDFIRRLLVKDPKKRM----TIQDSLQHPWIKPKD 279

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  163 bits (414), Expect = 9e-47
 Identities = 77/388 (19%), Positives = 143/388 (36%), Gaps = 84/388 (21%)

Query: 55  PHRSSDFAYSAIRSATFGRKTGLTFRDF-DLHRR-IGAGDIGTVYLCSLNNKYRQDR--G 110
            H SS           + +     F +F  L  + +G G    V  C         +  G
Sbjct: 5   HHHSSGVDLG--TENLYFQSME-NFNNFYILTSKELGRGKFAVVRQC-------ISKSTG 54

Query: 111 HEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH-PFLPTLYAEFEASNFSCIVME 169
            E    YA K + K     +        E  +L++    P +  L+  +E ++   +++E
Sbjct: 55  QE----YAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109

Query: 170 FCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--- 226
           + +GG++ SL   +  +  S         ++L  + YLH   I++ DLKP+N+L+ S   
Sbjct: 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169

Query: 227 DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQ 286
            G I + DF                                    +SR +     + +++
Sbjct: 170 LGDIKIVDF-----------------------------------GMSRKIG---HACELR 191

Query: 287 TLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
            +                  +GT EY++PE+ +      A D W  GI  Y ++   +PF
Sbjct: 192 EI------------------MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233

Query: 347 AAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH 406
               N+ T  NI +  + +  ++ SS+S+  A D I  LL K+P  R      A    +H
Sbjct: 234 VGEDNQETYLNISQVNVDYSEETFSSVSQ-LATDFIQSLLVKNPEKRP----TAEICLSH 288

Query: 407 PFFKGLNFALIRSLTPPEIPGMRRQKTM 434
            + +  +F  +            +  ++
Sbjct: 289 SWLQQWDFENLFHPEETSSSSQTQDHSV 316

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  162 bits (413), Expect = 1e-46
 Identities = 77/340 (22%), Positives = 126/340 (37%), Gaps = 85/340 (25%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKKKVHRAEM- 138
           +D+   +G+G    V  C       +++  G E    YA K + K      ++    E  
Sbjct: 14  YDIGEELGSGQFAIVKKC-------REKSTGLE----YAAKFIKKRQSRASRRGVSREEI 62

Query: 139 --EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARF 195
             E  IL+ + H  + TL+  +E      +++E  SGG+L   L  K+     S   A  
Sbjct: 63  EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATS 119

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPAVESPA 251
           +  ++L  + YLH   I + DLKPEN+++        HI L DF L              
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL-------------- 165

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                +  +       + + +                   GT E
Sbjct: 166 ---------------------AHEIE---DGVEFKNI------------------FGTPE 183

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           +V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  +  S
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
             SE  A+D I  LL K+   RL       +   HP+   
Sbjct: 244 HTSE-LAKDFIRKLLVKETRKRL----TIQEALRHPWITP 278

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  163 bits (415), Expect = 1e-46
 Identities = 76/364 (20%), Positives = 134/364 (36%), Gaps = 82/364 (22%)

Query: 55  PHRSS-DFAYSAIRSATFGRKTGLTFRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHE 112
           PH +S        R + F       F D +D+   +G G    V  C       +  G E
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCV-----HKTTGLE 56

Query: 113 PCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCS 172
               +A K++N + L   +   + E E +I + L HP +  L+   +  +F  +V +  +
Sbjct: 57  ----FAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 111

Query: 173 GGDL-HSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DG 228
           GG+L   +  +   + +S   A     ++L ++ Y H  GI++R+LKPEN+L+ S     
Sbjct: 112 GGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168

Query: 229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQT 287
            + L+D                                             FG + ++  
Sbjct: 169 AVKLAD---------------------------------------------FGLAIEVN- 182

Query: 288 LTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA 347
              +  +           F GT  Y+SPEV     +   VD WA G+ +Y ++ G  PF 
Sbjct: 183 --DSEAWH---------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 231

Query: 348 APSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP 407
                     I      +P+    +++   A+ LI  +L  +P  R+     A      P
Sbjct: 232 DEDQHRLYAQIKAGAYDYPSPEWDTVTP-EAKSLIDSMLTVNPKKRI----TADQALKVP 286

Query: 408 FFKG 411
           +   
Sbjct: 287 WICN 290

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  162 bits (411), Expect = 6e-46
 Identities = 78/340 (22%), Positives = 127/340 (37%), Gaps = 85/340 (25%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVLEKKKKVHRAEM- 138
           +D+   +G+G    V  C       +++  G E    YA K + K      ++    E  
Sbjct: 14  YDIGEELGSGQFAIVKKC-------REKSTGLE----YAAKFIKKRQSRASRRGVCREEI 62

Query: 139 --EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARF 195
             E  IL+ + HP + TL+  +E      +++E  SGG+L   L  K+     S   A  
Sbjct: 63  EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATS 119

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPAVESPA 251
           +  ++L  + YLH   I + DLKPEN+++        HI L DF                
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG--------------- 164

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                               L+  +       + + +                   GT E
Sbjct: 165 --------------------LAHEIE---DGVEFKNI------------------FGTPE 183

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           +V+PE+ +    G   D W+ G+  Y ++ G +PF   + + TL NI      F  +  S
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
             SE  A+D I  LL K+   RL       +   HP+   
Sbjct: 244 QTSE-LAKDFIRKLLVKETRKRL----TIQEALRHPWITP 278

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  163 bits (413), Expect = 7e-46
 Identities = 50/408 (12%), Positives = 97/408 (23%), Gaps = 117/408 (28%)

Query: 67  RSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV 126
           +      + G   R       +G  D              Q+ G      + + V     
Sbjct: 65  QPFRVESELGERPRTLVRGTVLGQEDPYAYLEA-----TDQETGES----FEVHVPYFTE 115

Query: 127 LEKKKKVHRAEMEKKILK----------------------MLDHPFLPTLYAEFEASNFS 164
                 + + + E   L+                      ++  P    +          
Sbjct: 116 RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM 175

Query: 165 CIVMEF-------CSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYR 215
            ++  F        +      +   H   HK     +      +V+  L  LH  G+++ 
Sbjct: 176 WVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235

Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRF 275
            L+P ++++   G + L+ F+                                       
Sbjct: 236 YLRPVDIVLDQRGGVFLTGFEHL------------------------------------- 258

Query: 276 LNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN-----AVDWW 330
                G+     ++P     A P            E  +  +   G H       A D W
Sbjct: 259 --VRDGAS---AVSPIGRGFAPP------------ETTAERMLPFGQHHPTLMTFAFDTW 301

Query: 331 AFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP 390
             G+ IY +     P    +       I +     P            R L+ G L    
Sbjct: 302 TLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQP---------VRALLEGFLRYPK 352

Query: 391 CNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPD 438
            +RL            P ++ L     R+     +P  +         
Sbjct: 353 EDRL----LPLQAMETPEYEQL-----RTELSAALPLYQTDGEPTREG 391

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  159 bits (404), Expect = 3e-45
 Identities = 75/374 (20%), Positives = 143/374 (38%), Gaps = 92/374 (24%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G G       C       +         +A+K+++K      +     + E   LK+
Sbjct: 17  KPLGEGSFSICRKC-----VHKKSNQA----FAVKIISK------RMEANTQKEITALKL 61

Query: 146 LD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
            + HP +  L+  F     + +VME  +GG+L      +  K FS T A +   +++ A+
Sbjct: 62  CEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAV 119

Query: 205 EYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
            ++H +G+++RDLKPEN+L      +  I + DF                          
Sbjct: 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG------------------------- 154

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
                      +R       ++ ++T                     T  Y +PE+ +  
Sbjct: 155 ----------FARLKP--PDNQPLKT------------------PCFTLHYAAPELLNQN 184

Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-------LRNIVKKPLTFPTQSPSSMS 374
            +  + D W+ G+ +Y M+ G+ PF +     T       ++ I K   +F  ++  ++S
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTM 434
           +  A+DLI GLL  DP  RL      + ++ + + +  +      L  P+I G       
Sbjct: 245 Q-EAKDLIQGLLTVDPNKRL----KMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVH 299

Query: 435 PFPDQKIKSQSTAF 448
                 +K+   AF
Sbjct: 300 T----CVKATFHAF 309

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  160 bits (406), Expect = 3e-45
 Identities = 54/408 (13%), Positives = 99/408 (24%), Gaps = 111/408 (27%)

Query: 43  TSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLN 102
             + + +  +      +   +      T         R   L   +  GD   V+L    
Sbjct: 25  CREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLV--- 81

Query: 103 NKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASN 162
                +R  +    +A+KV        + ++ R          L                
Sbjct: 82  --RDVERLED----FALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLL 135

Query: 163 FS--------------------------CIVMEFCSGGDLHSL-----RHKQPHKRFSLT 191
            S                           ++M   S  DL  L               + 
Sbjct: 136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV-DLELLFSTLDFVYVFRGDEGIL 194

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
           +     A+++     L   G+++    P+N+ +  DG +ML D                 
Sbjct: 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD----------------- 237

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                         +                V  R  +      
Sbjct: 238 ----------------------------VSA-------------LWKVGTRGPASSVPVT 256

Query: 312 YVSPEV--ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-----LRNIVKKPLT 364
           Y   E   AS  +  +A++ W  G+ IY +     PF   +             V    +
Sbjct: 257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDS 316

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
               S + + ++  + LI   LN D   RL       +    P F  L
Sbjct: 317 LAFGSCTPLPDF-VKTLIGRFLNFDRRRRL----LPLEAMETPEFLQL 359

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  160 bits (406), Expect = 3e-45
 Identities = 93/416 (22%), Positives = 142/416 (34%), Gaps = 95/416 (22%)

Query: 9   PPSDATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRS 68
           P  +   R     +     S+S +  +             ENL  +     D       +
Sbjct: 30  PNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAA 89

Query: 69  ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE 128
             F +K       +D    IG G    V  C       +  GHE    +A+K++      
Sbjct: 90  KEFYQK-------YDPKDVIGRGVSSVVRRCV-----HRATGHE----FAVKIMEVTAER 133

Query: 129 KKKKVHRAEMEK-----KILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRH 181
              +      E       IL+ +  HP + TL   +E+S+F  +V +    G+L   L  
Sbjct: 134 LSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE 193

Query: 182 KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
           K      S    R     +L A+ +LH   I++RDLKPEN+L+  +  I LSD       
Sbjct: 194 K---VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD------- 243

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVA 300
                                                 FG S  ++   P          
Sbjct: 244 --------------------------------------FGFSCHLE---PGEKLR----- 257

Query: 301 ARSCSFVGTHEYVSPEV------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
                  GT  Y++PE+       +   +G  VD WA G+ ++ ++ G  PF        
Sbjct: 258 ----ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM 313

Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           LR I++    F +      S    +DLIS LL  DP  RL     A     HPFF+
Sbjct: 314 LRMIMEGQYQFSSPEWDDRSS-TVKDLISRLLQVDPEARL----TAEQALQHPFFE 364

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  159 bits (403), Expect = 6e-45
 Identities = 86/380 (22%), Positives = 138/380 (36%), Gaps = 84/380 (22%)

Query: 38  SFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDF-DLHRRIGAGDIGTV 96
             +L T     +++S     ++    S +              DF ++   +G G    V
Sbjct: 10  GVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIV 69

Query: 97  YLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA 156
           Y C       + +G      YA+KV+ K              E  +L  L HP +  L  
Sbjct: 70  YRC-------KQKG--TQKPYALKVLKK-----TVDKKIVRTEIGVLLRLSHPNIIKLKE 115

Query: 157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
            FE      +V+E  +GG+L   R  +    +S   A     ++L A+ YLH  GI++RD
Sbjct: 116 IFETPTEISLVLELVTGGELFD-RIVE-KGYYSERDAADAVKQILEAVAYLHENGIVHRD 173

Query: 217 LKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLS 273
           LKPEN+L  +   D  + ++D                                       
Sbjct: 174 LKPENLLYATPAPDAPLKIAD--------------------------------------- 194

Query: 274 RFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAF 332
                 FG SK ++      L           +  GT  Y +PE+  G ++G  VD W+ 
Sbjct: 195 ------FGLSKIVE---HQVLMK---------TVCGTPGYCAPEILRGCAYGPEVDMWSV 236

Query: 333 GIFIYEMIYGRTPFAAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC 391
           GI  Y ++ G  PF     +  + R I+     F +     +S  +A+DL+  L+  DP 
Sbjct: 237 GIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL-NAKDLVRKLIVLDPK 295

Query: 392 NRLGSKRGAADVKTHPFFKG 411
            RL           HP+  G
Sbjct: 296 KRL----TTFQALQHPWVTG 311

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  156 bits (397), Expect = 1e-44
 Identities = 75/355 (21%), Positives = 122/355 (34%), Gaps = 89/355 (25%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
              T   + +++    +G G    V  C       +    E    YA+K+++        
Sbjct: 9   SHSTHGFYENYEPKEILGRGVSSVVRRCI-----HKPTCKE----YAVKIIDVTGGGSFS 59

Query: 132 KVHRAEMEK------KILKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQ 183
                E+ +       IL+ +  HP +  L   +E + F  +V +    G+L   L  K 
Sbjct: 60  AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK- 118

Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
                S    R     +L  +  LH L I++RDLKPEN+L+  D +I L+D         
Sbjct: 119 --VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD--------- 167

Query: 244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAAR 302
                                               FG S ++    P            
Sbjct: 168 ------------------------------------FGFSCQLD---PGEKLR------- 181

Query: 303 SCSFVGTHEYVSPEV------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
                GT  Y++PE+       +   +G  VD W+ G+ +Y ++ G  PF        LR
Sbjct: 182 --EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239

Query: 357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
            I+     F +      S+   +DL+S  L   P  R      A +   HPFF+ 
Sbjct: 240 MIMSGNYQFGSPEWDDYSD-TVKDLVSRFLVVQPQKRY----TAEEALAHPFFQQ 289

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  157 bits (399), Expect = 2e-44
 Identities = 81/372 (21%), Positives = 133/372 (35%), Gaps = 90/372 (24%)

Query: 70  TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMKVVNKEVL 127
              R +      +++   IG G       C         +    E    +A+K+++K   
Sbjct: 12  QLHRNSIQFTDGYEVKEDIGVGSYSVCKRC-------IHKATNME----FAVKIIDK--- 57

Query: 128 EKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
             K+       E +IL     HP + TL   ++   +  +V E   GG+L  L      K
Sbjct: 58  -SKRDPTE---EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL--LDKILRQK 111

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH----IMLSDFDLSLCSN 242
            FS   A      +   +EYLH  G+++RDLKP N+L   +      I + DF       
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG------ 165

Query: 243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
                                         ++ L     +  + T               
Sbjct: 166 -----------------------------FAKQLRA--ENGLLMTP-------------- 180

Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---LRNIV 359
                 T  +V+PEV     +  A D W+ G+ +Y M+ G TPFA   ++T    L  I 
Sbjct: 181 ----CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG 236

Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
               +      +S+S+  A+DL+S +L+ DP  RL     AA V  HP+    +      
Sbjct: 237 SGKFSLSGGYWNSVSD-TAKDLVSKMLHVDPHQRL----TAALVLRHPWIVHWDQLPQYQ 291

Query: 420 LTPPEIPGMRRQ 431
           L   + P + + 
Sbjct: 292 LNRQDAPHLVKG 303

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  156 bits (396), Expect = 3e-44
 Identities = 59/368 (16%), Positives = 107/368 (29%), Gaps = 110/368 (29%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            + L   +G G    V+         +  G      +A+KV N     +   V   E E 
Sbjct: 10  LWLLSDILGQGATANVFRG-----RHKKTGDL----FAIKVFNNISFLRPVDVQMREFE- 59

Query: 141 KILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
            +LK L+H  +  L+A  E   +    ++MEFC  G L++ L           +      
Sbjct: 60  -VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPAVESPASS 253
            +V+  + +L   GI++R++KP N++            L+DF  +               
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA--------------- 163

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                        ++  +L                   GT EY+
Sbjct: 164 -----------------------RELEDDEQFVSL------------------YGTEEYL 182

Query: 314 SPEVASGG--------SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK---- 361
            P++             +G  VD W+ G+  Y    G  PF         + ++ K    
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242

Query: 362 ---------------PLTFPTQSP-----SSMSEYHARDLISGLLNKDPCNRLGSKRGAA 401
                          P+ +    P     S   +     +++ +L  D     G      
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD---- 298

Query: 402 DVKTHPFF 409
                   
Sbjct: 299 QFFAETSD 306

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  159 bits (403), Expect = 4e-44
 Identities = 70/339 (20%), Positives = 131/339 (38%), Gaps = 80/339 (23%)

Query: 79  FRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           F + + L   +G G    V  C      ++         YA  ++N + L   +   + E
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQE---------YAAMIINTKKL-SARDHQKLE 58

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFY 196
            E +I ++L HP +  L+          ++ +  +GG+L   +  +   + +S   A   
Sbjct: 59  REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHC 115

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASS 253
             ++L A+ + H +G+++R+LKPEN+L+ S      + L+D                   
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLAD------------------- 156

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                     FG + +++     + +           F GT  Y
Sbjct: 157 --------------------------FGLAIEVEG--EQQAWF---------GFAGTPGY 179

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           +SPEV     +G  VD WA G+ +Y ++ G  PF         + I      FP+    +
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT 239

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           ++   A+DLI+ +L  +P  R+     AA+   HP+   
Sbjct: 240 VTP-EAKDLINKMLTINPSKRI----TAAEALKHPWISH 273

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  155 bits (393), Expect = 5e-44
 Identities = 88/355 (24%), Positives = 132/355 (37%), Gaps = 102/355 (28%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM----- 138
           L   IG G  G V L      Y ++        YAMKV++K+ L ++    R        
Sbjct: 17  LKDEIGKGSYGVVKLA-----YNENDNTY----YAMKVLSKKKLIRQAGFPRRPPPRGTR 67

Query: 139 ------------------EKKILKMLDHPFLPTLYAEFEASNFSCI--VMEFCSGGDLHS 178
                             E  ILK LDHP +  L    +  N   +  V E  + G +  
Sbjct: 68  PAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME 127

Query: 179 LRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +      K  S   ARFY  +++  +EYLH   II+RD+KP N+LV  DGHI ++DF +S
Sbjct: 128 VPT---LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184

Query: 239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP 298
                                                L+   G+       P   F+A  
Sbjct: 185 ----------------------------NEFKGSDALLSNTVGT-------PA--FMA-- 205

Query: 299 VAARSCSFVGTHEYVSPEVASGGS---HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
                           PE  S       G A+D WA G+ +Y  ++G+ PF         
Sbjct: 206 ----------------PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249

Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             I  + L FP Q   +      +DLI+ +L+K+P +R+       ++K HP+  
Sbjct: 250 SKIKSQALEFPDQPDIAED---LKDLITRMLDKNPESRI----VVPEIKLHPWVT 297

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  155 bits (392), Expect = 6e-43
 Identities = 59/357 (16%), Positives = 108/357 (30%), Gaps = 106/357 (29%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            + L   +G G    V+         +  G      +A+KV N     +   V   E E 
Sbjct: 10  LWLLSDILGQGATANVFRG-----RHKKTGDL----FAIKVFNNISFLRPVDVQMREFE- 59

Query: 141 KILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
            +LK L+H  +  L+A  E   +    ++MEFC  G L++ L           +      
Sbjct: 60  -VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRS----DGHIMLSDFDLSLCSNAIPAVESPASS 253
            +V+  + +L   GI++R++KP N++            L+DF  +               
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA--------------- 163

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                        ++  +L                   GT EY+
Sbjct: 164 -----------------------RELEDDEQFVSL------------------YGTEEYL 182

Query: 314 SPEVASGG--------SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK---- 361
            P++             +G  VD W+ G+  Y    G  PF         + ++ K    
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242

Query: 362 ---------------PLTFPTQSP-----SSMSEYHARDLISGLLNKDPCNRLGSKR 398
                          P+ +    P     S   +     +++ +L  D     G  +
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ 299

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  153 bits (388), Expect = 6e-43
 Identities = 73/371 (19%), Positives = 123/371 (33%), Gaps = 92/371 (24%)

Query: 74  KTGLTFRDFDLHRR-IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           K      D+ L ++ +G G  G V  C   ++    +        A+K++         K
Sbjct: 22  KKYAVTDDYQLSKQVLGLGVNGKVLECF--HRRTGQK-------CALKLLYD-----SPK 67

Query: 133 VHRAEMEKKILKML-DHPFLPTLYAEFEASNFSC----IVMEFCSGGDLHSLRHKQPHKR 187
             +   E          P +  +   +E  +       I+ME   GG+L S   ++  + 
Sbjct: 68  ARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA 124

Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAI 244
           F+   A     ++  A+++LH   I +RD+KPEN+L  S   D  + L+DF  +      
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA------ 178

Query: 245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC 304
                                            +      +QT                 
Sbjct: 179 ---------------------------------KETTQNALQT----------------- 188

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVK 360
               T  YV+PEV     +  + D W+ G+ +Y ++ G  PF + + +       R I  
Sbjct: 189 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL 420
               FP    S +SE  A+ LI  LL  DP  RL           HP+           L
Sbjct: 248 GQYGFPNPEWSEVSE-DAKQLIRLLLKTDPTERL----TITQFMNHPWINQSMVVPQTPL 302

Query: 421 TPPEIPGMRRQ 431
               +    + 
Sbjct: 303 HTARVLQEDKD 313

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  152 bits (386), Expect = 6e-43
 Identities = 76/362 (20%), Positives = 129/362 (35%), Gaps = 84/362 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----KKKVHRAE 137
           + +   +G G  G V           +         A+K++ K+ L +    +  V +  
Sbjct: 7   YLMGDLLGEGSYGKVKEV-----LDSETLCR----RAVKILKKKKLRRIPNGEANVKK-- 55

Query: 138 MEKKILKMLDHPFLPTLY--AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            E ++L+ L H  +  L      E      +VME+C  G +  +    P KRF +  A  
Sbjct: 56  -EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHG 113

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y  +++  LEYLH  GI+++D+KP N+L+ + G + +S   +                  
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV------------------ 155

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                            +  L+ F      +T               S    G+  +  P
Sbjct: 156 -----------------AEALHPFAADDTCRT---------------SQ---GSPAFQPP 180

Query: 316 EVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           E+A+G     G  VD W+ G+ +Y +  G  PF   +      NI K         P   
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI----PGDC 236

Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF-KGLNFALIRSLTPPEIPGMRRQK 432
                 DL+ G+L  +P  R         ++ H +F K    A      PP      R +
Sbjct: 237 GP-PLSDLLKGMLEYEPAKRF----SIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWR 291

Query: 433 TM 434
           +M
Sbjct: 292 SM 293

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  150 bits (381), Expect = 5e-42
 Identities = 51/334 (15%), Positives = 104/334 (31%), Gaps = 55/334 (16%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R+     ++    I   +   L     + +          +  +   L     +    ++
Sbjct: 53  REVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWP-LSSPSPMDAPSVK 111

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
            + +                   +  I M+ C   +L   +  +   +            
Sbjct: 112 IRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI 171

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++  A+E+LH  G+++RDLKP N+    D  + + DF L                     
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL--------------------- 210

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                      T +             Q      +    P  A     VGT  Y+SPE  
Sbjct: 211 ----------VTAMD------------QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI 248

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
            G ++ + VD ++ G+ ++E++Y    F+       +   V+    FP        +   
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNL-KFPLLFTQKYPQ--E 302

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             ++  +L+  P  R      A D+  +  F+ L
Sbjct: 303 HMMVQDMLSPSPTERP----EATDIIENAIFENL 332

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  149 bits (378), Expect = 6e-42
 Identities = 52/335 (15%), Positives = 104/335 (31%), Gaps = 65/335 (19%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            +F    +IG+G+ G+V+ C      R D      C+YA+K   K +     +   A  E
Sbjct: 11  TEFHELEKIGSGEFGSVFKC----VKRLDG-----CIYAIKRSKKPLAGSVDE-QNALRE 60

Query: 140 KKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFY 196
                 +  H  +   ++ +   +   I  E+C+GG L      + +    F     +  
Sbjct: 61  VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 120

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             +V   L Y+H + +++ D+KP N+ +        +  +      A   V         
Sbjct: 121 LLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV--------- 171

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                         ++        G     +                    G   +++ E
Sbjct: 172 ------------MFKIGD-----LGHVTRISSPQ--------------VEEGDSRFLANE 200

Query: 317 VASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
           V     +H    D +A  + +            P N      I +       + P  +S+
Sbjct: 201 VLQENYTHLPKADIFALALTVVCAAGAEPL---PRNGDQWHEIRQGR---LPRIPQVLSQ 254

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
               +L+  +++ DP  R      A  +  H    
Sbjct: 255 -EFTELLKVMIHPDPERRP----SAMALVKHSVLL 284

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  150 bits (380), Expect = 7e-42
 Identities = 80/348 (22%), Positives = 122/348 (35%), Gaps = 91/348 (26%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML- 146
           +G G    V  C   N             YA+K++ K+    + +V R   E ++L    
Sbjct: 21  LGEGAHARVQTCI--NLITSQE-------YAVKIIEKQPGHIRSRVFR---EVEMLYQCQ 68

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
            H  +  L   FE  +   +V E   GG +  L H    + F+   A     +V  AL++
Sbjct: 69  GHRNVLELIEFFEEEDRFYLVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALDF 126

Query: 207 LHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           LH  GI +RDLKPEN+L         + + DFDL                          
Sbjct: 127 LHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG------------------------- 161

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV-----A 318
                     +           + LTP                 G+ EY++PEV      
Sbjct: 162 -------SGIKLNGDCSPISTPELLTP----------------CGSAEYMAPEVVEAFSE 198

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT---------------LRNIVKKPL 363
               +    D W+ G+ +Y ++ G  PF                         +I +   
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY 258

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
            FP +  + +S   A+DLIS LL +D   RL     AA V  HP+ +G
Sbjct: 259 EFPDKDWAHISC-AAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  152 bits (385), Expect = 8e-42
 Identities = 79/426 (18%), Positives = 134/426 (31%), Gaps = 90/426 (21%)

Query: 21  ANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFR 80
           +NS   S            + PT           P     F    ++S    +K  +   
Sbjct: 3   SNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDD 62

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
                + +G G  G V      NK  Q++       +A+K+     L+   K  R   E 
Sbjct: 63  YKVTSQVLGLGINGKVLQIF--NKRTQEK-------FALKM-----LQDCPKARR---EV 105

Query: 141 KILKML-DHPFLPTLYAEFE----ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           ++       P +  +   +E          IVME   GG+L S    +  + F+   A  
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 165

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPAS 252
               +  A++YLH + I +RD+KPEN+L  S   +  + L+DF                 
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG---------------- 209

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                               ++          + T                     T  Y
Sbjct: 210 -------------------FAKE---TTSHNSLTT------------------PCYTPYY 229

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQ 368
           V+PEV     +  + D W+ G+ +Y ++ G  PF +             I      FP  
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289

Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGM 428
             S +SE   + LI  LL  +P  R+       +   HP+           L    +   
Sbjct: 290 EWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPWIMQSTKVPQTPLHTSRVLKE 344

Query: 429 RRQKTM 434
            +++  
Sbjct: 345 DKERWE 350

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  148 bits (377), Expect = 2e-41
 Identities = 77/372 (20%), Positives = 133/372 (35%), Gaps = 88/372 (23%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           ++ L + IG G+   V L           G E     A+K+++K  L     + +   E 
Sbjct: 16  NYRLLKTIGKGNFAKVKLA-----RHILTGRE----VAIKIIDKTQL-NPTSLQKLFREV 65

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           +I+K+L+HP +  L+   E      ++ME+ SGG++    +   H R     AR    ++
Sbjct: 66  RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFRQI 123

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           + A++Y H   I++RDLK EN+L+ +D +I ++DF  S                      
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---------------------- 161

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                           N F    K+                  C   G   Y +PE+  G
Sbjct: 162 ----------------NEFTVGGKLDA---------------FC---GAPPYAAPELFQG 187

Query: 321 -GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
               G  VD W+ G+ +Y ++ G  PF   + +     +++         P  MS     
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI----PFYMST-DCE 242

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFK-GLNFALIRSLTPPEIPGMRRQKTMPFPD 438
           +L+   L  +P  R         +    +   G     ++    PE+            D
Sbjct: 243 NLLKRFLVLNPIKRG----TLEQIMKDRWINAGHEEDELKPFVEPEL---------DISD 289

Query: 439 QKIKSQSTAFDY 450
           QK         Y
Sbjct: 290 QKRIDIMVGMGY 301

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  149 bits (378), Expect = 1e-40
 Identities = 70/342 (20%), Positives = 108/342 (31%), Gaps = 88/342 (25%)

Query: 81  DFDLHRRIGAGDIGTVYL-CSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            F     +G G  GT+      +N+             A+K +  E          A+ E
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNR-----------DVAVKRILPECFSF------ADRE 67

Query: 140 KKILKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            ++L+  D HP +   +   +   F  I +E C    L     +Q               
Sbjct: 68  VQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQE-YVEQKDFAHLGLEPITLLQ 125

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGH-----IMLSDFDLSLCSNAIPAVESPASS 253
           +    L +LH L I++RDLKP N+L+           M+SDF                  
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF------------------ 167

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                             L + L     S   ++                    GT  ++
Sbjct: 168 -----------------GLCKKLAVGRHSFSRRS-----------------GVPGTEGWI 193

Query: 314 SPEVASGGSHGN---AVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
           +PE+ S     N    VD ++ G   Y +I  G  PF          NI+    +     
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGACSLDCLH 251

Query: 370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
           P    +  AR+LI  ++  DP  R      A  V  HPFF  
Sbjct: 252 PEKHEDVIARELIEKMIAMDPQKRP----SAKHVLKHPFFWS 289

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  144 bits (366), Expect = 2e-40
 Identities = 72/346 (20%), Positives = 128/346 (36%), Gaps = 82/346 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEMEK 140
           +DL + +G G  G V L        +          A+K+V+ +  ++  + + +   E 
Sbjct: 9   WDLVQTLGEGAYGEVQLA-----VNRVTEEA----VAVKIVDMKRAVDCPENIKK---EI 56

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 57  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQL 114

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     R
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------------------TVFR 156

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                        R LN+  G+                             YV+PE+   
Sbjct: 157 YN--------NRERLLNKMCGT-------LP--------------------YVAPELLKR 181

Query: 321 -GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHA 378
              H   VD W+ GI +  M+ G  P+  PS+      +  +K           +     
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN--PWKKIDS-AP 238

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFF-KGLNFALIRSLTPP 423
             L+  +L ++P  R+       D+K   ++ K L     +    P
Sbjct: 239 LALLHKILVENPSARI----TIPDIKKDRWYNKPLK----KGAKRP 276

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  152 bits (384), Expect = 2e-40
 Identities = 74/370 (20%), Positives = 124/370 (33%), Gaps = 102/370 (27%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +++  R+G G  G V          QD G +     A+K   +E+  K ++  R  +E 
Sbjct: 15  PWEMKERLGTGGFGYVLRW-----IHQDTGEQ----VAIKQCRQELSPKNRE--RWCLEI 63

Query: 141 KILKMLDHPFLPTLYAEFE------ASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSA 193
           +I+K L+HP + +     +       ++   + ME+C GGDL   L   +          
Sbjct: 64  QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSNAIPAVESP 250
           R   +++  AL YLH   II+RDLKPEN++++         + D                
Sbjct: 124 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIID---------------- 167

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                         G +K+   L    L            FVGT
Sbjct: 168 -----------------------------LGYAKE---LDQGELCT---------EFVGT 186

Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK-------- 361
            +Y++PE+     +   VD+W+FG   +E I G  PF            V++        
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246

Query: 362 ------PLTFPTQSP-----SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                  + F +  P     S +        +  +L      R               F+
Sbjct: 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRG----TDPQNPNVGCFQ 302

Query: 411 GLNFALIRSL 420
            L+  L   L
Sbjct: 303 ALDSILSLKL 312

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  144 bits (365), Expect = 4e-40
 Identities = 79/340 (23%), Positives = 132/340 (38%), Gaps = 77/340 (22%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
                +    + L   +G G  G V +        Q  GH+     A+K++N++ +    
Sbjct: 3   KHDGRVKIGHYVLGDTLGVGTFGKVKIG-----EHQLTGHK----VAVKILNRQKIRSLD 53

Query: 132 KVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
            V + + E + LK+  HP +  LY          +VME+ SGG+L    +   H R    
Sbjct: 54  VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD--YICKHGRVEEM 111

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
            AR    ++L A++Y H   +++RDLKPENVL+ +  +  ++DF LS             
Sbjct: 112 EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS------------- 158

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                    N     + ++T               SC   G+  
Sbjct: 159 -------------------------NMMSDGEFLRT---------------SC---GSPN 175

Query: 312 YVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
           Y +PEV SG    G  VD W+ G+ +Y ++ G  PF    ++  +  + KK        P
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF----DDEHVPTLFKKIRGGVFYIP 231

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             ++      L+  +L  DP  R        D++ H +FK
Sbjct: 232 EYLNR-SVATLLMHMLQVDPLKRA----TIKDIREHEWFK 266

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  143 bits (363), Expect = 2e-39
 Identities = 72/347 (20%), Positives = 127/347 (36%), Gaps = 78/347 (22%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKE-VLEKKKKVHRAEMEK 140
           +DL + +G G  G V L        +          A+K+V+ +  ++  + + +   E 
Sbjct: 9   WDLVQTLGEGAYGEVQLA-----VNRVTEEA----VAVKIVDMKRAVDCPENIKK---EI 56

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L      +P        A+ +  ++
Sbjct: 57  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQL 114

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                     R
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------------------TVFR 156

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                        R LN+  G+                             YV+PE+   
Sbjct: 157 YN--------NRERLLNKMCGT-------LP--------------------YVAPELLKR 181

Query: 321 -GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHA 378
              H   VD W+ GI +  M+ G  P+  PS+      +  +K           +     
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN--PWKKIDS-AP 238

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFF-KGLNFALIRSLTPPE 424
             L+  +L ++P  R+       D+K   ++ K L     R      
Sbjct: 239 LALLHKILVENPSARI----TIPDIKKDRWYNKPLKKGAKRPRVTSG 281

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  142 bits (359), Expect = 1e-38
 Identities = 74/390 (18%), Positives = 116/390 (29%), Gaps = 79/390 (20%)

Query: 23  SSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDF 82
           S S+SS    S + L+    +  +  + L  +   +     +                  
Sbjct: 2   SGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYRE-EVHWM 60

Query: 83  DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI 142
               R+G G  G V+    +       G       A+K V  EV   +        E   
Sbjct: 61  THQPRVGRGSFGEVHRM-KDK----QTGF----QCAVKKVRLEVFRVE--------ELVA 103

Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
              L  P +  LY       +  I ME   GG L  L   +         A +Y  + L 
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALE 161

Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
            LEYLH   I++ D+K +NVL+ SDG    L D                           
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCD--------------------------- 194

Query: 262 QTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                             FG +  +Q     +               GT  +++PEV  G
Sbjct: 195 ------------------FGHALCLQPDGLGK------SLLTGDYIPGTETHMAPEVVMG 230

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
                 VD W+    +  M+ G  P+           I  +P     + P S +      
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAP-LTAQ 288

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            I   L K+P +R      A +++      
Sbjct: 289 AIQEGLRKEPVHRA----SAMELRRKVGKA 314

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  138 bits (349), Expect = 2e-37
 Identities = 68/346 (19%), Positives = 120/346 (34%), Gaps = 89/346 (25%)

Query: 72  GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK 131
               G   + +     +G+G  G V+         +++  E      +K + KE + +  
Sbjct: 16  AACEGEYSQKYSTMSPLGSGAFGFVWTA-----VDKEKNKE----VVVKFIKKEKVLEDC 66

Query: 132 KVHRAEMEK-----KILKMLDHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPH 185
            +   ++ K      IL  ++H  +  +   FE   F  +VME   SG DL +      H
Sbjct: 67  WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFA--FIDRH 124

Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
            R     A +   +++ A+ YL +  II+RD+K EN+++  D  I L DF  +       
Sbjct: 125 PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA------- 177

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                             Y  +      +    F G+                       
Sbjct: 178 -----------------AYLER-----GKLFYTFCGT-------IE-------------- 194

Query: 306 FVGTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
                 Y +PEV  G    G  ++ W+ G+ +Y +++   PF        L   V+  + 
Sbjct: 195 ------YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIH 242

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                P  +S+     L+SGLL   P  R         + T P+  
Sbjct: 243 P----PYLVSK-ELMSLVSGLLQPVPERRT----TLEKLVTDPWVT 279

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  139 bits (353), Expect = 4e-37
 Identities = 69/359 (19%), Positives = 113/359 (31%), Gaps = 103/359 (28%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
               + +G G  GTV             G       A+K +  +          A ME K
Sbjct: 17  VVSEKILGYGSSGTVVFQ----------GSFQGRPVAVKRMLID------FCDIALMEIK 60

Query: 142 ILKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-----RHKQPHKRFSLTSARF 195
           +L   D HP +   Y       F  I +E C   +L  L        +  K     +   
Sbjct: 61  LLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPIS 119

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS-------------DGHIMLSDFDLSLCSN 242
              ++   + +LH L II+RDLKP+N+LV +             +  I++SDF L     
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL----- 174

Query: 243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
                                                   KK+      +          
Sbjct: 175 ---------------------------------------CKKLD---SGQ----SSFRTN 188

Query: 303 SCSFVGTHEYVSPEVASGGSH-------GNAVDWWAFGIFIYEMI-YGRTPFAAPSNETT 354
             +  GT  + +PE+    ++         ++D ++ G   Y ++  G+ PF      + 
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSR 246

Query: 355 LRNIVKKPLTFPTQSPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
             NI++   +               A DLIS +++ DP  R      A  V  HP F  
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP----TAMKVLRHPLFWP 301

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  134 bits (340), Expect = 4e-36
 Identities = 80/330 (24%), Positives = 135/330 (40%), Gaps = 78/330 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           + +   +G G  G V L             +     A+K +++++L+K     R E E  
Sbjct: 11  YIIRETLGEGSFGKVKLA-----THYKTQQK----VALKFISRQLLKKSDMHMRVEREIS 61

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
            LK+L HP +  LY          +V+E+  GG+L    +    KR +    R +  +++
Sbjct: 62  YLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFD--YIVEKKRMTEDEGRRFFQQII 118

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS 261
            A+EY H   I++RDLKPEN+L+  + ++ ++DF LS        + +  +         
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS-------NIMTDGN--------- 162

Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG- 320
                        FL    GS       PN                    Y +PEV +G 
Sbjct: 163 -------------FLKTSCGS-------PN--------------------YAAPEVINGK 182

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
              G  VD W+ GI +Y M+ GR PF    ++  + N+ KK  +     P  +S   A+ 
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCVYVMPDFLSP-GAQS 237

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           LI  ++  DP  R+       +++  P+F 
Sbjct: 238 LIRRMIVADPMQRI----TIQEIRRDPWFN 263

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  134 bits (340), Expect = 5e-36
 Identities = 62/331 (18%), Positives = 103/331 (31%), Gaps = 80/331 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
               + R +  G    VY      +            YA+K +     EK + + +   E
Sbjct: 28  LRLRVRRVLAEGGFAFVYEA----QDVGSGRE-----YALKRLLSNEEEKNRAIIQ---E 75

Query: 140 KKILKML-DHPFLPTLYAEFEASNFS--------CIVMEFCSGGDLHSLRHKQPHKRFSL 190
              +K L  HP +    +                 ++ E C G  +  L+  +     S 
Sbjct: 76  VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135

Query: 191 TSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
            +      +   A++++H     II+RDLK EN+L+ + G I L D              
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD-------------- 181

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS--CSF 306
                                          FGS    +  P+  + A+  A      + 
Sbjct: 182 -------------------------------FGSATTISHYPDYSWSAQRRALVEEEITR 210

Query: 307 VGTHEYVSPEV---ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
             T  Y +PE+    S    G   D WA G  +Y + + + PF     +     IV    
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKY 266

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
           + P              LI  +L  +P  RL
Sbjct: 267 SIPPHDTQYTV---FHSLIRAMLQVNPEERL 294

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  136 bits (345), Expect = 9e-36
 Identities = 82/379 (21%), Positives = 141/379 (37%), Gaps = 84/379 (22%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
               +    + L   +G G  G V +        +  GH+     A+K++N++ +     
Sbjct: 9   HDGRVKIGHYILGDTLGVGTFGKVKVG-----KHELTGHK----VAVKILNRQKIRSLDV 59

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
           V +   E + LK+  HP +  LY      +   +VME+ SGG+L    +   + R     
Sbjct: 60  VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD--YICKNGRLDEKE 117

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           +R    ++L  ++Y H   +++RDLKPENVL+ +  +  ++DF LS        + S   
Sbjct: 118 SRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-------NMMSDGE 170

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                 FL    GS       PN                    Y
Sbjct: 171 ----------------------FLRTSCGS-------PN--------------------Y 181

Query: 313 VSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
            +PEV SG    G  VD W+ G+ +Y ++ G  PF    ++  +  + KK       +P 
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF----DDDHVPTLFKKICDGIFYTPQ 237

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
            ++      L+  +L  DP  R        D++ H +FK       + L     P     
Sbjct: 238 YLNP-SVISLLKHMLQVDPMKRA----TIKDIREHEWFK-------QDLPKYLFPEDPSY 285

Query: 432 KTMPFPDQKIKSQSTAFDY 450
            +    D+ +K     F+ 
Sbjct: 286 SSTMIDDEALKEVCEKFEC 304

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  131 bits (331), Expect = 4e-35
 Identities = 72/329 (21%), Positives = 109/329 (33%), Gaps = 81/329 (24%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G  G VY    +               A+K +        +       E  + K L 
Sbjct: 30  LGKGTYGIVYAG-RDL----SNQV----RIAIKEIP---ERDSRYSQPLHEEIALHKHLK 77

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA--RFYAAEVLVALE 205
           H  +      F  + F  I ME   GG L +L  +              FY  ++L  L+
Sbjct: 78  HKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL-LRSKWGPLKDNEQTIGFYTKQILEGLK 136

Query: 206 YLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTY 264
           YLH   I++RD+K +NVL+ +  G + +SDF                             
Sbjct: 137 YLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT--------------------------- 169

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-- 322
                            SK++  + P              +F GT +Y++PE+   G   
Sbjct: 170 -----------------SKRLAGINPCTE-----------TFTGTLQYMAPEIIDKGPRG 201

Query: 323 HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDL 381
           +G A D W+ G  I EM  G+ PF         +  +    +      P SMS   A+  
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI--PESMSA-EAKAF 258

Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           I      DP  R      A D+    F K
Sbjct: 259 ILKCFEPDPDKRA----CANDLLVDEFLK 283

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  129 bits (327), Expect = 1e-34
 Identities = 62/338 (18%), Positives = 113/338 (33%), Gaps = 83/338 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R       IG G   TVY          +   E     A   +    L  K +  R + E
Sbjct: 26  RFLKFDIEIGRGSFKTVYKG-----LDTETTVE----VAWCELQDRKL-TKSERQRFKEE 75

Query: 140 KKILKMLDHP----FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            ++LK L HP    F  +  +  +      +V E  + G L +   +   K   +   R 
Sbjct: 76  AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRS 133

Query: 196 YAAEVLVALEYLH--MLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           +  ++L  L++LH     II+RDLK +N+ +    G + + D                  
Sbjct: 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD------------------ 175

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                       G   ++  +  +            + +GT E+
Sbjct: 176 ---------------------------LGLATLKRASFAK------------AVIGTPEF 196

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           ++PE+     +  +VD +AFG+ + EM     P++   N   +   V      P      
Sbjct: 197 MAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-VKPASFDKV 254

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                 +++I G + ++   R        D+  H FF+
Sbjct: 255 AIP-EVKEIIEGCIRQNKDERY----SIKDLLNHAFFQ 287

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  123 bits (311), Expect = 3e-32
 Identities = 79/348 (22%), Positives = 123/348 (35%), Gaps = 89/348 (25%)

Query: 81  DFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           D++L   IG+G    V    C+   +             A+K +N E  +        E+
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKE-----------KVAIKRINLEKCQTSMDELLKEI 64

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH--KQPHKRFSLTSARF- 195
             + +    HP + + Y  F   +   +VM+  SGG   S+    K    +    S    
Sbjct: 65  --QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG---SVLDIIKHIVAKGEHKSGVLD 119

Query: 196 --YAA----EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
               A    EVL  LEYLH  G I+RD+K  N+L+  DG + ++DF              
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFG------------- 166

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                              S  L+   +      +                    +FVGT
Sbjct: 167 ------------------VSAFLATGGDITRNKVRK-------------------TFVGT 189

Query: 310 HEYVSPEV-ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTF 365
             +++PEV      +    D W+FGI   E+  G  P+        L   ++     L  
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249

Query: 366 PTQSPSSMSEY--HARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFK 410
             Q    + +Y    R +IS  L KDP      KR  AA++  H FF+
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDP-----EKRPTAAELLRHKFFQ 292

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  123 bits (310), Expect = 3e-31
 Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 20/197 (10%)

Query: 50  NLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDR 109
            ++L   R+  F +  +              ++ + + +G+G  G V L      + +  
Sbjct: 105 EIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLA-----FERKT 159

Query: 110 GHEPCCLYAMKVVNKEVL-----EKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS 164
             +     A+++++K         +       E E +ILK L+HP +  +   F+A ++ 
Sbjct: 160 CKK----VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY- 214

Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
            IV+E   GG+L   +    +KR    + + Y  ++L+A++YLH  GII+RDLKPENVL+
Sbjct: 215 YIVLELMEGGELFD-KVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 272

Query: 225 RS---DGHIMLSDFDLS 238
            S   D  I ++DF  S
Sbjct: 273 SSQEEDCLIKITDFGHS 289

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 75.9 bits (187), Expect = 4e-15
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 306 FVGTHEYVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK- 361
             GT  Y++PEV        +  AVD W+ G+ ++  + G  PF+    + +L++ +   
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
              F  +  + +SE  A DL+  LL  DP  R        +   HP+ + 
Sbjct: 361 KYNFIPEVWAEVSE-KALDLVKKLLVVDPKARF----TTEEALRHPWLQD 405

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  120 bits (302), Expect = 1e-30
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 17/168 (10%)

Query: 79  FRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           F D ++L   IG G    V  C       ++ G +    +A+K+V+         +   +
Sbjct: 22  FEDVYELCEVIGKGPFSVVRRCI-----NRETGQQ----FAVKIVDVAKFTSSPGLSTED 72

Query: 138 MEK--KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSA 193
           +++   I  ML HP +  L   + +     +V EF  G DL    ++       +S   A
Sbjct: 73  LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
             Y  ++L AL Y H   II+RD+KP  VL+ S      + L  F ++
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
            VGT  +++PEV     +G  VD W  G+ ++ ++ G  PF   + E     I+K     
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKM 251

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
             +  S +SE  A+DL+  +L  DP  R+       +   HP+ K  +    +   P  +
Sbjct: 252 NPRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLKERDRYAYKIHLPETV 306

Query: 426 PGMRRQKTM 434
             +R+    
Sbjct: 307 EQLRKFNAR 315

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  116 bits (292), Expect = 2e-29
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 21/169 (12%)

Query: 79  FRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-----EKKKK 132
            RD + + + +G+G  G V L      + +    +     A+K+++K         +   
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLA-----FERKTCKK----VAIKIISKRKFAIGSAREADP 58

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
               E E +ILK L+HP +  +   F+A ++  IV+E   GG+L   +    +KR    +
Sbjct: 59  ALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD-KVVG-NKRLKEAT 115

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
            + Y  ++L+A++YLH  GII+RDLKPENVL+ S   D  I ++DF  S
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 15/146 (10%)

Query: 306 FVGTHEYVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL-RNIVKK 361
             GT  Y++PEV        +  AVD W+ G+ ++  + G  PF+    + +L   I   
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLT 421
              F  +  + +SE  A DL+  LL  DP  R        +   HP+ +         + 
Sbjct: 236 KYNFIPEVWAEVSE-KALDLVKKLLVVDPKARF----TTEEALRHPWLQD------EDMK 284

Query: 422 PPEIPGMRRQKTMPFPDQKIKSQSTA 447
                 +  +       Q +   ST+
Sbjct: 285 RKFQDLLSEENESTALPQVLAQPSTS 310

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  114 bits (286), Expect = 3e-28
 Identities = 66/415 (15%), Positives = 115/415 (27%), Gaps = 115/415 (27%)

Query: 81  DFDLHRRIGAG--DIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
            ++L   IG G  D+ TV         +              ++ +N   LE        
Sbjct: 26  CYELLTVIGKGFEDLMTVNLARYKPTGE-----------YVTVRRIN---LEACSNEMVT 71

Query: 137 EMEK--KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
            ++    + K+ +HP +    A F A N   +V  F + G    L         +  +  
Sbjct: 72  FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA 131

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
           +    VL AL+Y+H +G ++R +K  ++L+  DG + LS                   S 
Sbjct: 132 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGL-------------RSNLSM 178

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
            +   R +                                    V       V    ++S
Sbjct: 179 ISHGQRQRV-----------------------------------VHDFPKYSVKVLPWLS 203

Query: 315 PEVASGGSHG--NAVDWWAFGIFIYEMIYGRTPFA---------------APSNETTLRN 357
           PEV      G     D ++ GI   E+  G  PF                 P    T   
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263

Query: 358 IVKKPLTFPTQSPSSMSEYHA--------------------------RDLISGLLNKDPC 391
             ++    P++S ++     +                             +   L ++P 
Sbjct: 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPD 323

Query: 392 NRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQST 446
            R      A+ +  H FFK +      +L     P            Q       
Sbjct: 324 ARP----SASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFG 374

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  113 bits (284), Expect = 4e-28
 Identities = 72/335 (21%), Positives = 112/335 (33%), Gaps = 83/335 (24%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +D  + IG+G+ G   L        +          A+K + +      + V R   E  
Sbjct: 22  YDFVKDIGSGNFGVARLM-----RDKLTKEL----VAVKYIERGAA-IDENVQR---EII 68

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
             + L HP +              I+ME+ SGG+L+         RFS   ARF+  ++L
Sbjct: 69  NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLL 126

Query: 202 VALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
             + Y H + I +RDLK EN L+       + + DF  S             S       
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHS------- 172

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                                G+       P   ++A  V  R        EY       
Sbjct: 173 ---------------QPKSTVGT-------PA--YIAPEVLLR-------QEYDGKIA-- 199

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL----TFPTQSPSSMSE 375
                   D W+ G+ +Y M+ G  PF  P      R  +++ L    + P     S   
Sbjct: 200 --------DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE- 250

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                LIS +   DP  R+       ++KTH +F 
Sbjct: 251 --CCHLISRIFVADPATRI----SIPEIKTHSWFL 279

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  112 bits (281), Expect = 5e-28
 Identities = 60/323 (18%), Positives = 115/323 (35%), Gaps = 89/323 (27%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           +++ ++   +G G  G V       K             A+K +  E   ++K       
Sbjct: 7   YKEIEVEEVVGRGAFGVVCKAKWRAKDV-----------AIKQIESE--SERKAFIV--- 50

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
           E + L  ++HP +  LY     +   C+VME+  GG L++ L   +P   ++   A  + 
Sbjct: 51  ELRQLSRVNHPNIVKLYG-ACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108

Query: 198 AEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIM-LSDFDLSLCSNAIPAVESPASS 253
            +    + YLH +    +I+RDLKP N+L+ + G ++ + DF                  
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT---------------- 152

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                              +  +           +T               +  G+  ++
Sbjct: 153 -------------------ACDIQ--------THMT---------------NNKGSAAWM 170

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA-APSNETTLRNIVKKPL--TFPTQSP 370
           +PEV  G ++    D +++GI ++E+I  R PF         +   V            P
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP 230

Query: 371 SSMSEYHARDLISGLLNKDPCNR 393
             +       L++   +KDP  R
Sbjct: 231 KPI-----ESLMTRCWSKDPSQR 248

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  110 bits (276), Expect = 3e-27
 Identities = 64/323 (19%), Positives = 110/323 (34%), Gaps = 83/323 (25%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRA 136
           + D ++  +IGAG  GTV+    +               A+K++ ++    E+  +  R 
Sbjct: 36  WCDLNIKEKIGAGSFGTVHRAEWHGS-----------DVAVKILMEQDFHAERVNEFLR- 83

Query: 137 EMEKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR 194
             E  I+K L HP +     A  +  N   IV E+ S G L+  L      ++       
Sbjct: 84  --EVAIMKRLRHPNIVLFMGAVTQPPNL-SIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140

Query: 195 FYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
             A +V   + YLH     I++R+LK  N+LV     + + DF LS              
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS-------------- 186

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                  R +  T   S                                   S  GT E+
Sbjct: 187 -------RLKASTFLSSK----------------------------------SAAGTPEW 205

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL--TFPTQSP 370
           ++PEV          D ++FG+ ++E+   + P+   +    +  +  K      P    
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN 265

Query: 371 SSMSEYHARDLISGLLNKDPCNR 393
             +       +I G    +P  R
Sbjct: 266 PQV-----AAIIEGCWTNEPWKR 283

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  109 bits (274), Expect = 4e-27
 Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 73/273 (26%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-EKKKKVHRAE 137
                + +RIG+G  GTVY      K+  D         A+K++N      ++ +  + E
Sbjct: 23  DGQITVGQRIGSGSFGTVYKG----KWHGD--------VAVKMLNVTAPTPQQLQAFKNE 70

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           +   +L+   H  +        A     IV ++C G  L+   H    K F +      A
Sbjct: 71  V--GVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIA 126

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            +    ++YLH   II+RDLK  N+ +  D  + + DF                      
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG--------------------- 165

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                         L+   +R+ GS + + L+                  G+  +++PEV
Sbjct: 166 --------------LATEKSRWSGSHQFEQLS------------------GSILWMAPEV 193

Query: 318 ASGGSHG---NAVDWWAFGIFIYEMIYGRTPFA 347
                        D +AFGI +YE++ G+ P++
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  107 bits (269), Expect = 2e-26
 Identities = 51/328 (15%), Positives = 96/328 (29%), Gaps = 85/328 (25%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKKKKVHRA 136
           F   ++   IG G  G VY      ++  +         A+++++ E    ++ K   R 
Sbjct: 32  FEQLEIGELIGKGRFGQVYHG----RWHGE--------VAIRLIDIERDNEDQLKAFKR- 78

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E    +   H  +        +     I+   C G  L+S+          +   R  
Sbjct: 79  --EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQI 135

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
           A E++  + YLH  GI+++DLK +NV    +G ++++DF                     
Sbjct: 136 AQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFG-------------------- 174

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                          L          ++   L                   G   +++PE
Sbjct: 175 ---------------LFSISGVLQAGRREDKLR---------------IQNGWLCHLAPE 204

Query: 317 V---------ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK--KPLTF 365
           +                   D +A G   YE+     PF     E  +  +    KP   
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS 264

Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNR 393
                  +      D++      +   R
Sbjct: 265 QIGMGKEI-----SDILLFCWAFEQEER 287

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  105 bits (263), Expect = 1e-25
 Identities = 47/268 (17%), Positives = 95/268 (35%), Gaps = 58/268 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM-- 138
           D      +G G  G     +                   +V+  + L +  +  +     
Sbjct: 11  DLIHGEVLGKGCFGQAIKVTHRETG--------------EVMVMKELIRFDEETQRTFLK 56

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E K+++ L+HP +               + E+  GG L  +       ++  +    +A 
Sbjct: 57  EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAK 115

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   + YLH + II+RDL   N LVR + +++++DF                       
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFG---------------------- 153

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                        L+R +         +T       + +P   +  + VG   +++PE+ 
Sbjct: 154 -------------LARLM------VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
           +G S+   VD ++FGI + E+I      
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  104 bits (261), Expect = 3e-25
 Identities = 65/311 (20%), Positives = 117/311 (37%), Gaps = 67/311 (21%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           +  ++G G + TVYL         +         A+K +     EK++ + R E E    
Sbjct: 15  IVDKLGGGGMSTVYLA---EDTILNI------KVAIKAIFIPPREKEETLKRFEREVHNS 65

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
             L H  + ++    E  +   +VME+  G  L        H   S+ +A  +  ++L  
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDG 123

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           +++ H + I++RD+KP+N+L+ S+  + + DF ++                 A S  S T
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK----------------ALSETSLT 167

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
            T                                         +GT +Y SPE A G + 
Sbjct: 168 QTN--------------------------------------HVLGTVQYFSPEQAKGEAT 189

Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDLI 382
               D ++ GI +YEM+ G  PF   +  +  +++I        T     + +    ++I
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ-SLSNVI 248

Query: 383 SGLLNKDPCNR 393
                KD  NR
Sbjct: 249 LRATEKDKANR 259

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  103 bits (259), Expect = 6e-25
 Identities = 67/318 (21%), Positives = 113/318 (35%), Gaps = 76/318 (23%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L   +G G +  V+L       R  R        A+KV+  ++        R   E +  
Sbjct: 16  LGEILGFGGMSEVHLA---RDLRDHR------DVAVKVLRADLARDPSFYLRFRREAQNA 66

Query: 144 KMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             L+HP +  +Y    AE  A     IVME+  G  L  + H       +   A    A+
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIAD 124

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
              AL + H  GII+RD+KP N+++ +   + + DF ++                 A + 
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA----------------RAIAD 168

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
              + T                                    ++ + +GT +Y+SPE A 
Sbjct: 169 SGNSVT------------------------------------QTAAVIGTAQYLSPEQAR 192

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSPSSMSE 375
           G S     D ++ G  +YE++ G  PF   S  +     +R     P        + +  
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL-- 250

Query: 376 YHARDLISGLLNKDPCNR 393
                ++   L K+P NR
Sbjct: 251 ---DAVVLKALAKNPENR 265

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  102 bits (256), Expect = 1e-24
 Identities = 54/333 (16%), Positives = 112/333 (33%), Gaps = 94/333 (28%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-- 136
             + +  ++IG G  G V+      +             A+K +     E + ++     
Sbjct: 18  DNEIEYEKQIGKGGFGLVHKG----RLV-KDKSV----VAIKSLILGDSEGETEMIEKFQ 68

Query: 137 --EMEKKILKMLDHPFLPTLYAEFEASNFS-CIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             + E  I+  L+HP +  LY      +    +VMEF   GDL+     + H     +  
Sbjct: 69  EFQREVFIMSNLNHPNIVKLYG---LMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVK 124

Query: 194 RFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDG-----HIMLSDFDLSLCSNAIPA 246
                ++ + +EY+      I++RDL+  N+ ++S          ++DF L         
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL--------- 175

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                     S+          + +++                 
Sbjct: 176 --------------------------SQQ--------SVHSVS---------------GL 186

Query: 307 VGTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFA--APSNETTLRNIVKKP 362
           +G  ++++PE        +    D ++F + +Y ++ G  PF   +      +  I ++ 
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246

Query: 363 L--TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           L  T P   P  +     R++I    + DP  R
Sbjct: 247 LRPTIPEDCPPRL-----RNVIELCWSGDPKKR 274

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  101 bits (253), Expect = 2e-24
 Identities = 45/333 (13%), Positives = 97/333 (29%), Gaps = 92/333 (27%)

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--EKK 130
           + +G+ F+  +   ++     G ++                     +KV+        K 
Sbjct: 3   KHSGIDFKQLNFLTKLNENHSGELWKGRWQGN-----------DIVVKVLKVRDWSTRKS 51

Query: 131 KKVHRAEMEKKILKMLDHPFLPTLYA---EFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
           +  +    E   L++  HP +  +        A +   ++  +   G L+++ H+  +  
Sbjct: 52  RDFNE---ECPRLRIFSHPNVLPVLGACQSPPAPHP-TLITHWMPYGSLYNVLHEGTNFV 107

Query: 188 FSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
              + A  +A ++   + +LH L   I    L   +V++  D    +S            
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISM----------- 156

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                                                K                      
Sbjct: 157 ----------------------------------ADVKFSFQSP---------------G 167

Query: 306 FVGTHEYVSPEVASGGSHGN---AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
            +    +V+PE            + D W+F + ++E++    PFA  SN      +  + 
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227

Query: 363 L--TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           L  T P      +       L+   +N+DP  R
Sbjct: 228 LRPTIPPGISPHV-----SKLMKICMNEDPAKR 255

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 99.3 bits (248), Expect = 1e-23
 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 26/177 (14%)

Query: 70  TFGRKTGLTFRDFDLHRR-IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE 128
               K      D+ +  + +G G  G V      NK  Q++       +A+K++     +
Sbjct: 7   GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIF--NKRTQEK-------FALKML-----Q 52

Query: 129 KKKKVHRAEMEKKIL-KMLDHPFLPTLYAEFE----ASNFSCIVMEFCSGGDLHSLRHKQ 183
              K  R   E ++  +    P +  +   +E          IVME   GG+L S    +
Sbjct: 53  DCPKARR---EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR 109

Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDL 237
             + F+   A      +  A++YLH + I +RD+KPEN+L  S   +  + L+DF  
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 65.0 bits (159), Expect = 7e-12
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 12/131 (9%)

Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSP 370
            E  +G  +  + D W+ G+ +Y ++ G  PF +             I      FP    
Sbjct: 168 KET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRR 430
           S +SE   + LI  LL  +P  R+       +   HP+           L    +  ++ 
Sbjct: 227 SEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPWIMQSTKVPQTPLHTSRV--LKE 279

Query: 431 QKTMPFPDQKI 441
            K      ++ 
Sbjct: 280 DKERWEDVKEE 290

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  100 bits (250), Expect = 3e-23
 Identities = 63/285 (22%), Positives = 103/285 (36%), Gaps = 36/285 (12%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R++G G   TV+L             +     AMKVV       +     A  E ++LK 
Sbjct: 43  RKLGWGHFSTVWLS---------WDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKS 89

Query: 146 L-----DHP---FLPTLYAEFEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
           +     + P    +  L  +F+ S       C+V E   G  L     K  ++   L   
Sbjct: 90  VRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCV 148

Query: 194 RFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
           +    +VL  L+YLH    II+ D+KPEN+L+  +        +  +   A  A E   S
Sbjct: 149 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN--------EQYIRRLAAEATEWQRS 200

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                S  + +     +            ++K++ +    L  A  V       + T +Y
Sbjct: 201 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLK-VKIADLGNACWVHKHFTEDIQTRQY 259

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
            S EV  G  +    D W+     +E+  G   F   S E   R+
Sbjct: 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRD 304

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 98.0 bits (245), Expect = 5e-23
 Identities = 81/369 (21%), Positives = 124/369 (33%), Gaps = 130/369 (35%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK------ 140
           ++G G  G VY      K +  +G     + A+K +            R + E       
Sbjct: 28  KVGEGTYGVVY------KAKDSQGR----IVALKRI------------RLDAEDEGIPST 65

Query: 141 -----KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                 +LK L HP + +L     +     +V EF    DL  +  +        +  + 
Sbjct: 66  AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENK-TGLQDSQIKI 123

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y  ++L  + + H   I++RDLKP+N+L+ SDG + L+DF L+                 
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA----------------- 166

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE---- 311
                                 R FG        P R +              THE    
Sbjct: 167 ----------------------RAFGI-------PVRSY--------------THEVVTL 183

Query: 312 -YVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK--------- 360
            Y +P+V  G      +VD W+ G    EMI G+  F   +++  L  I           
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243

Query: 361 ----------KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVK 404
                     K  TF        S           DL+S +L  DP  R+     A D  
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SARDAM 299

Query: 405 THPFFKGLN 413
            HP+FK L+
Sbjct: 300 NHPYFKDLD 308

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 96.8 bits (242), Expect = 9e-23
 Identities = 77/368 (20%), Positives = 114/368 (30%), Gaps = 129/368 (35%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK------ 140
           +IG G  G VY         Q+   E    +A+K +            R E E       
Sbjct: 9   KIGEGTYGVVYKA-------QNNYGE---TFALKKI------------RLEKEDEGIPST 46

Query: 141 -----KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                 ILK L H  +  LY          +V E     DL  L            +A+ 
Sbjct: 47  TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKS 104

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           +  ++L  + Y H   +++RDLKP+N+L+  +G + ++DF L+                 
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA----------------- 147

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE---- 311
                                 R FG        P R +              THE    
Sbjct: 148 ----------------------RAFGI-------PVRKY--------------THEIVTL 164

Query: 312 -YVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS---------------NETT 354
            Y +P+V  G       +D W+ G    EM+ G   F   S               N   
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224

Query: 355 LRNIVKKP---LTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKT 405
             N+ + P     F    P     +         DL+S +L  DP  R+     A     
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI----TAKQALE 280

Query: 406 HPFFKGLN 413
           H +FK  N
Sbjct: 281 HAYFKENN 288

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 96.8 bits (241), Expect = 2e-22
 Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 19/192 (9%)

Query: 46  SSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKY 105
              E L L   +         +    G    L   DF+    +GAG+ G V+  S     
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGE---LKDDDFEKISELGAGNGGVVFKVS----- 53

Query: 106 RQDRGHEPC-CLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFS 164
                H+P   + A K+++ E+    +   +   E ++L   + P++   Y  F +    
Sbjct: 54  -----HKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFYSDGEI 106

Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVL 223
            I ME   GG L  +  K    R         +  V+  L YL     I++RD+KP N+L
Sbjct: 107 SICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 164

Query: 224 VRSDGHIMLSDF 235
           V S G I L DF
Sbjct: 165 VNSRGEIKLCDF 176

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 22/86 (25%), Positives = 34/86 (39%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           SFVGT  Y+SPE   G  +    D W+ G+ + EM  GR P   P  +        +   
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDP 390
              ++P             G+ ++ P
Sbjct: 249 DAAETPPRPRTPGRPLNKFGMDSRPP 274

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 95.7 bits (239), Expect = 4e-22
 Identities = 61/337 (18%), Positives = 105/337 (31%), Gaps = 97/337 (28%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L H  + TL+          +V E+    DL            ++ + + +  
Sbjct: 50  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG-NIINMHNVKLFLF 107

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++L  L Y H   +++RDLKP+N+L+   G + L+DF L+                    
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA-------------------- 147

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE-----YV 313
                              R           P + +               +E     Y 
Sbjct: 148 -------------------RAKSI-------PTKTY--------------DNEVVTLWYR 167

Query: 314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------------ 360
            P++  G +     +D W  G   YEM  GR  F   + E  L  I +            
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227

Query: 361 -------KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHP 407
                  K   +P     ++  +         DL++ LL  +  NR+     A D   HP
Sbjct: 228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI----SAEDAMKHP 283

Query: 408 FFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQ 444
           FF  L   + +      I  ++  +       +    
Sbjct: 284 FFLSLGERIHKLPDTTSIFALKEIQLQKEASLRSAHH 320

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 95.1 bits (237), Expect = 6e-22
 Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 20/204 (9%)

Query: 43  TSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLN 102
                   L  +    +            G++       + +   +G+G  G+VY     
Sbjct: 6   HHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG--- 62

Query: 103 NKYRQDRGHEPCCLYAMKVVNKEVLEKKKKV---HRAEMEKKILKMLDHPFLP---TLYA 156
              R           A+K V K+ +    ++    R  ME  +LK +   F      L  
Sbjct: 63  --IRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF-SGVIRLLD 115

Query: 157 EFEASNFSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYR 215
            FE  +   +++E      DL                AR +  +VL A+ + H  G+++R
Sbjct: 116 WFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHR 173

Query: 216 DLKPENVLV-RSDGHIMLSDFDLS 238
           D+K EN+L+  + G + L DF   
Sbjct: 174 DIKDENILIDLNRGELKLIDFGSG 197

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 23/135 (17%)

Query: 306 FVGTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           F GT  Y  PE       HG +   W+ GI +Y+M+ G  PF           I++  + 
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVF 261

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
           F       +S    + LI   L   P +R        +++ HP+ +         L P E
Sbjct: 262 F----RQRVSS-ECQHLIRWCLALRPSDRP----TFEEIQNHPWMQD-------VLLPQE 305

Query: 425 IPGMRRQKTMPFPDQ 439
              +      P P +
Sbjct: 306 TAEIHLHSLSPGPSK 320

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 94.3 bits (235), Expect = 9e-22
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            F    +IG G  G V+   ++N+ ++        + A+K+++ E  E + +  + E+  
Sbjct: 23  LFTKLEKIGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEI-- 71

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L   D P++   Y  +       I+ME+  GG   S            T       E+
Sbjct: 72  TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG---SALDLLEPGPLDETQIATILREI 128

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           L  L+YLH    I+RD+K  NVL+   G + L+DF
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF 163

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +FVGT  +++PEV    ++ +  D W+ GI   E+  G  P    S    ++ +   P  
Sbjct: 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH---SELHPMKVLFLIPKN 234

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            P     + S+   ++ +   LNK+P  R      A ++  H F  
Sbjct: 235 NPPTLEGNYSK-PLKEFVEACLNKEPSFRP----TAKELLKHKFIL 275

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 92.8 bits (231), Expect = 3e-21
 Identities = 39/194 (20%), Positives = 72/194 (37%), Gaps = 20/194 (10%)

Query: 54  KPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEP 113
           KP +              G+       ++ L   +G G  GTV+       +R     + 
Sbjct: 5   KPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAG-----HRLTDRLQ- 58

Query: 114 CCLYAMKVVNKEVLEKKKKVH---RAEMEKKILKMLD----HPFLPTLYAEFEASNFSCI 166
               A+KV+ +  +     +       +E  +L  +     HP +  L   FE      +
Sbjct: 59  ---VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115

Query: 167 VMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
           V+E      DL    +           +R +  +V+ A+++ H  G+++RD+K EN+L+ 
Sbjct: 116 VLERPLPAQDL--FDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID 173

Query: 226 SD-GHIMLSDFDLS 238
              G   L DF   
Sbjct: 174 LRRGCAKLIDFGSG 187

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 16/106 (15%)

Query: 306 FVGTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           F GT  Y  PE  S    H      W+ GI +Y+M+ G  PF         + I++  L 
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELH 251

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           F    P+ +S      LI   L   P +R        ++   P+ +
Sbjct: 252 F----PAHVSP-DCCALIRRCLAPKPSSRP----SLEEILLDPWMQ 288

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 93.0 bits (232), Expect = 3e-21
 Identities = 66/333 (19%), Positives = 103/333 (30%), Gaps = 113/333 (33%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL----HSLRHKQPHKRFSLTSAR 194
           E  ++K L H  +  LY      N   +V EF    DL     S       +   L   +
Sbjct: 53  EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
           ++  ++L  L + H   I++RDLKP+N+L+   G + L DF L+                
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA---------------- 155

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE--- 311
                                  R FG        P   F              + E   
Sbjct: 156 -----------------------RAFGI-------PVNTF--------------SSEVVT 171

Query: 312 --YVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-------- 360
             Y +P+V  G      ++D W+ G  + EMI G+  F   ++E  L+ I          
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES 231

Query: 361 -----------KPLTFPTQSPSSMSEY-----------HARDLISGLLNKDPCNRLGSKR 398
                       P     + P  + +            +  D + GLL  +P  RL    
Sbjct: 232 LWPSVTKLPKYNP-NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL---- 286

Query: 399 GAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
            A     HP+F               + G R  
Sbjct: 287 SAKQALHHPWFAEYY-------HHASMGGSRSH 312

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 91.6 bits (228), Expect = 8e-21
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +++   +G G  G VY      K +         L A KV+  +  E+ +      +E +
Sbjct: 21  WEIVGELGDGAFGKVY------KAKNKETGA---LAAAKVIETKSEEELEDY---IVEIE 68

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           IL   DHP++  L   +       I++EFC GG + ++  +   +  +    +    ++L
Sbjct: 69  ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQML 127

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
            AL +LH   II+RDLK  NVL+  +G I L+DF
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF 161

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 19/115 (16%)

Query: 305 SFVGTHEYVSPEV-----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--- 356
           SF+GT  +++PEV          +    D W+ GI + EM     P         +R   
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLL 232

Query: 357 NIVKKPLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            I K     PT  +PS  S    RD +   L+K+P  R      AA +  HPF  
Sbjct: 233 KIAKSDP--PTLLTPSKWSV-EFRDFLKIALDKNPETRP----SAAQLLEHPFVS 280

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 91.7 bits (228), Expect = 9e-21
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D +    +G+G  G V+      K           + A+K + +   +++ K  R  M+ 
Sbjct: 26  DLENLGEMGSGTCGQVWKM-RFRKTGH--------VIAVKQMRRSGNKEENK--RILMDL 74

Query: 141 KIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            ++ K  D P++   +  F  +    I ME            K+                
Sbjct: 75  DVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAE--KLKKRMQGPIPERILGKMTVA 132

Query: 200 VLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDF 235
           ++ AL YL    G+I+RD+KP N+L+   G I L DF
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF 169

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 14/114 (12%)

Query: 304 CSFVGTHEYVSPEV-----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRN 357
               G   Y++PE       +   +    D W+ GI + E+  G+ P+     +   L  
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241

Query: 358 IVKK-PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           ++++ P   P     S      +  +   L KD   R         +  H F K
Sbjct: 242 VLQEEPPLLPGHMGFSGD---FQSFVKDCLTKDHRKRP----KYNKLLEHSFIK 288

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 90.5 bits (225), Expect = 1e-20
 Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 87/285 (30%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           RD  L   +G G  G V+  S   +                V  K    + +K    E E
Sbjct: 8   RDITLLECVGKGRYGEVWRGSWQGEN---------------VAVKIFSSRDEKSWFRETE 52

Query: 140 KKILKMLDHPFLPTLY-AEFEASNFS---CIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                ML H  +     ++  + + S    ++  +   G L+              S   
Sbjct: 53  LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLR 109

Query: 196 YAAEVLVALEYLHML--------GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV 247
               +   L +LH+          I +RDLK +N+LV+ +G   ++D  L++       +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-------M 162

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
            S +++        +                                            V
Sbjct: 163 HSQSTNQLDVGNNPR--------------------------------------------V 178

Query: 308 GTHEYVSPEVASGGSHGNA------VDWWAFGIFIYEMIYGRTPF 346
           GT  Y++PEV       +       VD WAFG+ ++E+       
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 90.8 bits (226), Expect = 2e-20
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 15/159 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D      IG G  G+V    ++    Q        + A+K +   V EK++K  +  M+ 
Sbjct: 23  DLKDLGEIGRGAYGSVNKM-VHKPSGQ--------IMAVKRIRSTVDEKEQK--QLLMDL 71

Query: 141 KI-LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARFYA 197
            + ++  D P++   Y          I ME  S      +   +                
Sbjct: 72  DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131

Query: 198 AEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDF 235
              + AL +L   L II+RD+KP N+L+   G+I L DF
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF 170

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 304 CSFVGTHEYVSPEVASGGSHGNA----VDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNI 358
               G   Y++PE     +         D W+ GI +YE+  GR P+   ++    L  +
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242

Query: 359 VKK-PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           VK  P           S     + ++  L KD   R        ++  HPF  
Sbjct: 243 VKGDPPQLSNSEEREFSP-SFINFVNLCLTKDESKRP----KYKELLKHPFIL 290

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 90.3 bits (225), Expect = 2e-20
 Identities = 62/308 (20%), Positives = 92/308 (29%), Gaps = 103/308 (33%)

Query: 139 EKKILKML---DHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
           E  +L+ L   +HP +  L      S         +V E     DL +   K P      
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 119

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
            + +    + L  L++LH   I++RDLKPEN+LV S G + L+DF L+            
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA------------ 167

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                                      R +            L               T 
Sbjct: 168 ---------------------------RIYSY-------QMAL---------------TP 178

Query: 311 E-----YVSPEVASGGSHGNAVDWWAFG-IFIYEMIYGRTPFAAPS-------------- 350
                 Y +PEV    ++   VD W+ G IF  EM   +  F   S              
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIF-AEMFRRKPLFCGNSEADQLGKIFDLIGL 237

Query: 351 -NETTLRNIVKKPL-TFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAAD 402
             E      V  P   FP + P  +             L+  +L  +P  R+     A  
Sbjct: 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI----SAFR 293

Query: 403 VKTHPFFK 410
              H +  
Sbjct: 294 ALQHSYLH 301

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 89.1 bits (222), Expect = 4e-20
 Identities = 58/306 (18%), Positives = 97/306 (31%), Gaps = 97/306 (31%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +LK L H  +  L+    +     +V EFC   DL                 + +  
Sbjct: 51  EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCN-GDLDPEIVKSFLF 108

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++L  L + H   +++RDLKP+N+L+  +G + L++F L+                    
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA-------------------- 148

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE-----YV 313
                              R FG        P R +              + E     Y 
Sbjct: 149 -------------------RAFGI-------PVRCY--------------SAEVVTLWYR 168

Query: 314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTP-FAAPS---------------NETTLR 356
            P+V  G      ++D W+ G    E+     P F                    E    
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 357 NIVKKPL--TFPT-QSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHP 407
           ++ K P    +P   + +S+           RDL+  LL  +P  R+     A +   HP
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHP 284

Query: 408 FFKGLN 413
           +F    
Sbjct: 285 YFSDFC 290

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 89.8 bits (223), Expect = 4e-20
 Identities = 55/317 (17%), Positives = 93/317 (29%), Gaps = 99/317 (31%)

Query: 58  SSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLY 117
             D     +   +             L      G  G V+   L N+Y            
Sbjct: 11  GVDLGTENLYFQS---------MPLQLLEVKARGRFGCVWKAQLLNEY-----------V 50

Query: 118 AMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY-AEFEASNFS---CIVMEFCSG 173
           A+K+   +     K+  + E E   L  + H  +     AE   ++      ++  F   
Sbjct: 51  AVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106

Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM----------LGIIYRDLKPENVL 223
           G L            S       A  +   L YLH             I +RD+K +NVL
Sbjct: 107 GSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL 163

Query: 224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSK 283
           ++++    ++DF L+                                         F + 
Sbjct: 164 LKNNLTACIADFGLA---------------------------------------LKFEAG 184

Query: 284 KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA-----VDWWAFGIFIYE 338
           K    T  +              VGT  Y++PEV  G  +        +D +A G+ ++E
Sbjct: 185 KSAGDTHGQ--------------VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230

Query: 339 MIYGRTPFAAPSNETTL 355
           +    T    P +E  L
Sbjct: 231 LASRCTAADGPVDEYML 247

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPC-CLYAMKVVNKEVLEKKKKVHRAEME 139
           D +    +G G  G V              H P   + A+K +   V  +++K  R  M+
Sbjct: 8   DLEPIMELGRGAYGVVEKMR----------HVPSGQIMAVKRIRATVNSQEQK--RLLMD 55

Query: 140 KKI-LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYA 197
             I ++ +D PF  T Y          I ME          +      +          A
Sbjct: 56  LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115

Query: 198 AEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDF 235
             ++ ALE+LH  L +I+RD+KP NVL+ + G + + DF
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF 154

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 12/112 (10%)

Query: 304 CSFVGTHEYVSPEVASGGSHGNA----VDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNI 358
               G   Y++PE  +   +        D W+ GI + E+   R P+ +       L+ +
Sbjct: 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226

Query: 359 VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           V++P   P       S     D  S  L K+   R        ++  HPFF 
Sbjct: 227 VEEPS--PQLPADKFSA-EFVDFTSQCLKKNSKER----PTYPELMQHPFFT 271

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-E 137
           F +  L   IG G  G VY                    A+K    +  E   +      
Sbjct: 6   FAELTLEEIIGIGGFGKVYRAFWIGDE-----------VAVKAARHDPDEDISQTIENVR 54

Query: 138 MEKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
            E K+  ML HP +  L     +  N  C+VMEF  GG L+ +      KR        +
Sbjct: 55  QEAKLFAMLKHPNIIALRGVCLKEPNL-CLVMEFARGGPLNRVLSG---KRIPPDILVNW 110

Query: 197 AAEVLVALEYLHMLG---IIYRDLKPENVLVRSDGHIM--------LSDFDLS 238
           A ++   + YLH      II+RDLK  N+L+               ++DF L+
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--P 362
           S  G + +++PEV          D W++G+ ++E++ G  PF           +      
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232

Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           L  P+  P          L+    N DP +R
Sbjct: 233 LPIPSTCPEPF-----AKLMEDCWNPDPHSR 258

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 88.8 bits (221), Expect = 1e-19
 Identities = 64/331 (19%), Positives = 96/331 (29%), Gaps = 109/331 (32%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E K+LK L H  L  L    +      +V EF     +       P+        + Y  
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNG-LDYQVVQKYLF 131

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           +++  + + H   II+RD+KPEN+LV   G + L DF  +                    
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA-------------------- 171

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE-----YV 313
                              R   +       P  ++                E     Y 
Sbjct: 172 -------------------RTLAA-------PGEVY--------------DDEVATRWYR 191

Query: 314 SPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVK----------- 360
           +PE+  G    G AVD WA G +   EM  G   F   S+   L +I+            
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLV-TEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250

Query: 361 --------KPLTFPTQSP--------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVK 404
                     +  P              +SE    DL    L+ DP  R       A++ 
Sbjct: 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSE-VVIDLAKKCLHIDPDKRP----FCAELL 305

Query: 405 THPFFKGLNFALIRSLTPPEIPGMRRQKTMP 435
            H FF+   F               + K   
Sbjct: 306 HHDFFQMDGF-------AERFSQELQLKVQK 329

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +    +IG G  GTVY   ++    Q          A++ +N   L+++ K      E  
Sbjct: 22  YTRFEKIGQGASGTVYTA-MDVATGQ--------EVAIRQMN---LQQQPKKELIINEIL 69

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           +++   +P +      +   +   +VME+ +GG L  +                   E L
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECL 126

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
            ALE+LH   +I+RD+K +N+L+  DG + L+DF
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 14/110 (12%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKK 361
           + VGT  +++PEV +  ++G  VD W+ GI   EMI G  P+    NE  LR    I   
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIATN 231

Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
               P  Q+P  +S    RD ++  L  D   R      A ++  H F K
Sbjct: 232 GT--PELQNPEKLSAIF-RDFLNRCLEMDVEKRG----SAKELLQHQFLK 274

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 68/361 (18%), Positives = 113/361 (31%), Gaps = 128/361 (35%)

Query: 131 KKVHRAEMEK-----------KILKML---DHPFLPTLY-----AEFEASNFSCIVMEFC 171
           K+V R +  +            +L+ L   +HP +  L+     +  +      +V E  
Sbjct: 43  KRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101

Query: 172 SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM 231
              DL +   K P       + +    ++L  L++LH   +++RDLKP+N+LV S G I 
Sbjct: 102 DQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160

Query: 232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPN 291
           L+DF L+                                       R +           
Sbjct: 161 LADFGLA---------------------------------------RIYSF-------QM 174

Query: 292 RLFVAEPVAARSCSFVGTHE-----YVSPEVASGGSHGNAVDWWAFG-IFIYEMIYGRTP 345
            L               T       Y +PEV    S+   VD W+ G IF  EM   +  
Sbjct: 175 AL---------------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF-AEMFRRKPL 218

Query: 346 FAAPS---------------NETTLRNIVKKPL-TFPTQSPSSMSEY------HARDLIS 383
           F   S                E      V  P   F ++S   + ++        +DL+ 
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 278

Query: 384 GLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKS 443
             L  +P  R+     A    +HP+F        + L   +            P  +  S
Sbjct: 279 KCLTFNPAKRI----SAYSALSHPYF--------QDLERCKENLD-----SHLPPSQNTS 321

Query: 444 Q 444
           +
Sbjct: 322 E 322

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 15/154 (9%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
            D + +IG G  G V L        +          A+K+++   L K+++      E  
Sbjct: 47  LDSYVKIGEGSTGIVCLA-REKHSGR--------QVAVKMMD---LRKQQRRELLFNEVV 94

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           I++   H  +  +Y  +       ++MEF  GG L  +       R +          VL
Sbjct: 95  IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVL 151

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
            AL YLH  G+I+RD+K +++L+  DG + LSDF
Sbjct: 152 QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDF 185

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 18/123 (14%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKK 361
           S VGT  +++PEV S   +   VD W+ GI + EM+ G  P+    +++ ++    +   
Sbjct: 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF---SDSPVQAMKRLRDS 256

Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRG-AADVKTHPFFKGLNFALIRS 419
           P   P  ++   +S    RD +  +L +DP      +R  A ++  HPF       L   
Sbjct: 257 PP--PKLKNSHKVSPVL-RDFLERMLVRDP-----QERATAQELLDHPFLL--QTGLPEC 306

Query: 420 LTP 422
           L P
Sbjct: 307 LVP 309

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 89.0 bits (221), Expect = 1e-19
 Identities = 75/417 (17%), Positives = 126/417 (30%), Gaps = 131/417 (31%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           R++G G   TV+L        +D         AMK+V       K     AE E K+L+ 
Sbjct: 25  RKLGWGHFSTVWLA-------KD--MVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQR 71

Query: 146 L--------DHPFLP---TLYAEFEASNFS----CIVMEFCSGGDLHSLRHKQPHKRFSL 190
           +        D         L   F     +     +V E   G +L +L  K  H+   L
Sbjct: 72  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPL 130

Query: 191 TSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
              +  + ++L+ L+Y+H   GII+ D+KPEN        +++   D       I     
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN--------VLMEIVDSPENLIQI----- 177

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
                                +++   N  +  +                     + + T
Sbjct: 178 ---------------------KIADLGNACWYDEHY------------------TNSIQT 198

Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN------IV---- 359
            EY SPEV  G   G   D W+    I+E+I G   F      +  ++      I+    
Sbjct: 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258

Query: 360 -------------------------KKPLTFPTQSPSSMSEYHAR--------DLISGLL 386
                                       L F         +Y           D +S +L
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318

Query: 387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKS 443
             DP  R      A  +  HP+ K         +  P+         +P   ++++ 
Sbjct: 319 QLDPRKRA----DAGGLVNHPWLKDTLGM--EEIRVPDRELYGSGSDIPGWFEEVRD 369

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 88.4 bits (219), Expect = 1e-19
 Identities = 62/289 (21%), Positives = 91/289 (31%), Gaps = 86/289 (29%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
             +  L   IG G  G VY  SL+ +             A+KV +       ++    E 
Sbjct: 12  LDNLKLLELIGRGRYGAVYKGSLDERP-----------VAVKVFSFA----NRQNFINEK 56

Query: 139 EKKILKMLDHPFLPTLY-AEFEASNFS----CIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
               + +++H  +      +   +        +VME+   G L               S+
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSS 113

Query: 194 RFYAAEVLVALEYLHM---------LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
              A  V   L YLH            I +RDL   NVLV++DG  ++SDF LS      
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS------ 167

Query: 245 PAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC 304
                                                      LT NRL         + 
Sbjct: 168 -----------------------------------------MRLTGNRLVRPGEEDNAAI 186

Query: 305 SFVGTHEYVSPEVASG-------GSHGNAVDWWAFGIFIYEMIYGRTPF 346
           S VGT  Y++PEV  G        S    VD +A G+  +E+    T  
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 46/280 (16%), Positives = 85/280 (30%), Gaps = 87/280 (31%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
            +   + ++IG G  G V++     +             A+KV          +    E 
Sbjct: 36  AKQIQMVKQIGKGRYGEVWMGKWRGEK-----------VAVKVFFTTEEASWFR----ET 80

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFS----CIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           E     ++ H  +    A       S     ++ ++   G L+              S  
Sbjct: 81  EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSML 137

Query: 195 FYAAEVLVALEYLHML--------GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
             A   +  L +LH           I +RDLK +N+LV+ +G   ++D  L++       
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV------- 190

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                          +F        + PN             + 
Sbjct: 191 -------------------------------KFISDTNEVDIPPN-------------TR 206

Query: 307 VGTHEYVSPEVASGGSHGN------AVDWWAFGIFIYEMI 340
           VGT  Y+ PEV     + N        D ++FG+ ++E+ 
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 37/202 (18%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
            R   L   IG G  G V+      +             A+K+ +      +++    E 
Sbjct: 41  ARTIVLQESIGKGRFGEVWRGKWRGEE-----------VAVKIFSSR----EERSWFREA 85

Query: 139 EKKILKMLDHPFLPTLY-AEFEASNFS---CIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           E     ML H  +     A+ + +       +V ++   G L    ++      ++    
Sbjct: 86  EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMI 142

Query: 195 FYAAEVLVALEYLHM--------LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
             A      L +LHM          I +RDLK +N+LV+ +G   ++D  L++       
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV------- 195

Query: 247 VESPASSPEAASPRSQTYTRQY 268
               A+     +P  +  T++Y
Sbjct: 196 RHDSATDTIDIAPNHRVGTKRY 217

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 63/322 (19%), Positives = 100/322 (31%), Gaps = 106/322 (32%)

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH--KQPHKRFSLTSARFY 196
           E ++LK L HP L  L   F       +V E+C     H++ H   +  +       +  
Sbjct: 52  EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD----HTVLHELDRYQRGVPEHLVKSI 107

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
             + L A+ + H    I+RD+KPEN+L+     I L DF  +                  
Sbjct: 108 TWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA------------------ 149

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE----- 311
                                R           P+  +                E     
Sbjct: 150 ---------------------RLLTG-------PSDYY--------------DDEVATRW 167

Query: 312 YVSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVK--------- 360
           Y SPE+  G +  G  VD WA G +F  E++ G   +   S+   L  I K         
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVF-AELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH 226

Query: 361 ----------KPLTFPTQSP--------SSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
                       +  P             ++S   A  L+ G L+ DP  RL        
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLELKFPNISY-PALGLLKGCLHMDPTERL----TCEQ 281

Query: 403 VKTHPFFKGLNFALIRSLTPPE 424
           +  HP+F+ +      +    +
Sbjct: 282 LLHHPYFENIREIEDLAKEHDK 303

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 87.5 bits (217), Expect = 4e-19
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F   R IG G  G VY    + +  +        + A+K ++    +  +K      E +
Sbjct: 56  FSDLREIGHGSFGAVYFA-RDVRNSE--------VVAIKKMSYSGKQSNEKWQDIIKEVR 106

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
            L+ L HP        +   + + +VME+C G     L   +  K              L
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 164

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
             L YLH   +I+RD+K  N+L+   G + L DF
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 198

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 16/112 (14%)

Query: 305 SFVGTHEYVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NI 358
           SFVGT  +++PEV      G +   VD W+ GI   E+   + P     N   +    +I
Sbjct: 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL---FNMNAMSALYHI 265

Query: 359 VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            +     P       SE + R+ +   L K P +R      +  +  H F  
Sbjct: 266 AQNES--PALQSGHWSE-YFRNFVDSCLQKIPQDRP----TSEVLLKHRFVL 310

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 86.6 bits (215), Expect = 4e-19
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           FD+  ++G G  G+VY    + +  Q        + A+K V    +E   +    E+   
Sbjct: 31  FDVLEKLGEGSYGSVYKAI-HKETGQ--------IVAIKQVP---VESDLQEIIKEIS-- 76

Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
           I++  D P +   Y  +  +    IVME+C  G +  +  +  +K  +           L
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI-IRLRNKTLTEDEIATILQSTL 135

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
             LEYLH +  I+RD+K  N+L+ ++GH  L+DF
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF 169

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 55.8 bits (135), Expect = 7e-09
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 14/110 (12%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKK 361
           + +GT  +++PEV     +    D W+ GI   EM  G+ P+   ++   +R    I   
Sbjct: 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY---ADIHPMRAIFMIPTN 240

Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           P   PT + P   S+ +  D +   L K P  R      A  +  HPF +
Sbjct: 241 PP--PTFRKPELWSD-NFTDFVKQCLVKSPEQRA----TATQLLQHPFVR 283

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 86.5 bits (215), Expect = 6e-19
 Identities = 77/426 (18%), Positives = 131/426 (30%), Gaps = 147/426 (34%)

Query: 37  LSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTV 96
           ++        + E  +  P   S  A  +  S             +    ++G G  G V
Sbjct: 1   MAHHHHHHMGTLEAQTQGPGSMSVSAAPSATSID----------RYRRITKLGEGTYGEV 50

Query: 97  YLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK-----------KILKM 145
           Y      K      +E     A+K +            R E E+            +LK 
Sbjct: 51  Y------KAIDTVTNE---TVAIKRI------------RLEHEEEGVPGTAIREVSLLKE 89

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L H  +  L +    ++   ++ E+    DL     K P    S+   + +  +++  + 
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGVN 146

Query: 206 YLHMLGIIYRDLKPENVLV-----RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           + H    ++RDLKP+N+L+          + + DF L+                      
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA---------------------- 184

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE-----YVSP 315
                            R FG        P R F              THE     Y  P
Sbjct: 185 -----------------RAFGI-------PIRQF--------------THEIITLWYRPP 206

Query: 316 EVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPS---------------NETTLRNI 358
           E+  G  H   +VD W+   I+  EM+     F   S               ++TT   +
Sbjct: 207 EILLGSRHYSTSVDIWSIACIW-AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265

Query: 359 VKKP---LTFPTQSPSSMSEY-------HARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
              P    +FP     ++             DL++ +L  DP  R+     A +   HP+
Sbjct: 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI----SAKNALEHPY 321

Query: 409 FKGLNF 414
           F   +F
Sbjct: 322 FSHNDF 327

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 86.3 bits (214), Expect = 6e-19
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 20/164 (12%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           F+L   +G G  G VY    + K  Q        L A+KV++    E+++     + E  
Sbjct: 26  FELVELVGNGTYGQVYKG-RHVKTGQ--------LAAIKVMDVTGDEEEE----IKQEIN 72

Query: 142 ILKML-DHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
           +LK    H  + T Y  F   N         +VMEFC  G +  L               
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132

Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   E+L  L +LH   +I+RD+K +NVL+  +  + L DF +S
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 18/114 (15%)

Query: 305 SFVGTHEYVSPEVA-----SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--- 356
           +F+GT  +++PEV         ++    D W+ GI   EM  G  P     +   +R   
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL---CDMHPMRALF 244

Query: 357 NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            I + P   P       S+   +  I   L K+   R         +  HPF +
Sbjct: 245 LIPRNP--APRLKSKKWSKK-FQSFIESCLVKNHSQRP----ATEQLMKHPFIR 291

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 86.5 bits (215), Expect = 7e-19
 Identities = 84/400 (21%), Positives = 123/400 (30%), Gaps = 126/400 (31%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK------ 140
            +G G   TVY           +  +       K  N+ V  KK K+      K      
Sbjct: 17  FLGEGQFATVY-----------KARD-------KNTNQIVAIKKIKLGHRSEAKDGINRT 58

Query: 141 -----KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                K+L+ L HP +  L   F   +   +V +F    DL  +  K      + +  + 
Sbjct: 59  ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII-KDNSLVLTPSHIKA 116

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           Y    L  LEYLH   I++RDLKP N+L+  +G + L+DF L+                 
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA----------------- 159

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE---- 311
                                 + FGS       PNR +              TH+    
Sbjct: 160 ----------------------KSFGS-------PNRAY--------------THQVVTR 176

Query: 312 -YVSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPS---------------NET 353
            Y +PE+  G    G  VD WA G I   E++         S                E 
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCIL-AELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235

Query: 354 TLRNIVKKPL--TFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKT 405
              ++   P   TF +     +            DLI GL   +PC R+     A     
Sbjct: 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI----TATQALK 291

Query: 406 HPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQKIKSQS 445
             +F            P     +   K    P   IK + 
Sbjct: 292 MKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKR 331

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 69/334 (20%), Positives = 102/334 (30%), Gaps = 119/334 (35%)

Query: 131 KKVHRAEMEK-----------KILKMLDHPFLPTLY------AEFEASNFSCI--VMEFC 171
           KKV   E EK           KIL++L H  +  L       A         I  V +FC
Sbjct: 48  KKV-LMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

Query: 172 SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM 231
              DL  L       +F+L+  +     +L  L Y+H   I++RD+K  NVL+  DG + 
Sbjct: 107 EH-DLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 164

Query: 232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPN 291
           L+DF L+                                       R F           
Sbjct: 165 LADFGLA---------------------------------------RAFSL--------- 176

Query: 292 RLFVAEPVAARSCSFVGTHE-----YVSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRT 344
                    ++   +  T+      Y  PE+  G    G  +D W  G I   EM     
Sbjct: 177 ------AKNSQPNRY--TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSP 227

Query: 345 PFAAPSNETTLRNIVK-------------------KPLTFPTQSPSSMSEY--------H 377
                + +  L  I +                   + L         + +         +
Sbjct: 228 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 287

Query: 378 ARDLISGLLNKDPCNRLGSKRG-AADVKTHPFFK 410
           A DLI  LL  DP     ++R  + D   H FF 
Sbjct: 288 ALDLIDKLLVLDP-----AQRIDSDDALNHDFFW 316

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 60/346 (17%), Positives = 115/346 (33%), Gaps = 77/346 (22%)

Query: 56  HRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCC 115
           H S      +    T   + G  F  + L R +G G +G VY      + R         
Sbjct: 10  HSSGLVPRGSHMDGTAESREGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIV------- 62

Query: 116 LYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY--AEFEASNFSCIVMEFCSG 173
             A+K++++ +        R + E +    L  P +  ++   E +   +  + M   +G
Sbjct: 63  --ALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY--VDMRLING 118

Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
            DL ++  +      +   A     ++  AL+  H  G  +RD+KPEN+LV +D    L 
Sbjct: 119 VDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV 176

Query: 234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL 293
           DF ++                 A +    T                 G+  +  + P R 
Sbjct: 177 DFGIA----------------SATTDEKLTQL-----------GNTVGT--LYYMAPER- 206

Query: 294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET 353
           F       R+                        D +A    +YE + G  P+       
Sbjct: 207 FSESHATYRA------------------------DIYALTCVLYECLTGSPPYQGDQ--- 239

Query: 354 TLRNIVKKPLTFPTQSPSSMSE---YHARDLISGLLNKDPCNRLGS 396
              +++   +      PS++          +I+  + K+P +R  +
Sbjct: 240 --LSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT 283

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 74/371 (19%), Positives = 120/371 (32%), Gaps = 120/371 (32%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D+ L R++G G    V      N       +E      +K++      KKKK+ R   E 
Sbjct: 37  DYQLVRKLGRGKYSEV--FEAINI----TNNEKV---VVKILK---PVKKKKIKR---EI 81

Query: 141 KILKML-DHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           KIL+ L   P + TL        S    +V E  +  D   L         +    RFY 
Sbjct: 82  KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYM 136

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
            E+L AL+Y H +GI++RD+KP NV++      + L D+ L+                  
Sbjct: 137 YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA------------------ 178

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                    ++Y+ R                                   V +  +  PE
Sbjct: 179 ---EFYHPGQEYNVR-----------------------------------VASRYFKGPE 200

Query: 317 VASGGSH-GNAVDWWAFGIFIYEMIYGRTPF----------------------------- 346
           +         ++D W+ G  +  MI+ + PF                             
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260

Query: 347 ---AAPSNETTLRNIVKKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA 401
                P     L    +K       +++   +S   A D +  LL  D  +RL     A 
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSP-EALDFLDKLLRYDHQSRL----TAR 315

Query: 402 DVKTHPFFKGL 412
           +   HP+F  +
Sbjct: 316 EAMEHPYFYTV 326

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 82.0 bits (203), Expect = 1e-17
 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 82  FDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-EME 139
           + L R+IG+G  G +YL   +                A+K+      E  K  H    +E
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEE----------VAIKL------ECVKTKHPQLHIE 54

Query: 140 KKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            KI KM+     +PT+       +++ +VME   G  L  L +    ++FSL +    A 
Sbjct: 55  SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLAD 112

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLS 238
           +++  +EY+H    I+RD+KP+N L+        + + DF L+
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 82.4 bits (204), Expect = 1e-17
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R     R +G G  G V LC  +     D   E     A+K +  E         + E+E
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDP--EGDNTGEQV---AVKSLKPESGGNHIADLKKEIE 75

Query: 140 KKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFY 196
             IL+ L H  +         +  N   ++MEF   G L   L   +   + +L     Y
Sbjct: 76  --ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKY 131

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++   ++YL     ++RDL   NVLV S+  + + DF L+
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 84.5 bits (209), Expect = 1e-17
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 24/159 (15%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK--VHRAEMEKK 141
           +   I  G +G +YL         DR      +    VV K ++          A  E++
Sbjct: 84  VKGCIAHGGLGWIYLA-------LDRN-----VNGRPVVLKGLVHSGDAEAQAMAMAERQ 131

Query: 142 ILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
            L  + HP +  ++   E ++        IVME+  G  L   + +    +  +  A  Y
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAY 187

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
             E+L AL YLH +G++Y DLKPEN+++  +  + L D 
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLIDL 225

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 50.2 bits (120), Expect = 9e-07
 Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 12/92 (13%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
              GT  + +PE+   G    A D +  G  +  +                       L 
Sbjct: 236 YLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY---------VDGLP 285

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS 396
                  +   Y    L+   ++ DP  R  +
Sbjct: 286 EDDPVLKTYDSYGR--LLRRAIDPDPRQRFTT 315

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 82.4 bits (204), Expect = 1e-17
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R     R +G G  G V L   +     D   E     A+K +  +   + +   + E++
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPT--NDGTGEMV---AVKALKADAGPQHRSGWKQEID 85

Query: 140 KKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFY 196
             IL+ L H  +       E   +    +VME+   G L   L          L     +
Sbjct: 86  --ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLF 139

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A ++   + YLH    I+RDL   NVL+ +D  + + DF L+
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 81.3 bits (201), Expect = 4e-17
 Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)

Query: 54  KPHRSSDFAYSAIRSATFGRKTGLTFRDFD----------LHRRIGAGDIGTVYLCSLNN 103
             H   D+      +  F    G  F D D            +++G G+ G+V +C  + 
Sbjct: 5   HHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDP 64

Query: 104 KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA--EFEAS 161
              QD   E     A+K +     E  +   R   E +ILK L H  +            
Sbjct: 65  --LQDNTGEVV---AVKKLQHSTEEHLRDFER---EIEILKSLQHDNIVKYKGVCYSAGR 116

Query: 162 NFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YAAEVLVALEYLHMLGIIYRDLK 218
               ++ME+   G L   L+  +      +   +   Y +++   +EYL     I+RDL 
Sbjct: 117 RNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 172

Query: 219 PENVLVRSDGHIMLSDFDLS 238
             N+LV ++  + + DF L+
Sbjct: 173 TRNILVENENRVKIGDFGLT 192

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 80.4 bits (199), Expect = 9e-17
 Identities = 81/376 (21%), Positives = 125/376 (33%), Gaps = 117/376 (31%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            DF L   +G G  G V  CS  +K   +         A+K +     +K     R   E
Sbjct: 11  SDFQLKSLLGEGAYGVV--CSATHKPTGEI-------VAIKKIE--PFDKPLFALRTLRE 59

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHKQP----HKRFSL 190
            KILK   H  + T++      +F       I+ E     DLH +   Q     H ++ +
Sbjct: 60  IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFI 118

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESP 250
                Y  + L A++ LH   +I+RDLKP N+L+ S+  + + DF L+            
Sbjct: 119 -----Y--QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA------------ 159

Query: 251 ASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
                          R               +      T  +  + E VA R        
Sbjct: 160 ---------------RIIDE----------SAADNSEPTGQQSGMVEFVATRW------- 187

Query: 311 EYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA----------------PSNET 353
            Y +PEV    +    A+D W+ G  + E+   R  F                  P ++ 
Sbjct: 188 -YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246

Query: 354 TLRNIV---------------KKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS 396
            LR I                  PL   FP  +P         DL+  +L  DP  R+  
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPK------GIDLLQRMLVFDPAKRI-- 298

Query: 397 KRGAADVKTHPFFKGL 412
              A +   HP+ +  
Sbjct: 299 --TAKEALEHPYLQTY 312

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 67/319 (21%), Positives = 115/319 (36%), Gaps = 97/319 (30%)

Query: 131 KKVHRAEMEK----KILKMLDHPFLPTL----YAEFEASNFSCI--VMEFCSGGDLHSL- 179
           KKV + +  K    +I++++ HP +  L    Y+  +  +   +  V+E+     ++   
Sbjct: 70  KKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV-PETVYRAS 128

Query: 180 -RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             + +  +   +   + Y  ++L +L Y+H +GI +RD+KP+N+L+     +      L 
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV------LK 182

Query: 239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP 298
           L                                        FGS KI  L      V+  
Sbjct: 183 LID--------------------------------------FGSAKI--LIAGEPNVSY- 201

Query: 299 VAARSCSFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
                   + +  Y +PE+  G ++    +D W+ G  + E++ G+  F   S    L  
Sbjct: 202 --------ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE 253

Query: 358 IVK-----------------KPLTFPTQSPSSMSEY-------HARDLISGLLNKDPCNR 393
           I+K                     FP   P   S+         A DLIS LL   P  R
Sbjct: 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSAR 313

Query: 394 LGSKRGAADVKTHPFFKGL 412
           L     A +   HPFF  L
Sbjct: 314 L----TAIEALCHPFFDEL 328

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 79.3 bits (196), Expect = 1e-16
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 26/165 (15%)

Query: 82  FDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-EME 139
           + + RRIG G  G ++   +L N  +           A+K       E ++        E
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQ----------VAIKF------EPRRSDAPQLRDE 55

Query: 140 KKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            +  K+L     +P +Y   +    + +V++   G  L  L      ++FS+ +    A 
Sbjct: 56  YRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAK 113

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
           ++L  ++ +H   ++YRD+KP+N L+          I + DF + 
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 26/169 (15%), Positives = 45/169 (26%), Gaps = 20/169 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L    G       +                    A+  V+ + +     +         L
Sbjct: 35  LLIFHGGVPPLQFWQA------LDTALDRQV---ALTFVDPQGVLPDDVLQETLSRTLRL 85

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
             +D P +  +           +V E+  GG L  +    P    S   A      +  A
Sbjct: 86  SRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP----SPVGAIRAMQSLAAA 141

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
            +  H  G+      P  V V  DG ++L+         A     +P  
Sbjct: 142 ADAAHRAGVALSIDHPSRVRVSIDGDVVLAYP-------ATMPDANPQD 183

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 11/83 (13%), Positives = 22/83 (26%), Gaps = 6/83 (7%)

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
            P      +     D    G  +Y ++  R P       + L    +     P   P+ +
Sbjct: 172 YPATMPDANP--QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI-EPADI 228

Query: 374 SEYHARDL---ISGLLNKDPCNR 393
                  +    +  +  D   R
Sbjct: 229 DRDIPFQISAVAARSVQGDGGIR 251

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 17/164 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R     +++G G+ G+V +C  +    QD   E     A+K +     E  +   R   E
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVV---AVKKLQHSTEEHLRDFER---E 61

Query: 140 KKILKMLDHPFLPTLYAEFEASNFS--CIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF- 195
            +ILK L H  +        ++      ++ME+   G L   L+  +      +   +  
Sbjct: 62  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLL 117

Query: 196 -YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            Y +++   +EYL     I+RDL   N+LV ++  + + DF L+
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 78.9 bits (195), Expect = 3e-16
 Identities = 74/399 (18%), Positives = 114/399 (28%), Gaps = 138/399 (34%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV-NKE---------- 125
           L  R +++   +G G  G V  C         RG       A+K++ N            
Sbjct: 17  LQER-YEIVGNLGEGTFGKVVEC-----LDHARGKSQV---ALKIIRNVGKYREAARLEI 67

Query: 126 -VLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP 184
            VL+K K+    E +   + M D          F      CI  E   G +      +  
Sbjct: 68  NVLKKIKE-KDKENKFLCVLMSDW---------FNFHGHMCIAFELL-GKNTFEFLKENN 116

Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
            + + L   R  A ++  AL +LH   + + DLKPEN+L                 ++  
Sbjct: 117 FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENIL---------------FVNSEF 161

Query: 245 PAVESPASSPEAASPR----------SQTYTRQYSTRL--SRFLNRFFGSKKIQTLTPNR 292
             + +   S E  S +          S T+  ++ T +  +R                  
Sbjct: 162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH----------------- 204

Query: 293 LFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
                              Y  PEV          D W+ G  ++E   G T F    N 
Sbjct: 205 -------------------YRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245

Query: 353 TTLRNIV---------------------KKPLTFPTQSPSSMSE---------------- 375
             L  +                      K  L +   S                      
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305

Query: 376 --YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
                 DL+  +L  DP  R+      A+   HPFF GL
Sbjct: 306 EHVQLFDLMRRMLEFDPAQRI----TLAEALLHPFFAGL 340

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 73/384 (19%), Positives = 131/384 (34%), Gaps = 108/384 (28%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R ++L +++G G  G V      ++   +         A+K +     +      R   E
Sbjct: 9   RKYELVKKLGKGAYGIV--WKSIDRRTGEV-------VAVKKIFD-AFQNSTDAQRTFRE 58

Query: 140 KKILK-MLDHPFLPTLYAEFEASNFSCI--VMEFCSGGDLHSLRHKQP----HKRFSLTS 192
             IL  +  H  +  L     A N   +  V ++    DLH++         HK++ +  
Sbjct: 59  IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVHKQYVV-- 115

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
              Y  +++  ++YLH  G+++RD+KP N+L+ ++ H+ ++DF LS     I  V +   
Sbjct: 116 ---Y--QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                +  +    +   T                                   +V T  Y
Sbjct: 171 LSINENTENFDDDQPILT----------------------------------DYVATRWY 196

Query: 313 VSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFA----------------APSNET- 353
            +PE+  G +     +D W+ G I   E++ G+  F                  PSNE  
Sbjct: 197 RAPEILLGSTKYTKGIDMWSLGCILG-EILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255

Query: 354 -------------TLRNIVKKPL------------TFPTQSPSSMSEYHARDLISGLLNK 388
                        +L+  V+                    +P +     A DL+  LL  
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315

Query: 389 DPCNRLGSKRGAADVKTHPFFKGL 412
           +P  R+     A D   HPF    
Sbjct: 316 NPNKRI----SANDALKHPFVSIF 335

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 17/164 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R      ++G G+ G+V LC  +     D         A+K +     ++++   R   E
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDP--LGDNTGALV---AVKQLQHSGPDQQRDFQR---E 74

Query: 140 KKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF- 195
            +ILK L   F+                +VME+   G L   L+  +      L ++R  
Sbjct: 75  IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLL 130

Query: 196 -YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            Y++++   +EYL     ++RDL   N+LV S+ H+ ++DF L+
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 75/391 (19%), Positives = 124/391 (31%), Gaps = 120/391 (30%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR- 135
           L    F + R++G G  G V LC       Q   ++    YA+KVV        KK  R 
Sbjct: 33  LNNA-FLVIRKMGDGTFGRVLLC-------QHIDNK--KYYAVKVVRN-----IKKYTRS 77

Query: 136 AEMEKKILKML------DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           A++E  ILK +      ++  +   + +F   +  C++ E   G  L+ +  +  +  F 
Sbjct: 78  AKIEADILKKIQNDDINNNNIV-KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFH 135

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
           +   + Y  E+L AL YL  + + + DLKPEN+L+          F+ SL +        
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD------PYFEKSLITVRRVTDGK 189

Query: 250 PASSPEAASPR-------SQTYTRQYSTRL--SRFLNRFFGSKKIQTLTPNRLFVAEPVA 300
                   S           T+   Y   +  +R                          
Sbjct: 190 KIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQ------------------------- 224

Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
                      Y +PEV        + D W+FG  + E+  G   F    +   L  +  
Sbjct: 225 -----------YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES 273

Query: 361 --------------------------KPLTFPTQSPSSMSEYHAR--------------- 379
                                       L +P  + S  S  H +               
Sbjct: 274 IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           D +  +L  DP  R       A++  H F +
Sbjct: 334 DFLYSILQIDPTLRP----SPAELLKHKFLE 360

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 78.6 bits (194), Expect = 6e-16
 Identities = 79/406 (19%), Positives = 137/406 (33%), Gaps = 114/406 (28%)

Query: 43  TSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRD-FDLHRRIGAGDIGTVYL--C 99
             +      S+K  R  D +      AT G+         +   + IG G  G VY    
Sbjct: 16  PVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKL 75

Query: 100 SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL----Y 155
             + +                V  K+VL+ K+  +R   E +I++ LDH  +  L    Y
Sbjct: 76  CDSGE---------------LVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFY 117

Query: 156 AEFEASNFSCI--VMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLG 211
           +  E  +   +  V+++     ++ +   + +  +   +   + Y  ++  +L Y+H  G
Sbjct: 118 SSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176

Query: 212 IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTR 271
           I +RD+KP+N+L+  D  +      L LC                               
Sbjct: 177 ICHRDIKPQNLLLDPDTAV------LKLCD------------------------------ 200

Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH-GNAVDWW 330
                   FGS K   L      V         S++ +  Y +PE+  G +   +++D W
Sbjct: 201 --------FGSAK--QLVRGEPNV---------SYICSRYYRAPELIFGATDYTSSIDVW 241

Query: 331 AFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------------KPLTFPTQSPSSM 373
           + G  + E++ G+  F   S    L  I+K                     FP       
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 301

Query: 374 SEY-------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           ++         A  L S LL   P  RL       +   H FF  L
Sbjct: 302 TKVFRPRTPPEAIALCSRLLEYTPTARL----TPLEACAHSFFDEL 343

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 77.7 bits (192), Expect = 7e-16
 Identities = 70/394 (17%), Positives = 115/394 (29%), Gaps = 128/394 (32%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV-NKE---------- 125
           L+ R +++   +G G  G V  C          G       A+K+V N +          
Sbjct: 12  LSAR-YEIVDTLGEGAFGKVVEC-----IDHKAGGRHV---AVKIVKNVDRYCEAARSEI 62

Query: 126 -VLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP 184
            VLE            + ++ML+          FE     CIV E   G   +    +  
Sbjct: 63  QVLEHLNT-TDPNSTFRCVQMLEW---------FEHHGHICIVFELL-GLSTYDFIKENG 111

Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
              F L   R  A ++  ++ +LH   + + DLKPEN+L     +    +          
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN---------- 161

Query: 245 PAVESPASSPEAASPR-----SQTYTRQYSTRL--SRFLNRFFGSKKIQTLTPNRLFVAE 297
           P ++    +      +     S TY  ++ + L  +R                       
Sbjct: 162 PKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH---------------------- 199

Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
                         Y +PEV          D W+ G  + E   G T F    ++  L  
Sbjct: 200 --------------YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245

Query: 358 IV---------------------KKPLTFPTQSPS---------SMSEY---------HA 378
           +                         L +   S +          + E+           
Sbjct: 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
            DLI  +L  DP  R+       +   HPFF  L
Sbjct: 306 FDLIQKMLEYDPAKRI----TLREALKHPFFDLL 335

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 77.3 bits (191), Expect = 7e-16
 Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 14/163 (8%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           + R +G G  G VY              EP    A+K VN+    +++     E    ++
Sbjct: 29  MSRELGQGSFGMVYEGVAKGV----VKDEPETRVAIKTVNEAASMRERIEFLNEAS--VM 82

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPH-----KRFSLTSARF-- 195
           K  +   +  L         + ++ME  + GDL S LR  +P           + ++   
Sbjct: 83  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            A E+   + YL+    ++RDL   N +V  D  + + DF ++
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 77.5 bits (191), Expect = 8e-16
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 14/168 (8%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKV--------VNKEVLEKKKKV 133
           + L       + G +Y  +                +++K+          +   ++  K 
Sbjct: 44  WKLKSFQTRDNQGILYE-AAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKP 102

Query: 134 HRAEMEKKILKMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            +    KK L       +PT          +  +V+    G  L S     P    S  S
Sbjct: 103 LQVNKWKK-LYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERS 160

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLS 238
               A  +L ALE+LH    ++ ++  EN+ V       + L+ +  +
Sbjct: 161 VLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFA 208

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 77.0 bits (190), Expect = 9e-16
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 28/166 (16%)

Query: 82  FDLHRRIGAGDIGTVYLC--SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR-AEM 138
           F + ++IG G+ G + L      N+Y            A+K      LE  K       +
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEY-----------VAIK------LEPMKSRAPQLHL 53

Query: 139 EKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           E +  K L     +P +Y       ++ +V+E   G  L  L      + FSL +    A
Sbjct: 54  EYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIA 111

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
            +++  +EY+H   +IYRD+KPEN L+   G+     I + DF L+
Sbjct: 112 IQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 76.8 bits (189), Expect = 2e-15
 Identities = 75/416 (18%), Positives = 121/416 (29%), Gaps = 128/416 (30%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
           ++G G  G VY         + +  +    YA+K +    +        A  E  +L+ L
Sbjct: 28  KVGRGTYGHVYKA-------KRKDGKDDKDYALKQIEGTGIS-----MSACREIALLREL 75

Query: 147 DHPFLPTLYAEFEASNFSCI--VMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV---- 200
            HP + +L   F +     +  + ++    DL  +       + +    +     V    
Sbjct: 76  KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLL 134

Query: 201 ---LVALEYLHMLGIIYRDLKPENVLVRSD----GHIMLSDFDLSLCSNAIPAVESPASS 253
              L  + YLH   +++RDLKP N+LV  +    G + ++D   +               
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA--------------- 179

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                   R F S       P +        A     V T  Y 
Sbjct: 180 ------------------------RLFNS-------PLKPL------ADLDPVVVTFWYR 202

Query: 314 SPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVK--------KPL 363
           +PE+  G  H   A+D WA G IF  E++     F     +    N             +
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIF-AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261

Query: 364 TFPTQS--P--SSMSEYH------------------------------ARDLISGLLNKD 389
            FP          M E+                               A  L+  LL  D
Sbjct: 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD 321

Query: 390 PCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPG-MRRQKTMPFPDQKIKSQ 444
           P  R+     +      P+F              +IP   R   T   PD K   +
Sbjct: 322 PIKRI----TSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKK 373

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 19/166 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVH-RAEMEKKI 142
           L R +G G+ G+V    L  +   D         A+K++  +++          E     
Sbjct: 27  LGRMLGKGEFGSVREAQLKQE---DGSFVKV---AVKMLKADIIASSDIEEFLREAA--C 78

Query: 143 LKMLDHPFLPTLYA------EFEASNFSCIVMEFCSGGDLHS-LR-HKQPHKRFSLTSAR 194
           +K  DHP +  L                 +++ F   GDLH+ L   +     F+L    
Sbjct: 79  MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138

Query: 195 F--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              +  ++   +EYL     I+RDL   N ++  D  + ++DF LS
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 12/159 (7%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
             +L R IG G  G V+     +    +         A+K       +  ++    E   
Sbjct: 16  RIELGRCIGEGQFGDVHQGIYMSP---ENPALAV---AIKTCKNCTSDSVREKFLQEAL- 68

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
             ++  DHP +  L      +    I+ME C+ G+L S L+ ++      L S   YA +
Sbjct: 69  -TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQ 124

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  AL YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 11/160 (6%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
               + + IG+GD G V    L       +   P    A+K +     E++++      E
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVP---GQRDVPV---AIKALKAGYTERQRR--DFLSE 100

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
             I+   DHP +  L         + IV E+   G L + LR      +F++        
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLR 158

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            V   + YL  LG ++RDL   NVLV S+    +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 68/371 (18%), Positives = 116/371 (31%), Gaps = 85/371 (22%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            ++ +   IG G  G V      +K  +          A+K VN+ + E      R   E
Sbjct: 26  DNYIIKHLIGRGSYGYV--YLAYDKNTEKN-------VAIKKVNR-MFEDLIDCKRILRE 75

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHS-LRHKQP----HKRFS 189
             IL  L   ++  LY      +        IV+E     DL    +        H +  
Sbjct: 76  ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTI 134

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVES 249
           L     Y   +L+   ++H  GII+RDLKP N L+  D  + + DF L+        + S
Sbjct: 135 L-----Y--NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART------INS 181

Query: 250 PASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
              +              ++  L +             LT                 V T
Sbjct: 182 EKDTNIVNDLEENEEPGPHNKNLKKQ------------LTS---------------HVVT 214

Query: 310 HEYVSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVKKPL---- 363
             Y +PE+     +   ++D W+ G IF  E++                   + PL    
Sbjct: 215 RWYRAPELILLQENYTKSIDIWSTGCIFA-ELLNMLQSHINDPTN-------RFPLFPGS 266

Query: 364 -TFPTQSPSSMSEYHARD------LISGLL---NKDPCNRLGSKRGAADVKTHPFFKGLN 413
             FP     +  + H +       +I  ++    +D    +        +K  P  K +N
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326

Query: 414 FALIRSLTPPE 424
                     +
Sbjct: 327 LKQKYPSISDD 337

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 75.1 bits (185), Expect = 4e-15
 Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
                + IGAG+ G VY   L       +   P    A+K +     EK++       E 
Sbjct: 45  CVTRQKVIGAGEFGEVYKGMLKTS--SGKKEVPV---AIKTLKAGYTEKQRV--DFLGEA 97

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            I+    H  +  L           I+ E+   G L   LR K     FS+         
Sbjct: 98  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRG 155

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   ++YL  +  ++RDL   N+LV S+    +SDF LS
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 11/159 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +  + + +GAG+ G V    L       +        A+K +     EK+++      E 
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLP---SKKEISV---AIKTLKVGYTEKQRR--DFLGEA 97

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            I+   DHP +  L      S    IV E+   G L S LR      +F++         
Sbjct: 98  SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRG 155

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   ++YL  +G ++RDL   N+L+ S+    +SDF L 
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 75.4 bits (186), Expect = 5e-15
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM-- 138
           D  L  +IG G+ G V+   L                A+K   + +        +A+   
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTL---------VAVKSCRETLPPDL----KAKFLQ 161

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
           E +ILK   HP +  L           IVME   GGD  + LR +       + +     
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMV 219

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +    +EYL     I+RDL   N LV     + +SDF +S
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 23/165 (13%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F   + +G+G  GTVY      +   ++   P    A+K + +    K  K    E   
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPV---AIKELREATSPKANKEILDEAY- 69

Query: 141 KILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHS-LRHKQPHKRFSLTSA 193
            ++  +D+P +  L          C      ++ +    G L   +R  + +        
Sbjct: 70  -VMASVDNPHVCRLLG-------ICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYL 119

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             +  ++   + YL    +++RDL   NVLV++  H+ ++DF L+
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 75.7 bits (186), Expect = 8e-15
 Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 12/213 (5%)

Query: 27  SSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHR 86
                S     + E    +S   ++S     +         +    R   +     +L R
Sbjct: 337 ERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGR 396

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
            IG G  G V+       Y            A+K       +  ++    E     ++  
Sbjct: 397 CIGEGQFGDVHQ----GIYMSPENPAMAV--AIKTCKNCTSDSVREKFLQEAL--TMRQF 448

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALE 205
           DHP +  L      +    I+ME C+ G+L S L+ ++      L S   YA ++  AL 
Sbjct: 449 DHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALA 505

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           YL     ++RD+   NVLV S+  + L DF LS
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 16/161 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE--M 138
           D  L+R +G G  G VY     N              A+K   K+     K+    +   
Sbjct: 13  DVVLNRILGEGFFGEVYEGVYTNH---KGEKINV---AVKTCKKDCTLDNKE----KFMS 62

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
           E  I+K LDHP +  L    E      I+ME    G+L   L   +      + +   Y+
Sbjct: 63  EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKN--SLKVLTLVLYS 119

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            ++  A+ YL  +  ++RD+   N+LV S   + L DF LS
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 17/160 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            +  L + +G+G  G V L     +Y            A+K++ +  + + +       E
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYD----------VAVKMIKEGSMSEDEFF----QE 53

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
            + +  L HP L   Y          IV E+ S G L + LR          +       
Sbjct: 54  AQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCY 111

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V   + +L     I+RDL   N LV  D  + +SDF ++
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 74/384 (19%), Positives = 123/384 (32%), Gaps = 133/384 (34%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
             +   + +G G  G V   S  +     R        A+K   K VL   + V  A  E
Sbjct: 11  SRYMDLKPLGCGGNGLV--FSAVDNDCDKR-------VAIK---KIVLTDPQSVKHALRE 58

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC--------------IVMEFCSGGDLHSLRHKQP- 184
            KI++ LDH  +  ++     S                  IV E+    DL ++  + P 
Sbjct: 59  IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPL 117

Query: 185 ---HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
              H R  +     Y  ++L  L+Y+H   +++RDLKP N+ + ++      D  L +  
Sbjct: 118 LEEHARLFM-----Y--QLLRGLKYIHSANVLHRDLKPANLFINTE------DLVLKIGD 164

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFG-SKKIQTLTPNRLFVAEPVA 300
                                                 FG ++ +     ++  ++E + 
Sbjct: 165 --------------------------------------FGLARIMDPHYSHKGHLSEGLV 186

Query: 301 ARSCSFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA----------- 348
            +         Y SP +    ++   A+D WA G    EM+ G+T FA            
Sbjct: 187 TKW--------YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238

Query: 349 -----PSNET-------------TLRNIVKKPLT--FPTQSPSSMSEYHARDLISGLLNK 388
                   E                     KPLT   P  S        A D +  +L  
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISR------EAVDFLEQILTF 292

Query: 389 DPCNRLGSKRGAADVKTHPFFKGL 412
            P +RL     A +  +HP+    
Sbjct: 293 SPMDRL----TAEEALSHPYMSIY 312

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D  L  ++G G  G V     +               A+K +  +VL + + +     E 
Sbjct: 19  DLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSV---AVKCLKPDVLSQPEAMDDFIREV 72

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
             +  LDH  L  LY          +V E    G L   LR  Q H  F L +   YA +
Sbjct: 73  NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQ 129

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V   + YL     I+RDL   N+L+ +   + + DF L 
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM 168

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 20/171 (11%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV----LEKK--KKVHR 135
           + +   IG G  G +YL  +N+               +KV   +      E K  ++  +
Sbjct: 37  WKVGLPIGQGGFGCIYLADMNSSESVGSDAP----CVVKVEPSDNGPLFTELKFYQRAAK 92

Query: 136 AEMEKKILKM--LDHPFLPTLYA----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
            E  +K ++   L +  +P  +     +    ++  ++M+   G DL  +      KRFS
Sbjct: 93  PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFS 150

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLS 238
             +    +  +L  LEY+H    ++ D+K  N+L+  ++   + L D+ L+
Sbjct: 151 RKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 37/178 (20%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           + L ++IG+G  G +YL             E    + +KV       + ++      E K
Sbjct: 39  WVLGKKIGSGGFGLIYLA------FPTNKPEKDARHVVKV-------EYQENGPLFSELK 85

Query: 142 ILKML---------------DHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHK 182
             + +               D+  +P  Y     EF+  ++  +VME   G DL  +  +
Sbjct: 86  FYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ 144

Query: 183 QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLS 238
             +  F  ++       +L  LEY+H    ++ D+K  N+L+  ++   + L+D+ LS
Sbjct: 145 --NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLS 200

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 21/161 (13%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              L  ++G G  G V++ + N   R           A+K +    +  +  +     E 
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEAFL----QEA 230

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YA 197
           +++K L H  L  LYA         IV E+ S G L   L+         L   +    A
Sbjct: 231 QVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMA 286

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 15/159 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D  +  ++G G  G VY                    A+K + ++ +E ++ +     E 
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKY------SLTV---AVKTLKEDTMEVEEFL----KEA 60

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            ++K + HP L  L           I+ EF + G+L   LR     +  S     + A +
Sbjct: 61  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQ 119

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  A+EYL     I+RDL   N LV  +  + ++DF LS
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            +    + IG+G  G V+L    NK +           A+K + +  + ++  +     E
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDK----------VAIKTIREGAMSEEDFI----EE 53

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
            +++  L HP L  LY         C+V EF   G L   LR ++    F+  +      
Sbjct: 54  AEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCL 111

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V   + YL    +I+RDL   N LV  +  I +SDF ++
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 151

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             + +G+G+ GTV        Y+  +  +     A+K++  E  +   K      E  ++
Sbjct: 21  EDKELGSGNFGTVKK----GYYQMKKVVKTV---AVKILKNEANDPALKDELLA-EANVM 72

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLV 202
           + LD+P++  +    EA ++  +VME    G L+  L+    ++     +      +V +
Sbjct: 73  QQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSM 128

Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            ++YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 129 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 16/159 (10%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
            +  IG G  G VY  +L +    D     C   A+K +N+     +      E    I+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDN---DGKKIHC---AVKSLNRITDIGEVSQFLTEGI--IM 80

Query: 144 KMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YAAE 199
           K   HP + +L      +     +V+ +   GDL + +R++  +     T      +  +
Sbjct: 81  KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQ 136

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V   ++YL     ++RDL   N ++     + ++DF L+
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 16/168 (9%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
            D   +  +G G    ++           + HE      +KV++K      +        
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEV--LLKVLDKAHRNYSESFFE---A 62

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
             ++  L H  L   Y      + + +V EF   G L + L+  +     ++      A 
Sbjct: 63  ASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAK 120

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM--------LSDFDLS 238
           ++  A+ +L    +I+ ++  +N+L+  +            LSD  +S
Sbjct: 121 QLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 24/163 (14%)

Query: 82  FDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA-EME 139
           F L R+IG+G  G +YL  ++                A+K+      E  K  H     E
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEE----------VAIKL------ENVKTKHPQLLYE 52

Query: 140 KKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            KI ++L     +P +       +++ +VM+   G  L  L +    K  SL +    A 
Sbjct: 53  SKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK-LSLKTVLMLAD 110

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLS 238
           +++  +E++H    ++RD+KP+N L+        + + DF L+
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           +D    + +G G  G V       +Y            A+K++ +  + + + +     E
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYD----------VAIKMIKEGSMSEDEFI----EE 69

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAA 198
            K++  L H  L  LY          I+ E+ + G L + LR  +   RF          
Sbjct: 70  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCK 127

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +V  A+EYL     ++RDL   N LV   G + +SDF LS
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 35/169 (20%), Positives = 59/169 (34%), Gaps = 20/169 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
               +G    G VY   L          E     A+K +  +     ++  R E    + 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGP----APGEQTQAVAIKTLKDKAEGPLREEFRHEAM--LR 66

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLV 202
             L HP +  L           ++  +CS GDLH  L  + PH     T         L 
Sbjct: 67  ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126

Query: 203 ALEYLHML-------------GIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             +++H++              ++++DL   NVLV    ++ +SD  L 
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 78/376 (20%), Positives = 121/376 (32%), Gaps = 124/376 (32%)

Query: 82  FDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           F + R  G G  GTV                          V  K+V++  +  +R    
Sbjct: 25  FQVERMAGQGTFGTVQLGKEKSTGM---------------SVAIKKVIQDPRFRNRELQI 69

Query: 140 KKILKMLDHP--------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
            + L +L HP        F      +     +  +VME+     LH        ++ +  
Sbjct: 70  MQDLAVLHHPNIVQLQSYFYTLGERDRR-DIYLNVVMEYV-PDTLHRCCRNYYRRQVAPP 127

Query: 192 SA--RFYAAEVLVALEYLHM--LGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIPA 246
               + +  +++ ++  LH+  + + +RD+KP NVLV  +DG        L LC      
Sbjct: 128 PILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG-------TLKLCD----- 175

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                            FGS K   L+P+   V         ++
Sbjct: 176 ---------------------------------FGSAKK--LSPSEPNV---------AY 191

Query: 307 VGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFA----------------AP 349
           + +  Y +PE+  G  H   AVD W+ G    EM+ G   F                  P
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251

Query: 350 SNET-----------TLRNIVKKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS 396
           S E             L N    P +  F   S     E  A DL+S LL   P  R+  
Sbjct: 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKE--AYDLLSALLQYLPEERM-- 307

Query: 397 KRGAADVKTHPFFKGL 412
                +   HP+F  L
Sbjct: 308 --KPYEALCHPYFDEL 321

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 72.8 bits (179), Expect = 4e-14
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 21/161 (13%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              L +++GAG  G V++ + N   +           A+K +    +  +  +     E 
Sbjct: 189 SLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMKPGSMSVEAFLA----EA 234

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YA 197
            ++K L H  L  L+A         I+ EF + G L   L+     +       +   ++
Sbjct: 235 NVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKS---DEGSKQPLPKLIDFS 290

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A++   + ++     I+RDL+  N+LV +     ++DF L+
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 16/159 (10%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             R IG G  G VY     ++    +    C   A+K +++    ++ +    E    ++
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQ---AQNRIQC---AIKSLSRITEMQQVEAFLREGL--LM 76

Query: 144 KMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YAAE 199
           + L+HP +  L            +++ +   GDL   +R  Q +     T      +  +
Sbjct: 77  RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN----PTVKDLISFGLQ 132

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           V   +EYL     ++RDL   N ++     + ++DF L+
Sbjct: 133 VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA 171

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 73.0 bits (179), Expect = 5e-14
 Identities = 73/376 (19%), Positives = 123/376 (32%), Gaps = 118/376 (31%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +   + IG+G  G V  C+  +              A+K +++   + +    RA  E
Sbjct: 62  KRYQNLKPIGSGAQGIV--CAAYDAVLDRN-------VAIKKLSR-PFQNQTHAKRAYRE 111

Query: 140 KKILKMLDHPFLPTLY----AEFEASNFSCI--VMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             ++K ++H  + +L      +     F  +  VME     +L  +   +          
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME----LDHERM 166

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
            +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+               
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------- 211

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                       R   T                 +TP               +V T  Y 
Sbjct: 212 ------------RTAGTS--------------FMMTP---------------YVVTRYYR 230

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----------------PSNET---- 353
           +PEV  G  +   VD W+ G  + EM+  +  F                  P  E     
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290

Query: 354 ---------TLRNIVKKPLT--FPTQSPSSMSEY------HARDLISGLLNKDPCNRLGS 396
                                 FP     + SE+       ARDL+S +L  DP  R+  
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI-- 348

Query: 397 KRGAADVKTHPFFKGL 412
                D   HP+    
Sbjct: 349 --SVDDALQHPYINVW 362

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 72.3 bits (178), Expect = 5e-14
 Identities = 62/320 (19%), Positives = 97/320 (30%), Gaps = 112/320 (35%)

Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHKQP----H 185
           R   E KIL    H  +  +     A          IV +     DL+ L   Q     H
Sbjct: 71  RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDH 129

Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
             + L     Y  ++L  L+Y+H   +++RDLKP N+L+ +   + + DF L+       
Sbjct: 130 ICYFL-----Y--QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA------- 175

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                               R                        +  F+ E VA R   
Sbjct: 176 --------------------RVADPD-----------------HDHTGFLTEYVATRW-- 196

Query: 306 FVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA---------------- 348
                 Y +PE+         ++D W+ G  + EM+  R  F                  
Sbjct: 197 ------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250

Query: 349 PSNET--------------TLRNIVKKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCN 392
           PS E               +L +  K P    FP           A DL+  +L  +P  
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS------KALDLLDKMLTFNPHK 304

Query: 393 RLGSKRGAADVKTHPFFKGL 412
           R+           HP+ +  
Sbjct: 305 RI----EVEQALAHPYLEQY 320

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 11/159 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +    + +G+G  GTV+      +   +    P     +KV+  +   +  +     M  
Sbjct: 14  ELRKLKVLGSGVFGTVHKGVWIPE--GESIKIPV---CIKVIEDKSGRQSFQAVTDHML- 67

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
             +  LDH  +  L      S+   +V ++   G L   +R  +            +  +
Sbjct: 68  -AIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQ 123

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   + YL   G+++R+L   NVL++S   + ++DF ++
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 71.5 bits (176), Expect = 6e-14
 Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 20/166 (12%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE--MEKK 141
           L + +G G+ G+V   +L  +   D         A+K +  +   +++     E   E  
Sbjct: 38  LGKILGEGEFGSVMEGNLKQE---DGTSLKV---AVKTMKLDNSSQRE---IEEFLSEAA 88

Query: 142 ILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHS-LRHKQPH-KRFSLTSAR 194
            +K   HP +  L         +      +++ F   GDLH+ L + +       +    
Sbjct: 89  CMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQT 148

Query: 195 F--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              +  ++ + +EYL     ++RDL   N ++R D  + ++DF LS
Sbjct: 149 LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L   +G G  G V+L   +N        +   L A+K + KE  E  ++  + E E  +L
Sbjct: 45  LKWELGEGAFGKVFLAECHNL----LPEQDKMLVAVKAL-KEASESARQDFQREAE--LL 97

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF----------SLTS 192
            ML H  +   +          +V E+   GDL+  LR   P  +            L  
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157

Query: 193 ARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +    A++V   + YL  L  ++RDL   N LV     + + DF +S
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 70.7 bits (174), Expect = 7e-14
 Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 17/159 (10%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              L  R+GAG  G V++   N   +           A+K + +  +     +     E 
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDAFL----AEA 59

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            ++K L H  L  LYA         I+ E+   G L   L+     K  ++      AA+
Sbjct: 60  NLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQ 117

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   + ++     I+RDL+  N+LV       ++DF L+
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D  +  ++G G  G VY                    A+K + ++ +E ++ +     E 
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKY------SLTV---AVKTLKEDTMEVEEFLK----EA 267

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            ++K + HP L  L           I+ EF + G+L   LR     +  S     + A +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQ 326

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +  A+EYL     I+R+L   N LV  +  + ++DF LS
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 12/157 (7%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
            +  IG G  G VY  +L +    D     C   A+K +N+     +      E    I+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDN---DGKKIHC---AVKSLNRITDIGEVSQFLTEGI--IM 144

Query: 144 KMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVL 201
           K   HP + +L      +     +V+ +   GDL + +R++  +   ++     +  +V 
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVA 202

Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             +++L     ++RDL   N ++     + ++DF L+
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 71.8 bits (176), Expect = 1e-13
 Identities = 72/394 (18%), Positives = 124/394 (31%), Gaps = 82/394 (20%)

Query: 13  ATTRTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFG 72
            ++   + A   +  ++   S S+   +      S +  +  P   SD+           
Sbjct: 1   GSSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIP-------- 52

Query: 73  RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
                    +++   IG G  G V  C   +K  +          A+K + + V E    
Sbjct: 53  -------DRYEIRHLIGTGSYGHV--CEAYDKLEKRV-------VAIKKILR-VFEDLID 95

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHS-LRHKQP-- 184
             R   E  IL  L+H  +  +       +        +V+E     D     R      
Sbjct: 96  CKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLT 154

Query: 185 --HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
             H +  L     Y   +LV ++Y+H  GI++RDLKP N LV  D  + + DF L     
Sbjct: 155 ELHIKTLL-----Y--NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL----- 202

Query: 243 AIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
                   A + +     +              +         + LT             
Sbjct: 203 --------ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLT------------- 241

Query: 303 SCSFVGTHEYVSPEVASGGSH-GNAVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVK 360
               V T  Y +PE+     +   A+D W+ G IF  E++           E    +  +
Sbjct: 242 --GHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA-ELL-------NMIKENVAYHADR 291

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
            PL FP  S   +S             +   ++L
Sbjct: 292 GPL-FPGSSCFPLSPDQKAGNDFKFHTRGNRDQL 324

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 14/163 (8%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L R +G G  G VY   ++     D         A+K + +   E+ +     E    I+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSG-MPNDPSPLQV---AVKTLPEVCSEQDELDFLMEAL--II 87

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPH--KRFSLTSARF--YAA 198
              +H  +         S    I+ME  +GGDL S LR  +P   +  SL        A 
Sbjct: 88  SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML---SDFDLS 238
           ++    +YL     I+RD+   N L+   G   +    DF ++
Sbjct: 148 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 11/159 (6%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F   + +G+G  GTVY      +   ++   P    A+K + +    K  K    E   
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPV---AIKELREATSPKANKEILDEAY- 69

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAE 199
            ++  +D+P +  L      S    ++ +    G L   +R  + +          +  +
Sbjct: 70  -VMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQ 125

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +   + YL    +++RDL   NVLV++  H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 21/161 (13%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              L  ++G G  G V++ + N   R           A+K +    +  +  +     E 
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEAFL----QEA 313

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF--YA 197
           +++K L H  L  LYA         IV E+ S G L   L+         L   +    A
Sbjct: 314 QVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG---ETGKYLRLPQLVDMA 369

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           A++   + Y+  +  ++RDL+  N+LV  +    ++DF L+
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 27/169 (15%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR- 135
           + +R +++ + IG G  G V           D         A+K+V       +K+ HR 
Sbjct: 95  VAYR-YEVLKVIGKGSFGQVVKA-------YDHKVH--QHVALKMVRN-----EKRFHRQ 139

Query: 136 AEMEKKILKML-------DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
           A  E +IL+ L           +  +   F   N  C+  E  S  +L+ L  K   + F
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVI-HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGF 197

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--IMLSDF 235
           SL   R +A  +L  L+ LH   II+ DLKPEN+L++  G   I + DF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L R +G G  G V+L    N        +   L A+K + K+     +K  + E E  +L
Sbjct: 19  LKRELGEGAFGKVFLAECYNL----SPTKDKMLVAVKAL-KDPTLAARKDFQREAE--LL 71

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-----------SLT 191
             L H  +   Y      +   +V E+   GDL+  LR   P                L 
Sbjct: 72  TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131

Query: 192 SARFY--AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            ++    A+++   + YL     ++RDL   N LV ++  + + DF +S
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 14/163 (8%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L R +G G  G VY   ++               A+K + +   E+ +     E    I+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGM----PNDPSPLQVAVKTLPEVCSEQDELDFLMEAL--II 128

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPH--KRFSLTSARF--YAA 198
              +H  +         S    I++E  +GGDL S LR  +P   +  SL        A 
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML---SDFDLS 238
           ++    +YL     I+RD+   N L+   G   +    DF ++
Sbjct: 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
             +G G+ G+V        YR  +        A+KV+ +   +   +      E +I+  
Sbjct: 16  IELGCGNFGSVRQ----GVYRMRKKQIDV---AIKVLKQGTEKADTE--EMMREAQIMHQ 66

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVAL 204
           LD+P++  L    +A     +VME   GG LH  L  K+      +++      +V + +
Sbjct: 67  LDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGM 123

Query: 205 EYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +YL     ++RDL   NVL+ +  +  +SDF LS
Sbjct: 124 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 19/161 (11%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           ++  L + IG G+ G V L                   A+K +  +   +      AE  
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNK-----------VAVKCIKNDATAQA---FLAEAS 66

Query: 140 KKILKMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYA 197
             ++  L H  L  L     E      IV E+ + G L   LR +             ++
Sbjct: 67  --VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFS 123

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            +V  A+EYL     ++RDL   NVLV  D    +SDF L+
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 28/177 (15%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             R IG G  G V+             +EP  + A+K++ +E     +   + E    ++
Sbjct: 51  YVRDIGEGAFGRVFQARAPGL----LPYEPFTMVAVKMLKEEASADMQADFQREAA--LM 104

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-------------- 188
              D+P +  L          C++ E+ + GDL+  LR   PH                 
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164

Query: 189 -----SLTSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                 L+ A     A +V   + YL     ++RDL   N LV  +  + ++DF LS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 221

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 22/171 (12%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L + +G G  G V                 C   A+K++ +     + +   +E++  IL
Sbjct: 31  LGKPLGRGAFGQVIEADAFG----IDKTATCRTVAVKMLKEGATHSEHRALMSELK--IL 84

Query: 144 KMLD-HPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-----------S 189
             +  H  +  L     +      +++EFC  G+L + LR K+                 
Sbjct: 85  IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144

Query: 190 LTSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           LT      Y+ +V   +E+L     I+RDL   N+L+     + + DF L+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 30/178 (16%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L + +G G+ G V            +G       A+K++ +     + +   +E    +L
Sbjct: 27  LGKTLGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN--VL 80

Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF------- 195
           K ++HP +  LY          +++E+   G L   LR  +      L S          
Sbjct: 81  KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140

Query: 196 --------------YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS 238
                         +A ++   ++YL  + +++RDL   N+LV ++G  M +SDF LS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLS 197

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 68.4 bits (167), Expect = 2e-12
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 87  RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML 146
            +G G+ G+V        YR  +        A+KV+ +   +   +    E   +I+  L
Sbjct: 343 ELGCGNFGSVRQ----GVYRMRKKQIDV---AIKVLKQGTEKADTEEMMREA--QIMHQL 393

Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVLVALE 205
           D+P++  L    +A     +VME   GG LH  L  K+      +++      +V + ++
Sbjct: 394 DNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMK 450

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           YL     ++R+L   NVL+ +  +  +SDF LS
Sbjct: 451 YLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 27/170 (15%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR- 135
              R +++   IG G  G V           DR  +     A+K++       KK     
Sbjct: 52  WMDR-YEIDSLIGKGSFGQVVKA-------YDRVEQ--EWVAIKIIKN-----KKAFLNQ 96

Query: 136 AEMEKKILKML------DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
           A++E ++L+++         ++  L   F   N  C+V E  S  +L+ L      +  S
Sbjct: 97  AQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVS 155

Query: 190 LTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRSDGH--IMLSDF 235
           L   R +A ++  AL +L    L II+ DLKPEN+L+ +     I + DF
Sbjct: 156 LNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.8 bits (161), Expect = 8e-12
 Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 23/162 (14%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE--M 138
           +  L + IG G+ G V L                     KV  K +   K          
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYRGN---------------KVAVKCI---KNDATAQAFLA 235

Query: 139 EKKILKMLDHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFY 196
           E  ++  L H  L  L     E      IV E+ + G L   LR +             +
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKF 294

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           + +V  A+EYL     ++RDL   NVLV  D    +SDF L+
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 32/197 (16%)

Query: 51  LSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRG 110
           +  +  R ++F    I  +TF        + +   + IG+G  G V  C+  +   +   
Sbjct: 1   MGSRSKRDNNFYSVEIGDSTF-----TVLKRYQNLKPIGSGAQGIV--CAAYDAILERN- 52

Query: 111 HEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY----AEFEASNFSCI 166
                  A+K +++   + +    RA  E  ++K ++H  +  L      +     F  +
Sbjct: 53  ------VAIKKLSR-PFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105

Query: 167 --VMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
             VME     +L  +   +       + L     Y  ++L  +++LH  GII+RDLKP N
Sbjct: 106 YIVMELM-DANLCQVIQMELDHERMSYLL-----Y--QMLCGIKHLHSAGIIHRDLKPSN 157

Query: 222 VLVRSDGHIMLSDFDLS 238
           ++V+SD  + + DF L+
Sbjct: 158 IVVKSDCTLKILDFGLA 174

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 32/144 (22%), Positives = 44/144 (30%), Gaps = 41/144 (28%)

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----------------P 349
           +V T  Y +PEV  G  +   VD W+ G  + EMI G   F                  P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245

Query: 350 SNET-------------TLRNIVKKPLT--FPTQSPSSMSEY------HARDLISGLLNK 388
             E                           FP     + SE+       ARDL+S +L  
Sbjct: 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305

Query: 389 DPCNRLGSKRGAADVKTHPFFKGL 412
           D   R+       +   HP+    
Sbjct: 306 DASKRI----SVDEALQHPYINVW 325

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 25/173 (14%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             + +GAG  G V   +           +     A+K++       +++   +E++  +L
Sbjct: 27  FGKTLGAGAFGKVVEATAYGL----IKSDAAMTVAVKMLKPSAHLTEREALMSELK--VL 80

Query: 144 KML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARF------ 195
             L +H  +  L         + ++ E+C  GDL + LR K+     S TS         
Sbjct: 81  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140

Query: 196 ---------YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS 238
                    ++ +V   + +L     I+RDL   N+L+ + G I  + DF L+
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL-THGRITKICDFGLA 192

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 49/238 (20%), Positives = 90/238 (37%), Gaps = 30/238 (12%)

Query: 16  RTTSTANSSSMSSESCSSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKT 75
           R  + +  SS S  S +   R++  L ++  +P    +     S++         F R  
Sbjct: 28  RQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGV-----SEYELPEDPKWEFPRD- 81

Query: 76  GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR 135
                   L + +G G  G V +       +           A+K++  +  EK      
Sbjct: 82  -----KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTV--AVKMLKDDATEKDLSDLV 134

Query: 136 AEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF----- 188
           +EME  ++KM+  H  +  L           +++E+ S G+L   LR ++P         
Sbjct: 135 SEME--MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 192

Query: 189 ------SLTSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                  +T         ++   +EYL     I+RDL   NVLV  +  + ++DF L+
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 64.8 bits (158), Expect = 2e-11
 Identities = 70/359 (19%), Positives = 114/359 (31%), Gaps = 138/359 (38%)

Query: 124 KEVLEKKKKVHRAEMEKKILKMLDHP--------FLPTLYAEFEASNFSC---------- 165
           K+VL+  +  +R   E  I+K+LDH         F  T   E +                
Sbjct: 38  KKVLQDPRYKNR---ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNN 94

Query: 166 --------------------IVMEFCSGGDLHSLRHKQPHKRFSLTSA--RFYAAEVLVA 203
                               ++ME+     LH +         S+       Y  ++  A
Sbjct: 95  GVNNHHKSVIVNPSQNKYLNVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153

Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQT 263
           + ++H LGI +RD+KP+N+LV S  +       L LC                       
Sbjct: 154 VGFIHSLGICHRDIKPQNLLVNSKDN------TLKLCD---------------------- 185

Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
                           FGS K   L P+   V         +++ +  Y +PE+  G + 
Sbjct: 186 ----------------FGSAKK--LIPSEPSV---------AYICSRFYRAPELMLGATE 218

Query: 324 -GNAVDWWAFGIFIYEMIYGRTPFA----------------APSNET-----------TL 355
              ++D W+ G    E+I G+  F+                 P+ E              
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRF 278

Query: 356 RNIVKKPLT--FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             +  K      P  +PS      A DL+  +L  +P  R+       +   HPFF  L
Sbjct: 279 PTLKAKDWRKILPEGTPSL-----AIDLLEQILRYEPDLRI----NPYEAMAHPFFDHL 328

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 28/169 (16%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
             +   + +G+G  G V  CS  +     +        A+K + +   + +    RA  E
Sbjct: 25  AVYRDLQPVGSGAYGAV--CSAVDGRTGAK-------VAIKKLYR-PFQSELFAKRAYRE 74

Query: 140 KKILKMLDHPFLPTLY----AEFEASNFSCI--VMEFCSGGDLHSLRHKQP----HKRFS 189
            ++LK + H  +  L      +    +F+    VM F  G DL  L   +       +F 
Sbjct: 75  LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL 133

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +     Y  ++L  L Y+H  GII+RDLKP N+ V  D  + + DF L+
Sbjct: 134 V-----Y--QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 35/150 (23%), Positives = 48/150 (32%), Gaps = 48/150 (32%)

Query: 301 ARSCS-----FVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA------ 348
           AR        +V T  Y +PEV          VD W+ G  + EMI G+T F        
Sbjct: 175 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234

Query: 349 ----------PSNET--------------TLRNIVKKPLT--FPTQSPSSMSEYHARDLI 382
                     P  E                L  + KK         SP       A +L+
Sbjct: 235 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP------LAVNLL 288

Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             +L  D   R+     A +   HP+F+ L
Sbjct: 289 EKMLVLDAEQRV----TAGEALAHPYFESL 314

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
             +     +G+G  G+V  C+  +     R        A+K +++   +      R   E
Sbjct: 29  ERYQNLSPVGSGAYGSV--CAAFDTKTGLR-------VAVKKLSR-PFQSIIHAKRTYRE 78

Query: 140 KKILKMLDHPFLPTLY----AEFEASNFSCI--VMEFCSGGDLHSLRHKQP----HKRFS 189
            ++LK + H  +  L            F+ +  V     G DL+++   Q     H +F 
Sbjct: 79  LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL 137

Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +     Y  ++L  L+Y+H   II+RDLKP N+ V  D  + + DF L+
Sbjct: 138 I-----Y--QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 33/151 (21%), Positives = 47/151 (31%), Gaps = 50/151 (33%)

Query: 301 ARSCSFVGTHEYVS------PEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA----- 348
           AR  +   T  YV+      PE+     H    VD W+ G  + E++ GRT F       
Sbjct: 179 ARHTADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237

Query: 349 -----------PSNET--------------TLRNIVKKPLT--FPTQSPSSMSEYHARDL 381
                      P  E               +L  + K      F   +P       A DL
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP------LAVDL 291

Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
           +  +L  D   R+     AA    H +F   
Sbjct: 292 LEKMLVLDSDKRI----TAAQALAHAYFAQY 318

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 46/220 (20%), Positives = 79/220 (35%), Gaps = 49/220 (22%)

Query: 32  SSFSRLSFELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAG 91
           S +S+ +  +  + SS   +  + +R        +  AT          +FD    IG G
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYR---VPLVDLEEAT---------NNFDHKFLIGHG 50

Query: 92  DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR---AEMEKKILKMLDH 148
             G VY   L +                KV  K    +  +       E+E   L    H
Sbjct: 51  VFGKVYKGVLRDG--------------AKVALKRRTPESSQGIEEFETEIE--TLSFCRH 94

Query: 149 PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT----------SARFYAA 198
           P L +L    +  N   ++ ++   G+L    +       S++          +AR    
Sbjct: 95  PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR---- 150

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                L YLH   II+RD+K  N+L+  +    ++DF +S
Sbjct: 151 ----GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 63.1 bits (154), Expect = 4e-11
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 19/170 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L + +G G  G V +       +           A+K++  +  EK      +EME  ++
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTV--AVKMLKDDATEKDLSDLVSEME--MM 94

Query: 144 KML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF-----------SL 190
           KM+  H  +  L           +++E+ S G+L   LR ++P                +
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 191 TSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           T         ++   +EYL     I+RDL   NVLV  +  + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 62.7 bits (153), Expect = 5e-11
 Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 21/169 (12%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             + +GAG  G V               +     A+K++       +K+   +E+  KI+
Sbjct: 50  FGKTLGAGAFGKVVEA----TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL--KIM 103

Query: 144 KMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF---------SLTS 192
             L  H  +  L           ++ E+C  GDL + LR K               + ++
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163

Query: 193 ARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS 238
                ++++V   + +L     I+RD+   NVL+ ++GH+  + DF L+
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 211

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 62.3 bits (152), Expect = 6e-11
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 24/170 (14%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
               IG G+ G V    +      D         A+K + +   +   +    E+E  +L
Sbjct: 29  FQDVIGEGNFGQVLKARIKK----DGLRMDA---AIKRMKEYASKDDHRDFAGELE--VL 79

Query: 144 KML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVL 201
             L  HP +  L    E   +  + +E+   G+L   LR  +  +     +     A  L
Sbjct: 80  CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139

Query: 202 -----------VA--LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                      VA  ++YL     I+RDL   N+LV  +    ++DF LS
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 62.3 bits (152), Expect = 7e-11
 Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 29/174 (16%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK------KKV 133
             + + R I +G  G V  C+  +              A+K V   V + +         
Sbjct: 22  SPYTVQRFISSGSYGAV--CAGVDSEGIP--------VAIKRVFNTVSDGRTVNILSDSF 71

Query: 134 H--RAEMEKKILKMLDHPFLPTLYAEFEASNFSC-----IVMEFCSGGDLHSLRHKQPHK 186
              R   E ++L    HP +  L   F            +V E     DL  + H Q   
Sbjct: 72  LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ--- 127

Query: 187 RFSLTSA--RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           R  ++    +++   +L+ L  LH  G+++RDL P N+L+  +  I + DF+L+
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 19/170 (11%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L + +G G  G V L       +           A+K++  +  EK      +EME  ++
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKV--AVKMLKSDATEKDLSDLISEME--MM 128

Query: 144 KML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPH-----------KRFSL 190
           KM+  H  +  L           +++E+ S G+L   L+ ++P                L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 191 TSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           +S      A +V   +EYL     I+RDL   NVLV  D  + ++DF L+
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +     +G+G  G+V  CS  +K   ++        A+K +++   + +    RA  E
Sbjct: 24  KTYVSPTHVGSGAYGSV--CSAIDKRSGEK-------VAIKKLSR-PFQSEIFAKRAYRE 73

Query: 140 KKILKMLDHPFLPTLY----AEFEASNFSCI--VMEFCSGGDLHSLRHKQ---PHKRFSL 190
             +LK + H  +  L           NF     VM F    DL  +   +      ++ +
Sbjct: 74  LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYLV 132

Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                Y  ++L  L+Y+H  G+++RDLKP N+ V  D  + + DF L+
Sbjct: 133 -----Y--QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 41/150 (27%), Positives = 52/150 (34%), Gaps = 48/150 (32%)

Query: 301 ARSCS-----FVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAA------ 348
           AR        +V T  Y +PEV     H    VD W+ G  + EM+ G+T F        
Sbjct: 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232

Query: 349 ----------PSNET--------------TLRNIVKKPLT--FPTQSPSSMSEYHARDLI 382
                     P  E               +L    +K  T  FP  SP       A DL+
Sbjct: 233 LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP------QAADLL 286

Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             +L  D   RL     AA   THPFF+  
Sbjct: 287 EKMLELDVDKRL----TAAQALTHPFFEPF 312

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 59.2 bits (144), Expect = 8e-10
 Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 30/178 (16%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             + +G+G  G V   +                 A+K++ ++    +++   +E++  ++
Sbjct: 49  FGKVLGSGAFGKVMNATAYGI----SKTGVSIQVAVKMLKEKADSSEREALMSELK--MM 102

Query: 144 KML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFS------------ 189
             L  H  +  L      S    ++ E+C  GDL + LR K+                  
Sbjct: 103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162

Query: 190 ------LTSARF--YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLS 238
                 LT      +A +V   +E+L     ++RDL   NVLV + G ++ + DF L+
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLA 219

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 60/320 (18%), Positives = 108/320 (33%), Gaps = 98/320 (30%)

Query: 39  FELPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYL 98
           F++P ++  PE    +  R   F+   ++ A+          +F     +G G  G VY 
Sbjct: 2   FDVP-AEEDPEVHLGQLKR---FSLRELQVAS---------DNFSNKNILGRGGFGKVYK 48

Query: 99  CSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY--- 155
             L +      G       A+K + +E  +  +   + E+E  ++ M  H  L  L    
Sbjct: 49  GRLAD------GTL----VAVKRLKEERTQGGELQFQTEVE--MISMAVHRNLLRLRGFC 96

Query: 156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT-SARFY----AAEVLVALEYLH-- 208
                     +V  + + G + S   ++P  +  L    R      +A     L YLH  
Sbjct: 97  MT---PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR---GLAYLHDH 150

Query: 209 -MLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIPAVESPASSPEAASPRSQTYTR 266
               II+RD+K  N+L+  +   ++ DF L+ L                       T+  
Sbjct: 151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL------------------MDYKDTHV- 191

Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNA 326
             +T                                     GT  +++PE  S G     
Sbjct: 192 --TTA----------------------------------VRGTIGHIAPEYLSTGKSSEK 215

Query: 327 VDWWAFGIFIYEMIYGRTPF 346
            D + +G+ + E+I G+  F
Sbjct: 216 TDVFGYGVMLLELITGQRAF 235

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 40/206 (19%), Positives = 75/206 (36%), Gaps = 46/206 (22%)

Query: 49  ENLSLKPHRSSDFAYSAIRSAT--FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYR 106
           ++L +   R   F++  +++ T  F  +      +      +G G  G VY   +NN   
Sbjct: 3   KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNK-----MGEGGFGVVYKGYVNNT-- 55

Query: 107 QDRGHEPCCLYAMKVVNKEVLEKKKKVHR---AEMEKKILKMLDHPFLPTLY---AEFEA 160
                      A+K +   V    +++ +    E++  ++    H  L  L    ++   
Sbjct: 56  ---------TVAVKKLAAMVDITTEELKQQFDQEIK--VMAKCQHENLVELLGFSSD--- 101

Query: 161 SNFSCIVMEFCSGGD----LHSLRHKQP---HKRFS--LTSARFYAAEVLVALEYLHMLG 211
            +  C+V  +   G     L  L    P   H R      +A          + +LH   
Sbjct: 102 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN--------GINFLHENH 153

Query: 212 IIYRDLKPENVLVRSDGHIMLSDFDL 237
            I+RD+K  N+L+       +SDF L
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGL 179

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 53.3 bits (127), Expect = 7e-08
 Identities = 34/203 (16%), Positives = 57/203 (28%), Gaps = 59/203 (29%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVV-----NKEVLEKKKKVHR 135
                 +IG G  G V+    ++              A+K++     +      +K    
Sbjct: 21  KLQRCEKIGEGVFGEVFQTIADHT-----------PVAIKIIAIEGPDLVNGSHQKTFEE 69

Query: 136 AEMEKKILKMLDH--------------------------PFLPTLYAEFEASNFSC---- 165
              E  I K L                            P L   +  + ++  S     
Sbjct: 70  ILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRP 129

Query: 166 ---------IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYR 215
                    IV+EF  GG       +   K  SL +A+    ++  +L      L   +R
Sbjct: 130 DFFKDDQLFIVLEFEFGGIDL---EQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHR 186

Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
           DL   NVL++      L      
Sbjct: 187 DLHWGNVLLKKTSLKKLHYTLNG 209

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 50.3 bits (120), Expect = 6e-07
 Identities = 55/304 (18%), Positives = 104/304 (34%), Gaps = 44/304 (14%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
           L + +G G  G V                 C   A+K++ +     + +   +E+  KIL
Sbjct: 26  LGKPLGRGAFGQVIEADAFGI----DKTATCRTVAVKMLKEGATHSEHRALMSEL--KIL 79

Query: 144 KMLD-HPFLPTLY-AEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEV 200
             +  H  +  L  A  +      +++EFC  G+L + LR K+       T    +    
Sbjct: 80  IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFR--- 136

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
               +    +G I  DLK     + S      S F      + +   E+P    +     
Sbjct: 137 ----QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 192

Query: 261 SQ--TYTRQYSTRLSRFLNRFFGSKKI--QTLTPNRLFVAEPVAARSCSF------VGTH 310
                Y+ Q +  +      F  S+K   + L    + ++E    + C F          
Sbjct: 193 EHLICYSFQVAKGME-----FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247

Query: 311 EYV------------SPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRN 357
           +YV            +PE      +    D W+FG+ ++E+   G +P+     +     
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307

Query: 358 IVKK 361
            +K+
Sbjct: 308 RLKE 311

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282

 Score = 46.9 bits (111), Expect = 6e-06
 Identities = 49/275 (17%), Positives = 86/275 (31%), Gaps = 49/275 (17%)

Query: 33  SFSRLSFE-LPTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDF-------DL 84
           S +R+  E          +L +  +R  D+  S     TF   +  +            +
Sbjct: 38  SHARIGEEKARNILKYLSDLRVVQNRQKDYEGSTF---TFIGLSLYSLHRLVRSGKVDAI 94

Query: 85  HRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHR----AEME 139
            + +G G    V+ C S        + H+       KV  K               A  E
Sbjct: 95  GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 154

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            + L+ L    +P +YA       + ++ME     +L+ +R + P +             
Sbjct: 155 FRALQKLQGLAVPKVYAWEG----NAVLMELIDAKELYRVRVENPDE---------VLDM 201

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           +L  +   +  GI++ DL   NVLV S+  I + DF  S+                    
Sbjct: 202 ILEEVAKFYHRGIVHGDLSQYNVLV-SEEGIWIIDFPQSV----------EVGEEGW--- 247

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
                 R+   R  R +  +F          N   
Sbjct: 248 ------REILERDVRNIITYFSRTYRTEKDINSAI 276

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 64/448 (14%), Positives = 122/448 (27%), Gaps = 132/448 (29%)

Query: 3   IDSDFEPP--SDATTRTTSTANSSSMSSESC-------SSFSRLSFELPTSKSSPENL-- 51
           I S FE     +   +       S +S E          + S       T  S  E +  
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80

Query: 52  -----SLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDI-----GTVY---- 97
                 L+   +  F  S I++    R+  +  R +   R     D        V     
Sbjct: 81  KFVEEVLRI--NYKFLMSPIKTEQ--RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136

Query: 98  LCSLNNKYRQDRGHEPCCLYAMKVVNK-----EVLEKKK-------KVH-----RAEMEK 140
              L     + R  +   +  +    K     +V    K       K+           +
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L+ML       L  + + +        + S  D HS   K       + S +     +
Sbjct: 197 TVLEMLQ-----KLLYQIDPN--------WTSRSD-HSSNIKLR-----IHSIQAELRRL 237

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC--------SNAIPAVESPAS 252
           L +  Y + L ++  +       V++      + F+LS C              + +  +
Sbjct: 238 LKSKPYENCL-LVLLN-------VQNAKAW--NAFNLS-CKILLTTRFKQVTDFLSAATT 286

Query: 253 SPEAASPRSQTYTRQYSTRL-SRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
           +  +    S T T      L  ++L+      + Q L         P    +        
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLD-----CRPQDL---------PREVLT-------- 324

Query: 312 YVSPEVAS--GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
             +P   S    S  + +  W      ++ +          N   L  I++  L      
Sbjct: 325 -TNPRRLSIIAESIRDGLATWDN----WKHV----------NCDKLTTIIESSLN--VLE 367

Query: 370 PSSMSEYHARDLISGLLNKD---PCNRL 394
           P+   +     L   +       P   L
Sbjct: 368 PAEYRKMF-DRL--SVFPPSAHIPTILL 392

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	451
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.93
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.85
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.78
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.46
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.34
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.27
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.15
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.9
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.75
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.71
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.61
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.39
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.33
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.32
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.32
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.0
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.83
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.79
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.72
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.68
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.52
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.48
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.47
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.45
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.39
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.35
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.02
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.97
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.87
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.25
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.94
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	93.74
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	92.14
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	87.89

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.3e-67  Score=506.89  Aligned_cols=273  Identities=37%  Similarity=0.631  Sum_probs=243.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+.+|+++|++++|||||+++++|+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~---------~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~  102 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSR---------EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ  102 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCC---------EEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            679999999999999999999988776         49999999887666666788899999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+
T Consensus       103 ~~~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~  180 (311)
T 4aw0_A          103 DDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK  180 (311)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence            999999999999999999999875  569999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                     +.......+++||+.|||||++.
T Consensus       181 ~~~~-----------------------------------------------------~~~~~~~~~~~GTp~YmAPEvl~  207 (311)
T 4aw0_A          181 VLSP-----------------------------------------------------ESKQARANSFVGTAQYVSPELLT  207 (311)
T ss_dssp             ECCT-----------------------------------------------------TTTCCCBCCCCSCGGGCCHHHHH
T ss_pred             ecCC-----------------------------------------------------CCCcccccCcccCcccCCHHHHc
Confidence            4321                                                     11122334579999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..|+.++|||||||++|+|++|+.||.+.+..+.+.++..+.+.++...     +.++++||.+||++||++|||    
T Consensus       208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~dli~~lL~~dp~~R~t----  278 (311)
T 4aw0_A          208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKF-----FPKARDLVEKLLVLDATKRLG----  278 (311)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTC-----CHHHHHHHHHHSCSSGGGSTT----
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccc-----CHHHHHHHHHHccCCHhHCcC----
Confidence            99999999999999999999999999999999999999999887766533     338999999999999999999    


Q ss_pred             hHH------HHcCCCcCCCCcccccccCCCCC
Q 013016          400 AAD------VKTHPFFKGLNFALIRSLTPPEI  425 (451)
Q Consensus       400 ~~e------ll~hp~~~~~~~~~~~~~~~~~~  425 (451)
                      ++|      |++||||++++|..+.+..||.+
T Consensus       279 ~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l  310 (311)
T 4aw0_A          279 CEEMEGYGPLKAHPFFESVTWENLHQQTPPKL  310 (311)
T ss_dssp             SGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred             hHHHcCCHHHHCCCCcCCCCHHHhcCCCCCCC
Confidence            665      69999999999998887777654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5e-65  Score=488.67  Aligned_cols=279  Identities=37%  Similarity=0.694  Sum_probs=233.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||+||+|++..+.      ..+..||||++.+..... .....+.+|+.+|++++|||||+++++|
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~------~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~   95 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGS------DARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAF   95 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSST------TTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCC------CCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            368999999999999999999875432      122369999997653322 2234567799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++.+|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|
T Consensus        96 ~~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A           96 QTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             EETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             EECCEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccc
Confidence            9999999999999999999999875  56999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +....                                                       ......+++||+.|||||++
T Consensus       174 ~~~~~-------------------------------------------------------~~~~~~~~~GT~~YmAPE~~  198 (304)
T 3ubd_A          174 KESID-------------------------------------------------------HEKKAYSFCGTVEYMAPEVV  198 (304)
T ss_dssp             EC------------------------------------------------------------CCCCSCCCCGGGCCHHHH
T ss_pred             eeccC-------------------------------------------------------CCccccccccCcccCCHHHh
Confidence            53211                                                       01122346899999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC-
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~-  397 (451)
                      .+..|+.++|||||||++|||+||+.||.+.+..+.+..+.+....+|..     .+.++++||.+||++||++|||++ 
T Consensus       199 ~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~~L~~dP~~R~ta~~  273 (304)
T 3ubd_A          199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-----LSPEAQSLLRMLFKRNPANRLGAGP  273 (304)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSSGGGSTTCST
T ss_pred             ccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCc-----CCHHHHHHHHHHcccCHHHCCCCCc
Confidence            99999999999999999999999999999999999999999887766543     334899999999999999999953 


Q ss_pred             CChHHHHcCCCcCCCCcccc--cccCCCCCC
Q 013016          398 RGAADVKTHPFFKGLNFALI--RSLTPPEIP  426 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~--~~~~~~~~p  426 (451)
                      ..++|+++||||++++|..+  +.+.||++|
T Consensus       274 ~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          274 DGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             TTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            34689999999999999755  778888887

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.5e-63  Score=486.27  Aligned_cols=260  Identities=25%  Similarity=0.425  Sum_probs=222.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|+++++||+|+||+||+|+++.+++         .||||++.+.... ....+.+.+|+.+|++++|||||+++++|
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~---------~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~   92 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGR---------QYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESF   92 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCC---------EEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCC---------EEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEE
Confidence            3789999999999999999999987765         4999999865433 23456788899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ++++.+|||||||+||+|.+++.......+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|
T Consensus        93 ~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  172 (350)
T 4b9d_A           93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA  172 (350)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccc
Confidence            99999999999999999999998877777899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +....                                                       ......+++||+.|||||++
T Consensus       173 ~~~~~-------------------------------------------------------~~~~~~~~~GT~~YmAPE~l  197 (350)
T 4b9d_A          173 RVLNS-------------------------------------------------------TVELARACIGTPYYLSPEIC  197 (350)
T ss_dssp             SCCCH-------------------------------------------------------HHHHHHHHHSCCTTCCHHHH
T ss_pred             eeecC-------------------------------------------------------CcccccccCCCccccCHHHH
Confidence            53210                                                       01112245899999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..|+.++|||||||+||||+||+.||.+.+..+.+.++..+.....   + ...+.++++||.+||++||++|||   
T Consensus       198 ~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~---~-~~~s~~~~~li~~~L~~dP~~R~s---  270 (350)
T 4b9d_A          198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV---S-LHYSYDLRSLVSQLFKRNPRDRPS---  270 (350)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---C-TTSCHHHHHHHHHHTCSSGGGSCC---
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC---C-ccCCHHHHHHHHHHccCChhHCcC---
Confidence            999999999999999999999999999999999999999988765322   1 223448999999999999999999   


Q ss_pred             ChHHHHcCCCcCC
Q 013016          399 GAADVKTHPFFKG  411 (451)
Q Consensus       399 ~~~ell~hp~~~~  411 (451)
                       ++|+|+||||++
T Consensus       271 -~~e~l~hp~~~~  282 (350)
T 4b9d_A          271 -VNSILEKGFIAK  282 (350)
T ss_dssp             -HHHHHTSHHHHT
T ss_pred             -HHHHhcCHHhhc
Confidence             999999999987

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4e-63  Score=469.14  Aligned_cols=257  Identities=30%  Similarity=0.486  Sum_probs=213.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+.+|+.++++++|||||+++++
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~---------~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~   81 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQ---------KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV   81 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTTCC---------EEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE
Confidence            34789999999999999999999887765         499999987766555666778899999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+++.+||||||| +|+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        82 ~~~~~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGl  158 (275)
T 3hyh_A           82 IKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL  158 (275)
T ss_dssp             EECSSEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred             EEECCEEEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCC
Confidence            99999999999999 78999998775  5699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |+....                                                        .....+.+||+.|||||+
T Consensus       159 a~~~~~--------------------------------------------------------~~~~~~~~GT~~Y~APE~  182 (275)
T 3hyh_A          159 SNIMTD--------------------------------------------------------GNFLKTSCGSPNYAAPEV  182 (275)
T ss_dssp             C-----------------------------------------------------------------------CTTSCHHH
T ss_pred             CeecCC--------------------------------------------------------CCccCCeeECcccCChhh
Confidence            853211                                                        011124589999999999


Q ss_pred             ccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..| +.++|||||||++|+|+||+.||.+.+..+.+..+..+...++..     .+.++++||.+||++||++||| 
T Consensus       183 ~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~~L~~dP~~R~s-  256 (275)
T 3hyh_A          183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRMLIVNPLNRIS-  256 (275)
T ss_dssp             HSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-----SCHHHHHHHHHHSCSSGGGSCC-
T ss_pred             hcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHccCChhHCcC-
Confidence            998876 689999999999999999999999998888999998887766543     3348999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         ++|+|+||||+.
T Consensus       257 ---~~eil~hpw~k~  268 (275)
T 3hyh_A          257 ---IHEIMQDDWFKV  268 (275)
T ss_dssp             ---HHHHHHCHHHHT
T ss_pred             ---HHHHHcCccccc
Confidence               999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-62  Score=479.39  Aligned_cols=258  Identities=26%  Similarity=0.412  Sum_probs=223.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ...|++.++||+|+||+||+|+++.+++         .||||++.....   ...+.+.+|+.+|+.++|||||+++++|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~---------~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~  140 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSY  140 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCC---------EEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3679999999999999999999987765         499999976532   2345567899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++++|||||||+||+|.+++..   +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|
T Consensus       141 ~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  217 (346)
T 4fih_A          141 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC  217 (346)
T ss_dssp             EETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCc
Confidence            999999999999999999999976   35999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +....                                                       ......+++||+.|||||++
T Consensus       218 ~~~~~-------------------------------------------------------~~~~~~~~~GTp~YmAPEvl  242 (346)
T 4fih_A          218 AQVSK-------------------------------------------------------EVPRRKSLVGTPYWMAPELI  242 (346)
T ss_dssp             EECCS-------------------------------------------------------SSCCBCCCCSCGGGCCHHHH
T ss_pred             eecCC-------------------------------------------------------CCCcccccccCcCcCCHHHH
Confidence            53321                                                       11122356999999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..|+.++|||||||++|||++|+.||.+.+..+.+..+........ ..+.. .+.++++||.+||++||++|||   
T Consensus       243 ~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~-~~~~~-~s~~~~dli~~~L~~dP~~R~t---  317 (346)
T 4fih_A          243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-KNLHK-VSPSLKGFLDRLLVRDPAQRAT---  317 (346)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-SCGGG-SCHHHHHHHHHHSCSSTTTSCC---
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC-Ccccc-CCHHHHHHHHHHcCCChhHCcC---
Confidence            999999999999999999999999999999888888888876543221 11222 3448999999999999999999   


Q ss_pred             ChHHHHcCCCcCCC
Q 013016          399 GAADVKTHPFFKGL  412 (451)
Q Consensus       399 ~~~ell~hp~~~~~  412 (451)
                       +.|+|+||||++.
T Consensus       318 -a~e~l~Hp~~~~~  330 (346)
T 4fih_A          318 -AAELLKHPFLAKA  330 (346)
T ss_dssp             -HHHHTTCGGGGGC
T ss_pred             -HHHHhcCHhhcCC
Confidence             9999999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.9e-62  Score=487.92  Aligned_cols=258  Identities=26%  Similarity=0.412  Sum_probs=223.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .+.|++.++||+|+||+||+|+++.+++         .||||++.....   ...+.+.+|+.+|+.++|||||+++++|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~---------~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~  217 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSY  217 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCC---------EEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            3679999999999999999999988766         499999975532   2345577899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++++|||||||+||+|.+++..   +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|
T Consensus       218 ~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla  294 (423)
T 4fie_A          218 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC  294 (423)
T ss_dssp             EETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccc
Confidence            999999999999999999999876   35999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                       ......+++||+.|||||++
T Consensus       295 ~~~~~-------------------------------------------------------~~~~~~~~~GTp~YmAPEvl  319 (423)
T 4fie_A          295 AQVSK-------------------------------------------------------EVPRRKSLVGTPYWMAPELI  319 (423)
T ss_dssp             EECCS-------------------------------------------------------SCCCBCCCEECTTTCCHHHH
T ss_pred             eECCC-------------------------------------------------------CCccccccccCcCcCCHHHH
Confidence            53221                                                       11122356999999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..|+.++|||||||++|||++|+.||.+.+..+.+..+........ ..+.. .+.++++||.+||++||++|||   
T Consensus       320 ~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~-~~~~~-~s~~~~dli~~~L~~dP~~R~t---  394 (423)
T 4fie_A          320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-KNLHK-VSPSLKGFLDRLLVRDPAQRAT---  394 (423)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SCTTS-SCHHHHHHHHHHSCSSTTTSCC---
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC-ccccc-CCHHHHHHHHHHcCCChhHCcC---
Confidence            999999999999999999999999999999888888888876543221 12222 3448999999999999999999   


Q ss_pred             ChHHHHcCCCcCCC
Q 013016          399 GAADVKTHPFFKGL  412 (451)
Q Consensus       399 ~~~ell~hp~~~~~  412 (451)
                       +.|||+||||++.
T Consensus       395 -a~ell~Hp~~~~~  407 (423)
T 4fie_A          395 -AAELLKHPFLAKA  407 (423)
T ss_dssp             -HHHHTTCGGGGGC
T ss_pred             -HHHHhcCHHhcCC
Confidence             9999999999974

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.8e-60  Score=453.46  Aligned_cols=253  Identities=24%  Similarity=0.406  Sum_probs=210.2

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe-
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA-  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~-  160 (451)
                      |++.++||+|+||+||+|.++.++.         .||+|++...... ....+.+.+|+.++++++|||||+++++|.+ 
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~---------~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~   97 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTV---------EVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWEST   97 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCe---------EEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec
Confidence            4788899999999999999987765         4999999765433 3345678889999999999999999999975 


Q ss_pred             ---CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEcc-CCCEEEec
Q 013016          161 ---SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRS-DGHIMLSD  234 (451)
Q Consensus       161 ---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~-~~~~kl~D  234 (451)
                         ++.+|||||||+||+|.+++...  +.+++..++.|+.||+.||+|||++|  ||||||||+||||+. +|.+||+|
T Consensus        98 ~~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~D  175 (290)
T 3fpq_A           98 VKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD  175 (290)
T ss_dssp             ETTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECC
T ss_pred             cCCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEe
Confidence               35789999999999999999875  56999999999999999999999999  999999999999984 79999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|+...                                                         .....+++||+.|||
T Consensus       176 FGla~~~~---------------------------------------------------------~~~~~~~~GTp~YmA  198 (290)
T 3fpq_A          176 LGLATLKR---------------------------------------------------------ASFAKAVIGTPEFMA  198 (290)
T ss_dssp             TTGGGGCC---------------------------------------------------------TTSBEESCSSCCCCC
T ss_pred             CcCCEeCC---------------------------------------------------------CCccCCcccCccccC
Confidence            99984211                                                         111224689999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+ .|+.++|||||||+||||+||+.||.+..... .+..+..+..+.  ... ...+.++++||.+||++||++|
T Consensus       199 PE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~--~~~-~~~~~~~~~li~~~L~~dP~~R  274 (290)
T 3fpq_A          199 PEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFD-KVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             GGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGG-GCCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC--CCC-ccCCHHHHHHHHHHccCChhHC
Confidence            998875 69999999999999999999999998765544 444454443211  111 2233489999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCC
Q 013016          394 LGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~  411 (451)
                      ||    +.|+|+||||++
T Consensus       275 ~s----~~e~l~Hp~~~~  288 (290)
T 3fpq_A          275 YS----IKDLLNHAFFQE  288 (290)
T ss_dssp             CC----HHHHHTSGGGC-
T ss_pred             cC----HHHHhcCccccC
Confidence            99    999999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.6e-61  Score=466.09  Aligned_cols=261  Identities=26%  Similarity=0.330  Sum_probs=219.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .+.|.+.++||+|+||+||+|+++.+++         .||||+++.+..        ..+|+.+++.++|||||+++++|
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~---------~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~  119 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGF---------QCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAV  119 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCC---------EEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEE
Confidence            3679999999999999999999987765         499999986422        13599999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg~  237 (451)
                      .+++++|||||||+||+|.+++...  +.+++..++.|+.||+.||+|||++|||||||||+||||+.+| .+||+|||+
T Consensus       120 ~~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGl  197 (336)
T 4g3f_A          120 REGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGH  197 (336)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred             EECCEEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCC
Confidence            9999999999999999999999875  5699999999999999999999999999999999999999998 699999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |+........                                                  ........++||+.|||||+
T Consensus       198 a~~~~~~~~~--------------------------------------------------~~~~~~~~~~GT~~YmAPE~  227 (336)
T 4g3f_A          198 ALCLQPDGLG--------------------------------------------------KSLLTGDYIPGTETHMAPEV  227 (336)
T ss_dssp             CEEC--------------------------------------------------------------CCCCCCGGGCCHHH
T ss_pred             CeEccCCCcc--------------------------------------------------cceecCCccccCccccCHHH
Confidence            8643211000                                                  00112234689999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..|+.++|||||||+||||+||+.||.+.+..+.+.++......+.. .++. .+.++.+||.+||++||.+|||  
T Consensus       228 ~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~-~s~~~~~li~~~L~~dP~~R~s--  303 (336)
T 4g3f_A          228 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE-IPPS-CAPLTAQAIQEGLRKEPVHRAS--  303 (336)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGG-SCTT-SCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchh-cCcc-CCHHHHHHHHHHccCCHhHCcC--
Confidence            99999999999999999999999999999988887788888877654322 2223 3448999999999999999999  


Q ss_pred             CChHHH-------------HcCCCcCCCCc
Q 013016          398 RGAADV-------------KTHPFFKGLNF  414 (451)
Q Consensus       398 ~~~~el-------------l~hp~~~~~~~  414 (451)
                        +.||             |+|||+++...
T Consensus       304 --a~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          304 --AMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             --HHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             --HHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence              9987             57999988544

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.3e-59  Score=489.25  Aligned_cols=285  Identities=32%  Similarity=0.602  Sum_probs=241.1

Q ss_pred             CCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHH---HHHHHHCCCCC
Q 013016           74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME---KKILKMLDHPF  150 (451)
Q Consensus        74 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~h~n  150 (451)
                      ....++++|++.+.||+|+||+||+|+++.+++         .||||++.+..............|   +.+++.++|||
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~---------~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~  253 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGK---------MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF  253 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTT
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCCCC---------EEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCC
Confidence            456778999999999999999999999988765         599999988766544433444444   55566778999


Q ss_pred             ccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          151 LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       151 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ||+++++|.+.+++|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+.+|.+
T Consensus       254 IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~v  331 (689)
T 3v5w_A          254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV  331 (689)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCE
T ss_pred             EeEEEEEEEECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCE
Confidence            999999999999999999999999999999875  569999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||+|+....                                                         ....+++||+
T Consensus       332 KL~DFGlA~~~~~---------------------------------------------------------~~~~t~~GTp  354 (689)
T 3v5w_A          332 RISDLGLACDFSK---------------------------------------------------------KKPHASVGTH  354 (689)
T ss_dssp             EECCCTTCEECSS---------------------------------------------------------CCCCSCCSCG
T ss_pred             EecccceeeecCC---------------------------------------------------------CCCCCccCCc
Confidence            9999999853211                                                         1123469999


Q ss_pred             CccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          311 EYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAP---SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       311 ~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      .|||||++.+ ..|+.++|||||||+||||++|+.||.+.   ...+....+......++..     .+.++++||.+||
T Consensus       355 ~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~-----~S~~a~dLI~~lL  429 (689)
T 3v5w_A          355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS-----FSPELRSLLEGLL  429 (689)
T ss_dssp             GGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHT
T ss_pred             CccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCcc-----CCHHHHHHHHHHc
Confidence            9999999975 57999999999999999999999999763   3345566677776665543     2348999999999


Q ss_pred             ccCcCCcCCC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          387 NKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       387 ~~dP~~Rpt~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      ++||.+|++. ..+++||++||||++++|..+  +...||++|.....
T Consensus       430 ~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~  477 (689)
T 3v5w_A          430 QRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEV  477 (689)
T ss_dssp             CSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCS
T ss_pred             cCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCCC
Confidence            9999999985 456899999999999999865  78899999987654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-58  Score=459.38  Aligned_cols=268  Identities=24%  Similarity=0.348  Sum_probs=219.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|+++.+++         .||||++.+... .......+.+|+.+|+.++|||||++++++.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~---------~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~  123 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQ---------QVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILR  123 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCC---------EEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeee
Confidence            579999999999999999999987765         499999976532 2234466778999999999999999999876


Q ss_pred             e------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 A------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      .      .+++||||||| +|+|.+++...  +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+
T Consensus       124 ~~~~~~~~~~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~  200 (398)
T 4b99_A          124 PTVPYGEFKSVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG  200 (398)
T ss_dssp             CSSCTTTCCCEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred             cccccccCCEEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEe
Confidence            4      36899999999 57899988764  569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+.......                                                   .......+++||+.||
T Consensus       201 DFGla~~~~~~~~---------------------------------------------------~~~~~~~~~~GT~~Y~  229 (398)
T 4b99_A          201 DFGMARGLCTSPA---------------------------------------------------EHQYFMTEYVATRWYR  229 (398)
T ss_dssp             CCTTCBCC----------------------------------------------------------CCCCCSSCCCCTTC
T ss_pred             ecceeeecccCcc---------------------------------------------------ccccccccceeChHhc
Confidence            9999853321100                                                   0111223569999999


Q ss_pred             CcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC---------------------
Q 013016          314 SPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS---------------------  371 (451)
Q Consensus       314 aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~---------------------  371 (451)
                      |||++.+. .|+.++||||+|||+|||++|+.||.+.+..+.+..|......++.....                     
T Consensus       230 APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
T 4b99_A          230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVP  309 (398)
T ss_dssp             CHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCC
T ss_pred             CHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCC
Confidence            99999885 46999999999999999999999999998888888876543322211100                     


Q ss_pred             -----CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          372 -----SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       372 -----~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                           ...+.++++||.+||++||.+|||    +.|+|+||||++...+
T Consensus       310 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~p  354 (398)
T 4b99_A          310 WETVYPGADRQALSLLGRMLRFEPSARIS----AAAALRHPFLAKYHDP  354 (398)
T ss_dssp             HHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHHTTSGGGTTTCCG
T ss_pred             HHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHHhcCHhhCcCCCC
Confidence                 112348999999999999999999    9999999999986544

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.1e-58  Score=445.80  Aligned_cols=272  Identities=24%  Similarity=0.400  Sum_probs=200.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++++.||+|+||+||+|+++.+++         .||||++....  .....+.+.+|+.+|++++|||||+++++|.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~---------~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~   73 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWL   73 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCC---------EEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCC---------EEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            679999999999999999999987765         49999997542  2233456788999999999999999999987


Q ss_pred             eCC------------eEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          160 ASN------------FSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       160 ~~~------------~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      +.+            ++|||||||+||+|.+++..... ...++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus        74 ~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~  153 (299)
T 4g31_A           74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM  153 (299)
T ss_dssp             EEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             ecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC
Confidence            544            47999999999999999986532 23566778999999999999999999999999999999999


Q ss_pred             CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccc
Q 013016          227 DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF  306 (451)
Q Consensus       227 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (451)
                      +|.+||+|||+|+...........                                           ...........+.
T Consensus       154 ~~~vKl~DFGla~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~  190 (299)
T 4g31_A          154 DDVVKVGDFGLVTAMDQDEEEQTV-------------------------------------------LTPMPAYARHTGQ  190 (299)
T ss_dssp             TCCEEECCCCCC--------------------------------------------------------------------
T ss_pred             CCcEEEccCccceecCCCcccccc-------------------------------------------ccccccccccCCc
Confidence            999999999998654321111000                                           0000111223356


Q ss_pred             ccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       307 ~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +||+.|||||++.+..|+.++|||||||++|||++   ||...... ..+..+.....  |.. .... ...+.+||.+|
T Consensus       191 ~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~--p~~-~~~~-~~~~~~li~~~  263 (299)
T 4g31_A          191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKF--PPL-FTQK-YPCEYVMVQDM  263 (299)
T ss_dssp             -CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCC--CHH-HHHH-CHHHHHHHHHH
T ss_pred             ccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCC--CCC-Cccc-CHHHHHHHHHH
Confidence            89999999999999999999999999999999996   77653222 23333333322  111 1111 22678999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      |++||++|||    +.|+|+||||++++|+.
T Consensus       264 L~~dP~~Rps----~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          264 LSPSPMERPE----AINIIENAVFEDLDFPG  290 (299)
T ss_dssp             TCSSGGGSCC----HHHHHTSGGGCCC----
T ss_pred             cCCChhHCcC----HHHHhcCHhhCCCCCCC
Confidence            9999999999    99999999999988753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-57  Score=436.70  Aligned_cols=259  Identities=20%  Similarity=0.308  Sum_probs=207.8

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      +.+..+++.+.++||+|+||+||+|+++.+            ||||+++... ......+.+.+|+.++++++|||||++
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~------------vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l   97 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGD------------VAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLF   97 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSSE------------EEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECCc------------EEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            345568899999999999999999987643            8999987442 233456778899999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++.+ +.+|||||||+||+|.+++.... ..+++..+..|+.||+.||+|||++|||||||||+||||+.++.+||+|
T Consensus        98 ~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~D  175 (307)
T 3omv_A           98 MGYMTK-DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGD  175 (307)
T ss_dssp             EEEECS-SSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECC
T ss_pred             EEEEEC-CeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEee
Confidence            998864 56899999999999999997653 4699999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|+.....                                                     .......+.+||+.|||
T Consensus       176 FGla~~~~~~-----------------------------------------------------~~~~~~~~~~GT~~ymA  202 (307)
T 3omv_A          176 FGLATVKSRW-----------------------------------------------------SGSQQVEQPTGSVLWMA  202 (307)
T ss_dssp             CSSCBC-----------------------------------------------------------------CCCCTTSCC
T ss_pred             ccCceecccC-----------------------------------------------------CcceeecccccCCCccC
Confidence            9998532210                                                     01112234589999999


Q ss_pred             cccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-CCCCCcChHHHHHHHHHhcccCc
Q 013016          315 PEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       315 PE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      ||++.+   ..|+.++|||||||+||||+||+.||.+.+....+..++......|. ...+...+.++.+|+.+||+.||
T Consensus       203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP  282 (307)
T 3omv_A          203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVK  282 (307)
T ss_dssp             HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSS
T ss_pred             HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCH
Confidence            999964   35899999999999999999999999987776665555544332221 12223345589999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      ++|||    +.||++
T Consensus       283 ~~RPs----~~ei~~  293 (307)
T 3omv_A          283 EERPL----FPQILS  293 (307)
T ss_dssp             TTSCC----HHHHHH
T ss_pred             hHCcC----HHHHHH
Confidence            99999    887754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.2e-57  Score=437.97  Aligned_cols=265  Identities=18%  Similarity=0.314  Sum_probs=217.8

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.++||+|+||+||+|.+.....    ...+..||||+++...   ....+.+.+|+++|++++|||||++++
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~----~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g   82 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCP----EQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYG   82 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC--------CEEEEEEEECSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCccc----CCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhCCCCCCccEEE
Confidence            344789999999999999999999865321    1223469999997542   334567888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQ-----------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~-----------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      +|.+++.+|||||||+||+|.+++...           ....+++..+..|+.||+.||+|||+++||||||||+|||++
T Consensus        83 ~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~  162 (299)
T 4asz_A           83 VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG  162 (299)
T ss_dssp             EECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC
Confidence            999999999999999999999999764           235699999999999999999999999999999999999999


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.+||+|||+|+....                                                     .........
T Consensus       163 ~~~~~Ki~DFGla~~~~~-----------------------------------------------------~~~~~~~~~  189 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYS-----------------------------------------------------TDYYRVGGH  189 (299)
T ss_dssp             GGGCEEECCCSCHHHHTG-----------------------------------------------------GGCEEETTT
T ss_pred             CCCcEEECCcccceecCC-----------------------------------------------------CCceeecCc
Confidence            999999999999853211                                                     001111223


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      ..||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+.+..+..+.....    +...+.++.+|+.+
T Consensus       190 ~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~----p~~~~~~~~~li~~  265 (299)
T 4asz_A          190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR----PRTCPQEVYELMLG  265 (299)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCC----CTTCCHHHHHHHHH
T ss_pred             eecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC----CccchHHHHHHHHH
Confidence            479999999999999999999999999999999999 9999999999999888888754221    12234489999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||+.||++|||    +.||+  +||++
T Consensus       266 cl~~dP~~RPs----~~~i~--~~L~~  286 (299)
T 4asz_A          266 CWQREPHMRKN----IKGIH--TLLQN  286 (299)
T ss_dssp             HTCSSGGGSCC----HHHHH--HHHHH
T ss_pred             HcCCChhHCcC----HHHHH--HHHHH
Confidence            99999999999    99984  46654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=4e-57  Score=440.16  Aligned_cols=260  Identities=21%  Similarity=0.321  Sum_probs=212.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||+|+||+||+|+++....    ...+..||||+++...   ....+.+.+|+++|++++|||||+++++
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~----~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~  111 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLP----EQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQHIVRFFGV  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC-------CEEEEEEEESCCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCccc----CCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34789999999999999999999864321    1223469999997542   3345678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP-------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~-------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      |.+.+.+|||||||+||+|.++++...             ..++++..+..|+.||+.||+|||+++||||||||+||||
T Consensus       112 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl  191 (329)
T 4aoj_A          112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV  191 (329)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE
Confidence            999999999999999999999987642             2469999999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||+|+.....                                                     .......
T Consensus       192 ~~~~~~Ki~DFGla~~~~~~-----------------------------------------------------~~~~~~~  218 (329)
T 4aoj_A          192 GQGLVVKIGDFGMSRDIYST-----------------------------------------------------DYYRVGG  218 (329)
T ss_dssp             ETTTEEEECCCC--------------------------------------------------------------------
T ss_pred             CCCCcEEEcccccceeccCC-----------------------------------------------------CcceecC
Confidence            99999999999998532211                                                     0111122


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll  382 (451)
                      ..+||+.|||||++.+..|+.++|||||||+||||+| |+.||...+..+.+..+..+.. ..|.     ..+.++.+|+
T Consensus       219 ~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~-----~~~~~~~~li  293 (329)
T 4aoj_A          219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR-----ACPPEVYAIM  293 (329)
T ss_dssp             -CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCT-----TCCHHHHHHH
T ss_pred             cccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcc-----cccHHHHHHH
Confidence            3579999999999999999999999999999999999 9999999999888888877642 2222     2344899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHcC
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+||+.||++|||    +.||+++
T Consensus       294 ~~cl~~dP~~RPs----~~ei~~~  313 (329)
T 4aoj_A          294 RGCWQREPQQRHS----IKDVHAR  313 (329)
T ss_dssp             HHHCCSSTTTSCC----HHHHHHH
T ss_pred             HHHcCcChhHCcC----HHHHHHH
Confidence            9999999999999    9998763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.2e-57  Score=436.06  Aligned_cols=262  Identities=19%  Similarity=0.272  Sum_probs=214.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ...++++.++||+|+||+||+|.+.+...    ...+..||||+++...  .....+.+.+|+.++++++|||||+++|+
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~----~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~   97 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAP----GEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGV   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-----------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCcc----CCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceE
Confidence            44679999999999999999999864321    1223359999997542  22334678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      |.+++.+|||||||++|+|.+++....              ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus        98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL  177 (308)
T 4gt4_A           98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL  177 (308)
T ss_dssp             ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence            999999999999999999999996532              245899999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      |+.++.+||+|||+|+....                                                     .......
T Consensus       178 l~~~~~~Ki~DFGlar~~~~-----------------------------------------------------~~~~~~~  204 (308)
T 4gt4_A          178 VYDKLNVKISDLGLFREVYA-----------------------------------------------------ADYYKLL  204 (308)
T ss_dssp             ECGGGCEEECCSCCBCGGGG-----------------------------------------------------GGCBCSS
T ss_pred             ECCCCCEEECCcccceeccC-----------------------------------------------------CCceeEe
Confidence            99999999999999853211                                                     1111122


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ...+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+.+..+..+.....    +...+.++.+|+
T Consensus       205 ~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----p~~~~~~~~~li  280 (308)
T 4gt4_A          205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC----PDDCPAWVYALM  280 (308)
T ss_dssp             SSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHH
T ss_pred             cccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----cccchHHHHHHH
Confidence            34589999999999999999999999999999999998 8999999998888888877653221    122344899999


Q ss_pred             HHhcccCcCCcCCCCCChHHHHcC
Q 013016          383 SGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       383 ~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+||+.||++|||    +.||+++
T Consensus       281 ~~C~~~dP~~RPs----~~ei~~~  300 (308)
T 4gt4_A          281 IECWNEFPSRRPR----FKDIHSR  300 (308)
T ss_dssp             HHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHcCCChhHCcC----HHHHHHH
Confidence            9999999999999    9998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.7e-56  Score=441.76  Aligned_cols=286  Identities=23%  Similarity=0.364  Sum_probs=206.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.++||+|+||+||+|+++...      ..+..||||++.+..     ....+.+|+++|+.+ +|||||+++++|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~------~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~   89 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQV------GPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCF   89 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTT------SCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccC------CCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            67999999999999999999876321      112359999987542     224566799999998 699999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl~Dfg~  237 (451)
                      .+.+++|||||||+||+|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+
T Consensus        90 ~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           90 RKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            99999999999999999999884     38999999999999999999999999999999999999977 7999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |+................                        .....   ...+.............+.+||+.|||||+
T Consensus       165 a~~~~~~~~~~~~~~~~~------------------------~~~~~---~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~  217 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSE------------------------AQQER---CSQNKCSICLSRRQQVAPRAGTPGFRAPEV  217 (361)
T ss_dssp             CEECTTCSCGGGGGC-----------------------------------------------------CCCCGGGCCHHH
T ss_pred             CcccCCcccccccccccc------------------------ccccc---cccccccccccccccccccccCccccCHHH
Confidence            965433221110000000                        00000   000000000011122335689999999999


Q ss_pred             ccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcC----------------------------------
Q 013016          318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKK----------------------------------  361 (451)
Q Consensus       318 ~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~----------------------------------  361 (451)
                      +.+.. |+.++||||+|||+|||++|+.||.... ..+.+..|...                                  
T Consensus       218 l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  297 (361)
T 4f9c_A          218 LTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCER  297 (361)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHH
T ss_pred             HcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHh
Confidence            98864 8999999999999999999999996544 33334333210                                  


Q ss_pred             ----CCCCC------------CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          362 ----PLTFP------------TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       362 ----~~~~~------------~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                          ....+            ...+.. .+.++++||.+||++||++|+|    ++|+|+||||++++
T Consensus       298 ~~~~~~~~p~~~~~~~~~~~~~~~~~~-is~~a~DLl~~lL~~dP~~R~t----a~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          298 LRGMDSSTPKLTSDIQGHATNLEGWNE-VPDEAYDLLDKLLDLNPASRIT----AEEALLHPFFKDMS  360 (361)
T ss_dssp             HC----------------------CTT-CCHHHHHHHHHHTCSCTTTSCC----HHHHHTSGGGTTC-
T ss_pred             hcccccccccccccccccccccccccc-CCHHHHHHHHHHCcCChhHCcC----HHHHhcCcccCCCC
Confidence                00000            011122 2348999999999999999999    99999999999975

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3.2e-56  Score=465.18  Aligned_cols=265  Identities=28%  Similarity=0.437  Sum_probs=231.8

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.++||+|+||+||+|.++.+++         .||||++.+....   ..+.+.+|+.+|+.++|||||+++++
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~---------~~AiK~i~~~~~~---~~~~~~~Ei~il~~l~hpnIv~l~~~  222 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERATGN---------NFAAKFVMTPHES---DKETVRKEIQTMSVLRHPTLVNLHDA  222 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCSHH---HHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCCCC---------EEEEEEEeccchh---hHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            45789999999999999999999988766         4999999765322   23556779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC--CCEEEecc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD--GHIMLSDF  235 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~--~~~kl~Df  235 (451)
                      |.+.+++|||||||.||+|.+++... .+.+++..++.++.||+.||+|||++||+||||||+|||++.+  +.+||+||
T Consensus       223 ~~~~~~~~iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DF  301 (573)
T 3uto_A          223 FEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF  301 (573)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EEECCEEEEEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeec
Confidence            99999999999999999999988654 3569999999999999999999999999999999999999854  89999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|.....                                                        .......+||+.||||
T Consensus       302 G~a~~~~~--------------------------------------------------------~~~~~~~~GT~~y~AP  325 (573)
T 3uto_A          302 GLTAHLDP--------------------------------------------------------KQSVKVTTGTAEFAAP  325 (573)
T ss_dssp             SSCEECCT--------------------------------------------------------TSEEEEECSSGGGCCH
T ss_pred             cceeEccC--------------------------------------------------------CCceeeeEECccccCH
Confidence            99853321                                                        0111235899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..|+.++|||||||+||+|++|+.||.+.+..+.+..+......++...+..+.+ ++++||++||++||.+|||
T Consensus       326 Ev~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~dli~~~L~~dp~~R~t  404 (573)
T 3uto_A          326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMT  404 (573)
T ss_dssp             HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCH-HHHHHHHTTSCSSGGGSCC
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCH-HHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999999998887776655555544 8999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCCccc
Q 013016          396 SKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~  416 (451)
                          +.|+|+||||+..+++.
T Consensus       405 ----~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          405 ----IHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             ----HHHHHHSTTTSCCCCTT
T ss_pred             ----HHHHhcCcCcCCCCCCC
Confidence                99999999999977653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=5.8e-56  Score=437.93  Aligned_cols=289  Identities=37%  Similarity=0.699  Sum_probs=245.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+..|..+++.+ +||||++++
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~   90 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGD---------LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF   90 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCC---------EEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEE
Confidence            344889999999999999999999987665         4999999987666666677788899999988 799999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus        91 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DF  168 (353)
T 3txo_A           91 CCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF  168 (353)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccc
Confidence            9999999999999999999999998775  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+++....                                                       ......+++||+.|+||
T Consensus       169 G~a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aP  193 (353)
T 3txo_A          169 GMCKEGIC-------------------------------------------------------NGVTTATFCGTPDYIAP  193 (353)
T ss_dssp             TTCBCSCC----------------------------------------------------------------CCGGGCCH
T ss_pred             cceeeccc-------------------------------------------------------CCccccccCCCcCeECh
Confidence            99842110                                                       01122345899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|||++|+.||...+..+.+..+......++..     .+.++.+||++||++||.+||+
T Consensus       194 E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~lL~~dP~~R~~  268 (353)
T 3txo_A          194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW-----LHEDATGILKSFMTKNPTMRLG  268 (353)
T ss_dssp             HHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSSGGGSTT
T ss_pred             hhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhhhCHHHccC
Confidence            99998889999999999999999999999999999999999999988776654     3338999999999999999999


Q ss_pred             C--CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCC
Q 013016          396 S--KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPF  436 (451)
Q Consensus       396 ~--~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~  436 (451)
                      +  ..+++|+++||||++++|..+  +...||++|...+.....+
T Consensus       269 ~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~  313 (353)
T 3txo_A          269 SLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSN  313 (353)
T ss_dssp             SGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTT
T ss_pred             CcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCCcccccc
Confidence            3  122389999999999999865  7888999999876544433

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.1e-55  Score=430.05  Aligned_cols=290  Identities=38%  Similarity=0.679  Sum_probs=248.1

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+..|+.+++.++||||++++++
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~   73 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA   73 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEE
Confidence            45889999999999999999999887665         499999988765555566778889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+++|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        74 ~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~  151 (337)
T 1o6l_A           74 FQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccc
Confidence            99999999999999999999988764  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      ++....                                                       .......++||+.|+|||+
T Consensus       152 a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aPE~  176 (337)
T 1o6l_A          152 CKEGIS-------------------------------------------------------DGATMKTFCGTPEYLAPEV  176 (337)
T ss_dssp             CBCSCC-------------------------------------------------------TTCCBCCCEECGGGCCGGG
T ss_pred             hhhccc-------------------------------------------------------CCCcccccccChhhCChhh
Confidence            842110                                                       0111224589999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-  396 (451)
                      +.+..++.++|||||||++|||++|+.||...+....+..+......++..     .+.++.+||.+||+.||.+||+. 
T Consensus       177 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL~~dP~~R~g~~  251 (337)
T 1o6l_A          177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT-----LSPEAKSLLAGLLKKDPKQRLGGG  251 (337)
T ss_dssp             GSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             hcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhhcCHHHhcCCC
Confidence            999999999999999999999999999999988888888888877666543     33489999999999999999921 


Q ss_pred             CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCC
Q 013016          397 KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      ...+.||++||||++++|..+  +...||.+|...++....+++
T Consensus       252 ~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~  295 (337)
T 1o6l_A          252 PSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD  295 (337)
T ss_dssp             TTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSC
T ss_pred             CCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCcchhhccc
Confidence            011999999999999999754  678899999887764444433

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=7.8e-55  Score=435.35  Aligned_cols=291  Identities=36%  Similarity=0.701  Sum_probs=242.0

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|++.++||+|+||+||+|+++.+++         .||||++.+...........+..|..++.++ +||||++++
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~---------~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~  119 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH  119 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeE
Confidence            345789999999999999999999987765         4999999987655555666778899999876 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++|.+.+.+||||||++||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus       120 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DF  197 (396)
T 4dc2_A          120 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY  197 (396)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeec
Confidence            9999999999999999999999988775  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+++....                                                       ......+++||+.|+||
T Consensus       198 Gla~~~~~-------------------------------------------------------~~~~~~~~~gt~~Y~aP  222 (396)
T 4dc2_A          198 GMCKEGLR-------------------------------------------------------PGDTTSTFCGTPNYIAP  222 (396)
T ss_dssp             TTCBCCCC-------------------------------------------------------TTCCBCCCCBCGGGCCH
T ss_pred             ceeeeccc-------------------------------------------------------CCCccccccCCcccCCc
Confidence            99842110                                                       01122346899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP---------SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      |++.+..++.++|||||||++|||++|+.||...         ........+......+|..     .+.++++||++||
T Consensus       223 E~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL  297 (396)
T 4dc2_A          223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFL  297 (396)
T ss_dssp             HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHT
T ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc-----CCHHHHHHHHHHh
Confidence            9999999999999999999999999999999642         2334566677776666543     2338999999999


Q ss_pred             ccCcCCcCCCC--CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCC
Q 013016          387 NKDPCNRLGSK--RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       387 ~~dP~~Rpt~~--~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      ++||.+||++.  .++.||++||||++++|..+  +...||++|...++....+++
T Consensus       298 ~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~fd  353 (396)
T 4dc2_A          298 NKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD  353 (396)
T ss_dssp             CSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCSSTTGGGSC
T ss_pred             cCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCCccchhhcC
Confidence            99999999942  23589999999999999864  778899999988764444443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1e-54  Score=427.50  Aligned_cols=282  Identities=34%  Similarity=0.714  Sum_probs=235.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|.+.+.||+|+||+||+|+++.+++         .||||++.+...........+..|..++..+ +||||++++
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~   84 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF   84 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEE
Confidence            344899999999999999999999987665         4999999987655555566677889998876 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+.+|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus        85 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DF  162 (345)
T 1xjd_A           85 CTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF  162 (345)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEC
Confidence            9999999999999999999999998764  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+++....                                                       .......++||+.|+||
T Consensus       163 G~a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aP  187 (345)
T 1xjd_A          163 GMCKENML-------------------------------------------------------GDAKTNTFCGTPDYIAP  187 (345)
T ss_dssp             TTCBCCCC-------------------------------------------------------TTCCBCCCCSCGGGCCH
T ss_pred             hhhhhccc-------------------------------------------------------CCCcccCCCCCcccCCh
Confidence            99842110                                                       00112345899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......++..     .+.++.+||.+||+.||.+||+
T Consensus       188 E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL~~dp~~R~~  262 (345)
T 1xjd_A          188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW-----LEKEAKDLLVKLFVREPEKRLG  262 (345)
T ss_dssp             HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHSCSSGGGSBT
T ss_pred             hhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcc-----cCHHHHHHHHHHhcCCHhHcCC
Confidence            99999999999999999999999999999999998888888888877665543     3348999999999999999999


Q ss_pred             CCCChH-HHHcCCCcCCCCcccc--cccCCCCCCCCCCCCC
Q 013016          396 SKRGAA-DVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKT  433 (451)
Q Consensus       396 ~~~~~~-ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~  433 (451)
                          +. +|++||||++++|..+  +...+|.+|...++..
T Consensus       263 ----~~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~d  299 (345)
T 1xjd_A          263 ----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFD  299 (345)
T ss_dssp             ----TBSCGGGSGGGTTCCHHHHHTTCSCC-----------
T ss_pred             ----ChHHHHcCccccCCCHHHHhhCCCCCCcCCCCCCcch
Confidence                77 9999999999999865  6788999998876543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-54  Score=419.74  Aligned_cols=279  Identities=38%  Similarity=0.733  Sum_probs=242.9

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||+||+|+++.+++         .||+|++.+...........+..|+.+++.++||||++++++
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~   74 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGR---------YYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGT   74 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEE
Confidence            45889999999999999999999887665         499999988765555556777889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+.+.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        75 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~  152 (318)
T 1fot_A           75 FQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF  152 (318)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCc
Confidence            99999999999999999999999875  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +....                                                          ....+.+||+.|+|||+
T Consensus       153 a~~~~----------------------------------------------------------~~~~~~~gt~~y~aPE~  174 (318)
T 1fot_A          153 AKYVP----------------------------------------------------------DVTYTLCGTPDYIAPEV  174 (318)
T ss_dssp             CEECS----------------------------------------------------------SCBCCCCSCTTTCCHHH
T ss_pred             ceecC----------------------------------------------------------CccccccCCccccCHhH
Confidence            84321                                                          01123589999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||...+....+..+......++..     .+.++.+||.+||+.||.+||+..
T Consensus       175 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~lL~~dp~~R~~~~  249 (318)
T 1fot_A          175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF-----FNEDVKDLLSRLITRDLSQRLGNL  249 (318)
T ss_dssp             HTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred             hcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHhccCHHHcCCCc
Confidence            999999999999999999999999999999998888999998887666543     334899999999999999999321


Q ss_pred             -CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          398 -RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       398 -~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                       ..++||++||||++++|..+  +...+|..|...+
T Consensus       250 ~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~~  285 (318)
T 1fot_A          250 QNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQ  285 (318)
T ss_dssp             TTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC--
T ss_pred             CCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcCC
Confidence             12999999999999999865  7778888888763

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.3e-55  Score=431.21  Aligned_cols=262  Identities=19%  Similarity=0.312  Sum_probs=212.8

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC-CCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH-PFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~nIv~l~  155 (451)
                      +..++|++.++||+|+||+||+|.+....+.    ..+..||||++.....  ......+.+|+.+|.++.| ||||+++
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~----~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKT----ATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSST----TCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcc----cCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            3447899999999999999999998765432    2334699999976532  2334668889999999965 8999999


Q ss_pred             EEEEe-CCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          156 AEFEA-SNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       156 ~~~~~-~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      ++|.. ++.+|||||||+||+|.++++...              ...+++..+..|+.||+.||+|||+++||||||||+
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~  214 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  214 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence            99966 467999999999999999997542              245899999999999999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                      |||++.++.+||+|||+|+....                                                     +...
T Consensus       215 NILl~~~~~vKi~DFGlar~~~~-----------------------------------------------------~~~~  241 (353)
T 4ase_A          215 NILLSEKNVVKICDFGLARDIYK-----------------------------------------------------DPDY  241 (353)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTT-----------------------------------------------------CTTS
T ss_pred             ceeeCCCCCEEECcchhhhhccc-----------------------------------------------------CCCc
Confidence            99999999999999999853221                                                     1111


Q ss_pred             ccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHH-HHHhcCC-CCCCCCCCCCcChHH
Q 013016          301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTL-RNIVKKP-LTFPTQSPSSMSEYH  377 (451)
Q Consensus       301 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~-~~i~~~~-~~~~~~~~~~~~~~~  377 (451)
                      ......+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+....+.+ ..+..+. +..|.     ..+.+
T Consensus       242 ~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~-----~~~~~  316 (353)
T 4ase_A          242 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD-----YTTPE  316 (353)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT-----TCCHH
T ss_pred             eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCc-----cCCHH
Confidence            22234589999999999999999999999999999999998 99999987654444 4444442 22222     23448


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.+|+.+||+.||++|||    +.||++|
T Consensus       317 ~~~li~~c~~~dP~~RPt----~~eil~~  341 (353)
T 4ase_A          317 MYQTMLDCWHGEPSQRPT----FSELVEH  341 (353)
T ss_dssp             HHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHHHcCcChhHCcC----HHHHHHH
Confidence            999999999999999999    9999987

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.3e-54  Score=437.47  Aligned_cols=287  Identities=35%  Similarity=0.598  Sum_probs=244.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.++||+|+||+||+|+++.+++         .||+|++.+...........+..|+.++..++||||++++++
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~---------~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  142 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADK---------VFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA  142 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCc---------EEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            34789999999999999999999987655         499999987655554455557789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      |.+.+.+|||||||+||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus       143 ~~~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGl  221 (437)
T 4aw2_A          143 FQDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGS  221 (437)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EeeCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence            99999999999999999999999764 35699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      ++.....                                                      ........+||+.|+|||+
T Consensus       222 a~~~~~~------------------------------------------------------~~~~~~~~~GT~~Y~APE~  247 (437)
T 4aw2_A          222 CLKLMED------------------------------------------------------GTVQSSVAVGTPDYISPEI  247 (437)
T ss_dssp             CEECCTT------------------------------------------------------SCEECCSCCSCGGGCCHHH
T ss_pred             hhhcccC------------------------------------------------------CCcccccccCCcCeeChHH
Confidence            8532110                                                      0111123589999999999


Q ss_pred             cc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          318 AS-----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       318 ~~-----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      +.     +..++.++|||||||++|||++|+.||.+.+..+.+.+++...  ..+|...  ...+.++++||++||..+|
T Consensus       248 l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~--~~~s~~~~dLi~~lL~~~~  325 (437)
T 4aw2_A          248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV--TDVSENAKDLIRRLICSRE  325 (437)
T ss_dssp             HHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSC--CCSCHHHHHHHHTTSSCGG
T ss_pred             HhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCccc--ccCCHHHHHHHHHHhcccc
Confidence            87     4568999999999999999999999999998888888887643  3333321  1234489999999999999


Q ss_pred             CC--cCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCCCC
Q 013016          391 CN--RLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTM  434 (451)
Q Consensus       391 ~~--Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~~~  434 (451)
                      ++  |++    ++|+++||||++++|..++...+|.+|...++...
T Consensus       326 ~r~~r~~----~~eil~Hpff~~i~w~~l~~~~~p~~P~~~~~~d~  367 (437)
T 4aw2_A          326 HRLGQNG----IEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDT  367 (437)
T ss_dssp             GCTTTTT----THHHHTSGGGTTCCTTTGGGSCCSCCCCCSSTTCC
T ss_pred             cccCCCC----HHHHhCCCccCCCCHHHHhhCCCCCCCcCCCccch
Confidence            88  999    99999999999999999999999999998875433

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=9.3e-54  Score=421.80  Aligned_cols=290  Identities=35%  Similarity=0.620  Sum_probs=252.4

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .....++|++.+.||+|+||.||+|.++.+++         .||||++.+...........+.+|+.+++.++||||+++
T Consensus        36 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~  106 (350)
T 1rdq_E           36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGN---------HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL  106 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCCCHHHCEEEEEeecCcCcEEEEEEECCCCC---------EEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            34556899999999999999999999887665         499999988766555566778889999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++.+.+.+|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|
T Consensus       107 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~D  184 (350)
T 1rdq_E          107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD  184 (350)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcc
Confidence            99999999999999999999999999875  4599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++.....                                                          .....+||+.|+|
T Consensus       185 Fg~a~~~~~----------------------------------------------------------~~~~~~gt~~y~a  206 (350)
T 1rdq_E          185 FGFAKRVKG----------------------------------------------------------RTWTLCGTPEALA  206 (350)
T ss_dssp             CTTCEECSS----------------------------------------------------------CBCCCEECGGGCC
T ss_pred             cccceeccC----------------------------------------------------------CcccccCCccccC
Confidence            999853210                                                          1123589999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++.+..++.++|||||||++|+|++|+.||...+..+.+..+..+...++..     .+.++.+||.+||+.||.+||
T Consensus       207 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~lL~~dp~~R~  281 (350)
T 1rdq_E          207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-----FSSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----CCHHHHHHHHHHSCSCTTTCT
T ss_pred             HHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHhhcCHHhcc
Confidence            999999999999999999999999999999999998889999999887766543     234899999999999999999


Q ss_pred             CC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCC
Q 013016          395 GS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       395 t~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      +. ...++||++||||++++|..+  +...+|.+|....+....+++
T Consensus       282 ~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~  328 (350)
T 1rdq_E          282 GNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD  328 (350)
T ss_dssp             TSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSC
T ss_pred             CCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcccccccc
Confidence            84 445899999999999999754  788899999888764444333

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=3.2e-54  Score=425.36  Aligned_cols=284  Identities=33%  Similarity=0.649  Sum_probs=245.9

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      ...++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+..|..++..+ +||||++++
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~   87 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDE---------LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH   87 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEE---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEE
Confidence            345899999999999999999999987655         4999999987655555667777899999887 799999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+++|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus        88 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DF  165 (353)
T 2i0e_A           88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF  165 (353)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeC
Confidence            9999999999999999999999998765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+++....                                                       .......++||+.|+||
T Consensus       166 G~a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aP  190 (353)
T 2i0e_A          166 GMCKENIW-------------------------------------------------------DGVTTKTFCGTPDYIAP  190 (353)
T ss_dssp             TTCBCCCC-------------------------------------------------------TTCCBCCCCSCGGGCCH
T ss_pred             Cccccccc-------------------------------------------------------CCcccccccCCccccCh
Confidence            99842110                                                       00112245899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......++..     .+.++.+||.+||+.||.+||+
T Consensus       191 E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL~~dP~~R~~  265 (353)
T 2i0e_A          191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-----MSKEAVAICKGLMTKHPGKRLG  265 (353)
T ss_dssp             HHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSCTTSCTT
T ss_pred             hhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHhhcCHHHcCC
Confidence            99999999999999999999999999999999999999999999887766643     2348999999999999999996


Q ss_pred             C-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          396 S-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       396 ~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      . ...+++|++||||++++|..+  +...||.+|...+.
T Consensus       266 ~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~  304 (353)
T 2i0e_A          266 CGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR  304 (353)
T ss_dssp             CSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC
T ss_pred             CCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc
Confidence            3 223799999999999999865  78889999988765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.4e-54  Score=429.21  Aligned_cols=284  Identities=38%  Similarity=0.669  Sum_probs=235.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHH-HHHCCCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKI-LKMLDHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~nIv~l~~~  157 (451)
                      .++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+..|..+ ++.++||||++++++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~  107 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEV---------FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS  107 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCC---------EEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCC---------EEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence            3789999999999999999999887665         599999987754444444555666666 467899999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+.+++|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus       108 ~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~  185 (373)
T 2r5t_A          108 FQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL  185 (373)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCB
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcc
Confidence            99999999999999999999998764  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      ++....                                                       .......++||+.|+|||+
T Consensus       186 a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aPE~  210 (373)
T 2r5t_A          186 CKENIE-------------------------------------------------------HNSTTSTFCGTPEYLAPEV  210 (373)
T ss_dssp             CGGGBC-------------------------------------------------------CCCCCCSBSCCCCCCCHHH
T ss_pred             cccccc-------------------------------------------------------CCCccccccCCccccCHHH
Confidence            842110                                                       0112234689999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|||++|..||...+..+.+..+......++..     .+.++.+||.+||+.||.+||++.
T Consensus       211 ~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN-----ITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSS-----SCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             hCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCC-----CCHHHHHHHHHHcccCHHhCCCCC
Confidence            999999999999999999999999999999999999999998886665533     234899999999999999999977


Q ss_pred             CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCC
Q 013016          398 RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKT  433 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~  433 (451)
                      ..+.++++||||++++|..+  +...||++|...++..
T Consensus       286 ~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d  323 (373)
T 2r5t_A          286 DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPND  323 (373)
T ss_dssp             TTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC---
T ss_pred             CCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCcch
Confidence            77899999999999999865  7788999998876543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.7e-54  Score=432.64  Aligned_cols=288  Identities=33%  Similarity=0.588  Sum_probs=243.8

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||+|+||+||+|+++.+++         .||+|++.+...........+..|+.+++.++||||++++++
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~---------~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~  137 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRK---------VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA  137 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCc---------EEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            44789999999999999999999987765         499999987655554555567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      |.+.+++|||||||+||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus       138 ~~~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          138 FQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccce
Confidence            99999999999999999999998763   489999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                      ......+.+||+.|+|||+
T Consensus       215 a~~~~~~------------------------------------------------------~~~~~~~~~gt~~Y~APE~  240 (410)
T 3v8s_A          215 CMKMNKE------------------------------------------------------GMVRCDTAVGTPDYISPEV  240 (410)
T ss_dssp             CEECCTT------------------------------------------------------SEEECCSCCSCGGGCCHHH
T ss_pred             eEeeccC------------------------------------------------------CcccccCCcCCccccCHHH
Confidence            8532210                                                      0111224589999999999


Q ss_pred             ccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          318 ASGGS----HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       318 ~~~~~----~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +.+..    ++.++|||||||+||||++|+.||.+.+..+.+.+++...  ..++.  ... .+.++++||.+||+.+|.
T Consensus       241 l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~-~s~~~~~li~~lL~~~~~  317 (410)
T 3v8s_A          241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD--DND-ISKEAKNLICAFLTDREV  317 (410)
T ss_dssp             HHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT--TCC-CCHHHHHHHHHHSSCGGG
T ss_pred             hhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC--ccc-ccHHHHHHHHHHccChhh
Confidence            98765    7899999999999999999999999999888888887753  23332  122 334899999999999998


Q ss_pred             C--cCCCCCChHHHHcCCCcCCCCcc--cccccCCCCCCCCCCCCCCCCCC
Q 013016          392 N--RLGSKRGAADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       392 ~--Rpt~~~~~~ell~hp~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~  438 (451)
                      +  |++    ++||++||||++++|.  ..+...+|.+|...+.....+++
T Consensus       318 rlgR~~----~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd  364 (410)
T 3v8s_A          318 RLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD  364 (410)
T ss_dssp             CTTSSC----HHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSC
T ss_pred             hCCCCC----HHHHhcCccccCCCHHHHhhcccCCCCCCcCCCccchhhcC
Confidence            8  999    9999999999999885  56889999999988754433333

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-53  Score=420.51  Aligned_cols=284  Identities=37%  Similarity=0.725  Sum_probs=239.1

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+..|..+++++ +||||++++
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~   76 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH   76 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCC---------EEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEE
Confidence            445889999999999999999999987665         4999999877555555667778899999988 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+.+|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus        77 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DF  154 (345)
T 3a8x_A           77 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY  154 (345)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCG
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEec
Confidence            9999999999999999999999998765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+++....                                                       ........+||+.|+||
T Consensus       155 G~a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aP  179 (345)
T 3a8x_A          155 GMCKEGLR-------------------------------------------------------PGDTTSTFCGTPNYIAP  179 (345)
T ss_dssp             GGCBCSCC-------------------------------------------------------TTCCBCCCCSCGGGCCH
T ss_pred             cccccccC-------------------------------------------------------CCCcccccCCCccccCc
Confidence            99842110                                                       00112245899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC---------CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA---------PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      |++.+..++.++|||||||++|||++|+.||..         .........+......++..     .+.++.+||.+||
T Consensus       180 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL  254 (345)
T 3a8x_A          180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS-----LSVKAASVLKSFL  254 (345)
T ss_dssp             HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHT
T ss_pred             cccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHHh
Confidence            999999999999999999999999999999975         22344566666666655543     3348999999999


Q ss_pred             ccCcCCcCCCC--CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          387 NKDPCNRLGSK--RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       387 ~~dP~~Rpt~~--~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      +.||.+||++.  .++.|+++||||++++|..+  +...||..|...+.
T Consensus       255 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~~~  303 (345)
T 3a8x_A          255 NKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGE  303 (345)
T ss_dssp             CSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCTT
T ss_pred             cCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            99999999942  22489999999999999754  67788888888764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.6e-54  Score=430.24  Aligned_cols=285  Identities=39%  Similarity=0.638  Sum_probs=237.9

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.+.||+|+||+||+|+++.+++         .||||++.+...........+..|..++..++|+||+++++
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~---------~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~  128 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQ---------VYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF  128 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence            344889999999999999999999987665         49999998766555555666788999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      +|.+.+++||||||++||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||
T Consensus       129 ~~~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          129 AFQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             EEeeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeech
Confidence            9999999999999999999999997642 359999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++.....                                                      ........+||+.|+|||
T Consensus       208 la~~~~~~------------------------------------------------------~~~~~~~~~Gt~~Y~APE  233 (412)
T 2vd5_A          208 SCLKLRAD------------------------------------------------------GTVRSLVAVGTPDYLSPE  233 (412)
T ss_dssp             TCEECCTT------------------------------------------------------SCEECSSCCSCGGGCCHH
T ss_pred             hheeccCC------------------------------------------------------CccccceeccccCcCCHH
Confidence            98532110                                                      001122358999999999


Q ss_pred             ccc-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--CCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          317 VAS-------GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP--LTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       317 ~~~-------~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      ++.       +..++.++|||||||++|||++|+.||...+..+.+.++....  ..++.  .....+.++++||++||+
T Consensus       234 ~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~s~~~~dli~~lL~  311 (412)
T 2vd5_A          234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL--VDEGVPEEARDFIQRLLC  311 (412)
T ss_dssp             HHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC------CCCHHHHHHHHTTSS
T ss_pred             HHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCc--cccCCCHHHHHHHHHHcC
Confidence            997       3568999999999999999999999999998888888887632  22222  112234489999999999


Q ss_pred             cCcCCcC---CCCCChHHHHcCCCcCCCCcccccccCCCCCCCCCCCC
Q 013016          388 KDPCNRL---GSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQK  432 (451)
Q Consensus       388 ~dP~~Rp---t~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~~~~  432 (451)
                       +|.+|+   +    ++|+++||||++++|..++...||++|...+..
T Consensus       312 -~p~~Rlgr~~----~~ei~~Hpff~~i~w~~l~~~~~p~~p~~~~~~  354 (412)
T 2vd5_A          312 -PPETRLGRGG----AGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGAT  354 (412)
T ss_dssp             -CGGGCTTTTT----HHHHHTSGGGTTCCSTTSTTSCCSCCCC-----
T ss_pred             -ChhhcCCCCC----HHHHhcCCCcCCCCHHHHhhcCCCCCCcCCCcc
Confidence             999985   7    999999999999999999999999999887643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.4e-53  Score=434.30  Aligned_cols=293  Identities=37%  Similarity=0.682  Sum_probs=240.2

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ...++|++.++||+|+||.||+|.++.+++         .||||++.+...........+..|+.+++.++||||+++++
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~  215 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY  215 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEHHHHC-------------CCCCCSCTTSCCEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCC---------EEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEE
Confidence            345789999999999999999999887765         49999998776555555666778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEecc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++...+.+||||||++||+|.+++...  ..+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+||
T Consensus       216 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DF  293 (446)
T 4ejn_A          216 SFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF  293 (446)
T ss_dssp             EEEETTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred             EEeeCCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccC
Confidence            999999999999999999999988765  459999999999999999999998 99999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                       ........+||+.|+||
T Consensus       294 G~a~~~~~-------------------------------------------------------~~~~~~~~~gt~~y~aP  318 (446)
T 4ejn_A          294 GLCKEGIK-------------------------------------------------------DGATMKTFCGTPEYLAP  318 (446)
T ss_dssp             CCCCTTCC------------------------------------------------------------CCSSSCGGGCCH
T ss_pred             CCceeccC-------------------------------------------------------CCcccccccCCccccCH
Confidence            99842110                                                       00111235899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC-
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp-  394 (451)
                      |++.+..++.++|||||||++|+|++|+.||........+..+......++...     +.++.+||.+||++||.+|| 
T Consensus       319 E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----~~~~~~li~~~L~~dP~~R~~  393 (446)
T 4ejn_A          319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL-----GPEAKSLLSGLLKKDPKQRLG  393 (446)
T ss_dssp             HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTS-----CHHHHHHHHHHTCSSTTTSTT
T ss_pred             hhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccC-----CHHHHHHHHHHcccCHHHhCC
Confidence            999999999999999999999999999999999988888888888777665432     34899999999999999999 


Q ss_pred             ----CCCCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCCCccCCc
Q 013016          395 ----GSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPDQKIKSQ  444 (451)
Q Consensus       395 ----t~~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~  444 (451)
                          +    ++|+++||||++++|...  +...||++|...++....+.++....+
T Consensus       394 ~~~~t----~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~~~~  445 (446)
T 4ejn_A          394 GGSED----AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ  445 (446)
T ss_dssp             CSTTT----HHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC-------
T ss_pred             CCCCC----HHHHHhCccccCCCHHHHhhCcCCCCccCCCCCccchhhcchhhhcC
Confidence                8    999999999999999754  788899999999887777777665443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.1e-52  Score=416.29  Aligned_cols=281  Identities=29%  Similarity=0.590  Sum_probs=239.1

Q ss_pred             CCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccc
Q 013016           74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        74 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      ...+.+++|.+.+.||+|+||.||+|.++.+++         .||+|++.+...........+.+|+.+++.++|||||+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~---------~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~   79 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKK---------MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN   79 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            344566899999999999999999999887765         49999998876666666677888999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ++++|.+.+.+|+||||+.||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+
T Consensus        80 l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~  157 (384)
T 4fr4_A           80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT  157 (384)
T ss_dssp             EEEEEECSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEEeCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEe
Confidence            999999999999999999999999998864  569999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                        .......+||+.|+
T Consensus       158 DFG~a~~~~~--------------------------------------------------------~~~~~~~~gt~~Y~  181 (384)
T 4fr4_A          158 DFNIAAMLPR--------------------------------------------------------ETQITTMAGTKPYM  181 (384)
T ss_dssp             CCTTCEECCT--------------------------------------------------------TCCBCCCCSCGGGC
T ss_pred             ccceeeeccC--------------------------------------------------------CCceeccCCCcccc
Confidence            9999853211                                                        01122458999999


Q ss_pred             CcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          314 SPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAP---SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       314 aPE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |||++.+   ..++.++|||||||++|+|++|+.||...   ........+......++..     .+.++.+||.+||+
T Consensus       182 aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~-----~s~~~~~li~~lL~  256 (384)
T 4fr4_A          182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA-----WSQEMVSLLKKLLE  256 (384)
T ss_dssp             CGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHSC
T ss_pred             CCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCc-----CCHHHHHHHHHHhc
Confidence            9999974   45899999999999999999999999753   3345556666665555543     33489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCCcccc--cccCCCCCCCCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      .||.+||+.   +++|++||||++++|..+  +...||++|...
T Consensus       257 ~dP~~R~s~---~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~  297 (384)
T 4fr4_A          257 PNPDQRFSQ---LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKG  297 (384)
T ss_dssp             SSGGGSCCS---HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCC
T ss_pred             CCHhHhccc---HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCC
Confidence            999999983   789999999999999754  778888888754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.5e-52  Score=404.66  Aligned_cols=259  Identities=24%  Similarity=0.430  Sum_probs=226.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+..+++         .||||++.+... .......+.+|+.+++.++||||++++++
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~   82 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGR---------EVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEV   82 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34789999999999999999999877665         499999976543 23445667789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+.+|+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  160 (328)
T 3fe3_A           83 IETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF  160 (328)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTC
T ss_pred             EEECCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccC
Confidence            99999999999999999999998765  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.....                                                        .......+||+.|+|||+
T Consensus       161 a~~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~  184 (328)
T 3fe3_A          161 SNEFTV--------------------------------------------------------GGKLDAFCGAPPYAAPEL  184 (328)
T ss_dssp             CGGGSS--------------------------------------------------------SCGGGTTSSSGGGCCHHH
T ss_pred             ceecCC--------------------------------------------------------CCccccccCCcceeCccc
Confidence            842210                                                        011123589999999999


Q ss_pred             ccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHG-NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~-~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..+. .++|||||||++|+|++|+.||.+.+..+....+..+....|..     .+.++.+||++||+.||.+||| 
T Consensus       185 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~~L~~dP~~R~t-  258 (328)
T 3fe3_A          185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY-----MSTDCENLLKRFLVLNPIKRGT-  258 (328)
T ss_dssp             HHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHCCSSTTTSCC-
T ss_pred             ccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHCCCChhHCcC-
Confidence            9988774 79999999999999999999999999999999998887766543     2348999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         ++|+++||||+...
T Consensus       259 ---~~eil~h~~~~~~~  272 (328)
T 3fe3_A          259 ---LEQIMKDRWINAGH  272 (328)
T ss_dssp             ---HHHHTTCTTTTTTC
T ss_pred             ---HHHHhcCHhhcCCC
Confidence               99999999999844

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.8e-52  Score=407.69  Aligned_cols=292  Identities=34%  Similarity=0.623  Sum_probs=228.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-HHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-KKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .++|++.+.||+|+||.||+|++....      ..+..||+|++.+.... .......+..|+.+++.++||||++++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGA------NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSST------TTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccC------CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            378999999999999999999875221      12235999999865432 22334556779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+++|+||||++|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence            99999999999999999999998764  4589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                       .......+||+.|+|||+
T Consensus       168 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  192 (327)
T 3a62_A          168 CKESIHD-------------------------------------------------------GTVTHTFCGTIEYMAPEI  192 (327)
T ss_dssp             C-----------------------------------------------------------------CTTSSCCTTSCHHH
T ss_pred             ccccccC-------------------------------------------------------CccccccCCCcCccCHhh
Confidence            7421100                                                       011123479999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||...+....+..+......++..     .+.++.+||.+||..||.+||++.
T Consensus       193 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~-----~~~~~~~li~~~L~~dp~~R~~~~  267 (327)
T 3a62_A          193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY-----LTQEARDLLKKLLKRNAASRLGAG  267 (327)
T ss_dssp             HTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT-----SCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred             CcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHHHhcCHhhccCCC
Confidence            999899999999999999999999999999998888888888877665543     334899999999999999999431


Q ss_pred             -CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCCCCCCCC
Q 013016          398 -RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQKTMPFPD  438 (451)
Q Consensus       398 -~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~  438 (451)
                       ..+.|+++||||++++|...  +...+|..|...+.......+
T Consensus       268 ~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~  311 (327)
T 3a62_A          268 PGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD  311 (327)
T ss_dssp             TTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-----------
T ss_pred             CCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChhhhhhcc
Confidence             12899999999999999754  677788888877654443333

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.9e-52  Score=445.39  Aligned_cols=284  Identities=33%  Similarity=0.649  Sum_probs=246.6

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      .+.+++|++.++||+|+||+||+|.++.+++         .||||++.+...........+..|..++..+ +|++|+.+
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~---------~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l  407 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDE---------LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL  407 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEESSSCC---------EEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCE
T ss_pred             cccccceEEEEEEccCCCEEEEEEEECCCCc---------EEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            4456899999999999999999999987765         4999999987665556667778899999887 79999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++.+.+.+||||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|
T Consensus       408 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~D  485 (674)
T 3pfq_A          408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIAD  485 (674)
T ss_dssp             EEECBCSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECC
T ss_pred             EEEEEeCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEee
Confidence            99999999999999999999999999875  4599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+++....                                                       ......+++||+.|+|
T Consensus       486 FGla~~~~~-------------------------------------------------------~~~~~~~~~GT~~Y~A  510 (674)
T 3pfq_A          486 FGMCKENIW-------------------------------------------------------DGVTTKTFCGTPDYIA  510 (674)
T ss_dssp             CTTCEECCC-------------------------------------------------------TTCCBCCCCSCSSSCC
T ss_pred             cceeecccc-------------------------------------------------------CCcccccccCCCcccC
Confidence            999852110                                                       0112234689999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++.+..|+.++|||||||+||||++|+.||.+.+..+.+..+......++...     +.++.+||++||++||++||
T Consensus       511 PE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~~li~~lL~~dP~~R~  585 (674)
T 3pfq_A          511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM-----SKEAVAICKGLMTKHPGKRL  585 (674)
T ss_dssp             HHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTS-----CHHHHHHHHHHSCSSSTTCT
T ss_pred             HhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccC-----CHHHHHHHHHHccCCHHHCC
Confidence            9999999999999999999999999999999999999999999999887776543     33899999999999999999


Q ss_pred             CC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          395 GS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       395 t~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ++ ..+++||++||||++++|..+  +.+.||++|....
T Consensus       586 ~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~  624 (674)
T 3pfq_A          586 GCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG  624 (674)
T ss_dssp             TCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG
T ss_pred             CCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC
Confidence            93 223499999999999999865  7788999998764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=9.7e-52  Score=427.38  Aligned_cols=287  Identities=34%  Similarity=0.587  Sum_probs=243.9

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .+...++|.+.+.||+|+||+||+|+++.+++         .||||++.+...........+..|+.++++++||||+++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~---------~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l  250 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL  250 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCCc---------EEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            34566889999999999999999999987665         499999988766555556778889999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ++++...+.+|+||||++||+|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||
T Consensus       251 ~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL  330 (543)
T 3c4z_A          251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI  330 (543)
T ss_dssp             EEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEE
Confidence            999999999999999999999999887653  456999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                       ......++||+.|
T Consensus       331 ~DFGla~~~~~~-------------------------------------------------------~~~~~~~~GT~~Y  355 (543)
T 3c4z_A          331 SDLGLAVELKAG-------------------------------------------------------QTKTKGYAGTPGF  355 (543)
T ss_dssp             CCCTTCEECCTT-------------------------------------------------------CCCBCCCCSCTTT
T ss_pred             eecceeeeccCC-------------------------------------------------------CcccccccCCccc
Confidence            999998532110                                                       0112235899999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      +|||++.+..++.++|||||||++|||++|+.||....    ..+....+......++..     .+.++.+||.+||+.
T Consensus       356 ~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~lL~~  430 (543)
T 3c4z_A          356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK-----FSPASKDFCEALLQK  430 (543)
T ss_dssp             SCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHSCS
T ss_pred             cChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcc-----cCHHHHHHHHHhccC
Confidence            99999999999999999999999999999999998753    356667777766655533     334899999999999


Q ss_pred             CcCCcCCCCC-ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          389 DPCNRLGSKR-GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       389 dP~~Rpt~~~-~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ||.+||+... .+++|++||||++++|..+  +...||++|....
T Consensus       431 dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~  475 (543)
T 3c4z_A          431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRT  475 (543)
T ss_dssp             SGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSS
T ss_pred             CHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCccc
Confidence            9999998532 3799999999999999865  5678899987653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.1e-52  Score=405.36  Aligned_cols=253  Identities=22%  Similarity=0.279  Sum_probs=191.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.+++.           .||||++.....    .....+.|+..+.+++|||||++++++.
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~-----------~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~   67 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGE-----------EVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTE-----------EEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCE-----------EEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence            5799999999999999999988533           399999976532    1223345666677889999999999998


Q ss_pred             eCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCCcEEEccC
Q 013016          160 ASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML--------GIIYRDLKPENVLVRSD  227 (451)
Q Consensus       160 ~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------givH~Dlkp~NIll~~~  227 (451)
                      +++    .+|||||||+||+|.++++..   .+++..+.+++.|++.||+|||++        +||||||||+||||+.+
T Consensus        68 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~  144 (303)
T 3hmm_A           68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             EECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             ecCCCceEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC
Confidence            654    689999999999999999874   489999999999999999999987        99999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +++||+|||+|+.......                                                   .........+
T Consensus       145 ~~~Ki~DFGla~~~~~~~~---------------------------------------------------~~~~~~~~~~  173 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATD---------------------------------------------------TIDIAPNHRV  173 (303)
T ss_dssp             SCEEECCCTTCEEEETTTT---------------------------------------------------EESCC-----
T ss_pred             CCEEEEeCCCCccccCCCC---------------------------------------------------ceeeeccccc
Confidence            9999999999853321100                                                   0011122358


Q ss_pred             cCCCccCcccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCC---------------ChHHHHHHHhcCCCC--
Q 013016          308 GTHEYVSPEVASGG------SHGNAVDWWAFGIFIYEMIYGRTPFAAP---------------SNETTLRNIVKKPLT--  364 (451)
Q Consensus       308 gt~~y~aPE~~~~~------~~~~~~DIwSlG~il~elltg~~pf~~~---------------~~~~~~~~i~~~~~~--  364 (451)
                      ||+.|||||++.+.      .++.++|||||||+||||+||..||...               ........+......  
T Consensus       174 GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~  253 (303)
T 3hmm_A          174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN  253 (303)
T ss_dssp             CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC
T ss_pred             ccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCC
Confidence            99999999999764      3577999999999999999997765321               122333333333322  


Q ss_pred             CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       365 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +|...........+.+|+.+||+.||++|||    +.||++
T Consensus       254 ~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~  290 (303)
T 3hmm_A          254 IPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK  290 (303)
T ss_dssp             CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred             CCccccchHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence            2222222222336789999999999999999    888875

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=7.9e-52  Score=429.31  Aligned_cols=284  Identities=36%  Similarity=0.581  Sum_probs=239.2

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ....++|.+.+.||+|+||.||+|.++.+++         .||||++.+...........+..|+.+++.++||||++++
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~---------~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~  250 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA  250 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEE
Confidence            3556889999999999999999999987665         4999999887665555566778899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+++|+||||++||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+||
T Consensus       251 ~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DF  330 (576)
T 2acx_A          251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL  330 (576)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEec
Confidence            99999999999999999999999998765566999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                        ......+||+.|+||
T Consensus       331 Gla~~~~~~--------------------------------------------------------~~~~~~~GT~~Y~AP  354 (576)
T 2acx_A          331 GLAVHVPEG--------------------------------------------------------QTIKGRVGTVGYMAP  354 (576)
T ss_dssp             TTCEECCTT--------------------------------------------------------CCEECCCSCGGGCCH
T ss_pred             ccceecccC--------------------------------------------------------ccccccCCCccccCH
Confidence            998532110                                                        011134899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |++.+..++.++|||||||++|||++|+.||....    .......+......++..     .+.++++||.+||+.||.
T Consensus       355 Evl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~-----~s~~~~dLI~~lL~~dP~  429 (576)
T 2acx_A          355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER-----FSPQARSLCSQLLCKDPA  429 (576)
T ss_dssp             HHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCcc-----CCHHHHHHHHHhccCCHH
Confidence            99999889999999999999999999999998753    344555555555444432     334899999999999999


Q ss_pred             CcCCCC-CChHHHHcCCCcCCCCcccc--cccCCCCCCCCC
Q 013016          392 NRLGSK-RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR  429 (451)
Q Consensus       392 ~Rpt~~-~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~  429 (451)
                      +||+.. ..++||++||||++++|..+  +...||++|.+.
T Consensus       430 ~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~  470 (576)
T 2acx_A          430 ERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQ  470 (576)
T ss_dssp             GSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             HcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCcc
Confidence            999321 12899999999999999865  567788888764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=8.3e-52  Score=409.32  Aligned_cols=264  Identities=28%  Similarity=0.436  Sum_probs=227.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||+|++.+......   ...+.+.+|+.+++.++||||+++++
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~---------~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~   82 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGL---------EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD   82 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCC---------EEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEE
Confidence            679999999999999999999987665         499999986532211   12356778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl  232 (451)
                      ++.+.+.+|+||||++||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           83 VYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            999999999999999999999998764  5699999999999999999999999999999999999998877    7999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        ......+||+.|
T Consensus       161 ~DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  184 (361)
T 2yab_A          161 IDFGLAHEIEDG--------------------------------------------------------VEFKNIFGTPEF  184 (361)
T ss_dssp             CCCSSCEECCTT--------------------------------------------------------CCCCCCCSCGGG
T ss_pred             EecCCceEcCCC--------------------------------------------------------CccccCCCCccE
Confidence            999998532210                                                        011234799999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......++...+....+ ++++||.+||..||.+
T Consensus       185 ~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~  263 (361)
T 2yab_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE-LAKDFIRKLLVKETRK  263 (361)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCH-HHHHHHHHHSCSSTTT
T ss_pred             ECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCH-HHHHHHHHHCCCChhH
Confidence            999999998999999999999999999999999999999999999988876665443333333 8999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      |||    +.|+|+||||+.+++.
T Consensus       264 R~t----~~e~l~hp~~~~~~~~  282 (361)
T 2yab_A          264 RLT----IQEALRHPWITPVDTQ  282 (361)
T ss_dssp             SCC----HHHHHTSTTTSCSSHH
T ss_pred             CcC----HHHHhcCcCcCCCchh
Confidence            999    9999999999987763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.9e-50  Score=410.03  Aligned_cols=260  Identities=26%  Similarity=0.491  Sum_probs=225.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||+|++...... ......+.+|+.+++.++||||+++++++.
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~---------~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~   80 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQ---------EYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSIS   80 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTE---------EEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCc---------EEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEE
Confidence            679999999999999999999887765         4999999765432 234566788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc---cCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR---SDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg  236 (451)
                      +.+..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG  158 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG  158 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCc
Confidence            999999999999999999988875  4599999999999999999999999999999999999998   45789999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                       .......+||+.|+|||
T Consensus       159 ~a~~~~~~-------------------------------------------------------~~~~~~~~gt~~Y~APE  183 (444)
T 3soa_A          159 LAIEVEGE-------------------------------------------------------QQAWFGFAGTPGYLSPE  183 (444)
T ss_dssp             SCBCCCTT-------------------------------------------------------CCBCCCSCSCGGGCCHH
T ss_pred             eeEEecCC-------------------------------------------------------CceeecccCCcccCCHH
Confidence            98432210                                                       00112347999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..+...++...++...+ ++.+||.+||+.||.+||| 
T Consensus       184 ~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~Rpt-  261 (444)
T 3soa_A          184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP-EAKDLINKMLTINPSKRIT-  261 (444)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCH-HHHHHHHHHSCSSTTTSCC-
T ss_pred             HhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCH-HHHHHHHHHcCCChhHCCC-
Confidence            99998999999999999999999999999999999999999999888777665555544 8999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.|+|+||||++
T Consensus       262 ---a~e~L~hp~~~~  273 (444)
T 3soa_A          262 ---AAEALKHPWISH  273 (444)
T ss_dssp             ---HHHHHHSCTTHH
T ss_pred             ---HHHHhcCccccC
Confidence               999999999976

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.4e-51  Score=402.08  Aligned_cols=257  Identities=28%  Similarity=0.490  Sum_probs=217.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|.+.+.||+|+||+||+|.+..+++         .||||++.+...........+.+|+.+++.++||||++++++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~   77 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQ---------KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV   77 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            45889999999999999999999877765         499999987765555555678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+||||+ +|+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        78 ~~~~~~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~  154 (336)
T 3h4j_B           78 ITTPTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGL  154 (336)
T ss_dssp             EECSSEEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSC
T ss_pred             EEeCCEEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEecc
Confidence            99999999999999 88999888764  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                        ......+||+.|+|||+
T Consensus       155 s~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~  178 (336)
T 3h4j_B          155 SNIMTDG--------------------------------------------------------NFLKTSCGSPNYAAPEV  178 (336)
T ss_dssp             TBTTTTS--------------------------------------------------------BTTCCCTTSTTTSCGGG
T ss_pred             ceeccCC--------------------------------------------------------cccccccCCcCcCCHHH
Confidence            8432110                                                        01123479999999999


Q ss_pred             ccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..+ +.++|||||||++|+|++|+.||...........+.......+     ...+.++.+||.+||+.||.+||| 
T Consensus       179 ~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p-----~~~s~~~~~li~~~L~~dP~~Rpt-  252 (336)
T 3h4j_B          179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP-----DFLSPGAQSLIRRMIVADPMQRIT-  252 (336)
T ss_dssp             SCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCC-----TTSCHHHHHHHHTTSCSSGGGSCC-
T ss_pred             HcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCc-----ccCCHHHHHHHHHHcCCChhHCcC-
Confidence            998776 7899999999999999999999987655444333333333332     223448999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.|+++||||+.
T Consensus       253 ---~~eil~hp~~~~  264 (336)
T 3h4j_B          253 ---IQEIRRDPWFNV  264 (336)
T ss_dssp             ---HHHHTTCHHHHT
T ss_pred             ---HHHHHhChhhcc
Confidence               999999999987

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.1e-50  Score=389.01  Aligned_cols=259  Identities=25%  Similarity=0.346  Sum_probs=218.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.++||+|+||+||+|.+..+++         .||||++.....   .....+.+|+.+++.++||||++++++
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~   85 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQ---------EVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDS   85 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCC---------EEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCc---------EEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEE
Confidence            34789999999999999999999877665         499999975532   223456779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +..++..|+||||++|++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~  162 (297)
T 3fxz_A           86 YLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF  162 (297)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEECCEEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCC
Confidence            99999999999999999999999774   489999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                       .......+||+.|+|||+
T Consensus       163 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  187 (297)
T 3fxz_A          163 CAQITPE-------------------------------------------------------QSKRSTMVGTPYWMAPEV  187 (297)
T ss_dssp             CEECCST-------------------------------------------------------TCCBCCCCSCGGGCCHHH
T ss_pred             ceecCCc-------------------------------------------------------ccccCCccCCcCccChhh
Confidence            7432210                                                       011123479999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||...........+........  ..+...+..+.+||.+||+.||++|||  
T Consensus       188 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps--  263 (297)
T 3fxz_A          188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLNRCLEMDVEKRGS--  263 (297)
T ss_dssp             HHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC--SCGGGSCHHHHHHHHHHSCSSTTTSCC--
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCccccCHHHHHHHHHHccCChhHCcC--
Confidence            9999999999999999999999999999998877776666554322111  112223448999999999999999999  


Q ss_pred             CChHHHHcCCCcCCC
Q 013016          398 RGAADVKTHPFFKGL  412 (451)
Q Consensus       398 ~~~~ell~hp~~~~~  412 (451)
                        +.|+++||||+..
T Consensus       264 --~~ell~h~~~~~~  276 (297)
T 3fxz_A          264 --AKELLQHQFLKIA  276 (297)
T ss_dssp             --HHHHTTCGGGGGC
T ss_pred             --HHHHhhChhhccc
Confidence              9999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.6e-50  Score=390.94  Aligned_cols=263  Identities=27%  Similarity=0.377  Sum_probs=210.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.+..+.          .||||++..... .......+.+|+.++++++||||+++++++.
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~----------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   89 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGR----------IVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIH   89 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSC----------EEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCC----------EEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEc
Confidence            78999999999999999999985432          499999976532 2333456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++..|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        90 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           90 SERCLTLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR  167 (311)
T ss_dssp             CSSCEEEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence            9999999999995 58888776643 459999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                       .......||+.|+|||++.
T Consensus       168 ~~~~~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~  192 (311)
T 3niz_A          168 AFGIPV-------------------------------------------------------RSYTHEVVTLWYRAPDVLM  192 (311)
T ss_dssp             ETTSCC-------------------------------------------------------C---CCCCCCTTCCHHHHT
T ss_pred             ecCCCc-------------------------------------------------------ccccCCcccCCcCCHHHhc
Confidence            322100                                                       0011236899999999998


Q ss_pred             C-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC-------------------------CCc
Q 013016          320 G-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-------------------------SSM  373 (451)
Q Consensus       320 ~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~-------------------------~~~  373 (451)
                      + ..++.++|||||||++|+|++|+.||.+....+.+..+...........+                         ...
T Consensus       193 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (311)
T 3niz_A          193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG  272 (311)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTT
T ss_pred             CCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcc
Confidence            7 45899999999999999999999999987776665555432111110000                         011


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .+.++.+||.+||++||++|||    +.|+|+||||++++.
T Consensus       273 ~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~  309 (311)
T 3niz_A          273 FCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGGGTTSCT
T ss_pred             cCHHHHHHHHHHcCCChhHCCC----HHHHhcCcccccCCc
Confidence            2347899999999999999999    999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-51  Score=396.39  Aligned_cols=258  Identities=24%  Similarity=0.385  Sum_probs=223.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||+|++....    .....+.+|+.+++.++||||+++++++.
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---------~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   71 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKK---------TYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFE   71 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEE
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCc---------EEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEe
Confidence            789999999999999999999887665         49999987442    22345677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--CCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~Dfg~  237 (451)
                      +.+.+|+|||||+|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~  150 (321)
T 1tki_A           72 SMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             ETTEEEEEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred             cCCEEEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence            999999999999999999988654 245999999999999999999999999999999999999997  78999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                        .......||+.|+|||+
T Consensus       151 a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~  174 (321)
T 1tki_A          151 ARQLKPG--------------------------------------------------------DNFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             CEECCTT--------------------------------------------------------CEEEEEESCGGGSCHHH
T ss_pred             CeECCCC--------------------------------------------------------CccccccCChhhcCcHH
Confidence            8432110                                                        01113478999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|..||......+.+..+......++...+....+ ++.+||.+||+.||.+|||  
T Consensus       175 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dp~~Rpt--  251 (321)
T 1tki_A          175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI-EAMDFVDRLLVKERKSRMT--  251 (321)
T ss_dssp             HTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCH-HHHHHHHTTSCSSGGGSCC--
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCH-HHHHHHHHHcCCChhHCcC--
Confidence            9998889999999999999999999999999999999999988877665433333333 8999999999999999999  


Q ss_pred             CChHHHHcCCCcCCC
Q 013016          398 RGAADVKTHPFFKGL  412 (451)
Q Consensus       398 ~~~~ell~hp~~~~~  412 (451)
                        +.|+|+||||++.
T Consensus       252 --~~e~l~hp~~~~~  264 (321)
T 1tki_A          252 --ASEALQHPWLKQK  264 (321)
T ss_dssp             --HHHHHHSHHHHSC
T ss_pred             --HHHHhcChhhccC
Confidence              9999999999984

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.6e-50  Score=400.71  Aligned_cols=259  Identities=26%  Similarity=0.483  Sum_probs=224.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||+|++...... ......+.+|+.+++.++||||+++++++.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~   98 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGL---------EFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQ   98 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCC---------EEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            679999999999999999999887665         4999999765432 234566788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~kl~Dfg  236 (451)
                      +.+..|+||||+.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG  176 (362)
T 2bdw_A           99 EESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG  176 (362)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecC
Confidence            999999999999999999988764  5599999999999999999999999999999999999998654   59999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       177 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  200 (362)
T 2bdw_A          177 LAIEVNDS--------------------------------------------------------EAWHGFAGTPGYLSPE  200 (362)
T ss_dssp             TCBCCTTC--------------------------------------------------------CSCCCSCSCTTTCCHH
T ss_pred             cceEecCC--------------------------------------------------------cccccCCCCccccCHH
Confidence            98532210                                                        0011347999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++|||||||++|+|++|+.||...+..+.+..+..+...++...+.... .++.+||.+||+.||.+||+ 
T Consensus       201 ~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t-  278 (362)
T 2bdw_A          201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT-PEAKSLIDSMLTVNPKKRIT-  278 (362)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSC-HHHHHHHHHHSCSSGGGSCC-
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC-HHHHHHHHHHcCCChhhCcC-
Confidence            9999899999999999999999999999999988888888888887766654444333 48999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.|+|+||||+.
T Consensus       279 ---~~e~l~hp~~~~  290 (362)
T 2bdw_A          279 ---ADQALKVPWICN  290 (362)
T ss_dssp             ---HHHHTTSHHHHT
T ss_pred             ---HHHHhcCcccCC
Confidence               999999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.8e-50  Score=394.67  Aligned_cols=264  Identities=27%  Similarity=0.431  Sum_probs=224.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||+|++.+......   .....+.+|+.+++.++||||+++++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~   81 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGL---------QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE   81 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCC---------EEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCc---------EEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            569999999999999999999987665         499999976432211   12456778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl  232 (451)
                      ++...+..|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  159 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  159 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEE
Confidence            999999999999999999999998764  5699999999999999999999999999999999999999887    8999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        ......+||+.|
T Consensus       160 ~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  183 (326)
T 2y0a_A          160 IDFGLAHKIDFG--------------------------------------------------------NEFKNIFGTPEF  183 (326)
T ss_dssp             CCCTTCEECCTT--------------------------------------------------------SCCCCCCSCTTT
T ss_pred             EECCCCeECCCC--------------------------------------------------------CccccccCCcCc
Confidence            999998532210                                                        001124799999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +|||++.+..++.++|||||||++|+|++|..||.+....+.+..+......++....... +..+.+||.+||+.||.+
T Consensus       184 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~  262 (326)
T 2y0a_A          184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT-SALAKDFIRRLLVKDPKK  262 (326)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTS-CHHHHHHHHHHSCSSGGG
T ss_pred             CCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccC-CHHHHHHHHHHccCChhh
Confidence            9999999989999999999999999999999999998888888888776655543322233 338999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      |||    +.|+|+||||++.++.
T Consensus       263 Rpt----~~e~l~hp~~~~~~~~  281 (326)
T 2y0a_A          263 RMT----IQDSLQHPWIKPKDTQ  281 (326)
T ss_dssp             SCC----HHHHHHSTTTSCCSHH
T ss_pred             CCC----HHHHhcCCCccCCcch
Confidence            999    9999999999987653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.4e-50  Score=383.54  Aligned_cols=261  Identities=32%  Similarity=0.559  Sum_probs=227.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ...+++|++.+.||+|+||+||+|.++.++.         .||||++.............+.+|+.++++++||||++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   75 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY   75 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCCc---------EEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchh
Confidence            4556899999999999999999999887765         4999999877655555567788899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+..++||||+++++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Df  153 (279)
T 3fdn_A           76 GYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF  153 (279)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSC
T ss_pred             heEecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEec
Confidence            9999999999999999999999988765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                         .......|++.|+||
T Consensus       154 g~~~~~~~---------------------------------------------------------~~~~~~~~~~~y~aP  176 (279)
T 3fdn_A          154 GWSVHAPS---------------------------------------------------------SRRTDLCGTLDYLPP  176 (279)
T ss_dssp             CEESCC-----------------------------------------------------------------CCCCTTCCH
T ss_pred             cccccCCc---------------------------------------------------------ccccccCCCCCccCH
Confidence            98732110                                                         011124789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++||||||+++|+|++|+.||......+....+......++..     .+.++.+||.+||+.||.+||+
T Consensus       177 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps  251 (279)
T 3fdn_A          177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-----VTEGARDLISRLLKHNPSQRPM  251 (279)
T ss_dssp             HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTT-----SCHHHHHHHHHHCCSSGGGSCC
T ss_pred             hHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCc-----CCHHHHHHHHHHhccChhhCCC
Confidence            99999889999999999999999999999999988888888887776655543     3348999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCC
Q 013016          396 SKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~  413 (451)
                          +.||++||||++..
T Consensus       252 ----~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          252 ----LREVLEHPWITANS  265 (279)
T ss_dssp             ----HHHHHHCHHHHHHC
T ss_pred             ----HHHHhhCccccCCc
Confidence                99999999998843

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.2e-50  Score=403.45  Aligned_cols=276  Identities=22%  Similarity=0.288  Sum_probs=219.4

Q ss_pred             cCCceEEeeeccC--CeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           79 FRDFDLHRRIGAG--DIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        79 ~~~y~~~~~LG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      .++|++.++||+|  +||+||+|.++.+++         .||||++..... .......+.+|+.+++.++|||||++++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~   93 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGE---------YVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRA   93 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCC---------EEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCC---------EEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeE
Confidence            3789999999999  999999999987665         499999986643 2345567788999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+.+|+|||||++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg  173 (389)
T 3gni_B           94 TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR  173 (389)
T ss_dssp             EEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGG
T ss_pred             EEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccc
Confidence            99999999999999999999999988766779999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      .+.........                                                ...........+||+.|+|||
T Consensus       174 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~gt~~y~aPE  205 (389)
T 3gni_B          174 SNLSMISHGQR------------------------------------------------QRVVHDFPKYSVKVLPWLSPE  205 (389)
T ss_dssp             GCEECEETTEE------------------------------------------------CSCBCCCCTTCTTTGGGSCHH
T ss_pred             cceeecccccc------------------------------------------------ccccccccccccccccccCHH
Confidence            87432110000                                                000011112347899999999


Q ss_pred             cccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC----------------------------
Q 013016          317 VASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP----------------------------  366 (451)
Q Consensus       317 ~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------------------------  366 (451)
                      ++.+  ..++.++|||||||++|+|++|+.||.+......+..+..+.....                            
T Consensus       206 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (389)
T 3gni_B          206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSL  285 (389)
T ss_dssp             HHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------------
T ss_pred             HHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccccccc
Confidence            9988  5789999999999999999999999988766665555544322110                            


Q ss_pred             -------------CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          367 -------------TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       367 -------------~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                                   ........+.++.+||.+||++||++|||    +.|+|+||||+++.+..
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          286 TTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS----ASTLLNHSFFKQIKRRA  344 (389)
T ss_dssp             --------------------CCHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGGGGC---C
T ss_pred             ccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC----HHHHhcCHHHHHHhhcc
Confidence                         00111223448999999999999999999    99999999999987654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3e-50  Score=403.94  Aligned_cols=259  Identities=24%  Similarity=0.389  Sum_probs=208.1

Q ss_pred             CCcccCCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHH-HHCCCCCcc
Q 013016           75 TGLTFRDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KMLDHPFLP  152 (451)
Q Consensus        75 ~~~~~~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~nIv  152 (451)
                      .+..+++|.+. +.||.|+||+||+|.++.+++         .||||++...        ..+.+|+.++ +..+||||+
T Consensus        56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~---------~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv  118 (400)
T 1nxk_A           56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQE---------KFALKMLQDC--------PKARREVELHWRASQCPHIV  118 (400)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECS--------HHHHHHHHHHHHHTTSTTBC
T ss_pred             CCcccccceeccceeeeccCeEEEEEEECCCCC---------EEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcc
Confidence            34455788887 689999999999999887765         4999999643        2344577776 456899999


Q ss_pred             ceeEEEEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--
Q 013016          153 TLYAEFEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--  226 (451)
Q Consensus       153 ~l~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--  226 (451)
                      ++++++..    .+++|||||||.||+|.+++.......+++..++.|+.||+.||.|||++||+||||||+|||++.  
T Consensus       119 ~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~  198 (400)
T 1nxk_A          119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR  198 (400)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred             eEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC
Confidence            99999876    668999999999999999998765567999999999999999999999999999999999999997  


Q ss_pred             -CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          227 -DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       227 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                       ++.+||+|||++.....                                                        ......
T Consensus       199 ~~~~~kl~DFG~a~~~~~--------------------------------------------------------~~~~~~  222 (400)
T 1nxk_A          199 PNAILKLTDFGFAKETTS--------------------------------------------------------HNSLTT  222 (400)
T ss_dssp             TTCCEEECCCTTCEECC---------------------------------------------------------------
T ss_pred             CCccEEEEecccccccCC--------------------------------------------------------CCcccc
Confidence             78999999999853210                                                        001123


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||......    .....+..+...++...+.... .++.+|
T Consensus       223 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~l  301 (400)
T 1nxk_A          223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS-EEVKML  301 (400)
T ss_dssp             ----CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC-HHHHHH
T ss_pred             CCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC-HHHHHH
Confidence            47999999999999999999999999999999999999999875432    2445566666655544444433 489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      |++||+.||++|||    +.|+++||||.+
T Consensus       302 i~~~L~~dP~~Rpt----~~eil~hp~~~~  327 (400)
T 1nxk_A          302 IRNLLKTEPTQRMT----ITEFMNHPWIMQ  327 (400)
T ss_dssp             HHTTSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred             HHHHCCCChhHCcC----HHHHhcCccccC
Confidence            99999999999999    999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=9.4e-50  Score=393.26  Aligned_cols=258  Identities=30%  Similarity=0.482  Sum_probs=208.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++....     ..+.+.+|+.++++++||||+++++++.
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~  118 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQK---------PYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFE  118 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEE
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCc---------EEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEe
Confidence            679999999999999999999987665         49999997542     2345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~~~kl~Dfg  236 (451)
                      ..+..++||||++|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||
T Consensus       119 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg  196 (349)
T 2w4o_A          119 TPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFG  196 (349)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred             cCCeEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCc
Confidence            999999999999999999988764  55999999999999999999999999999999999999975   8899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       197 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  220 (349)
T 2w4o_A          197 LSKIVEHQ--------------------------------------------------------VLMKTVCGTPGYCAPE  220 (349)
T ss_dssp             ------------------------------------------------------------------------CGGGSCHH
T ss_pred             cccccCcc--------------------------------------------------------cccccccCCCCccCHH
Confidence            98432100                                                        0011347899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++|||||||++|+|++|+.||....... .+..+......++...+.... .++.+||.+||+.||++|||
T Consensus       221 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt  299 (349)
T 2w4o_A          221 ILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS-LNAKDLVRKLIVLDPKKRLT  299 (349)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC-HHHHHHHHTTSCSSGGGSCC
T ss_pred             HhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC-HHHHHHHHHHccCChhhCcC
Confidence            9999899999999999999999999999998766554 666777766555544444433 48999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCCc
Q 013016          396 SKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~  414 (451)
                          +.|+|+||||++...
T Consensus       300 ----~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          300 ----TFQALQHPWVTGKAA  314 (349)
T ss_dssp             ----HHHHHHSTTTTSTTC
T ss_pred             ----HHHHhcCcccCCCcc
Confidence                999999999998543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.5e-50  Score=391.37  Aligned_cols=261  Identities=25%  Similarity=0.414  Sum_probs=212.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.++.+++         .||||++......  ...+.+.+|+.+++.++||||+++++++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~   74 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEE---------AVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHR   74 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCc---------EEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3789999999999999999999887665         4999999754322  2235567799999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++..|+||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  152 (323)
T 3tki_A           75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA  152 (323)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ecCCeEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeecc
Confidence            9999999999999999999998764  45999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .....                                                     ..........+||+.|+|||++
T Consensus       153 ~~~~~-----------------------------------------------------~~~~~~~~~~~gt~~y~aPE~~  179 (323)
T 3tki_A          153 TVFRY-----------------------------------------------------NNRERLLNKMCGTLPYVAPELL  179 (323)
T ss_dssp             EECEE-----------------------------------------------------TTEECCBCSCCSCGGGSCHHHH
T ss_pred             ceecc-----------------------------------------------------CCcccccCCCccCcCccCcHHh
Confidence            43210                                                     0001111235799999999999


Q ss_pred             cCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 ~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .+..+ +.++|||||||++|+|++|+.||...... ..+..+.......+.  . ...+..+.+||.+||+.||.+||| 
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~li~~~L~~dP~~R~t-  255 (323)
T 3tki_A          180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--W-KKIDSAPLALLHKILVENPSARIT-  255 (323)
T ss_dssp             HCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT--G-GGSCHHHHHHHHHHSCSSTTTSCC-
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc--c-ccCCHHHHHHHHHHccCChhhCcC-
Confidence            88775 77999999999999999999999876554 333333333322221  1 123448999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCC
Q 013016          397 KRGAADVKTHPFFKGL  412 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~  412 (451)
                         +.|+++||||++.
T Consensus       256 ---~~eil~h~~~~~~  268 (323)
T 3tki_A          256 ---IPDIKKDRWYNKP  268 (323)
T ss_dssp             ---HHHHTTCTTTTCC
T ss_pred             ---HHHHhhChhhccc
Confidence               9999999999873

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3.4e-50  Score=396.70  Aligned_cols=264  Identities=27%  Similarity=0.437  Sum_probs=218.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH--HHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK--KKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++........  ...+.+.+|+.+++.++||||++++++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~   94 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQ---------QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET   94 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCC---------EEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            569999999999999999999887665         499999986543321  124567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC---EEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IML  232 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~---~kl  232 (451)
                      +.+.+.+|+|||||+|++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||
T Consensus        95 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl  174 (351)
T 3c0i_A           95 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL  174 (351)
T ss_dssp             EEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEE
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEE
Confidence            99999999999999999998877543  2345899999999999999999999999999999999999987654   999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++.......                                                       ......+||+.|
T Consensus       175 ~Dfg~a~~~~~~~-------------------------------------------------------~~~~~~~gt~~y  199 (351)
T 3c0i_A          175 GGFGVAIQLGESG-------------------------------------------------------LVAGGRVGTPHF  199 (351)
T ss_dssp             CCCTTCEECCTTS-------------------------------------------------------CBCCCCCSCGGG
T ss_pred             ecCcceeEecCCC-------------------------------------------------------eeecCCcCCcCc
Confidence            9999985322100                                                       011234799999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||... ....+..+..+....+...+... +.++.+||.+||+.||++
T Consensus       200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~  277 (351)
T 3c0i_A          200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHI-SESAKDLVRRMLMLDPAE  277 (351)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTTS-CHHHHHHHHHHTCSSTTT
T ss_pred             cCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCccccccC-CHHHHHHHHHHCCCChhH
Confidence            9999999989999999999999999999999999874 45566677666554433222222 348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCC
Q 013016          393 RLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      |||    +.|+|+||||++.+
T Consensus       278 R~s----~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          278 RIT----VYEALNHPWLKERD  294 (351)
T ss_dssp             SCC----HHHHHTSHHHHTHH
T ss_pred             CcC----HHHHhcChhhcCCc
Confidence            999    99999999999844

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=6.5e-50  Score=384.22  Aligned_cols=262  Identities=24%  Similarity=0.369  Sum_probs=210.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++..... .......+.+|+.++++++||||+++++++.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   71 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHE---------IVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLH   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCc---------eEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEE
Confidence            689999999999999999999987665         499999975432 2233456678999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++..|+||||+. ++|.+++... .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        72 ~~~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~  149 (292)
T 3o0g_A           72 SDKKLTLVFEFCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR  149 (292)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eCCEEEEEEecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence            9999999999995 4666655543 2569999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       150 ~~~~~-------------------------------------------------------~~~~~~~~~t~~y~aPE~~~  174 (292)
T 3o0g_A          150 AFGIP-------------------------------------------------------VRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             ECCSC-------------------------------------------------------CSCCCSCCSCGGGCCHHHHT
T ss_pred             ecCCc-------------------------------------------------------cccccCCccccCCcChHHHc
Confidence            33210                                                       00111237899999999998


Q ss_pred             CCC-CCcchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHhcCCCCCCCCCC------------------------CCc
Q 013016          320 GGS-HGNAVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQSP------------------------SSM  373 (451)
Q Consensus       320 ~~~-~~~~~DIwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~  373 (451)
                      +.. ++.++|||||||++|+|++|..| |......+.+..+...........+                        ...
T Consensus       175 ~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (292)
T 3o0g_A          175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPK  254 (292)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTT
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccc
Confidence            866 79999999999999999988777 5555556666665442111111100                        012


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      .+.++++||.+||++||++|||    ++|+|+||||+++
T Consensus       255 ~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~  289 (292)
T 3o0g_A          255 LNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFSDF  289 (292)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTC
T ss_pred             cChHHHHHHHHHhccChhhCCC----HHHHhcCcccccC
Confidence            3448899999999999999999    9999999999984

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-49  Score=396.54  Aligned_cols=265  Identities=28%  Similarity=0.445  Sum_probs=225.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      +...++|++.+.||+|+||+||+|.++.+++         .||+|++......   ....+.+|+.+++.++||||++++
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~---------~~a~K~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~~~  114 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKATGR---------VFVAKFINTPYPL---DKYTVKNEISIMNQLHHPKLINLH  114 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCSHH---HHHHHHHHHHHHTTCCSTTBCCEE
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECCCCC---------EEEEEEecccchh---hHHHHHHHHHHHHhCCCcCCCeEE
Confidence            3345789999999999999999999887665         4999999764322   234567799999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--CCCEEEe
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLS  233 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~  233 (451)
                      +++.+.+.+|+||||+.||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.  ++.+||+
T Consensus       115 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~  193 (387)
T 1kob_A          115 DAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII  193 (387)
T ss_dssp             EEEECSSEEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEEC
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEE
Confidence            9999999999999999999999988754 345999999999999999999999999999999999999984  4789999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        ......+||+.|+
T Consensus       194 DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~  217 (387)
T 1kob_A          194 DFGLATKLNPD--------------------------------------------------------EIVKVTTATAEFA  217 (387)
T ss_dssp             CCTTCEECCTT--------------------------------------------------------SCEEEECSSGGGC
T ss_pred             ecccceecCCC--------------------------------------------------------cceeeeccCCCcc
Confidence            99998532110                                                        0011237899999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |||++.+..++.++|||||||++|+|++|..||.+....+.+..+......++........+ ++.+||.+||+.||.+|
T Consensus       218 aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~R  296 (387)
T 1kob_A          218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP-EAKDFIKNLLQKEPRKR  296 (387)
T ss_dssp             CHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH-HHHHHHHTTSCSSGGGS
T ss_pred             CchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCH-HHHHHHHHHcCCChhHC
Confidence            99999998999999999999999999999999999888888888888776665544444444 89999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCCCCc
Q 013016          394 LGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~~~~  414 (451)
                      ||    +.|+|+||||++...
T Consensus       297 pt----~~ell~hp~~~~~~~  313 (387)
T 1kob_A          297 LT----VHDALEHPWLKGDHS  313 (387)
T ss_dssp             CC----HHHHHTSTTTSSCCT
T ss_pred             cC----HHHHhhCccccCCcc
Confidence            99    999999999998544

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=7.3e-50  Score=408.46  Aligned_cols=259  Identities=27%  Similarity=0.439  Sum_probs=226.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ...++|.+.+.||+|+||+||+|.+..+++         .||||++.+...........+.+|+.+++.++||||+++++
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~---------~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~   83 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGH---------KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ   83 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCC---------EEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            445889999999999999999999887665         49999998776555455677888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+.+|+||||++||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG  161 (476)
T 2y94_A           84 VISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG  161 (476)
T ss_dssp             EEECSSEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEecc
Confidence            999999999999999999999998764  569999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       162 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  185 (476)
T 2y94_A          162 LSNMMSDG--------------------------------------------------------EFLRTSCGSPNYAAPE  185 (476)
T ss_dssp             SCEECCTT--------------------------------------------------------CCBCCCCSCSTTCCHH
T ss_pred             chhhcccc--------------------------------------------------------ccccccCCCcCeEChh
Confidence            98532110                                                        0111347999999999


Q ss_pred             cccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..+ +.++|||||||++|+|++|+.||........+..+..+....+..     .+.++.+||.+||+.||.+|||
T Consensus       186 ~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~Li~~~L~~dP~~Rpt  260 (476)
T 2y94_A          186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY-----LNPSVISLLKHMLQVDPMKRAT  260 (476)
T ss_dssp             HHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTT-----CCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCcc-----CCHHHHHHHHHHcCCCchhCcC
Confidence            9998775 789999999999999999999999988888888888876655433     2348999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.|+++||||++
T Consensus       261 ----~~eil~hp~~~~  272 (476)
T 2y94_A          261 ----IKDIREHEWFKQ  272 (476)
T ss_dssp             ----HHHHHTCHHHHT
T ss_pred             ----HHHHHhCHHhhh
Confidence                999999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.7e-50  Score=384.46  Aligned_cols=259  Identities=33%  Similarity=0.547  Sum_probs=212.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-----------------------HHHHHH
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-----------------------KKKVHR  135 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~  135 (451)
                      .++|.+.+.||+|+||.||+|.+..+++         .||||++.......                       ....+.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNT---------YYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ   82 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTE---------EEEEEEEECC-------------------------------CH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCc---------EEEEEEeehhhhhhhcccccccccccccccccccccccchHHH
Confidence            4789999999999999999999877665         49999997653221                       122456


Q ss_pred             HHHHHHHHHHCCCCCccceeEEEEe--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 013016          136 AEMEKKILKMLDHPFLPTLYAEFEA--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII  213 (451)
Q Consensus       136 ~~~e~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~giv  213 (451)
                      +.+|+.++++++||||+++++++..  .+++|+||||+++++|.+++..   ..+++..++.++.||+.||+|||++||+
T Consensus        83 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~iv  159 (298)
T 2zv2_A           83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKII  159 (298)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            7889999999999999999999986  5689999999999999886543   4699999999999999999999999999


Q ss_pred             eccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcc
Q 013016          214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL  293 (451)
Q Consensus       214 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (451)
                      ||||||+|||++.++.+||+|||++.......                                                
T Consensus       160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------  191 (298)
T 2zv2_A          160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD------------------------------------------------  191 (298)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECSSSS------------------------------------------------
T ss_pred             ccCCCHHHEEECCCCCEEEecCCCcccccccc------------------------------------------------
Confidence            99999999999999999999999985322100                                                


Q ss_pred             cccccccccccccccCCCccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC
Q 013016          294 FVAEPVAARSCSFVGTHEYVSPEVASGGS---HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP  370 (451)
Q Consensus       294 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  370 (451)
                             .......||+.|+|||++.+..   ++.++|||||||++|+|++|+.||...........+......++..  
T Consensus       192 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--  262 (298)
T 2zv2_A          192 -------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQ--  262 (298)
T ss_dssp             -------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSS--
T ss_pred             -------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCc--
Confidence                   0111247999999999998765   3788999999999999999999999887777777777665554432  


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                       ...+.++.+||.+||+.||++||+    +.||++||||++
T Consensus       263 -~~~~~~l~~li~~~l~~dp~~R~s----~~e~l~hp~~~~  298 (298)
T 2zv2_A          263 -PDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPWVTR  298 (298)
T ss_dssp             -SCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTCHHHHC
T ss_pred             -cccCHHHHHHHHHHhhcChhhCCC----HHHHhcCccccC
Confidence             123448999999999999999999    999999999964

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.1e-50  Score=392.57  Aligned_cols=271  Identities=25%  Similarity=0.345  Sum_probs=214.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++.....  ......+.+|+.+++.++||||+++++++.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   70 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDN---------LVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIH   70 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCc---------EEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEe
Confidence            689999999999999999999887665         499999975532  122223446899999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  148 (324)
T 3mtl_A           71 TEKSLTLVFEYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR  148 (324)
T ss_dssp             CSSCEEEEEECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred             eCCEEEEEecccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccc
Confidence            9999999999995 69998887653 459999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~t~~y~aPE~~~  173 (324)
T 3mtl_A          149 AKSIP-------------------------------------------------------TKTYDNEVVTLWYRPPDILL  173 (324)
T ss_dssp             CC-------------------------------------------------------------------CGGGCCHHHHT
T ss_pred             cccCC-------------------------------------------------------ccccccccCcccccChhhhc
Confidence            32110                                                       00111236899999999998


Q ss_pred             C-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCC-------------------------c
Q 013016          320 G-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS-------------------------M  373 (451)
Q Consensus       320 ~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-------------------------~  373 (451)
                      + ..++.++|||||||++|+|++|+.||.+....+.+..+.......+...++.                         .
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (324)
T 3mtl_A          174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR  253 (324)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCC
Confidence            7 5689999999999999999999999999888877776655322222111111                         1


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCC
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP  422 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~  422 (451)
                      .+.++.+||.+||++||.+|||    ++|+|+||||+++..........
T Consensus       254 ~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~~~~~~~~~  298 (324)
T 3mtl_A          254 LDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFFLSLGERIHKLPDT  298 (324)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGGGGCSTTSSSCTT
T ss_pred             CCHHHHHHHHHHcCcCcccCCC----HHHHhcChhhhhcccccccCCCC
Confidence            2347899999999999999999    99999999999976654443333

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4e-49  Score=376.80  Aligned_cols=265  Identities=26%  Similarity=0.468  Sum_probs=228.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.++.+++         .||+|++..... .......+.+|+.++++++||||+++++++.
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGL---------EFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ   75 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCc---------eEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence            789999999999999999999887765         499999976543 2334566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC---EEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~---~kl~Dfg  236 (451)
                      ..+..|+||||+.|++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.   +||+|||
T Consensus        76 ~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg  153 (284)
T 3kk8_A           76 EESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG  153 (284)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence            999999999999999999888765  45999999999999999999999999999999999999987655   9999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        .......||+.|+|||
T Consensus       154 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  177 (284)
T 3kk8_A          154 LAIEVNDS--------------------------------------------------------EAWHGFAGTPGYLSPE  177 (284)
T ss_dssp             TCEECCSS--------------------------------------------------------CBCCCSCSCGGGCCHH
T ss_pred             eeEEcccC--------------------------------------------------------ccccCCCCCcCCcCch
Confidence            98432211                                                        0111247899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++||||||+++|+|++|+.||...........+..+....+........+ ++.+||.+||+.||.+||| 
T Consensus       178 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~l~~dp~~Rps-  255 (284)
T 3kk8_A          178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP-EAKSLIDSMLTVNPKKRIT-  255 (284)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH-HHHHHHHHHSCSSTTTSCC-
T ss_pred             hhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCH-HHHHHHHHHcccChhhCCC-
Confidence            99999999999999999999999999999999988888888888877666554444444 8999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCCcccc
Q 013016          397 KRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~~~~  417 (451)
                         +.|+|+||||++......
T Consensus       256 ---~~~~l~h~~~~~~~~~~~  273 (284)
T 3kk8_A          256 ---ADQALKVPWICNRERVAS  273 (284)
T ss_dssp             ---HHHHTTSHHHHSCCCGGG
T ss_pred             ---HHHHhcCccccCChhHHh
Confidence               999999999999665544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.3e-49  Score=380.44  Aligned_cols=259  Identities=34%  Similarity=0.572  Sum_probs=225.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ....++|.+.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.+++.++|+||++++
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   80 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKF---------IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY   80 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEcCCCc---------EEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEE
Confidence            3455889999999999999999999887655         4999999876554444456778899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Df  158 (284)
T 2vgo_A           81 NYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADF  158 (284)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEcCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecc
Confidence            9999999999999999999999998765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                         .......|++.|+||
T Consensus       159 g~~~~~~~---------------------------------------------------------~~~~~~~~~~~y~aP  181 (284)
T 2vgo_A          159 GWSVHAPS---------------------------------------------------------LRRRTMCGTLDYLPP  181 (284)
T ss_dssp             TTCEECSS---------------------------------------------------------SCBCCCCSCGGGCCH
T ss_pred             cccccCcc---------------------------------------------------------cccccccCCCCcCCH
Confidence            98742211                                                         001124789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++||||||+++|+|++|..||......+....+......++..     .+.++.+||.+||+.||.+||+
T Consensus       182 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps  256 (284)
T 2vgo_A          182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF-----LSDGSKDLISKLLRYHPPQRLP  256 (284)
T ss_dssp             HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTT-----SCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCc-----CCHHHHHHHHHHhhcCHhhCCC
Confidence            99999889999999999999999999999999988888888887766555432     3348999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.++++||||+.
T Consensus       257 ----~~~ll~h~~~~~  268 (284)
T 2vgo_A          257 ----LKGVMEHPWVKA  268 (284)
T ss_dssp             ----HHHHHTCHHHHH
T ss_pred             ----HHHHhhCHHHHh
Confidence                999999999986

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=7.9e-50  Score=383.00  Aligned_cols=262  Identities=26%  Similarity=0.359  Sum_probs=209.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.+..+ +         .||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~-~---------~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   70 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYG-E---------TFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIH   70 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTS-C---------EEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCC-C---------EEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEc
Confidence            6899999999999999999998433 2         499999975432 2223355677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+. ++|.+++.... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (288)
T 1ob3_A           71 TKKRLVLVFEHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR  148 (288)
T ss_dssp             CSSCEEEEEECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             cCCeEEEEEEecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence            9999999999995 59998887653 459999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~t~~y~aPE~~~  173 (288)
T 1ob3_A          149 AFGIP-------------------------------------------------------VRKYTHEIVTLWYRAPDVLM  173 (288)
T ss_dssp             HHCC----------------------------------------------------------------CCCTTCCHHHHT
T ss_pred             ccCcc-------------------------------------------------------ccccccccccccccCchhee
Confidence            32110                                                       00111236899999999997


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC------------------------CCCCcC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ------------------------SPSSMS  374 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~  374 (451)
                      +. .++.++|||||||++|+|++|+.||......+.+..+..........                        ......
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T 1ob3_A          174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (288)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhc
Confidence            74 58999999999999999999999999988777766665421100000                        000123


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      +.++.+||.+||+.||++|||    +.|+|+||||++.+
T Consensus       254 ~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~n  288 (288)
T 1ob3_A          254 DESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKENN  288 (288)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC--
T ss_pred             CHHHHHHHHHHcCCCcccCCC----HHHHhcCcchhhcC
Confidence            448899999999999999999    99999999999753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.5e-50  Score=395.08  Aligned_cols=269  Identities=29%  Similarity=0.433  Sum_probs=220.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...       ....|++++.++ +||||+++++++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~   85 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNM---------EFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVY   85 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCC---------EEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEE
Confidence            679999999999999999999987665         499999975421       223477888777 799999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC----CCEEEec
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD----GHIMLSD  234 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~----~~~kl~D  234 (451)
                      .+.+++|+|||||+||+|.+++...  +.+++..+..++.||+.||+|||++||+||||||+|||+..+    +.+||+|
T Consensus        86 ~~~~~~~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~D  163 (342)
T 2qr7_A           86 DDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICD  163 (342)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECC
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEE
Confidence            9999999999999999999988765  559999999999999999999999999999999999998543    3599999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                       .......+||+.|+|
T Consensus       164 fg~a~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~a  188 (342)
T 2qr7_A          164 FGFAKQLRAE-------------------------------------------------------NGLLMTPCYTANFVA  188 (342)
T ss_dssp             CTTCEECBCT-------------------------------------------------------TCCBCCSSCCSSCCC
T ss_pred             CCCcccCcCC-------------------------------------------------------CCceeccCCCccccC
Confidence            9998532110                                                       011123479999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA---PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      ||++.+..++.++|||||||++|+|++|..||..   ....+.+..+..+...++...+....+ ++.+||++||+.||+
T Consensus       189 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~  267 (342)
T 2qr7_A          189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD-TAKDLVSKMLHVDPH  267 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCH-HHHHHHHHHTCSSTT
T ss_pred             HHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCH-HHHHHHHHHCCCChh
Confidence            9999887889999999999999999999999986   345667788888777766555554444 899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCCCcccccccCCCCCC
Q 013016          392 NRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP  426 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p  426 (451)
                      +||+    +.++++||||.+.+......+.+|..|
T Consensus       268 ~R~t----~~~il~hp~~~~~~~~~~~~~~~~~~p  298 (342)
T 2qr7_A          268 QRLT----AALVLRHPWIVHWDQLPQYQLNRQDAP  298 (342)
T ss_dssp             TSCC----HHHHTTSHHHHTGGGSCCSCCCCCCCH
T ss_pred             HCcC----HHHHhcCCeecCccccccccCCCccch
Confidence            9999    999999999976333223334444443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=385.19  Aligned_cols=265  Identities=25%  Similarity=0.313  Sum_probs=209.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH--HHHHHHHHHHHHHHHHC---CCCCccc
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK--KKKVHRAEMEKKILKML---DHPFLPT  153 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l---~h~nIv~  153 (451)
                      .++|++.++||+|+||+||+|.+..+++         .||||++.......  ......+.+|+.+++.+   +||||++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~   78 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGH---------FVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVR   78 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCC---------EEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCc---------EEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEE
Confidence            3789999999999999999999877665         49999997432110  01112334466666655   5999999


Q ss_pred             eeEEEEeCC-----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          154 LYAEFEASN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       154 l~~~~~~~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      +++++....     +.++||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        79 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A           79 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             EEEEEEECCSSSEEEEEEEEECC-CCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS
T ss_pred             eeeeeeccCCCCceeEEEEehhh-hcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            999998765     689999999 46999999887666799999999999999999999999999999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++.....                                                        .......+|
T Consensus       158 ~~kl~Dfg~a~~~~~--------------------------------------------------------~~~~~~~~g  181 (308)
T 3g33_A          158 TVKLADFGLARIYSY--------------------------------------------------------QMALTPVVV  181 (308)
T ss_dssp             CEEECSCSCTTTSTT--------------------------------------------------------CCCSGGGGC
T ss_pred             CEEEeeCccccccCC--------------------------------------------------------CcccCCccc
Confidence            999999999843210                                                        001123478


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC-----------------
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS-----------------  371 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------------  371 (451)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+.......+...++                 
T Consensus       182 t~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (308)
T 3g33_A          182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRP  261 (308)
T ss_dssp             CCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCC
T ss_pred             cccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCc
Confidence            999999999999999999999999999999999999999988888777776532222111111                 


Q ss_pred             -----CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          372 -----SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       372 -----~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                           ...+..+.+||.+||++||++|||    +.|+|+||||++.+
T Consensus       262 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~h~~~~~~~  304 (308)
T 3g33_A          262 VQSVVPEMEESGAQLLLEMLTFNPHKRIS----AFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHSCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSTTC----
T ss_pred             HHHhCccccHHHHHHHHHHhcCCCccCCC----HHHHhcCccccCCC
Confidence                 123348899999999999999999    99999999999843

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.6e-50  Score=409.84  Aligned_cols=292  Identities=24%  Similarity=0.333  Sum_probs=199.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++.+.. ........+.+|+.+++.++|+||+++++++.
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  122 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKR---------VVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVI  122 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--C---------EEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCc---------EEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEe
Confidence            689999999999999999999887765         49999996542 23344567788999999999999999999994


Q ss_pred             e-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 A-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      .     .+.+|+||||+ +++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|
T Consensus       123 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~D  199 (458)
T 3rp9_A          123 PKDVEKFDELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCD  199 (458)
T ss_dssp             CSCTTTCCCEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECC
T ss_pred             cCCcccCceEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecc
Confidence            3     35799999998 78999988764  5699999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++................    .+      ........     +             .............+||+.|+|
T Consensus       200 FGla~~~~~~~~~~~~~~~~----~~------~~~~~~~~-----~-------------~~~~~~~~~~~~~~gt~~Y~a  251 (458)
T 3rp9_A          200 FGLARTVDYPENGNSQLPIS----PR------EDDMNLVT-----F-------------PHTKNLKRQLTGHVVTRWYRA  251 (458)
T ss_dssp             CTTCBCTTSCTTCCCCCC-------------------------------------------------------CCCTTCC
T ss_pred             cccchhccCccccccccccC----cc------cccccccc-----c-------------cccccccccccCCcccccccC
Confidence            99997543221110000000    00      00000000     0             000001112234689999999


Q ss_pred             ccccc-CCCCCcchhHHHHHHHHHHHHh-----------CCCCCCCCCh--------------------HHHHHHHhcCC
Q 013016          315 PEVAS-GGSHGNAVDWWAFGIFIYEMIY-----------GRTPFAAPSN--------------------ETTLRNIVKKP  362 (451)
Q Consensus       315 PE~~~-~~~~~~~~DIwSlG~il~ellt-----------g~~pf~~~~~--------------------~~~~~~i~~~~  362 (451)
                      ||++. +..|+.++||||||||||||++           |+++|.+...                    ...+..+....
T Consensus       252 PE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~  331 (458)
T 3rp9_A          252 PELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNIL  331 (458)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHH
T ss_pred             hHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHc
Confidence            99864 5669999999999999999999           7777765431                    11222221100


Q ss_pred             C--------------------CCCC-------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          363 L--------------------TFPT-------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       363 ~--------------------~~~~-------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      .                    .++.       ...+. .+.++.+||.+||.+||++|||    ++|+|+||||+++++.
T Consensus       332 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~dLl~~mL~~dP~~R~t----~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          332 GTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA-SSADAIHLLKRMLVFNPNKRIT----INECLAHPFFKEVRIA  406 (458)
T ss_dssp             CCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT-SCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTCCG
T ss_pred             CCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC-CCHHHHHHHHHHhccCccccCC----HHHHhcCHhhhhcCCC
Confidence            0                    0000       00111 2448999999999999999999    9999999999999887


Q ss_pred             cc
Q 013016          416 LI  417 (451)
Q Consensus       416 ~~  417 (451)
                      ..
T Consensus       407 ~~  408 (458)
T 3rp9_A          407 EV  408 (458)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=7.1e-50  Score=390.87  Aligned_cols=264  Identities=21%  Similarity=0.302  Sum_probs=210.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.+..+++         .||||++..... .......+.+|+.++++++||||+++++++.
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTVTNE---------TVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIH  103 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEE
T ss_pred             hhEEEEEEEEecCCeEEEEEEECCCCc---------eEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEe
Confidence            789999999999999999999887665         499999975532 2233455667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc-----cCCCEEEec
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-----SDGHIMLSD  234 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~-----~~~~~kl~D  234 (451)
                      .++.+|+||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++     .++.+||+|
T Consensus       104 ~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D  180 (329)
T 3gbz_A          104 HNHRLHLIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGD  180 (329)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred             cCCEEEEEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECc
Confidence            9999999999995 6999998876  4599999999999999999999999999999999999995     445699999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                       .......+||+.|+|
T Consensus       181 fg~a~~~~~~-------------------------------------------------------~~~~~~~~~t~~y~a  205 (329)
T 3gbz_A          181 FGLARAFGIP-------------------------------------------------------IRQFTHEIITLWYRP  205 (329)
T ss_dssp             TTHHHHHC------------------------------------------------------------------CCTTCC
T ss_pred             CCCccccCCc-------------------------------------------------------ccccCCCcCCccccC
Confidence            9998532110                                                       001112368999999


Q ss_pred             cccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC----------------------
Q 013016          315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS----------------------  371 (451)
Q Consensus       315 PE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~----------------------  371 (451)
                      ||++.+.. ++.++|||||||++|+|++|+.||......+.+..+.......+...++                      
T Consensus       206 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (329)
T 3gbz_A          206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKR  285 (329)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHH
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhh
Confidence            99998754 8999999999999999999999999988877777765432211111110                      


Q ss_pred             ---CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          372 ---SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       372 ---~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                         ...+.++.+||.+||++||.+|||    +.|+|+||||++++|.
T Consensus       286 ~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          286 VLGALLDDEGLDLLTAMLEMDPVKRIS----AKNALEHPYFSHNDFD  328 (329)
T ss_dssp             HHGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSSCSC
T ss_pred             hcccccCHHHHHHHHHHccCChhhCCC----HHHHhCCcccCCCCCC
Confidence               013458899999999999999999    9999999999998874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.4e-49  Score=377.25  Aligned_cols=262  Identities=31%  Similarity=0.564  Sum_probs=198.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|.+.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.++++++||||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   79 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGL---------EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY   79 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCc---------eEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEE
Confidence            44789999999999999999999876655         499999987655444455778889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~  158 (278)
T 3cok_A           80 FEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL  158 (278)
T ss_dssp             EECSSEEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTT
T ss_pred             EccCCeEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecc
Confidence            99999999999999999999998764 35699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                       ........||+.|+|||+
T Consensus       159 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~  183 (278)
T 3cok_A          159 ATQLKMP-------------------------------------------------------HEKHYTLCGTPNYISPEI  183 (278)
T ss_dssp             CEECC---------------------------------------------------------------------------
T ss_pred             eeeccCC-------------------------------------------------------CCcceeccCCCCcCCcch
Confidence            7432110                                                       001112468999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||........+..+.......+     ...+.++.+||.+||+.||++||+  
T Consensus       184 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps--  256 (278)
T 3cok_A          184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP-----SFLSIEAKDLIHQLLRRNPADRLS--  256 (278)
T ss_dssp             --------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC-----TTSCHHHHHHHHHHSCSSGGGSCC--
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc-----cccCHHHHHHHHHHcccCHhhCCC--
Confidence            9998899999999999999999999999988766666555544433322     223448999999999999999999  


Q ss_pred             CChHHHHcCCCcCCCC
Q 013016          398 RGAADVKTHPFFKGLN  413 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~  413 (451)
                        +.++++||||++..
T Consensus       257 --~~~~l~h~~~~~~~  270 (278)
T 3cok_A          257 --LSSVLDHPFMSRNS  270 (278)
T ss_dssp             --HHHHTTSTTTC---
T ss_pred             --HHHHhcCccccCCC
Confidence              99999999999844

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=9.3e-50  Score=394.58  Aligned_cols=255  Identities=26%  Similarity=0.435  Sum_probs=213.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-----CCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-----HPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~nIv~l  154 (451)
                      ++|.+.++||+|+||+||+|.+..+++         .||||++....    ........|+.+++.+.     |+||+++
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKK---------YYAVKVVRNIK----KYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECSCH----HHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCe---------EEEEEEeccch----hhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            779999999999999999999877655         49999997432    22344556899999986     9999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--------
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--------  226 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--------  226 (451)
                      ++++...++.|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.        
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence            99999999999999999 999999998877677999999999999999999999999999999999999975        


Q ss_pred             -----------------CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccC
Q 013016          227 -----------------DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLT  289 (451)
Q Consensus       227 -----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (451)
                                       ++.+||+|||++.....                                              
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----------------------------------------------  214 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD----------------------------------------------  214 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTS----------------------------------------------
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCC----------------------------------------------
Confidence                             78999999999843211                                              


Q ss_pred             CCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC
Q 013016          290 PNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS  369 (451)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  369 (451)
                                  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+.......+...
T Consensus       215 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~  282 (360)
T 3llt_A          215 ------------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNM  282 (360)
T ss_dssp             ------------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHH
T ss_pred             ------------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHH
Confidence                        01134789999999999999999999999999999999999999998877776666554322222100


Q ss_pred             ----------------------CC-------------------CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCC
Q 013016          370 ----------------------PS-------------------SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF  408 (451)
Q Consensus       370 ----------------------~~-------------------~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~  408 (451)
                                            +.                   ...+..+.+||.+||++||++|||    +.|+|+|||
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----a~elL~hp~  358 (360)
T 3llt_A          283 LYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS----PAELLKHKF  358 (360)
T ss_dssp             HHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGG
T ss_pred             HhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCC----HHHHhcCcc
Confidence                                  00                   001136789999999999999999    999999999


Q ss_pred             cC
Q 013016          409 FK  410 (451)
Q Consensus       409 ~~  410 (451)
                      |+
T Consensus       359 f~  360 (360)
T 3llt_A          359 LE  360 (360)
T ss_dssp             GC
T ss_pred             cC
Confidence            96

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=7.8e-50  Score=388.54  Aligned_cols=265  Identities=26%  Similarity=0.377  Sum_probs=201.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++....  .......+.+|+.++++++||||+++++++.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   73 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGV---------YVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIH   73 (317)
T ss_dssp             --------------CEEEEEECSSSCC---------EEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCc---------EEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEE
Confidence            689999999999999999999876655         49999997542  1223345667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      .++..|+||||+. ++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+||
T Consensus        74 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  152 (317)
T 2pmi_A           74 TENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDF  152 (317)
T ss_dssp             CTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcC
Confidence            9999999999996 69998886532    245899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.......                                                       ......+||+.|+||
T Consensus       153 g~~~~~~~~~-------------------------------------------------------~~~~~~~~t~~y~aP  177 (317)
T 2pmi_A          153 GLARAFGIPV-------------------------------------------------------NTFSSEVVTLWYRAP  177 (317)
T ss_dssp             SSCEETTSCC-------------------------------------------------------CCCCCCCSCCTTCCH
T ss_pred             ccceecCCCc-------------------------------------------------------ccCCCCcccccccCc
Confidence            9985322100                                                       001123789999999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC-------------------------
Q 013016          316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS-------------------------  369 (451)
Q Consensus       316 E~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------  369 (451)
                      |++.+. .++.++|||||||++|+|++|+.||.+....+.+..+.......+...                         
T Consensus       178 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (317)
T 2pmi_A          178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQV  257 (317)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHH
T ss_pred             hHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHh
Confidence            999874 589999999999999999999999999888777766654211110000                         


Q ss_pred             ----CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 ----PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ----~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                          .....+.++.+||.+||+.||++|||    +.|+|+||||++....
T Consensus       258 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          258 LQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AKQALHHPWFAEYYHH  303 (317)
T ss_dssp             HGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGGGGCC-
T ss_pred             hcccccccCCHHHHHHHHHHCCCCcccCCC----HHHHhCChhhhcccch
Confidence                01123448999999999999999999    9999999999985554

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.4e-49  Score=386.81  Aligned_cols=267  Identities=26%  Similarity=0.398  Sum_probs=226.4

Q ss_pred             CCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           80 RDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      ++|.+. +.||+|+||+||+|.++.+++         .||||++...... ......+.+|+.+++.+ +||||++++++
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQ---------EYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCC---------EEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            458887 889999999999999987665         4999999764322 22345677799999998 46999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CCCEEEec
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSD  234 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~~~kl~D  234 (451)
                      +...+..|+||||+.||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            999999999999999999999987766677999999999999999999999999999999999999997   78999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                        .......||+.|+|
T Consensus       178 fg~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~a  201 (327)
T 3lm5_A          178 FGMSRKIGHA--------------------------------------------------------CELREIMGTPEYLA  201 (327)
T ss_dssp             GGGCEEC-----------------------------------------------------------------CCCGGGCC
T ss_pred             CccccccCCc--------------------------------------------------------cccccccCCcCccC
Confidence            9998532110                                                        00112479999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++.+..++.++|||||||++|+|++|+.||......+....+......++........+ .+.+||.+||+.||.+||
T Consensus       202 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rp  280 (327)
T 3lm5_A          202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ-LATDFIQSLLVKNPEKRP  280 (327)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH-HHHHHHHHHSCSSGGGSC
T ss_pred             CeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCH-HHHHHHHHHcCCChhhCc
Confidence            9999999999999999999999999999999999988888888887776666555444444 899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCCcccc
Q 013016          395 GSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      |    ++++|+||||++.++...
T Consensus       281 t----~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          281 T----AEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             C----HHHHTTCGGGCCCCTTCC
T ss_pred             C----HHHHhCCHhhcccccccc
Confidence            9    999999999999888755

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.4e-49  Score=406.33  Aligned_cols=259  Identities=25%  Similarity=0.381  Sum_probs=208.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.+..+++         .||||++.+.. ........+.+|+.+++.++||||+++++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~  130 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDR---------NVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVF  130 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTE---------EEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCC---------EEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            4789999999999999999999887765         49999997653 2334456777899999999999999999999


Q ss_pred             EeC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EAS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...      .++||||||+.+ +|.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       131 ~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl  205 (464)
T 3ttj_A          131 TPQKTLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  205 (464)
T ss_dssp             CSCCSTTTCCEEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             ccCCccccCCeEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEE
Confidence            654      467999999954 56666543    3899999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++.....                                                        .......+||+.|
T Consensus       206 ~DFG~a~~~~~--------------------------------------------------------~~~~~~~~gt~~y  229 (464)
T 3ttj_A          206 LDFGLARTAGT--------------------------------------------------------SFMMTPYVVTRYY  229 (464)
T ss_dssp             CCCCCC-------------------------------------------------------------CCCC----CCCTT
T ss_pred             EEEEeeeecCC--------------------------------------------------------CcccCCCcccccc
Confidence            99999843211                                                        0011234899999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC----------------------CCC-
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP----------------------TQS-  369 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------------------~~~-  369 (451)
                      +|||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+..++.......                      ... 
T Consensus       230 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (464)
T 3ttj_A          230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  309 (464)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCH
T ss_pred             cCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCCh
Confidence            999999999999999999999999999999999999887777666654211110                      000 


Q ss_pred             ----CC----Cc------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          370 ----PS----SM------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       370 ----~~----~~------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                          +.    ..      .+.++++||.+||.+||++|||    ++|+|+||||+..
T Consensus       310 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~~~~~  362 (464)
T 3ttj_A          310 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS----VDDALQHPYINVW  362 (464)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTGGG
T ss_pred             HHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCC----HHHHhcChhhhhc
Confidence                00    00      0347899999999999999999    9999999999963

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.2e-49  Score=394.01  Aligned_cols=261  Identities=25%  Similarity=0.419  Sum_probs=216.2

Q ss_pred             CceE--EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           81 DFDL--HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        81 ~y~~--~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .|.+  .+.||+|+||.||+|.+..+++         .||+|++.....   .....+.+|+.++++++||||+++++++
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~---------~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~  155 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATGL---------KLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAF  155 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTCC---------EEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCCc---------EEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3554  6789999999999999887665         499999986532   2335677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE--ccCCCEEEeccC
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll--~~~~~~kl~Dfg  236 (451)
                      ...+.+||||||++|++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+  +.++.+||+|||
T Consensus       156 ~~~~~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG  234 (373)
T 2x4f_A          156 ESKNDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG  234 (373)
T ss_dssp             ECSSEEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCS
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCC
Confidence            99999999999999999999886542 458999999999999999999999999999999999999  456789999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       235 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  258 (373)
T 2x4f_A          235 LARRYKPR--------------------------------------------------------EKLKVNFGTPEFLAPE  258 (373)
T ss_dssp             SCEECCTT--------------------------------------------------------CBCCCCCSSCTTCCHH
T ss_pred             CceecCCc--------------------------------------------------------cccccccCCCcEeChh
Confidence            98532210                                                        0111236999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++|||||||++|+|++|+.||.+.+..+.+.++......++........ .++.+||.+||+.||.+||+ 
T Consensus       259 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~Rps-  336 (373)
T 2x4f_A          259 VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS-EEAKEFISKLLIKEKSWRIS-  336 (373)
T ss_dssp             HHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSC-HHHHHHHHTTSCSSGGGSCC-
T ss_pred             hccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCC-HHHHHHHHHHcCCChhhCCC-
Confidence            9998889999999999999999999999999998888888888876655544333333 48999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCCcc
Q 013016          397 KRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~~  415 (451)
                         +.|+|+||||++.++.
T Consensus       337 ---~~e~l~hp~~~~~~~~  352 (373)
T 2x4f_A          337 ---ASEALKHPWLSDHKLH  352 (373)
T ss_dssp             ---HHHHHHSHHHHCHHHH
T ss_pred             ---HHHHhcCcCcCCCchh
Confidence               9999999999996554

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-49  Score=392.37  Aligned_cols=283  Identities=36%  Similarity=0.682  Sum_probs=224.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-HHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-KKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      ..++|.+.+.||+|+||+||+|++....      ..+..||||++.+.... .......+..|+.+++.+ +|+||++++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~  125 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGH------DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH  125 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSST------TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEE
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccC------CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEE
Confidence            3478999999999999999999985321      12235999999754211 112233455689999999 699999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+.+||||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       126 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  203 (355)
T 1vzo_A          126 YAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF  203 (355)
T ss_dssp             EEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred             EEEeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeC
Confidence            9999999999999999999999998765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                      ........++||+.|+||
T Consensus       204 G~a~~~~~------------------------------------------------------~~~~~~~~~~gt~~y~aP  229 (355)
T 1vzo_A          204 GLSKEFVA------------------------------------------------------DETERAYDFCGTIEYMAP  229 (355)
T ss_dssp             SEEEECCG------------------------------------------------------GGGGGGCGGGSCCTTCCH
T ss_pred             CCCeeccc------------------------------------------------------CCCCcccCcccCcCccCh
Confidence            99843210                                                      001112235799999999


Q ss_pred             ccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          316 EVASGG--SHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       316 E~~~~~--~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |++.+.  .++.++|||||||++|+|++|+.||....    .......+......++..     .+..+.+||.+||+.|
T Consensus       230 E~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~L~~d  304 (355)
T 1vzo_A          230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE-----MSALAKDLIQRLLMKD  304 (355)
T ss_dssp             HHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSS
T ss_pred             hhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcc-----cCHHHHHHHHHHhhhC
Confidence            999863  47899999999999999999999997532    334455555554444432     2338999999999999


Q ss_pred             cCCcC-----CCCCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          390 PCNRL-----GSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       390 P~~Rp-----t~~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      |.+||     +    ++|+++||||++++|..+  +..++|+.|..+..
T Consensus       305 P~~R~~~~~~s----~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~~~  349 (355)
T 1vzo_A          305 PKKRLGCGPRD----ADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDE  349 (355)
T ss_dssp             GGGSTTSSTTT----HHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-
T ss_pred             HHHhcCCCCCC----HHHHHcCcchhcCChhHhhhccCCCCCCCccccc
Confidence            99999     7    999999999999999754  56667777777653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.4e-49  Score=376.73  Aligned_cols=260  Identities=27%  Similarity=0.464  Sum_probs=224.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||+|++...........+.+..|+.+++.++|+||+++++++.
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   85 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKE---------VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE   85 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCc---------eEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec
Confidence            679999999999999999999987665         49999998765444455567788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..++||||+.+++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  163 (294)
T 2rku_A           86 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  163 (294)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCce
Confidence            999999999999999999988764  459999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       164 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  188 (294)
T 2rku_A          164 KVEYD-------------------------------------------------------GERKKVLCGTPNYIAPEVLS  188 (294)
T ss_dssp             ECCST-------------------------------------------------------TCCBCCCCSCCSSCCHHHHT
T ss_pred             ecccC-------------------------------------------------------ccccccccCCCCcCCcchhc
Confidence            32110                                                       00111247899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++||||||+++|+|++|+.||......+....+.......+..     .+..+.+||.+||+.||++||+    
T Consensus       189 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps----  259 (294)
T 2rku_A          189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH-----INPVAASLIQKMLQTDPTARPT----  259 (294)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTT-----SCHHHHHHHHHHTCSSGGGSCC----
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccc-----cCHHHHHHHHHHcccChhhCcC----
Confidence            9889999999999999999999999999988888888877766555433     2348999999999999999999    


Q ss_pred             hHHHHcCCCcCCCCc
Q 013016          400 AADVKTHPFFKGLNF  414 (451)
Q Consensus       400 ~~ell~hp~~~~~~~  414 (451)
                      +.|+++||||++...
T Consensus       260 ~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          260 INELLNDEFFTSGYI  274 (294)
T ss_dssp             GGGGGGSHHHHTSCC
T ss_pred             HHHHhhChheecCCc
Confidence            999999999998544

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.9e-49  Score=389.86  Aligned_cols=271  Identities=30%  Similarity=0.468  Sum_probs=222.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH--HHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE--KKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||+|++.+....  .......+..|+.++++++||||++++++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~   96 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRA---------IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV   96 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCc---------eEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehh
Confidence            679999999999999999999877765         4999999876432  23445678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC--------------------------------------CCCCCHHHHHHHHHH
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP--------------------------------------HKRFSLTSARFYAAE  199 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~q  199 (451)
                      +.+.+..|+||||++||+|.+++....                                      ...+++..++.++.|
T Consensus        97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  176 (345)
T 3hko_A           97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ  176 (345)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred             hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence            999999999999999999999885210                                      112467888999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEccCC--CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhc
Q 013016          200 VLVALEYLHMLGIIYRDLKPENVLVRSDG--HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLN  277 (451)
Q Consensus       200 il~aL~~LH~~givH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (451)
                      |+.||+|||++||+||||||+|||++.++  .+||+|||++........                               
T Consensus       177 i~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------  225 (345)
T 3hko_A          177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN-------------------------------  225 (345)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC-------------------------------
T ss_pred             HHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc-------------------------------
Confidence            99999999999999999999999998776  899999999853211100                               


Q ss_pred             cccCCccccccCCCcccccccccccccccccCCCccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013016          278 RFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL  355 (451)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~  355 (451)
                                          ..........||+.|+|||++.+  ..++.++|||||||++|+|++|+.||......+..
T Consensus       226 --------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  285 (345)
T 3hko_A          226 --------------------GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI  285 (345)
T ss_dssp             --------------------C--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------cccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHH
Confidence                                00001123479999999999976  56899999999999999999999999999998888


Q ss_pred             HHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       356 ~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ..+......++...... .+.++.+||.+||+.||.+||+    +.|+|+||||++..+.
T Consensus       286 ~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps----~~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          286 SQVLNKKLCFENPNYNV-LSPLARDLLSNLLNRNVDERFD----AMRALQHPWISQFSDK  340 (345)
T ss_dssp             HHHHHCCCCTTSGGGGG-SCHHHHHHHHHHSCSCTTTSCC----HHHHHHSHHHHTTSSC
T ss_pred             HHHHhcccccCCccccc-CCHHHHHHHHHHcCCChhHCCC----HHHHhcChhhccChHh
Confidence            88888776555433322 3348999999999999999999    9999999999996654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.1e-49  Score=384.85  Aligned_cols=264  Identities=27%  Similarity=0.418  Sum_probs=224.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++........   .....+.+|+.+++.++||||+++++
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   82 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGL---------EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD   82 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCe---------EEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEE
Confidence            679999999999999999999987665         499999976432211   12456778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl  232 (451)
                      ++...+..|+||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++    .+||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl  160 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEE
Confidence            999999999999999999999999764  5689999999999999999999999999999999999999888    7999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||+.|
T Consensus       161 ~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y  184 (321)
T 2a2a_A          161 IDFGLAHEIEDG--------------------------------------------------------VEFKNIFGTPEF  184 (321)
T ss_dssp             CCCTTCEECCTT--------------------------------------------------------CCCCCCCSCGGG
T ss_pred             ccCccceecCcc--------------------------------------------------------ccccccCCCCCc
Confidence            999998532210                                                        001124689999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +|||++.+..++.++|||||||++|+|++|..||......+.+..+......++...... .+..+.+||.+||+.||.+
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~  263 (321)
T 2a2a_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH-TSELAKDFIRKLLVKETRK  263 (321)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT-CCHHHHHHHHTTSCSSTTT
T ss_pred             cCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc-cCHHHHHHHHHHcCCChhh
Confidence            999999998999999999999999999999999999888888888887665544322222 2338999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      |||    +.|+++||||+.+++.
T Consensus       264 Rps----~~e~l~hp~~~~~~~~  282 (321)
T 2a2a_A          264 RLT----IQEALRHPWITPVDNQ  282 (321)
T ss_dssp             SCC----HHHHHHSTTTSCSSHH
T ss_pred             CcC----HHHHhcCccccCCCcc
Confidence            999    9999999999997764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=7.9e-49  Score=384.41  Aligned_cols=259  Identities=27%  Similarity=0.464  Sum_probs=224.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||+|++.+.........+.+.+|+.+++.++|+||+++++++.
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  111 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKE---------VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE  111 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            679999999999999999999987665         49999998765444455667788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+..|+||||+.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          112 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            999999999999999999988764  459999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       190 ~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~~~  214 (335)
T 2owb_A          190 KVEYD-------------------------------------------------------GERKKVLCGTPNYIAPEVLS  214 (335)
T ss_dssp             ECCST-------------------------------------------------------TCCBCCCCSCCSSCCHHHHH
T ss_pred             ecccC-------------------------------------------------------cccccccCCCccccCHHHhc
Confidence            32110                                                       00111247899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||......+.+..+......++..     .+..+.+||.+||+.||++||+    
T Consensus       215 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps----  285 (335)
T 2owb_A          215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH-----INPVAASLIQKMLQTDPTARPT----  285 (335)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTT-----SCHHHHHHHHHHTCSSGGGSCC----
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCcc-----CCHHHHHHHHHHccCChhHCcC----
Confidence            9889999999999999999999999999988888887777766555433     2348999999999999999999    


Q ss_pred             hHHHHcCCCcCCCC
Q 013016          400 AADVKTHPFFKGLN  413 (451)
Q Consensus       400 ~~ell~hp~~~~~~  413 (451)
                      +.|+++||||++..
T Consensus       286 ~~ell~~~~~~~~~  299 (335)
T 2owb_A          286 INELLNDEFFTSGY  299 (335)
T ss_dssp             GGGGGGSHHHHTSC
T ss_pred             HHHHhcCccccCCC
Confidence            99999999999843

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.4e-49  Score=388.15  Aligned_cols=256  Identities=26%  Similarity=0.488  Sum_probs=197.4

Q ss_pred             CCceEE---eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCcccee
Q 013016           80 RDFDLH---RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLY  155 (451)
Q Consensus        80 ~~y~~~---~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~  155 (451)
                      ++|++.   +.||+|+||+||+|.++.+++         .||||++.+..      .....+|+.+++.+. ||||++++
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~   72 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQ---------AFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLH   72 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCC---------EEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCC---------EEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEE
Confidence            557775   789999999999999987665         49999997542      234556999999997 99999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CEEE
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIML  232 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~kl  232 (451)
                      +++.+.++.|+||||++||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||
T Consensus        73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl  150 (325)
T 3kn6_A           73 EVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI  150 (325)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEE
T ss_pred             EEEEcCCEEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEE
Confidence            9999999999999999999999999875  5699999999999999999999999999999999999998766   8999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                       .......+||+.|
T Consensus       151 ~Dfg~a~~~~~~-------------------------------------------------------~~~~~~~~~t~~y  175 (325)
T 3kn6_A          151 IDFGFARLKPPD-------------------------------------------------------NQPLKTPCFTLHY  175 (325)
T ss_dssp             CCCTTCEECCC---------------------------------------------------------------------
T ss_pred             eccccceecCCC-------------------------------------------------------CCcccccCCCcCc
Confidence            999998532110                                                       0011134789999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-------NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||....       ..+.+..+..+...++...+... +.++.+||.+|
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~~  254 (325)
T 3kn6_A          176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV-SQEAKDLIQGL  254 (325)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS-CHHHHHHHHHH
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC-CHHHHHHHHHH
Confidence            99999999999999999999999999999999998643       34567777776665544332233 33899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      |+.||.+|||    +.|+++||||++.
T Consensus       255 L~~dP~~Rpt----~~ell~h~w~~~~  277 (325)
T 3kn6_A          255 LTVDPNKRLK----MSGLRYNEWLQDG  277 (325)
T ss_dssp             HCCCTTTCCC----TTTSTTCGGGCTT
T ss_pred             CCCChhHCCC----HHHHhcChhhccC
Confidence            9999999999    9999999999984

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-49  Score=396.45  Aligned_cols=285  Identities=23%  Similarity=0.377  Sum_probs=208.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~  157 (451)
                      .++|++.+.||+|+||+||+|.++.+++         .||||++.+.. ........+.+|+.+++.+. ||||++++++
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~   77 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGE---------VVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNV   77 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCC---------EEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCC---------EEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeE
Confidence            3789999999999999999999887765         49999986542 22344566778999999997 9999999999


Q ss_pred             EEeCC--eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEASN--FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +...+  .+|+|||||. ++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        78 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  153 (388)
T 3oz6_A           78 LRADNDRDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADF  153 (388)
T ss_dssp             EECTTSSCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             EecCCCCEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCC
Confidence            97554  7999999995 789998876   35899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.............                 .......                 ..............+||+.|+||
T Consensus       154 G~a~~~~~~~~~~~~~-----------------~~~~~~~-----------------~~~~~~~~~~~~~~~gt~~y~aP  199 (388)
T 3oz6_A          154 GLSRSFVNIRRVTNNI-----------------PLSINEN-----------------TENFDDDQPILTDYVATRWYRAP  199 (388)
T ss_dssp             TTCEESSSCCCCCCCG-----------------GGCCC--------------------------------CCCGGGGCCH
T ss_pred             cccccccccccccccc-----------------ccccccc-----------------ccccccccccccCCcccCCcCCH
Confidence            9986543211110000                 0000000                 00000011122345899999999


Q ss_pred             ccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC--------------------------C
Q 013016          316 EVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT--------------------------Q  368 (451)
Q Consensus       316 E~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~--------------------------~  368 (451)
                      |++.+ ..++.++|||||||++|||++|+.||.+.+....+..+.........                          .
T Consensus       200 E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (388)
T 3oz6_A          200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQS  279 (388)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC----
T ss_pred             HHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCC
Confidence            99987 56899999999999999999999999998887777776532111100                          0


Q ss_pred             C----------------CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          369 S----------------PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       369 ~----------------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      .                .....+.++.+||.+||++||++|||    +.|+|+||||+.....
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t----~~e~l~Hp~~~~~~~~  338 (388)
T 3oz6_A          280 NKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS----ANDALKHPFVSIFHNP  338 (388)
T ss_dssp             -CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSTTTTTTCCG
T ss_pred             CHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC----HHHHhCCHHHHHhcCC
Confidence            0                00122348999999999999999999    9999999999986544

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.5e-48  Score=380.31  Aligned_cols=278  Identities=26%  Similarity=0.382  Sum_probs=226.0

Q ss_pred             hhhhhhhhhccCCCC-CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHH
Q 013016           61 FAYSAIRSATFGRKT-GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME  139 (451)
Q Consensus        61 ~~~~~~~~~~~~~~~-~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e  139 (451)
                      +++.+++.++..... +.....|...++||+|+||.||+|.++.+++         .||||++....   ....+.+.+|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~---------~vavK~~~~~~---~~~~~~~~~E   92 (321)
T 2c30_A           25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGR---------QVAVKMMDLRK---QQRRELLFNE   92 (321)
T ss_dssp             CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEETTT---CCSHHHHHHH
T ss_pred             CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCc---------EEEEEEEeccc---hhHHHHHHHH
Confidence            556666666532211 1111248888999999999999999886655         49999997542   2234556779


Q ss_pred             HHHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       140 ~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      +.+++.++||||+++++++...+..|+||||++|++|.+++..   ..+++..+..++.||+.||.|||++||+||||||
T Consensus        93 ~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  169 (321)
T 2c30_A           93 VVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS  169 (321)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9999999999999999999999999999999999999998865   3599999999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +|||++.++.+||+|||++......                                                       
T Consensus       170 ~NIll~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------------  194 (321)
T 2c30_A          170 DSILLTLDGRVKLSDFGFCAQISKD-------------------------------------------------------  194 (321)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSS-------------------------------------------------------
T ss_pred             HHEEECCCCcEEEeeeeeeeecccC-------------------------------------------------------
Confidence            9999999999999999997432210                                                       


Q ss_pred             cccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHH
Q 013016          300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR  379 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  379 (451)
                      ........||+.|+|||++.+..++.++|||||||++|+|++|+.||........+..+.........  .....+..+.
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~  272 (321)
T 2c30_A          195 VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLK--NSHKVSPVLR  272 (321)
T ss_dssp             SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCT--TGGGSCHHHH
T ss_pred             ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcC--ccccCCHHHH
Confidence            00112347999999999999989999999999999999999999999988887777777665432211  1122344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +||.+||+.||++|||    +.|+++||||++...
T Consensus       273 ~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~  303 (321)
T 2c30_A          273 DFLERMLVRDPQERAT----AQELLDHPFLLQTGL  303 (321)
T ss_dssp             HHHHHHSCSSTTTSCC----HHHHHTSGGGGGCCC
T ss_pred             HHHHHHccCChhhCcC----HHHHhcChhhccCCC
Confidence            9999999999999999    999999999988554

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.5e-48  Score=376.73  Aligned_cols=267  Identities=24%  Similarity=0.432  Sum_probs=220.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .++|.+.+.||+|+||.||+|.+..+++         .||+|++....... ......+.+|+.+++.++|+||++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   74 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLC---------RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV   74 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCC---------EEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCc---------EEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEE
Confidence            3789999999999999999999877665         49999998765432 2345677889999999999999999999


Q ss_pred             EE--eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~--~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +.  +.+..|+||||+.++ |.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        75 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~df  153 (305)
T 2wtk_C           75 LYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISAL  153 (305)
T ss_dssp             EECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecc
Confidence            84  456899999999665 878887766678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                     ........||+.|+||
T Consensus       154 g~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~aP  180 (305)
T 2wtk_C          154 GVAEALHPFAA-----------------------------------------------------DDTCRTSQGSPAFQPP  180 (305)
T ss_dssp             TTCEECCTTCS-----------------------------------------------------SCEECCCCSCGGGCCH
T ss_pred             ccccccCcccc-----------------------------------------------------ccccccCCCCCCCcCh
Confidence            99853221000                                                     0111134689999999


Q ss_pred             ccccCCCC--CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          316 EVASGGSH--GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       316 E~~~~~~~--~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |++.+...  +.++|||||||++|+|++|+.||......+....+......++..     .+..+.+||.+||+.||.+|
T Consensus       181 E~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~li~~~l~~dp~~R  255 (305)
T 2wtk_C          181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD-----CGPPLSDLLKGMLEYEPAKR  255 (305)
T ss_dssp             HHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSS-----SCHHHHHHHHHHTCSSTTTS
T ss_pred             hhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCc-----cCHHHHHHHHHHccCChhhC
Confidence            99987543  789999999999999999999999988888888887776554432     33489999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCCCCcccc
Q 013016          394 LGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      |+    +.|+++||||++......
T Consensus       256 ps----~~~ll~~~~~~~~~~~~~  275 (305)
T 2wtk_C          256 FS----IRQIRQHSWFRKKHPPAE  275 (305)
T ss_dssp             CC----HHHHHHSHHHHSCCCC-C
T ss_pred             CC----HHHHhcCcccccCCCCcC
Confidence            99    999999999998655443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=9.4e-49  Score=389.31  Aligned_cols=276  Identities=25%  Similarity=0.365  Sum_probs=216.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+..+++         .||||++.... ........+.+|+.+++.++||||+++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   93 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILER---------NVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVF   93 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCc---------eEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEee
Confidence            4789999999999999999999877665         49999997542 2233456677899999999999999999999


Q ss_pred             EeCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ...+      ..|+||||+. ++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  168 (371)
T 2xrw_A           94 TPQKSLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  168 (371)
T ss_dssp             CSCCSTTTCCEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             ccccccccccceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEE
Confidence            7665      7899999995 678887753    3899999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        ......+||+.|
T Consensus       169 ~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  192 (371)
T 2xrw_A          169 LDFGLARTAGTS--------------------------------------------------------FMMTPYVVTRYY  192 (371)
T ss_dssp             CCCCC------------------------------------------------------------------------CTT
T ss_pred             EEeecccccccc--------------------------------------------------------cccCCceecCCc
Confidence            999998422100                                                        011124789999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-------------------CC----
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-------------------QS----  369 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------------------~~----  369 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.........                   ..    
T Consensus       193 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (371)
T 2xrw_A          193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  272 (371)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCH
T ss_pred             cCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccch
Confidence            9999999999999999999999999999999999998887777777654322110                   00    


Q ss_pred             --------CCC------cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCCCCC
Q 013016          370 --------PSS------MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMR  429 (451)
Q Consensus       370 --------~~~------~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p~~~  429 (451)
                              .+.      ..+.++++||.+||+.||.+|||    ++|+|+||||+...........+|.+|...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~  342 (371)
T 2xrw_A          273 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPDKQ  342 (371)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCC----HHHHHHSHHHHTTCCHHHHTCCCCCCCTTT
T ss_pred             hhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCC----HHHHhCCcchhhhcCccccCCCCCCCCChh
Confidence                    000      01347899999999999999999    999999999998555555556666665543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.5e-48  Score=373.57  Aligned_cols=258  Identities=29%  Similarity=0.425  Sum_probs=213.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.++.         .||+|++.....  ......+.+|+.++++++||||+++++++.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   90 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGL---------ERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFE   90 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCc---------eEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHhee
Confidence            679999999999999999999887665         399999986532  223456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEec
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSD  234 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~D  234 (451)
                      +.+..|+||||+++++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~D  170 (285)
T 3is5_A           91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID  170 (285)
T ss_dssp             CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEe
Confidence            999999999999999999987543  23569999999999999999999999999999999999999   4567899999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                        .......||+.|+|
T Consensus       171 fg~a~~~~~~--------------------------------------------------------~~~~~~~~t~~y~a  194 (285)
T 3is5_A          171 FGLAELFKSD--------------------------------------------------------EHSTNAAGTALYMA  194 (285)
T ss_dssp             CCCCCC------------------------------------------------------------------CTTGGGCC
T ss_pred             eecceecCCc--------------------------------------------------------ccCcCcccccCcCC
Confidence            9998432110                                                        01112468999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++. ..++.++|||||||++|+|++|+.||......+....+......+.....  ..+.++.+||.+||+.||.+||
T Consensus       195 PE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rp  271 (285)
T 3is5_A          195 PEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR--PLTPQAVDLLKQMLTKDPERRP  271 (285)
T ss_dssp             HHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--C--CCCHHHHHHHHHHTCSCTTTSC
T ss_pred             hHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccC--cCCHHHHHHHHHHccCChhhCc
Confidence            99886 46899999999999999999999999998887777776665544433221  1344899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCC
Q 013016          395 GSKRGAADVKTHPFFKG  411 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~  411 (451)
                      +    +.|+|+||||++
T Consensus       272 s----~~e~l~hp~f~~  284 (285)
T 3is5_A          272 S----AAQVLHHEWFKQ  284 (285)
T ss_dssp             C----HHHHHTSGGGGC
T ss_pred             C----HHHHhcCHHhhc
Confidence            9    999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.9e-48  Score=375.88  Aligned_cols=267  Identities=27%  Similarity=0.379  Sum_probs=211.6

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|++.++||+|+||+||+|.+..+++         .||||++..... .......+.+|+.++++++||||+++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   71 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQ---------IVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVF   71 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCc---------EEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhhee
Confidence            3789999999999999999999987665         499999865432 233445677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+..++||||+++++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        72 ~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  149 (311)
T 4agu_A           72 RRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA  149 (311)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCeEEEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence            9999999999999999999887764  45999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                       .......||+.|+|||++
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~  174 (311)
T 4agu_A          150 RLLTGPS-------------------------------------------------------DYYDDEVATRWYRSPELL  174 (311)
T ss_dssp             EECC-------------------------------------------------------------------GGGCCHHHH
T ss_pred             hhccCcc-------------------------------------------------------cccCCCcCCccccChHHH
Confidence            5322100                                                       011123789999999999


Q ss_pred             cC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-------------------CCCCCC--C-----C
Q 013016          319 SG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-------------------TFPTQS--P-----S  371 (451)
Q Consensus       319 ~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-------------------~~~~~~--~-----~  371 (451)
                      .+ ..++.++|||||||++|+|++|+.||.+....+....+.....                   ..+...  .     .
T Consensus       175 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (311)
T 4agu_A          175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKF  254 (311)
T ss_dssp             HTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHC
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhc
Confidence            77 5679999999999999999999999998877766554432110                   011100  0     0


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      ...+.++.+||.+||++||.+|||    ++|+|+||||+++.+..
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          255 PNISYPALGLLKGCLHMDPTERLT----CEQLLHHPYFENIREIE  295 (311)
T ss_dssp             TTCCHHHHHHHHHHCCSSTTTSCC----HHHHHTSGGGTTCC---
T ss_pred             ccccHHHHHHHHHHccCChhhcCC----HHHHhcChHHHhccCHH
Confidence            123347899999999999999999    99999999999976643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.9e-49  Score=374.94  Aligned_cols=256  Identities=32%  Similarity=0.506  Sum_probs=220.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||.||+|.++.+..         .||+|++.....   .....+.+|+.++++++||||+++++++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   76 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRI---------RRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFE   76 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCc---------EEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            679999999999999999999887765         399999976532   23456777999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg  236 (451)
                      ..+..|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg  154 (277)
T 3f3z_A           77 DNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG  154 (277)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             cCCeEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecc
Confidence            999999999999999999988765  459999999999999999999999999999999999999   778899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        .......||+.|+|||
T Consensus       155 ~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aPE  178 (277)
T 3f3z_A          155 LAARFKPG--------------------------------------------------------KMMRTKVGTPYYVSPQ  178 (277)
T ss_dssp             TCEECCTT--------------------------------------------------------SCBCCCCSCTTTCCHH
T ss_pred             cceeccCc--------------------------------------------------------cchhccCCCCCccChH
Confidence            98432210                                                        0111237899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+. ++.++|||||||++|+|++|+.||......+....+..+...++....... +..+.+||.+||+.||.+||+ 
T Consensus       179 ~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~dp~~R~s-  255 (277)
T 3f3z_A          179 VLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV-SPQAESLIRRLLTKSPKQRIT-  255 (277)
T ss_dssp             HHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTS-CHHHHHHHHHHTCSSTTTSCC-
T ss_pred             Hhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcC-CHHHHHHHHHHccCChhhCcC-
Confidence            98764 899999999999999999999999999888888888888766654332233 338999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.++|+||||++
T Consensus       256 ---~~~~l~h~~~~~  267 (277)
T 3f3z_A          256 ---SLQALEHEWFEK  267 (277)
T ss_dssp             ---HHHHTTSHHHHH
T ss_pred             ---HHHHhcCHHHhc
Confidence               999999999987

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-48  Score=383.38  Aligned_cols=268  Identities=26%  Similarity=0.342  Sum_probs=212.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH--HHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK--KKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||||++.......  ......+.+|+.+++.++||||++++++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQ---------IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA   80 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCS---------EEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCc---------EEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEE
Confidence            789999999999999999999887655         49999997543222  1223467789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..++||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           81 FGHKSNISLVFDFME-TDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             ECCTTCCEEEEECCS-EEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             EeeCCceEEEEEcCC-CCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            999999999999995 5888887654 34689999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                       ......+||+.|+|||+
T Consensus       159 a~~~~~~~-------------------------------------------------------~~~~~~~~t~~y~aPE~  183 (346)
T 1ua2_A          159 AKSFGSPN-------------------------------------------------------RAYTHQVVTRWYRAPEL  183 (346)
T ss_dssp             GSTTTSCC-------------------------------------------------------CCCCCSCCCCTTCCHHH
T ss_pred             ceeccCCc-------------------------------------------------------ccCCcccccccccCchH
Confidence            85322100                                                       01112478999999999


Q ss_pred             ccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC-----------------------Cc
Q 013016          318 ASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS-----------------------SM  373 (451)
Q Consensus       318 ~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------~~  373 (451)
                      +.+. .++.++|||||||++|+|++|..||.+....+.+..+...........++                       ..
T Consensus       184 ~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (346)
T 1ua2_A          184 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSA  263 (346)
T ss_dssp             HTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTT
T ss_pred             hhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhcc
Confidence            9764 48999999999999999999999999988888777776532111111110                       12


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccc
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      .+.++.+||.+||+.||.+|||    +.|+|+||||++...+..
T Consensus       264 ~~~~~~~li~~~L~~dP~~Rpt----~~ell~h~~f~~~~~~~~  303 (346)
T 1ua2_A          264 AGDDLLDLIQGLFLFNPCARIT----ATQALKMKYFSNRPGPTP  303 (346)
T ss_dssp             CCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGGTSSSCCCC
T ss_pred             CCHHHHHHHHHHhccChhhCCC----HHHHhcChhhhcCCCCCC
Confidence            2348999999999999999999    999999999999766544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2e-48  Score=370.38  Aligned_cols=259  Identities=28%  Similarity=0.446  Sum_probs=217.0

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.+.||+|+||.||+|.++.+++         .||||++.............+.+|+.+++.++||||+++++
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~   78 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGH---------KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ   78 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCc---------eEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEE
Confidence            345889999999999999999999886655         49999998765555455667888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||
T Consensus        79 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg  156 (276)
T 2h6d_A           79 VISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG  156 (276)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCC
T ss_pred             EEecCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecc
Confidence            999999999999999999999998765  458999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        .......|++.|+|||
T Consensus       157 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  180 (276)
T 2h6d_A          157 LSNMMSDG--------------------------------------------------------EFLRTSCGSPNYAAPE  180 (276)
T ss_dssp             GGGCCCC---------------------------------------------------------------------CCTG
T ss_pred             cccccCCC--------------------------------------------------------cceecccCCccccCHH
Confidence            97432110                                                        0011236889999999


Q ss_pred             cccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..+ +.++||||||+++|+|++|+.||...........+..+....+..     .+..+.++|.+||+.||.+||+
T Consensus       181 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~li~~~l~~~p~~Rps  255 (276)
T 2h6d_A          181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY-----LNRSVATLLMHMLQVDPLKRAT  255 (276)
T ss_dssp             GGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchh-----cCHHHHHHHHHHccCChhhCCC
Confidence            9988765 689999999999999999999999888888877777765544432     3348999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.|+++||||++
T Consensus       256 ----~~~~l~h~~~~~  267 (276)
T 2h6d_A          256 ----IKDIREHEWFKQ  267 (276)
T ss_dssp             ----HHHHHHSHHHHT
T ss_pred             ----HHHHHhChhhcc
Confidence                999999999987

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=8.2e-49  Score=403.52  Aligned_cols=260  Identities=31%  Similarity=0.502  Sum_probs=222.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++.+.... ......+.+|+.++++++||||+++++++.
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   91 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQ---------EYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE   91 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCC---------EEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCC---------EEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEE
Confidence            679999999999999999999887665         4999999765432 223466778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc---cCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR---SDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg  236 (451)
                      ..+.+|+|||||.|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  169 (486)
T 3mwu_A           92 DSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (486)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred             cCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECC
Confidence            999999999999999999988765  4599999999999999999999999999999999999995   45679999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       170 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  193 (486)
T 3mwu_A          170 LSTCFQQN--------------------------------------------------------TKMKDRIGTAYYIAPE  193 (486)
T ss_dssp             CTTTBCCC------------------------------------------------------------CCTTGGGGCCGG
T ss_pred             cCeECCCC--------------------------------------------------------CccCCCcCCCCCCCHH
Confidence            98532210                                                        0111247999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+ .++.++|||||||++|+|++|+.||.+....+.+..+..+...++...+.... .++++||.+||++||.+||| 
T Consensus       194 ~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~t-  270 (486)
T 3mwu_A          194 VLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS-DDAKDLIRKMLTFHPSLRIT-  270 (486)
T ss_dssp             GGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSC-HHHHHHHHHHTCSSTTTSCC-
T ss_pred             HhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCC-HHHHHHHHHHcCCChhhCcC-
Confidence            9976 58999999999999999999999999999999999998887766554444333 38999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         +.++|+||||++..
T Consensus       271 ---~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          271 ---ATQCLEHPWIQKYS  284 (486)
T ss_dssp             ---HHHHHHCHHHHHTC
T ss_pred             ---HHHHhcCHhhccCc
Confidence               99999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.1e-48  Score=387.33  Aligned_cols=254  Identities=28%  Similarity=0.450  Sum_probs=204.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++.....    ....+.+|+.+++.++||||+++++++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~   86 (361)
T 3uc3_A           20 DRYDFVKDIGSGNFGVARLMRDKLTKE---------LVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVIL   86 (361)
T ss_dssp             TTEEEEEEESSSTTSSEEEEEETTTCC---------EEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCCCc---------EEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            789999999999999999999987665         499999975422    2245667999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC--EEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--IMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~Dfg~  237 (451)
                      ..+.+|+||||+.||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~  164 (361)
T 3uc3_A           87 TPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGY  164 (361)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCC
T ss_pred             eCCEEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCc
Confidence            999999999999999999998764  45999999999999999999999999999999999999987765  99999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.....                                                        .......+||+.|+|||+
T Consensus       165 a~~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~  188 (361)
T 3uc3_A          165 SKSSVL--------------------------------------------------------HSQPKSTVGTPAYIAPEV  188 (361)
T ss_dssp             C-----------------------------------------------------------------------CTTSCHHH
T ss_pred             cccccc--------------------------------------------------------cCCCCCCcCCCCcCChhh
Confidence            742110                                                        011123479999999999


Q ss_pred             ccCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          318 ASGGSHGNA-VDWWAFGIFIYEMIYGRTPFAAPSN----ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       318 ~~~~~~~~~-~DIwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +.+..++.+ +|||||||++|+|++|+.||.....    ...+..+......++...   ..+.++.+||.+||+.||.+
T Consensus       189 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~~li~~~L~~dP~~  265 (361)
T 3uc3_A          189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI---RISPECCHLISRIFVADPAT  265 (361)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTS---CCCHHHHHHHHHHSCSCTTT
T ss_pred             hcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcC---CCCHHHHHHHHHHccCChhH
Confidence            988887655 8999999999999999999987543    344555555554444321   23348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCC
Q 013016          393 RLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~  411 (451)
                      |||    +.||++||||.+
T Consensus       266 Rps----~~ell~hp~f~~  280 (361)
T 3uc3_A          266 RIS----IPEIKTHSWFLK  280 (361)
T ss_dssp             SCC----HHHHHTSHHHHT
T ss_pred             CcC----HHHHHhCcchhc
Confidence            999    999999999966

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.2e-49  Score=404.26  Aligned_cols=260  Identities=30%  Similarity=0.491  Sum_probs=218.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.++.         .||||++.+..... .....+.+|+.+++.++||||+++++++.
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~  106 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHV---------ERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFE  106 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCC---------EEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCc---------EEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            679999999999999999999987665         49999998654322 23456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~Dfg  236 (451)
                      +.+.+|+|||||.||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+|||
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG  184 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG  184 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECC
Confidence            999999999999999999888765  459999999999999999999999999999999999999764   459999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       185 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  208 (494)
T 3lij_A          185 LSAVFENQ--------------------------------------------------------KKMKERLGTAYYIAPE  208 (494)
T ss_dssp             TCEECBTT--------------------------------------------------------BCBCCCCSCTTTCCHH
T ss_pred             CCeECCCC--------------------------------------------------------ccccccCCCcCeeCHH
Confidence            98532210                                                        0111347999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++...+....+ .+++||.+||++||.+||| 
T Consensus       209 ~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dp~~R~s-  285 (494)
T 3lij_A          209 VLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE-GAKDLIKQMLQFDSQRRIS-  285 (494)
T ss_dssp             HHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCH-HHHHHHHHHTCSSTTTSCC-
T ss_pred             HHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCH-HHHHHHHHHCCCChhhCcc-
Confidence            9864 689999999999999999999999999999999999988877766554444444 8999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         +.|+|+||||++..
T Consensus       286 ---~~e~l~hp~~~~~~  299 (494)
T 3lij_A          286 ---AQQALEHPWIKEMC  299 (494)
T ss_dssp             ---HHHHHTCHHHHHHH
T ss_pred             ---HHHHhcCcccccCc
Confidence               99999999998843

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.6e-48  Score=371.40  Aligned_cols=267  Identities=26%  Similarity=0.429  Sum_probs=222.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH------HHHHHHHHHHHHHHHHHHHCC-CCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV------LEKKKKVHRAEMEKKILKMLD-HPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~e~~~l~~l~-h~nIv  152 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++....      .........+.+|+.+++++. ||||+
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~   87 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCK---------EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII   87 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCc---------eEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence            789999999999999999999987665         49999996432      112233456778999999995 99999


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ++++++...+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             eeeeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEE
Confidence            9999999999999999999999999999764  45999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......|++.|
T Consensus       166 ~dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  189 (298)
T 1phk_A          166 TDFGFSCQLDPG--------------------------------------------------------EKLREVCGTPSY  189 (298)
T ss_dssp             CCCTTCEECCTT--------------------------------------------------------CCBCCCCSCGGG
T ss_pred             ecccchhhcCCC--------------------------------------------------------cccccccCCccc
Confidence            999997432110                                                        011123689999


Q ss_pred             cCccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          313 VSPEVAS------GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       313 ~aPE~~~------~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +|||++.      ...++.++|||||||++|+|++|..||...........+..+...++...... .+..+.+||.+||
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l  268 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD-YSDTVKDLVSRFL  268 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGG-SCHHHHHHHHHHC
T ss_pred             cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccc-cCHHHHHHHHHHc
Confidence            9999985      45678999999999999999999999999888888888887766555433222 3448999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCCCccccc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGLNFALIR  418 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~  418 (451)
                      +.||.+||+    +.|+++||||++..+...+
T Consensus       269 ~~dp~~Rps----~~~ll~h~~~~~~~~~~~~  296 (298)
T 1phk_A          269 VVQPQKRYT----AEEALAHPFFQQYVVEEVR  296 (298)
T ss_dssp             CSSGGGSCC----HHHHTTSGGGCTTC-----
T ss_pred             cCCcccCCC----HHHHHhChHhhhccchhhc
Confidence            999999999    9999999999997765543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.8e-48  Score=402.78  Aligned_cols=263  Identities=28%  Similarity=0.451  Sum_probs=220.8

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH----------HHHHHHHHHHHHHHHCC
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK----------KKVHRAEMEKKILKMLD  147 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~  147 (451)
                      ..++|.+.++||+|+||+||+|.++.+++         .||||++.+......          ...+.+.+|+.+++.++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  104 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHS---------EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD  104 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCC---------EEEEEEEEC----------------CTHHHHHHHHHHHHTCC
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCc---------EEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC
Confidence            34789999999999999999999987765         499999986543221          23456788999999999


Q ss_pred             CCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       148 h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      ||||+++++++.+.+++|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus       105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  182 (504)
T 3q5i_A          105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK  182 (504)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST
T ss_pred             CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC
Confidence            999999999999999999999999999999988765  459999999999999999999999999999999999999977


Q ss_pred             C---CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          228 G---HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       228 ~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +   .+||+|||++......                                                        ....
T Consensus       183 ~~~~~~kl~Dfg~a~~~~~~--------------------------------------------------------~~~~  206 (504)
T 3q5i_A          183 NSLLNIKIVDFGLSSFFSKD--------------------------------------------------------YKLR  206 (504)
T ss_dssp             TCCSSEEECCCTTCEECCTT--------------------------------------------------------SCBC
T ss_pred             CCCccEEEEECCCCEEcCCC--------------------------------------------------------Cccc
Confidence            6   6999999998532210                                                        0111


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      ..+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++...+....+ ++++||++
T Consensus       207 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~  284 (504)
T 3q5i_A          207 DRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD-EAKELIKL  284 (504)
T ss_dssp             CCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCH-HHHHHHHH
T ss_pred             cccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCH-HHHHHHHH
Confidence            2479999999999875 689999999999999999999999999999999999988876655433333333 89999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      ||++||.+|||    +.|+|+||||++..
T Consensus       285 ~L~~dp~~R~t----~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          285 MLTYDYNKRCT----AEEALNSRWIKKYA  309 (504)
T ss_dssp             HTCSSTTTSCC----HHHHHTSHHHHHTC
T ss_pred             HcCCChhHCCC----HHHHhcCHhhhhch
Confidence            99999999999    99999999998743

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.1e-48  Score=383.84  Aligned_cols=266  Identities=17%  Similarity=0.269  Sum_probs=217.1

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      ....++|.+.+.||+|+||+||+|.+....+  .....+..||||++....  .......+.+|+.+++.+ +||||+++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~--~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~  152 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINL  152 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCST--TCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccC--cCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            3445789999999999999999999864322  112334569999997652  234456788899999999 89999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      ++++...+.+|+||||++||+|.+++....              ...+++..++.++.||+.||+|||++||+||||||+
T Consensus       153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  232 (370)
T 2psq_A          153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  232 (370)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchh
Confidence            999999999999999999999999998653              235899999999999999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                      |||++.++.+||+|||++........                                                     .
T Consensus       233 NIll~~~~~~kl~DFG~a~~~~~~~~-----------------------------------------------------~  259 (370)
T 2psq_A          233 NVLVTENNVMKIADFGLARDINNIDY-----------------------------------------------------Y  259 (370)
T ss_dssp             GEEECTTCCEEECCCSSCEETTCCCT-----------------------------------------------------T
T ss_pred             hEEECCCCCEEEccccCCcccCcccc-----------------------------------------------------e
Confidence            99999999999999999853321100                                                     0


Q ss_pred             ccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHH
Q 013016          301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR  379 (451)
Q Consensus       301 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  379 (451)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.+..+..+.....    +...+.++.
T Consensus       260 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~  335 (370)
T 2psq_A          260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK----PANCTNELY  335 (370)
T ss_dssp             CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC----CTTSCHHHH
T ss_pred             ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCCHHHH
Confidence            01112357888999999999999999999999999999999 9999999888877777766542211    122344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +||.+||+.||.+||+    +.|++++
T Consensus       336 ~li~~~l~~dP~~Rpt----~~ell~~  358 (370)
T 2psq_A          336 MMMRDCWHAVPSQRPT----FKQLVED  358 (370)
T ss_dssp             HHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHcCCChhhCcC----HHHHHHH
Confidence            9999999999999999    9998863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.3e-49  Score=406.27  Aligned_cols=261  Identities=31%  Similarity=0.488  Sum_probs=224.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++.+...........+.+|+.++++++||||+++++++.
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   96 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQ---------ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE   96 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCC---------EEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            679999999999999999999887665         49999997654333344566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg  236 (451)
                      ..+.+|+|||||.|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A           97 DKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred             eCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence            999999999999999999988765  559999999999999999999999999999999999999   467899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        ......+||+.|+|||
T Consensus       175 ~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE  198 (484)
T 3nyv_A          175 LSTHFEAS--------------------------------------------------------KKMKDKIGTAYYIAPE  198 (484)
T ss_dssp             HHHHBCCC--------------------------------------------------------CSHHHHTTGGGTCCHH
T ss_pred             eeEEcccc--------------------------------------------------------cccccCCCCccccCce
Confidence            98432110                                                        0111247999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+..+...++...+.... .++++||.+||++||.+||| 
T Consensus       199 ~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~s-  275 (484)
T 3nyv_A          199 VLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS-ESAKDLIRKMLTYVPSMRIS-  275 (484)
T ss_dssp             HHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSC-HHHHHHHHHHTCSSGGGSCC-
T ss_pred             eecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCC-HHHHHHHHHHCCCChhHCcC-
Confidence            9977 68999999999999999999999999999999999998887766544443333 48999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         +.|+|+||||+...
T Consensus       276 ---~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          276 ---ARDALDHEWIQTYT  289 (484)
T ss_dssp             ---HHHHHTSHHHHHHT
T ss_pred             ---HHHHhhChhhcccc
Confidence               99999999998743

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.1e-49  Score=384.29  Aligned_cols=264  Identities=24%  Similarity=0.363  Sum_probs=216.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.++++++||||+++++++.
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   82 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHR---------DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE   82 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCc---------eEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeee
Confidence            789999999999999999999877665         49999998765445555677888999999999999999999987


Q ss_pred             eCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          160 ASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       160 ~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ...    ..|+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        83 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Df  160 (311)
T 3ork_A           83 AETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF  160 (311)
T ss_dssp             EEETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred             ccCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeec
Confidence            654    459999999999999999765  45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    ........+||+.|+||
T Consensus       161 g~a~~~~~~~~----------------------------------------------------~~~~~~~~~gt~~y~aP  188 (311)
T 3ork_A          161 GIARAIADSGN----------------------------------------------------SVTQTAAVIGTAQYLSP  188 (311)
T ss_dssp             SCC----------------------------------------------------------------------CCTTCCH
T ss_pred             cCccccccccc----------------------------------------------------ccccccccCcCcccCCH
Confidence            99853221000                                                    00111234799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||...........+.......+...... .+.++.+||.+||+.||.+||+
T Consensus       189 E~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dP~~R~~  267 (311)
T 3ork_A          189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG-LSADLDAVVLKALAKNPENRYQ  267 (311)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT-CCHHHHHHHHHHTCSSGGGSCS
T ss_pred             HHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC-CCHHHHHHHHHHHhcCHhhChh
Confidence            999999999999999999999999999999999888887777766654433222222 3348999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.+++.|+|++.
T Consensus       268 ----~~~~l~~~l~~~  279 (311)
T 3ork_A          268 ----TAAEMRADLVRV  279 (311)
T ss_dssp             ----SHHHHHHHHHHH
T ss_pred             ----hHHHHHHHHHHH
Confidence                999999999875

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=3.4e-48  Score=374.46  Aligned_cols=257  Identities=30%  Similarity=0.492  Sum_probs=220.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++.....   .....+.+|+.++++++||||+++++++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGK---------LFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYE   76 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCC---------EEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcc
Confidence            679999999999999999999886655         499999975432   22345677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg  236 (451)
                      ..+..|+||||++|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg  154 (304)
T 2jam_A           77 STTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG  154 (304)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred             cCCEEEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCC
Confidence            999999999999999999988764  459999999999999999999999999999999999999   778899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.....                                                         .......||+.|+|||
T Consensus       155 ~~~~~~~---------------------------------------------------------~~~~~~~~~~~y~aPE  177 (304)
T 2jam_A          155 LSKMEQN---------------------------------------------------------GIMSTACGTPGYVAPE  177 (304)
T ss_dssp             TTCCCCC---------------------------------------------------------BTTHHHHSCCCBCCTT
T ss_pred             cceecCC---------------------------------------------------------CccccccCCCCccChH
Confidence            9742110                                                         0011236899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..++.++|||||||++|+|++|+.||........+..+..+...++........ .++.+||.+||+.||.+||+ 
T Consensus       178 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps-  255 (304)
T 2jam_A          178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDIS-ESAKDFICHLLEKDPNERYT-  255 (304)
T ss_dssp             TBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSC-HHHHHHHHHHHCSSTTTSCC-
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCC-HHHHHHHHHHcCCChhHCcC-
Confidence            9999999999999999999999999999999988888888888877665554444433 48999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCC
Q 013016          397 KRGAADVKTHPFFKGL  412 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~  412 (451)
                         +.|+++||||++.
T Consensus       256 ---~~~~l~h~~~~~~  268 (304)
T 2jam_A          256 ---CEKALSHPWIDGN  268 (304)
T ss_dssp             ---HHHHHTSHHHHSS
T ss_pred             ---HHHHhcCccccCC
Confidence               9999999999873

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3e-48  Score=382.53  Aligned_cols=270  Identities=26%  Similarity=0.335  Sum_probs=216.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.++.+++         .||||++..... .......+.+|+.+++.++||||+++++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   85 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQ---------KVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEIC   85 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCC---------EEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCC---------EEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhhee
Confidence            4789999999999999999999977665         499999865432 122234566799999999999999999999


Q ss_pred             Ee--------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EA--------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~--------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ..        .+.+|+||||+. ++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus        86 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~  163 (351)
T 3mi9_A           86 RTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL  163 (351)
T ss_dssp             EEC--------CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             eccccccccCCceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCE
Confidence            87        457899999995 57777766543 459999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++.........                                                   .........||+
T Consensus       164 kl~Dfg~a~~~~~~~~~---------------------------------------------------~~~~~~~~~gt~  192 (351)
T 3mi9_A          164 KLADFGLARAFSLAKNS---------------------------------------------------QPNRYTNRVVTL  192 (351)
T ss_dssp             EECCCTTCEECCCCSSS---------------------------------------------------SCCCCCSSCSCG
T ss_pred             EEccchhcccccccccc---------------------------------------------------cccccCCccccc
Confidence            99999998543211100                                                   011112347899


Q ss_pred             CccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCc----------------
Q 013016          311 EYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM----------------  373 (451)
Q Consensus       311 ~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------  373 (451)
                      .|+|||++.+ ..++.++|||||||++|+|++|+.||.+......+..+.......+...++..                
T Consensus       193 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (351)
T 3mi9_A          193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK  272 (351)
T ss_dssp             GGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCC
T ss_pred             CccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccc
Confidence            9999999987 45799999999999999999999999998888777766654333333222221                


Q ss_pred             -----------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          374 -----------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       374 -----------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                                 .+..+.+||.+||++||++|||    +.|+|+||||+....+
T Consensus       273 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          273 RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDALNHDFFWSDPMP  321 (351)
T ss_dssp             CCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGGSSSCC
T ss_pred             cCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----HHHHhCCCCcCCCCCc
Confidence                       1346899999999999999999    9999999999985553

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.7e-48  Score=392.25  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=211.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC------CCCCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML------DHPFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~nIv~  153 (451)
                      .+|++.++||+|+||+||+|.+..+++         .||||++....    .....+..|+.+++.+      .|+||++
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~---------~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~  163 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQ---------HVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIH  163 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTE---------EEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCC
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCc---------EEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEE
Confidence            679999999999999999999887655         49999997542    2234455677777776      5789999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC--EE
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--IM  231 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~--~k  231 (451)
                      +++++...+++|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.  +|
T Consensus       164 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vk  242 (429)
T 3kvw_A          164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIK  242 (429)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEE
T ss_pred             EEeecccCCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceE
Confidence            999999999999999999 579999998876677999999999999999999999999999999999999999987  99


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.....                                                          .....+||+.
T Consensus       243 L~DFG~a~~~~~----------------------------------------------------------~~~~~~gt~~  264 (429)
T 3kvw_A          243 VIDFGSSCYEHQ----------------------------------------------------------RVYTYIQSRF  264 (429)
T ss_dssp             ECCCTTCEETTC----------------------------------------------------------CCCSSCSCGG
T ss_pred             EeecccceecCC----------------------------------------------------------cccccCCCCC
Confidence            999999742210                                                          1113478999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCC-----------------------
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-----------------------  368 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-----------------------  368 (451)
                      |+|||++.+..++.++|||||||++|||++|+.||.+....+.+..+.......+..                       
T Consensus       265 y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (429)
T 3kvw_A          265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTV  344 (429)
T ss_dssp             GCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCE
T ss_pred             ccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccc
Confidence            999999999999999999999999999999999999988877766655321100000                       


Q ss_pred             ------------------------C-------CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          369 ------------------------S-------PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       369 ------------------------~-------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                                              .       .....+.++.+||.+||++||++|||    +.|+|+||||++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt----a~e~L~Hpw~~~  414 (429)
T 3kvw_A          345 TTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT----PGQALRHPWLRR  414 (429)
T ss_dssp             ECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSTTTC-
T ss_pred             cccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC----HHHHhCChhhcc
Confidence                                    0       00112447899999999999999999    999999999998

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5e-48  Score=383.27  Aligned_cols=260  Identities=29%  Similarity=0.469  Sum_probs=218.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH-----HHHHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-----LEKKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      ++|.+.+.||.|+||.||+|.++.+++         .||||++....     .........+..|+.+++++ +||||++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  164 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGH---------EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT  164 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCc---------EEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            579999999999999999999976655         39999987542     11223345677899999998 7999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      +++++...+..|+||||+.|++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+|||++.+|.+||+
T Consensus       165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             EEEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEE
Confidence            999999999999999999999999998764  459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        ......+||+.|+
T Consensus       243 DfG~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y~  266 (365)
T 2y7j_A          243 DFGFSCHLEPG--------------------------------------------------------EKLRELCGTPGYL  266 (365)
T ss_dssp             CCTTCEECCTT--------------------------------------------------------CCBCCCCSCGGGC
T ss_pred             ecCcccccCCC--------------------------------------------------------cccccCCCCCCcc
Confidence            99997432210                                                        0112347999999


Q ss_pred             CcccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          314 SPEVASG------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       314 aPE~~~~------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |||++.+      ..++.++|||||||++|+|++|+.||........+..+..+...++...+... +..+.+||.+||+
T Consensus       267 aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~li~~~L~  345 (365)
T 2y7j_A          267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR-SSTVKDLISRLLQ  345 (365)
T ss_dssp             CHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSS-CHHHHHHHHHHSC
T ss_pred             ChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC-CHHHHHHHHHHcC
Confidence            9999863      35788999999999999999999999998888888888777655443222222 3389999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .||++||+    +.|+|+||||++
T Consensus       346 ~dP~~Rps----~~ell~hp~f~r  365 (365)
T 2y7j_A          346 VDPEARLT----AEQALQHPFFER  365 (365)
T ss_dssp             SSTTTSCC----HHHHHHSGGGCC
T ss_pred             CChhHCcC----HHHHhcCcccCC
Confidence            99999999    999999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.9e-48  Score=378.04  Aligned_cols=268  Identities=28%  Similarity=0.432  Sum_probs=209.3

Q ss_pred             CCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           80 RDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      +.|.+. +.||+|+||+||+|.+..+++         .||||++....   ......+.+|+.++.++ +||||++++++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~   79 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQ---------EYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEF   79 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCC---------EEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCc---------EEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            679985 789999999999999876655         49999997542   22345667799999885 79999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC---EEEec
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSD  234 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~---~kl~D  234 (451)
                      +.+.+.+|+||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D  157 (316)
T 2ac3_A           80 FEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD  157 (316)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred             EeeCCEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEE
Confidence            99999999999999999999998775  45999999999999999999999999999999999999998776   99999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++..........                                                ..........+||+.|+|
T Consensus       158 fg~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~gt~~y~a  189 (316)
T 2ac3_A          158 FDLGSGIKLNGDCS------------------------------------------------PISTPELLTPCGSAEYMA  189 (316)
T ss_dssp             TTCCC-------------------------------------------------------------------CCSGGGCC
T ss_pred             ccCccccccCCccc------------------------------------------------cccccccccccCCcCccC
Confidence            99974321100000                                                000001112479999999


Q ss_pred             cccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh---------------HHHHHHHhcCCCCCCCCCCCCcC
Q 013016          315 PEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---------------ETTLRNIVKKPLTFPTQSPSSMS  374 (451)
Q Consensus       315 PE~~~~-----~~~~~~~DIwSlG~il~elltg~~pf~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~~  374 (451)
                      ||++.+     ..++.++|||||||++|+|++|+.||.....               ...+..+..+...++....... 
T Consensus       190 PE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-  268 (316)
T 2ac3_A          190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHI-  268 (316)
T ss_dssp             HHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTS-
T ss_pred             hHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccC-
Confidence            999875     4578999999999999999999999987542               3355666666655543222222 


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +.++.+||.+||+.||.+|||    +.|+|+||||++...
T Consensus       269 ~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          269 SCAAKDLISKLLVRDAKQRLS----AAQVLQHPWVQGCAP  304 (316)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCC----HHHHHHSTTCC----
T ss_pred             CHHHHHHHHHHhhCChhhCCC----HHHHhcChhhcCCCC
Confidence            338999999999999999999    999999999998543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-48  Score=386.43  Aligned_cols=261  Identities=27%  Similarity=0.384  Sum_probs=208.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||||++.... ........+.+|+.+++.++||||+++++++.
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~   94 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGA---------KVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFT   94 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCC---------EEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCC---------EEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEe
Confidence            789999999999999999999887665         49999996542 22344566778999999999999999999997


Q ss_pred             eCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..+      .+|+||||+ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  170 (367)
T 1cm8_A           95 PDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL  170 (367)
T ss_dssp             SCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             cCCccccCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEE
Confidence            663      569999999 9999999876   459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          .....+||+.|+
T Consensus       171 Dfg~a~~~~~----------------------------------------------------------~~~~~~~t~~y~  192 (367)
T 1cm8_A          171 DFGLARQADS----------------------------------------------------------EMTGYVVTRWYR  192 (367)
T ss_dssp             CCTTCEECCS----------------------------------------------------------SCCSSCSCGGGC
T ss_pred             eeeccccccc----------------------------------------------------------ccCcCcCCCCcC
Confidence            9999843210                                                          011247899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC-----------------------CCC
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-----------------------TQS  369 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~-----------------------~~~  369 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......+                       ...
T Consensus       193 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (367)
T 1cm8_A          193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKD  272 (367)
T ss_dssp             CTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCC
T ss_pred             CHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCC
Confidence            9999987 6789999999999999999999999998887776666554211111                       000


Q ss_pred             ---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          370 ---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       370 ---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                         .....+.++.+||.+||..||.+|||    +.|+|+||||+++....
T Consensus       273 ~~~~~~~~~~~~~~ll~~mL~~dP~~R~t----~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          273 FASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPYFESLHDTE  318 (367)
T ss_dssp             GGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTC---
T ss_pred             HHHHCCCCCHHHHHHHHHHccCChhHCCC----HHHHhcChHHHhhcCCc
Confidence               00122448999999999999999999    99999999999976543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-48  Score=377.20  Aligned_cols=253  Identities=23%  Similarity=0.319  Sum_probs=200.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHH-HCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK-MLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~nIv~l~~~~  158 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++.......... .....|+..+. ..+|+||+++++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~-~~~~~e~~~~~~~~~h~~iv~l~~~~  126 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGR---------LYAVKRSMSPFRGPKDR-ARKLAEVGSHEKVGQHPCCVRLEQAW  126 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSC---------EEEEEEESSSCCSHHHH-HHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCe---------EEEEEEecccccChHHH-HHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            569999999999999999999986655         49999986543222222 23334454444 45999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+.+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a  204 (311)
T 3p1a_A          127 EEGGILYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL  204 (311)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred             EeCCEEEEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceee
Confidence            9999999999999 889998887653 46999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                        .......||+.|+|||++
T Consensus       205 ~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~  228 (311)
T 3p1a_A          205 VELGTA--------------------------------------------------------GAGEVQEGDPRYMAPELL  228 (311)
T ss_dssp             EECC--------------------------------------------------------------CCCCCGGGCCGGGG
T ss_pred             eecccC--------------------------------------------------------CCCcccCCCccccCHhHh
Confidence            432210                                                        011123689999999998


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+ .++.++|||||||++|||++|..|+...   .....+..+...  ..... ..+.++.+||.+||++||++|||   
T Consensus       229 ~~-~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~~--~~~~~-~~~~~l~~li~~~L~~dP~~Rpt---  298 (311)
T 3p1a_A          229 QG-SYGTAADVFSLGLTILEVACNMELPHGG---EGWQQLRQGYLP--PEFTA-GLSSELRSVLVMMLEPDPKLRAT---  298 (311)
T ss_dssp             GT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCCC--HHHHT-TSCHHHHHHHHHHSCSSTTTSCC---
T ss_pred             cC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCCC--ccccc-CCCHHHHHHHHHHcCCChhhCcC---
Confidence            86 7899999999999999999997776543   333344333221  11111 23348999999999999999999   


Q ss_pred             ChHHHHcCCCcCC
Q 013016          399 GAADVKTHPFFKG  411 (451)
Q Consensus       399 ~~~ell~hp~~~~  411 (451)
                       +.|||+||||++
T Consensus       299 -~~ell~hp~~~~  310 (311)
T 3p1a_A          299 -AEALLALPVLRQ  310 (311)
T ss_dssp             -HHHHHTSGGGSC
T ss_pred             -HHHHHhCccccC
Confidence             999999999986

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.1e-47  Score=389.23  Aligned_cols=287  Identities=24%  Similarity=0.326  Sum_probs=207.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++.... ........+.+|+.+++.++|+||+++++++.
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~   95 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEK---------NVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLII   95 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTE---------EEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCc---------EEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence            789999999999999999999987765         49999997542 23344567788999999999999999999997


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     +.+|+||||+ +++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~D  172 (432)
T 3n9x_A           96 PDDLLKFDELYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCD  172 (432)
T ss_dssp             CSCTTTCCCEEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             cCCCCcCCeEEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEcc
Confidence            66     5799999999 57999998764  5599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++................                          ...     .+  ..............+||+.|+|
T Consensus       173 FGla~~~~~~~~~~~~~~~~--------------------------~~~-----~~--~~~~~~~~~~~~~~~gt~~Y~A  219 (432)
T 3n9x_A          173 FGLARTINSEKDTNIVNDLE--------------------------ENE-----EP--GPHNKNLKKQLTSHVVTRWYRA  219 (432)
T ss_dssp             CTTCEEC----------------------------------------------------------------CCCCCTTCC
T ss_pred             CCCccccccccccccccccc--------------------------ccc-----cc--cccccchhccccCCCCCccccC
Confidence            99986543211100000000                          000     00  0000000112234689999999


Q ss_pred             cccc-cCCCCCcchhHHHHHHHHHHHHhC-----------CCCCCCCC-----------------hHHHHHHHhcCCCC-
Q 013016          315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYG-----------RTPFAAPS-----------------NETTLRNIVKKPLT-  364 (451)
Q Consensus       315 PE~~-~~~~~~~~~DIwSlG~il~elltg-----------~~pf~~~~-----------------~~~~~~~i~~~~~~-  364 (451)
                      ||++ .+..++.++|||||||++|||++|           .++|.+.+                 ....+..+...... 
T Consensus       220 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p  299 (432)
T 3n9x_A          220 PELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP  299 (432)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSC
T ss_pred             HHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCC
Confidence            9986 455689999999999999999984           44443322                 01122222110000 


Q ss_pred             -------------------CCCCC-------CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccc
Q 013016          365 -------------------FPTQS-------PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       365 -------------------~~~~~-------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                                         .+...       .+. .+.++.+||.+||++||++|||    ++|+|+||||+++++...
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~  373 (432)
T 3n9x_A          300 TEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS-ISDDGINLLESMLKFNPNKRIT----IDQALDHPYLKDVRKKKL  373 (432)
T ss_dssp             CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTT-SCHHHHHHHHHHSCSSTTTSCC----HHHHHTCGGGTTTCCTTT
T ss_pred             CHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCC-CCHHHHHHHHHHhcCCcccCCC----HHHHhcChhhhhccCccc
Confidence                               00000       012 3448999999999999999999    999999999999888654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.2e-48  Score=373.30  Aligned_cols=264  Identities=28%  Similarity=0.453  Sum_probs=221.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||+|++........   ...+.+.+|+.++++++||||+++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   75 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGK---------EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD   75 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCC---------eeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhh
Confidence            679999999999999999999987655         399999976532211   12456778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl  232 (451)
                      ++...+..++||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl  153 (283)
T 3bhy_A           76 IFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL  153 (283)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred             eecCCCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEE
Confidence            999999999999999999999998764  4599999999999999999999999999999999999999877    8999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......|++.|
T Consensus       154 ~dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  177 (283)
T 3bhy_A          154 IDFGIAHKIEAG--------------------------------------------------------NEFKNIFGTPEF  177 (283)
T ss_dssp             CCCTTCEECC----------------------------------------------------------------CCCGGG
T ss_pred             EecccceeccCC--------------------------------------------------------CcccccCCCcCc
Confidence            999998432110                                                        001123689999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +|||++.+..++.++||||||+++|+|++|..||......+.+..+.......+...... .+..+.+||.+||+.||.+
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~  256 (283)
T 3bhy_A          178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN-TSELAKDFIRRLLVKDPKR  256 (283)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT-CCHHHHHHHHTTSCSSGGG
T ss_pred             cCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc-CCHHHHHHHHHHccCCHhH
Confidence            999999998999999999999999999999999999888888888777655444322222 2338999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCcc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ||+    +.|+++||||+++...
T Consensus       257 Rps----~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          257 RMT----IAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             SCC----HHHHHHCHHHHHHHHC
T ss_pred             CcC----HHHHHhCHHHHHHHHH
Confidence            999    9999999999986544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.5e-48  Score=392.42  Aligned_cols=264  Identities=28%  Similarity=0.473  Sum_probs=206.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----HHHHHHHHHHHHHHHHHCCCCCccc
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----KKKKVHRAEMEKKILKMLDHPFLPT  153 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~nIv~  153 (451)
                      .++|.+.++||+|+||+||+|.++.+.+         .||||++.+....     .......+.+|+.++++++||||++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  204 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCK---------KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK  204 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCc---------EEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEee
Confidence            3789999999999999999999987765         4999999865422     1223345678999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---CE
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HI  230 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---~~  230 (451)
                      +++++.. +..|+||||+++|+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++   .+
T Consensus       205 l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~  281 (419)
T 3i6u_A          205 IKNFFDA-EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI  281 (419)
T ss_dssp             CCEEEES-SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred             EEEEEec-CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceE
Confidence            9999864 5589999999999999988764  5699999999999999999999999999999999999997554   59


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                        ......+||+
T Consensus       282 kl~DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~  305 (419)
T 3i6u_A          282 KITDFGHSKILGET--------------------------------------------------------SLMRTLCGTP  305 (419)
T ss_dssp             EECCSSTTTSCC-------------------------------------------------------------------C
T ss_pred             EEeecccceecCCC--------------------------------------------------------ccccccCCCC
Confidence            99999998532110                                                        1112357999


Q ss_pred             CccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          311 EYVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       311 ~y~aPE~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      .|+|||++.+   ..++.++|||||||++|+|++|+.||...... .....+..+...+....+... +..+.+||.+||
T Consensus       306 ~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~li~~~L  384 (419)
T 3i6u_A          306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV-SEKALDLVKKLL  384 (419)
T ss_dssp             TTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTS-CHHHHHHHHHHS
T ss_pred             CccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhccc-CHHHHHHHHHHc
Confidence            9999999864   56788999999999999999999999875443 334445555444332222222 338999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      +.||.+||+    +.|+|+||||++.++.
T Consensus       385 ~~dP~~Rps----~~e~l~hp~~~~~~~~  409 (419)
T 3i6u_A          385 VVDPKARFT----TEEALRHPWLQDEDMK  409 (419)
T ss_dssp             CSSTTTSCC----HHHHHHSGGGCCHHHH
T ss_pred             cCChhHCcC----HHHHhCCcccCChhHH
Confidence            999999999    9999999999986553

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3e-48  Score=373.34  Aligned_cols=263  Identities=22%  Similarity=0.336  Sum_probs=212.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.+..+++         .||+|++.............+.+|+.++++++||||+++++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNI---------KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCS---------EEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCC---------eEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee
Confidence            3779999999999999999999887665         4999998654434445567788899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ...+.+|+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  158 (294)
T 4eqm_A           81 EEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA  158 (294)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred             eeCCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence            9999999999999999999999875  46999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ......                                                      .........||+.|+|||++
T Consensus       159 ~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~~  184 (294)
T 4eqm_A          159 KALSET------------------------------------------------------SLTQTNHVLGTVQYFSPEQA  184 (294)
T ss_dssp             TTC-------------------------------------------------------------------CCSSCCHHHH
T ss_pred             cccccc------------------------------------------------------cccccCccccCccccCHhHh
Confidence            532110                                                      00111234799999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..++.++|||||||++|+|++|+.||.+..........................+..+.++|.+||+.||.+||+   
T Consensus       185 ~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~---  261 (294)
T 4eqm_A          185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYK---  261 (294)
T ss_dssp             HTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCS---
T ss_pred             cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccc---
Confidence            99999999999999999999999999999988777666666554332211112223448999999999999999996   


Q ss_pred             ChHHHHcCCCcC
Q 013016          399 GAADVKTHPFFK  410 (451)
Q Consensus       399 ~~~ell~hp~~~  410 (451)
                       ..+.+.+.|..
T Consensus       262 -~~~~l~~~l~~  272 (294)
T 4eqm_A          262 -TIQEMKDDLSS  272 (294)
T ss_dssp             -SHHHHHHHHHT
T ss_pred             -cHHHHHHHHHH
Confidence             44445554443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.2e-47  Score=364.74  Aligned_cols=260  Identities=25%  Similarity=0.413  Sum_probs=213.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||||++.....  ......+.+|+.+++.++||||+++++++.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEE---------AVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRR   75 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCc---------EEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEE
Confidence            679999999999999999999886655         499999975432  233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  153 (276)
T 2yex_A           76 EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT  153 (276)
T ss_dssp             ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCcc
Confidence            999999999999999999988654  459999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                     ..........|++.|+|||++.
T Consensus       154 ~~~~~-----------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~  180 (276)
T 2yex_A          154 VFRYN-----------------------------------------------------NRERLLNKMCGTLPYVAPELLK  180 (276)
T ss_dssp             ECEET-----------------------------------------------------TEECCBCCCCSCGGGCCGGGGT
T ss_pred             ccCCC-----------------------------------------------------cchhcccCCccccCccChHHHh
Confidence            32100                                                     0001112347899999999998


Q ss_pred             CCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          320 GGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       320 ~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +..+ +.++|||||||++|+|++|+.||...... ..+..+.......+.   ....+..+.+||.+||+.||.+|||  
T Consensus       181 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps--  255 (276)
T 2yex_A          181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKIDSAPLALLHKILVENPSARIT--  255 (276)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCC--
T ss_pred             cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCc---hhhcCHHHHHHHHHHCCCCchhCCC--
Confidence            8765 77999999999999999999999876543 334444443322211   1123448999999999999999999  


Q ss_pred             CChHHHHcCCCcCCC
Q 013016          398 RGAADVKTHPFFKGL  412 (451)
Q Consensus       398 ~~~~ell~hp~~~~~  412 (451)
                        +.|+++||||++.
T Consensus       256 --~~~il~~~~~~~~  268 (276)
T 2yex_A          256 --IPDIKKDRWYNKP  268 (276)
T ss_dssp             --HHHHTTCTTTTCC
T ss_pred             --HHHHhcCccccCh
Confidence              9999999999983

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.3e-47  Score=377.85  Aligned_cols=257  Identities=25%  Similarity=0.338  Sum_probs=216.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.+.+.||+|+||+||+|.+..+++         .||||++.............+.+|+.++++++||||+++++++.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  124 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL  124 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCe---------EEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            459999999999999999999876655         49999997543334455667888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+. |+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       125 ~~~~~~lv~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  202 (348)
T 1u5q_A          125 REHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  202 (348)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred             ECCeEEEEEecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence            9999999999995 68888775432 569999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                           ....+||+.|+|||++.
T Consensus       203 ~~~~-----------------------------------------------------------~~~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          203 IMAP-----------------------------------------------------------ANSFVGTPYWMAPEVIL  223 (348)
T ss_dssp             SSSS-----------------------------------------------------------BCCCCSCGGGCCHHHHH
T ss_pred             ecCC-----------------------------------------------------------CCcccCCcceeCHhhhc
Confidence            2210                                                           11247999999999985


Q ss_pred             ---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 ---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                         +..++.++|||||||++|||++|+.||...+....+..+........   .....+..+.+||.+||+.||++||| 
T Consensus       224 ~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps-  299 (348)
T 1u5q_A          224 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPT-  299 (348)
T ss_dssp             TTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCC-
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcC-
Confidence               46689999999999999999999999998887777777666543221   12233458999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCC
Q 013016          397 KRGAADVKTHPFFKGLN  413 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~  413 (451)
                         +.+|++||||....
T Consensus       300 ---~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          300 ---SEVLLKHRFVLRER  313 (348)
T ss_dssp             ---HHHHTTCHHHHSCC
T ss_pred             ---HHHHhhChhhhccC
Confidence               99999999998743

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=5.6e-48  Score=379.81  Aligned_cols=269  Identities=24%  Similarity=0.406  Sum_probs=224.4

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHH--------------HHHHHHHHHH
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK--------------VHRAEMEKKI  142 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--------------~~~~~~e~~~  142 (451)
                      ...++|.+.+.||+|+||.||+|.+  +++         .||||++..........              ...+.+|+.+
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   96 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNK---------FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI   96 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTE---------EEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHH
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCc---------eEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHH
Confidence            3458899999999999999999998  332         49999998664332211              1677789999


Q ss_pred             HHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhh------hhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeec
Q 013016          143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL------RHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYR  215 (451)
Q Consensus       143 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~------l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~  215 (451)
                      +++++||||+++++++.+.+..|+||||+++++|.++      +.......+++..++.++.||+.||.|||+ +||+||
T Consensus        97 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~  176 (348)
T 2pml_X           97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR  176 (348)
T ss_dssp             HTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence            9999999999999999999999999999999999998      665445779999999999999999999999 999999


Q ss_pred             cCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccc
Q 013016          216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV  295 (451)
Q Consensus       216 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (451)
                      ||||+|||++.++.+||+|||++......                                                   
T Consensus       177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---------------------------------------------------  205 (348)
T 2pml_X          177 DVKPSNILMDKNGRVKLSDFGESEYMVDK---------------------------------------------------  205 (348)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECBTT---------------------------------------------------
T ss_pred             CCChHhEEEcCCCcEEEeccccccccccc---------------------------------------------------
Confidence            99999999999999999999998432110                                                   


Q ss_pred             cccccccccccccCCCccCcccccCC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCC--
Q 013016          296 AEPVAARSCSFVGTHEYVSPEVASGG-SHGN-AVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSP--  370 (451)
Q Consensus       296 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~--  370 (451)
                            ......|+..|+|||++.+. .++. ++|||||||++|+|++|+.||..... .+.+..+..+...++....  
T Consensus       206 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  279 (348)
T 2pml_X          206 ------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHF  279 (348)
T ss_dssp             ------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSS
T ss_pred             ------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhh
Confidence                  11124789999999999887 5666 99999999999999999999998776 7777777777655553211  


Q ss_pred             ------------CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccc
Q 013016          371 ------------SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       371 ------------~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                                  ....+.++.+||.+||+.||.+||+    +.|+++||||++.++...
T Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps----~~e~l~hp~f~~~~~~~~  334 (348)
T 2pml_X          280 LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT----SEDALKHEWLADTNIEDL  334 (348)
T ss_dssp             TTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGTTCCHHHH
T ss_pred             hccccccccccchhhcCHHHHHHHHHHccCChhhCCC----HHHHhcCccccCCCHHHH
Confidence                        0223458999999999999999999    999999999999887654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2e-48  Score=379.82  Aligned_cols=269  Identities=21%  Similarity=0.360  Sum_probs=204.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||||++....  .....+.+.+|+.++++++||||+++++++.
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   74 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWL   74 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCC---------EEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCc---------EEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            689999999999999999999986665         49999997542  2234466788999999999999999999986


Q ss_pred             eCC---------------------------------------------------------eEEEEEeeccCCchhhhhhh
Q 013016          160 ASN---------------------------------------------------------FSCIVMEFCSGGDLHSLRHK  182 (451)
Q Consensus       160 ~~~---------------------------------------------------------~~~lV~E~~~ggsL~~~l~~  182 (451)
                      +.+                                                         +.|+|||||+|++|.+++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  154 (332)
T 3qd2_B           75 ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR  154 (332)
T ss_dssp             ECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred             EeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence            543                                                         48999999999999999987


Q ss_pred             CCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCC
Q 013016          183 QPH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRS  261 (451)
Q Consensus       183 ~~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~  261 (451)
                      ... ...++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++............           
T Consensus       155 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~-----------  223 (332)
T 3qd2_B          155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV-----------  223 (332)
T ss_dssp             CCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------------
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc-----------
Confidence            532 33567779999999999999999999999999999999999999999999998644321110000           


Q ss_pred             cccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 013016          262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY  341 (451)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt  341 (451)
                                                      .............+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       224 --------------------------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  271 (332)
T 3qd2_B          224 --------------------------------LTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY  271 (332)
T ss_dssp             ----------------------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHS
T ss_pred             --------------------------------cccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHH
Confidence                                            000000111223579999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          342 GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       342 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      |..|+..  .......+........   . .....++.+||.+||+.||.+|||    +.|+|+||||+++
T Consensus       272 ~~~~~~~--~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~~l~~~p~~Rps----~~~~l~~~~f~~~  332 (332)
T 3qd2_B          272 SFSTQME--RVRIITDVRNLKFPLL---F-TQKYPQEHMMVQDMLSPSPTERPE----ATDIIENAIFENL  332 (332)
T ss_dssp             CCCCHHH--HHHHHHHHHTTCCCHH---H-HHHCHHHHHHHHHHHCSSGGGSCC----HHHHHHSTTCCCC
T ss_pred             cCCChhH--HHHHHHHhhccCCCcc---c-ccCChhHHHHHHHHccCCCCcCCC----HHHHhhchhhhcC
Confidence            8776532  2223333333322110   0 111237899999999999999999    9999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=4.3e-48  Score=383.87  Aligned_cols=261  Identities=24%  Similarity=0.342  Sum_probs=199.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||||++.... ........+.+|+.+++.++||||+++++++.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   98 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGL---------RVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   98 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTE---------EEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCC---------EEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            789999999999999999999877665         49999996542 22334566778999999999999999999996


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..      ...|+|||++ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        99 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~  174 (367)
T 2fst_X           99 PARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL  174 (367)
T ss_dssp             SCSSGGGCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCCccccCCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEe
Confidence            54      5789999999 8999998865   459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          .....+||+.|+
T Consensus       175 DFG~a~~~~~----------------------------------------------------------~~~~~~~t~~y~  196 (367)
T 2fst_X          175 DFGLARHTAD----------------------------------------------------------EMTGYVATRWYR  196 (367)
T ss_dssp             C-------------------------------------------------------------------------CCCTTC
T ss_pred             eccccccccc----------------------------------------------------------cCCCcCcCcCcc
Confidence            9999842110                                                          011247899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC--------------------CCCCC-
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP--------------------TQSPS-  371 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~--------------------~~~~~-  371 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......+                    ..... 
T Consensus       197 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (367)
T 2fst_X          197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN  276 (367)
T ss_dssp             CHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCC
T ss_pred             ChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCC
Confidence            9999987 6789999999999999999999999999887776666554211110                    00000 


Q ss_pred             -----CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          372 -----SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       372 -----~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                           ...+..+.+||.+||+.||.+|||    +.|+|+||||++...+.
T Consensus       277 ~~~~~~~~~~~~~dLl~~mL~~dP~~R~t----~~e~L~hp~~~~~~~~~  322 (367)
T 2fst_X          277 FANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHAYFAQYHDPD  322 (367)
T ss_dssp             HHHHTTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTTCCGG
T ss_pred             HHHHCCCCCHHHHHHHHHhCCCCcccCcC----HHHHhcChhhhhccCCC
Confidence                 012347899999999999999999    99999999999866544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.9e-48  Score=388.05  Aligned_cols=280  Identities=22%  Similarity=0.292  Sum_probs=200.9

Q ss_pred             CCceE-EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           80 RDFDL-HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~-~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +.|.+ .++||+|+||+||+|.++....       +..||||++....     ....+.+|+.+++.++||||+++++++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~-------~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~   87 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKD-------DKDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVF   87 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSC-------CCCEEEEECSSSS-----CCHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCC-------CeEEEEEEECCCC-----CCHHHHHHHHHHHhcCCCCeeeEeeEE
Confidence            44777 4579999999999999764321       1249999997542     123466799999999999999999999


Q ss_pred             Ee--CCeEEEEEeeccCCchhhhhhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE----c
Q 013016          159 EA--SNFSCIVMEFCSGGDLHSLRHKQ-------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV----R  225 (451)
Q Consensus       159 ~~--~~~~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll----~  225 (451)
                      ..  ...+||||||+ +++|.+++...       ....+++..++.|+.||+.||+|||++||+||||||+||||    +
T Consensus        88 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~  166 (405)
T 3rgf_A           88 LSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP  166 (405)
T ss_dssp             EETTTTEEEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSST
T ss_pred             ecCCCCeEEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCC
Confidence            54  67999999999 56888776532       12349999999999999999999999999999999999999    6


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.+||+|||++........                                                    .......
T Consensus       167 ~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------------~~~~~~~  194 (405)
T 3rgf_A          167 ERGRVKIADMGFARLFNSPLK----------------------------------------------------PLADLDP  194 (405)
T ss_dssp             TTTCEEECCTTCCC------------------------------------------------------------------
T ss_pred             CCCcEEEEECCCceecCCCCc----------------------------------------------------ccccCCC
Confidence            778999999999853321000                                                    0011123


Q ss_pred             cccCCCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHhcCCCCCCCCCCCCc--
Q 013016          306 FVGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---------ETTLRNIVKKPLTFPTQSPSSM--  373 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~---------~~~~~~i~~~~~~~~~~~~~~~--  373 (451)
                      .+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+...         .+.+..+.......+...+...  
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~  274 (405)
T 3rgf_A          195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKK  274 (405)
T ss_dssp             --CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGG
T ss_pred             ceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhc
Confidence            5899999999999884 489999999999999999999999976543         2344444332211111111100  


Q ss_pred             -------------------------------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCC
Q 013016          374 -------------------------------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP  422 (451)
Q Consensus       374 -------------------------------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~  422 (451)
                                                     .+..+.+||.+||++||.+|||    +.|+|+||||++..++.......
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~t----a~e~L~hp~f~~~~~~~~~~~~~  350 (405)
T 3rgf_A          275 MPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT----SEQAMQDPYFLEDPLPTSDVFAG  350 (405)
T ss_dssp             STTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTSSSCCCSSTTTT
T ss_pred             CcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCC----HHHHhcChhhccCCCCccccccc
Confidence                                           0237899999999999999999    99999999999987776655555


Q ss_pred             CCCCCC
Q 013016          423 PEIPGM  428 (451)
Q Consensus       423 ~~~p~~  428 (451)
                      ..+|..
T Consensus       351 ~~~~~~  356 (405)
T 3rgf_A          351 CQIPYP  356 (405)
T ss_dssp             SCCCC-
T ss_pred             CCCCCC
Confidence            555543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.2e-47  Score=370.82  Aligned_cols=255  Identities=25%  Similarity=0.396  Sum_probs=204.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ++|++.++||+|+||+||+|.+..+++         .||||++....      ...+.+|+.+++.+. |+||+++++++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~  100 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNE---------KVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIV  100 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCc---------EEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeee
Confidence            789999999999999999999877665         49999997432      245667999999997 99999999999


Q ss_pred             Ee--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEecc
Q 013016          159 EA--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDF  235 (451)
Q Consensus       159 ~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Df  235 (451)
                      ..  ....++||||+.+++|.+++..     +++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+||
T Consensus       101 ~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Df  175 (330)
T 3nsz_A          101 KDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW  175 (330)
T ss_dssp             ECTTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccCCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeC
Confidence            88  6789999999999999998754     89999999999999999999999999999999999999777 8999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                        .......|+..|+||
T Consensus       176 g~a~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  199 (330)
T 3nsz_A          176 GLAEFYHPG--------------------------------------------------------QEYNVRVASRYFKGP  199 (330)
T ss_dssp             TTCEECCTT--------------------------------------------------------CCCCSCCSCGGGCCH
T ss_pred             CCceEcCCC--------------------------------------------------------CccccccccccccCh
Confidence            998532210                                                        011123688999999


Q ss_pred             ccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhc-------------CCCCCC--------------
Q 013016          316 EVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVK-------------KPLTFP--------------  366 (451)
Q Consensus       316 E~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~-------------~~~~~~--------------  366 (451)
                      |++.+ ..++.++|||||||++|+|++|+.||.... ..+.+..+..             ......              
T Consensus       200 E~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (330)
T 3nsz_A          200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR  279 (330)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCC
T ss_pred             hhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccc
Confidence            99987 668999999999999999999999995533 2222222211             111100              


Q ss_pred             -----CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          367 -----TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       367 -----~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                           ........+.++.+||.+||++||.+|||    ++|+|+||||+++..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----a~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          280 WERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREAMEHPYFYTVVK  328 (330)
T ss_dssp             GGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC----HHHHHTSGGGTTCC-
T ss_pred             hhhhccccccccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCccHhhhcc
Confidence                 00011113458999999999999999999    999999999999754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.8e-48  Score=378.78  Aligned_cols=267  Identities=27%  Similarity=0.340  Sum_probs=214.6

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.+.||+|+||.||+|.+..+++         .||||++..... .......+.+|+.++++++||||++++++
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   92 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGR---------IVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEV   92 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCC---------EEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCc---------eEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEE
Confidence            34789999999999999999999987665         499999865422 22334556779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+||||+.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        93 ~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  170 (331)
T 4aaa_A           93 CKKKKRWYLVFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGF  170 (331)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             eecCCEEEEEEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCC
Confidence            99999999999999999998876654  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                       ........||+.|+|||+
T Consensus       171 ~~~~~~~-------------------------------------------------------~~~~~~~~~t~~y~aPE~  195 (331)
T 4aaa_A          171 ARTLAAP-------------------------------------------------------GEVYDDEVATRWYRAPEL  195 (331)
T ss_dssp             C-------------------------------------------------------------------CCCCCTTCCHHH
T ss_pred             ceeecCC-------------------------------------------------------ccccCCCcCCccccCccc
Confidence            8432110                                                       001112368999999999


Q ss_pred             ccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-------------------CCCCCCC-------
Q 013016          318 ASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-------------------TFPTQSP-------  370 (451)
Q Consensus       318 ~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-------------------~~~~~~~-------  370 (451)
                      +.+. .++.++|||||||++|+|++|+.||......+.+..+.....                   ..+....       
T Consensus       196 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (331)
T 4aaa_A          196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERR  275 (331)
T ss_dssp             HTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHH
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhc
Confidence            9875 689999999999999999999999998877766655542111                   0110000       


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ....+..+.+||.+||+.||++|||    +.|||+||||+..++.
T Consensus       276 ~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~~  316 (331)
T 4aaa_A          276 YPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHDFFQMDGFA  316 (331)
T ss_dssp             STTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHGGGHH
T ss_pred             ccchhHHHHHHHHHHhccCcccCCC----HHHHhcCchhccCChh
Confidence            0123448999999999999999999    9999999999986654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-47  Score=376.08  Aligned_cols=257  Identities=27%  Similarity=0.427  Sum_probs=205.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC--CCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH--PFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~nIv~l~~~  157 (451)
                      ++|++.+.||+|+||.||+|.+..+.          .||||++..... .......+.+|+.+++.++|  +||++++++
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~----------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   77 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQ----------IYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   77 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSC----------EEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCC----------EEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeee
Confidence            67999999999999999999875432          499999975432 23445667889999999976  999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+++|+|||+ .+++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||+
T Consensus        78 ~~~~~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~  153 (343)
T 3dbq_A           78 EITDQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI  153 (343)
T ss_dssp             EECSSEEEEEECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred             EeeCCEEEEEEeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeeccc
Confidence            9999999999995 589999999875  5699999999999999999999999999999999999997 78899999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                     .........+||+.|+|||+
T Consensus       154 a~~~~~~-----------------------------------------------------~~~~~~~~~~gt~~y~aPE~  180 (343)
T 3dbq_A          154 ANQMQPD-----------------------------------------------------TTSVVKDSQVGTVNYMPPEA  180 (343)
T ss_dssp             SCCC-----------------------------------------------------------------CCCCSSCCHHH
T ss_pred             ccccCcc-----------------------------------------------------cccccCCCCcCCcCcCCHHH
Confidence            8532110                                                     00111123479999999999


Q ss_pred             ccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          318 ASG-----------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       318 ~~~-----------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +.+           ..++.++|||||||++|+|++|+.||...... ..+..+........   .+...+.++.+||.+|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~  257 (343)
T 3dbq_A          181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---FPDIPEKDLQDVLKCC  257 (343)
T ss_dssp             HHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC---CCCCSCHHHHHHHHHH
T ss_pred             HhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC---CcccCCHHHHHHHHHH
Confidence            865           56899999999999999999999999875443 44455544332221   1223344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      |+.||.+|||    +.|+|+||||+.
T Consensus       258 L~~dp~~Rpt----~~e~l~hp~~~~  279 (343)
T 3dbq_A          258 LKRDPKQRIS----IPELLAHPYVQI  279 (343)
T ss_dssp             TCSSTTTSCC----HHHHHTSHHHHS
T ss_pred             cCCChhHCCC----HHHHHhCccccc
Confidence            9999999999    999999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=9.3e-48  Score=385.16  Aligned_cols=263  Identities=28%  Similarity=0.431  Sum_probs=207.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+|.+.++||+|+||+||+|.+..+..          ||+|.+....       ....+|+.+++.++||||+++++++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~----------~aikk~~~~~-------~~~~~E~~il~~l~h~niv~l~~~~  101 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE----------VAIKKVLQDK-------RFKNRELQIMRIVKHPNVVDLKAFF  101 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE----------EEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe----------EEEEEEecCc-------chHHHHHHHHHhCCCCCcceEEEEE
Confidence            3679999999999999999999876653          8888876432       1122589999999999999999999


Q ss_pred             EeCC------eEEEEEeeccCCchhhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc-cCCCE
Q 013016          159 EASN------FSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHI  230 (451)
Q Consensus       159 ~~~~------~~~lV~E~~~ggsL~~~l~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~-~~~~~  230 (451)
                      ...+      ++|+||||++++.+..+.. ......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+
T Consensus       102 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~  181 (394)
T 4e7w_A          102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVL  181 (394)
T ss_dssp             EEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEE
T ss_pred             EecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcE
Confidence            6543      4899999996654433332 12235699999999999999999999999999999999999999 78999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                        ......+||+
T Consensus       182 kL~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~t~  205 (394)
T 4e7w_A          182 KLIDFGSAKILIAG--------------------------------------------------------EPNVSYICSR  205 (394)
T ss_dssp             EECCCTTCEECCTT--------------------------------------------------------CCCCSSCSCG
T ss_pred             EEeeCCCcccccCC--------------------------------------------------------CCCcccccCc
Confidence            99999998532110                                                        0111347899


Q ss_pred             CccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-----------------CCCCCC---
Q 013016          311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-----------------TFPTQS---  369 (451)
Q Consensus       311 ~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----------------~~~~~~---  369 (451)
                      .|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.....                 .++...   
T Consensus       206 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (394)
T 4e7w_A          206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP  285 (394)
T ss_dssp             GGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCC
T ss_pred             CccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCc
Confidence            99999999875 489999999999999999999999999887777666654211                 111100   


Q ss_pred             ----CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccccc
Q 013016          370 ----PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIR  418 (451)
Q Consensus       370 ----~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~  418 (451)
                          .....+.++.+||.+||++||.+|||    +.|+++||||+++.+....
T Consensus       286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~~~~~  334 (394)
T 4e7w_A          286 FSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIEALCHPFFDELRTGEAR  334 (394)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGSTTTSSCCC
T ss_pred             HHHhccccCCHHHHHHHHHHhCCChhhCCC----HHHHhcChhhhhhcccccc
Confidence                01113448999999999999999999    9999999999998776543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.6e-47  Score=363.27  Aligned_cols=255  Identities=24%  Similarity=0.405  Sum_probs=209.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.+.++||+|+||+||+|.+..+..         .||+|++...... ......+.+|+.+++.++||||+++++++.
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---------~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   95 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTV---------EVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWE   95 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCce---------EEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeec
Confidence            459999999999999999999887665         4999999765432 334567788999999999999999999987


Q ss_pred             e----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEc-cCCCEEE
Q 013016          160 A----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVR-SDGHIML  232 (451)
Q Consensus       160 ~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~-~~~~~kl  232 (451)
                      .    ...+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++|  |+||||||+|||++ .++.+||
T Consensus        96 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl  173 (290)
T 1t4h_A           96 STVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI  173 (290)
T ss_dssp             EESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred             cccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEE
Confidence            5    46799999999999999999875  45899999999999999999999999  99999999999998 7899999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++.....                                                         .......||+.|
T Consensus       174 ~Dfg~~~~~~~---------------------------------------------------------~~~~~~~~t~~y  196 (290)
T 1t4h_A          174 GDLGLATLKRA---------------------------------------------------------SFAKAVIGTPEF  196 (290)
T ss_dssp             CCTTGGGGCCT---------------------------------------------------------TSBEESCSSCCC
T ss_pred             eeCCCcccccc---------------------------------------------------------cccccccCCcCc
Confidence            99999742110                                                         011124689999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +|||++.+ .++.++|||||||++|+|++|+.||........ ...+..+.....   .+...+.++.+||.+||+.||.
T Consensus       197 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          197 MAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS---FDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             CCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG---GGGCCCHHHHHHHHHHSCSSGG
T ss_pred             CCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccc---cCCCCCHHHHHHHHHHccCChh
Confidence            99998875 589999999999999999999999988555444 444443322111   1122234899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCC
Q 013016          392 NRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +|||    +.||++||||++
T Consensus       273 ~Rps----~~ell~h~~f~~  288 (290)
T 1t4h_A          273 ERYS----IKDLLNHAFFQE  288 (290)
T ss_dssp             GSCC----HHHHHTSGGGC-
T ss_pred             hCCC----HHHHhhCccccc
Confidence            9999    999999999987

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.2e-47  Score=378.45  Aligned_cols=263  Identities=22%  Similarity=0.309  Sum_probs=211.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++....  .......+.+|+.++++++||||+++++++.
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   95 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKV---------RVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIR   95 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEEC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCe---------EEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEe
Confidence            579999999999999999999887665         49999997432  2334466778999999999999999999997


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     ...|+||||+ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~~~~~~~iv~e~~-~~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~D  171 (364)
T 3qyz_A           96 APTIEQMKDVYIVQDLM-ETDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD  171 (364)
T ss_dssp             CSSTTTCCCEEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             cCCccccceEEEEEccc-CcCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEe
Confidence            65     4789999999 5699998876   3599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++........                                                    ........+||+.|+|
T Consensus       172 fg~a~~~~~~~~----------------------------------------------------~~~~~~~~~gt~~y~a  199 (364)
T 3qyz_A          172 FGLARVADPDHD----------------------------------------------------HTGFLTEYVATRWYRA  199 (364)
T ss_dssp             CTTCEECCGGGC----------------------------------------------------BCCTTCCCCSCGGGCC
T ss_pred             CcceEecCCCCC----------------------------------------------------ccccccccccccCCCC
Confidence            999853221000                                                    0011123479999999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC--------------------CCCC---
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP--------------------TQSP---  370 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~--------------------~~~~---  370 (451)
                      ||++.+ ..++.++|||||||++|+|++|+.||.+....+.+..+.......+                    ....   
T Consensus       200 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (364)
T 3qyz_A          200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW  279 (364)
T ss_dssp             HHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCH
T ss_pred             CHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCH
Confidence            998765 4589999999999999999999999998877766666543111110                    0000   


Q ss_pred             ---CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          371 ---SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       371 ---~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                         ....+.++.+||.+||++||.+|||    +.|+|+||||++..
T Consensus       280 ~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          280 NRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGTTTC
T ss_pred             HHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcchhhcc
Confidence               0112348999999999999999999    99999999999953

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.9e-48  Score=380.50  Aligned_cols=250  Identities=26%  Similarity=0.448  Sum_probs=207.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH-----HHHHHHHHHHHHHHHCCCCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK-----KKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++........     .....+.+|+.++++++||||+++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~   94 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNK---------EVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV   94 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTE---------EEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCc---------EEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            679999999999999999999887765         499999986532211     123345569999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCC-chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          155 YAEFEASNFSCIVMEFCSGG-DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ++++.+.+.+++||||+.+| +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        95 ~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  172 (335)
T 3dls_A           95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI  172 (335)
T ss_dssp             EEEEECSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EEEEeeCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEe
Confidence            99999999999999999666 999988775  459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        ......+||+.|+
T Consensus       173 Dfg~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y~  196 (335)
T 3dls_A          173 DFGSAAYLERG--------------------------------------------------------KLFYTFCGTIEYC  196 (335)
T ss_dssp             CCTTCEECCTT--------------------------------------------------------CCBCEECSCGGGC
T ss_pred             ecccceECCCC--------------------------------------------------------CceeccCCCcccc
Confidence            99998532210                                                        0111347999999


Q ss_pred             CcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       314 aPE~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      |||++.+..+ +.++|||||||++|+|++|+.||.....      ........+     ...+.++.+||.+||+.||.+
T Consensus       197 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~-----~~~~~~l~~li~~~L~~dP~~  265 (335)
T 3dls_A          197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIHPP-----YLVSKELMSLVSGLLQPVPER  265 (335)
T ss_dssp             CHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCCCS-----SCCCHHHHHHHHHHTCSSGGG
T ss_pred             ChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccCCC-----cccCHHHHHHHHHHccCChhh
Confidence            9999998876 8899999999999999999999976221      222222222     223448999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCC
Q 013016          393 RLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~  411 (451)
                      |||    +.++++||||++
T Consensus       266 Rps----~~ell~hp~~~~  280 (335)
T 3dls_A          266 RTT----LEKLVTDPWVTQ  280 (335)
T ss_dssp             SCC----HHHHHHCTTTTC
T ss_pred             CcC----HHHHhcCccccC
Confidence            999    999999999987

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=6.6e-48  Score=381.40  Aligned_cols=263  Identities=29%  Similarity=0.424  Sum_probs=216.0

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||+||+|.+..+++         .||+|++....  .......+.+|+.+++.++||||+++++
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~   98 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVSHKPSGL---------VMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYG   98 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEE
T ss_pred             cccccceeeeeecCCCCeEEEEEEECCCCc---------EEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeE
Confidence            445789999999999999999999886655         49999997542  2334466778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEecc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++..++..|+||||++|++|.+++...  ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+||
T Consensus        99 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Df  176 (360)
T 3eqc_A           99 AFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF  176 (360)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEEC
Confidence            999999999999999999999999875  4599999999999999999999985 9999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                         .......||+.|+||
T Consensus       177 g~~~~~~~---------------------------------------------------------~~~~~~~gt~~y~aP  199 (360)
T 3eqc_A          177 GVSGQLID---------------------------------------------------------SMANSFVGTRSYMSP  199 (360)
T ss_dssp             CCCHHHHH---------------------------------------------------------HC----CCCCTTCCH
T ss_pred             CCCccccc---------------------------------------------------------ccccCCCCCCCeECH
Confidence            99732100                                                         011134789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-------------------------------------
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI-------------------------------------  358 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i-------------------------------------  358 (451)
                      |++.+..++.++|||||||++|+|++|+.||......+....+                                     
T Consensus       200 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (360)
T 3eqc_A          200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFE  279 (360)
T ss_dssp             HHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHH
T ss_pred             HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchh
Confidence            9999999999999999999999999999999876654432221                                     


Q ss_pred             -----hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          359 -----VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       359 -----~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                           .....   ........+.++.+||.+||++||++|||    +.|+|+||||++.++..
T Consensus       280 ~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~~~  335 (360)
T 3eqc_A          280 LLDYIVNEPP---PKLPSGVFSLEFQDFVNKCLIKNPAERAD----LKQLMVHAFIKRSDAEE  335 (360)
T ss_dssp             HHHHHHHSCC---CCCCTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHHTSHHHHHHHHSC
T ss_pred             hhhHHhccCC---CCCCcccccHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhcchHhh
Confidence                 11111   11112223458999999999999999999    99999999999855543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.3e-47  Score=373.06  Aligned_cols=259  Identities=24%  Similarity=0.374  Sum_probs=211.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEecc-ccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC------Ccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNN-KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP------FLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------nIv  152 (451)
                      ++|++.+.||+|+||+||+|.+.. +++         .||||++....    .....+..|+.+++.++|+      +|+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~---------~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~   80 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGR---------HVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCV   80 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTE---------EEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBC
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCc---------EEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeE
Confidence            689999999999999999999843 333         59999997532    2345566788888888654      599


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc------
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS------  226 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~------  226 (451)
                      ++++++...++.|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.      
T Consensus        81 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  159 (339)
T 1z57_A           81 QMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEA  159 (339)
T ss_dssp             CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEE
T ss_pred             eeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccc
Confidence            9999999999999999999 999999998876667999999999999999999999999999999999999987      


Q ss_pred             -------------CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcc
Q 013016          227 -------------DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL  293 (451)
Q Consensus       227 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (451)
                                   ++.+||+|||++.....                                                  
T Consensus       160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--------------------------------------------------  189 (339)
T 1z57_A          160 YNPKIKRDERTLINPDIKVVDFGSATYDDE--------------------------------------------------  189 (339)
T ss_dssp             EC----CEEEEESCCCEEECCCSSCEETTS--------------------------------------------------
T ss_pred             cCCccccccccccCCCceEeeCcccccCcc--------------------------------------------------
Confidence                         67899999999742110                                                  


Q ss_pred             cccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC------
Q 013016          294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT------  367 (451)
Q Consensus       294 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------  367 (451)
                              ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.......+.      
T Consensus       190 --------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  261 (339)
T 1z57_A          190 --------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKT  261 (339)
T ss_dssp             --------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred             --------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Confidence                    011247899999999999999999999999999999999999999987776655444322111110      


Q ss_pred             ---------------------------------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          368 ---------------------------------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       368 ---------------------------------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                                                       .......+.++.+||.+||+.||.+|||    +.|+++||||+++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~  337 (339)
T 1z57_A          262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT----LREALKHPFFDLLKK  337 (339)
T ss_dssp             SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGGGC
T ss_pred             cchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC----HHHHhcCHHHHHHhc
Confidence                                             0011122347889999999999999999    999999999998543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.2e-47  Score=380.74  Aligned_cols=259  Identities=27%  Similarity=0.427  Sum_probs=208.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC--CCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD--HPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~nIv~l~~~  157 (451)
                      ++|.+.++||+|+||+||+|.+.. ++         .||||++..... .......+.+|+.+++++.  |+||++++++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~---------~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~  124 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQ---------IYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY  124 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CC---------EEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CC---------EEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEE
Confidence            569999999999999999998765 22         499999975532 2344567788999999996  5999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+.+||||| +.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+
T Consensus       125 ~~~~~~~~lv~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~  200 (390)
T 2zmd_A          125 EITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI  200 (390)
T ss_dssp             EECSSEEEEEEE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred             EecCCEEEEEEe-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCc
Confidence            999999999999 5589999999875  4689999999999999999999999999999999999995 68999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                     .........+||+.|+|||+
T Consensus       201 a~~~~~~-----------------------------------------------------~~~~~~~~~~gt~~y~aPE~  227 (390)
T 2zmd_A          201 ANQMQPD-----------------------------------------------------TTSVVKDSQVGAVNYMPPEA  227 (390)
T ss_dssp             SCCC--------------------------------------------------------------CCSCCCGGGCCHHH
T ss_pred             cccccCC-----------------------------------------------------CccccCCCCCcCCCccChHH
Confidence            8532110                                                     00011123479999999999


Q ss_pred             ccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          318 ASG-----------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       318 ~~~-----------~~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +.+           ..++.++|||||||++|+|++|+.||..... ...+..+.........   +...+.++.+||.+|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~  304 (390)
T 2zmd_A          228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF---PDIPEKDLQDVLKCC  304 (390)
T ss_dssp             HHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCC---CCCSCHHHHHHHHHH
T ss_pred             hhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCC---CccchHHHHHHHHHH
Confidence            875           3688999999999999999999999987543 3556666654433222   122344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      |+.||.+||+    +.|||+||||+...
T Consensus       305 L~~dP~~Rps----~~ell~hp~~~~~~  328 (390)
T 2zmd_A          305 LKRDPKQRIS----IPELLAHPYVQIQT  328 (390)
T ss_dssp             TCSSTTTSCC----HHHHHTSHHHHSCC
T ss_pred             cccChhhCCC----HHHHhhCcCccccC
Confidence            9999999999    99999999998743

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-47  Score=372.66  Aligned_cols=261  Identities=26%  Similarity=0.380  Sum_probs=212.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++....    .....+.+|+.+++++ +||||+++++++
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHVKTGQ---------LAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCCCC---------eEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            789999999999999999999876655         49999986432    2234566799999998 799999999999


Q ss_pred             Ee------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 EA------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~~------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ..      .+.+|+||||+.+++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl  170 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL  170 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEE
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEE
Confidence            87      568999999999999999998766567999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                       ........||+.|
T Consensus       171 ~Dfg~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y  195 (326)
T 2x7f_A          171 VDFGVSAQLDRT-------------------------------------------------------VGRRNTFIGTPYW  195 (326)
T ss_dssp             CCCTTTC--------------------------------------------------------------------CCGGG
T ss_pred             eeCcCceecCcC-------------------------------------------------------ccccccccCCccc
Confidence            999997432110                                                       0011134789999


Q ss_pred             cCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          313 VSPEVAS-----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       313 ~aPE~~~-----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +|||++.     +..++.++|||||||++|+|++|..||...........+........   .....+..+.+||.+||.
T Consensus       196 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~  272 (326)
T 2x7f_A          196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL---KSKKWSKKFQSFIESCLV  272 (326)
T ss_dssp             CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---SCSCSCHHHHHHHHHHCC
T ss_pred             cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC---CccccCHHHHHHHHHHhc
Confidence            9999987     45689999999999999999999999998877776666655433211   122334589999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      .||.+||+    +.++++||||++....
T Consensus       273 ~dp~~Rps----~~~ll~hp~~~~~~~~  296 (326)
T 2x7f_A          273 KNHSQRPA----TEQLMKHPFIRDQPNE  296 (326)
T ss_dssp             SSGGGSCC----HHHHHTSHHHHCCTTH
T ss_pred             cChhhCCC----HHHHhhChHHhhCccc
Confidence            99999999    9999999999986553

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.9e-47  Score=384.72  Aligned_cols=259  Identities=25%  Similarity=0.407  Sum_probs=205.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|.+.+.||+|+||+||+|.++.+++         .||||++....       ....+|+++++.++|+||++++++|.
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---------~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~  117 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGE---------LVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFY  117 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCc---------EEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEe
Confidence            569999999999999999999987655         49999986431       12235999999999999999999985


Q ss_pred             eC------CeEEEEEeeccCCchhhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCE
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRHK--QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHI  230 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~  230 (451)
                      ..      .++++||||++ ++|.+++..  .....+++..++.++.||+.||+|||++||+||||||+||||+.+ +.+
T Consensus       118 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~  196 (420)
T 1j1b_A          118 SSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL  196 (420)
T ss_dssp             EEETTTTEEEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEE
T ss_pred             ccCCCCcceeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeE
Confidence            42      25789999995 466665543  234569999999999999999999999999999999999999965 578


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||+++.....                                                        ......+||+
T Consensus       197 kl~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~t~  220 (420)
T 1j1b_A          197 KLCDFGSAKQLVRG--------------------------------------------------------EPNVSYICSR  220 (420)
T ss_dssp             EECCCTTCEECCTT--------------------------------------------------------CCCCSCCSCT
T ss_pred             EeccchhhhhcccC--------------------------------------------------------CCceeeeeCC
Confidence            99999998532110                                                        0111347899


Q ss_pred             CccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-----------------CCCCCCC---
Q 013016          311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP-----------------LTFPTQS---  369 (451)
Q Consensus       311 ~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-----------------~~~~~~~---  369 (451)
                      .|+|||++.+. .++.++|||||||+||||++|+.||.+.+..+.+.+++...                 ..++...   
T Consensus       221 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~  300 (420)
T 1j1b_A          221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP  300 (420)
T ss_dssp             TSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCC
T ss_pred             CcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCC
Confidence            99999999875 68999999999999999999999999988777666655411                 1111110   


Q ss_pred             ----CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 ----PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ----~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                          .....+.++.+||.+||++||.+||+    +.|+|+||||+++...
T Consensus       301 ~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          301 WTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSFFDELRDP  346 (420)
T ss_dssp             HHHHSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGGGGGCT
T ss_pred             HHHhcCCCCCHHHHHHHHHhccCChhHCCC----HHHHhCCHhhcccccc
Confidence                01122448999999999999999999    9999999999886544

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=3.7e-47  Score=366.37  Aligned_cols=262  Identities=27%  Similarity=0.416  Sum_probs=215.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||+|++....   ......+..|+.+++.++||||+++++++.
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~---------~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   86 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGA---------LAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYY   86 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCC---------EEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCc---------EEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeee
Confidence            679999999999999999999987655         49999997542   234466778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||++.
T Consensus        87 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           87 HDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA  165 (302)
T ss_dssp             CC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred             eCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence            9999999999999999999887642 459999999999999999999999999999999999999999999999999863


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       .........||+.|+|||++.
T Consensus       166 ~~~~-------------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          166 KNLK-------------------------------------------------------TLQKRDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             HHHH-------------------------------------------------------HHHC-----CCGGGCCHHHHH
T ss_pred             cccc-------------------------------------------------------cccccccccCChhhcCCeeec
Confidence            1100                                                       000111247899999999983


Q ss_pred             -----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          320 -----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       320 -----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                           +..++.++|||||||++|+|++|+.||........+..+........  ..+...+..+.+||.+||+.||.+||
T Consensus       191 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rp  268 (302)
T 2j7t_A          191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVEFRDFLKIALDKNPETRP  268 (302)
T ss_dssp             HHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SSGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred             cccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc--CCccccCHHHHHHHHHHcccChhhCC
Confidence                 56789999999999999999999999999888777777766543211  12223445899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCCCcc
Q 013016          395 GSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~~~~  415 (451)
                      |    +.++++||||+++.+.
T Consensus       269 s----~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          269 S----AAQLLEHPFVSSITSN  285 (302)
T ss_dssp             C----HHHHTTSTTTTTCCCC
T ss_pred             C----HHHHhcChHHhhhccc
Confidence            9    9999999999997664

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.1e-47  Score=369.81  Aligned_cols=274  Identities=26%  Similarity=0.346  Sum_probs=197.6

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.+.||+|+||.||+|.+..+++         .||||++.....  ......+.+|+.++++++||||+++++
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~   80 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKE---------KVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYT   80 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----C---------EEEEECCC------------------CCCCCCCTTBCCEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCc---------EEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEE
Confidence            334789999999999999999999876654         499999976532  233456777999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHK------QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ++...+..++||||++|++|.+++..      .....+++..++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus        81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  160 (303)
T 2vwi_A           81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV  160 (303)
T ss_dssp             EEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred             EEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCE
Confidence            99999999999999999999998874      134569999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++..........                                                  .........||+
T Consensus       161 kl~dfg~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~  190 (303)
T 2vwi_A          161 QIADFGVSAFLATGGDIT--------------------------------------------------RNKVRKTFVGTP  190 (303)
T ss_dssp             EECCCHHHHHCC-----------------------------------------------------------------CCC
T ss_pred             EEEeccchheeccCCCcc--------------------------------------------------chhhhcccCCCc
Confidence            999999975322110000                                                  001112347999


Q ss_pred             CccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-CCC----CCCCcChHHHHHHHHH
Q 013016          311 EYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-PTQ----SPSSMSEYHARDLISG  384 (451)
Q Consensus       311 ~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-~~~----~~~~~~~~~~~~ll~~  384 (451)
                      .|+|||++.+ ..++.++|||||||++|+|++|+.||................... ...    ......+.++.+||.+
T Consensus       191 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  270 (303)
T 2vwi_A          191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL  270 (303)
T ss_dssp             TTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHH
T ss_pred             cccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHH
Confidence            9999999876 568999999999999999999999999877666555554433221 110    1112234589999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ||+.||.+||+    +.++++||||++....
T Consensus       271 ~l~~dp~~Rps----~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          271 CLQKDPEKRPT----AAELLRHKFFQKAKNK  297 (303)
T ss_dssp             HCCSSGGGSCC----HHHHHTSTTC------
T ss_pred             HccCChhhCcC----HHHHhhChhhhcCCCC
Confidence            99999999999    9999999999986554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1e-47  Score=374.27  Aligned_cols=262  Identities=29%  Similarity=0.487  Sum_probs=207.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----HHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----KKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++......     .......+.+|+.++++++||||+++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   80 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCK---------KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI   80 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECC---------------CHHHHHHHHHHCCCTTBCCE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCc---------EEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceE
Confidence            679999999999999999999887665         4999999765321     12223456789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC---EE
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IM  231 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~---~k  231 (451)
                      ++++..++ .|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +|
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~k  157 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK  157 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEE
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEE
Confidence            99987665 89999999999999988754  56999999999999999999999999999999999999987664   99


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++......                                                        .......||+.
T Consensus       158 l~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~gt~~  181 (322)
T 2ycf_A          158 ITDFGHSKILGET--------------------------------------------------------SLMRTLCGTPT  181 (322)
T ss_dssp             ECCCTTCEECCCC--------------------------------------------------------HHHHHHHSCCT
T ss_pred             EccCccceecccc--------------------------------------------------------cccccccCCcC
Confidence            9999998432100                                                        00112468999


Q ss_pred             ccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          312 YVSPEVAS---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       312 y~aPE~~~---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |+|||++.   +..++.++|||||||++|+|++|..||...... .....+..+...+....+.. .+..+.+||.+||+
T Consensus       182 y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~  260 (322)
T 2ycf_A          182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE-VSEKALDLVKKLLV  260 (322)
T ss_dssp             TCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTT-SCHHHHHHHHHHSC
T ss_pred             ccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhh-cCHHHHHHHHHHcc
Confidence            99999974   456899999999999999999999999875443 33344444443332211122 23489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .||.+||+    +.++|+||||++.++
T Consensus       261 ~dP~~Rps----~~~~l~h~~~~~~~~  283 (322)
T 2ycf_A          261 VDPKARFT----TEEALRHPWLQDEDM  283 (322)
T ss_dssp             SSTTTSCC----HHHHHTSGGGCCHHH
T ss_pred             cCHhhCCC----HHHHhhCcCcCCHHH
Confidence            99999999    999999999998655

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=7.7e-47  Score=372.41  Aligned_cols=275  Identities=25%  Similarity=0.311  Sum_probs=213.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||||++....  .......+.+|+.+++.++||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   79 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGE---------IVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQR   79 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCc---------EEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeec
Confidence            789999999999999999999886655         49999996432  2334456678999999999999999999886


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     ...|+||||+ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        80 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~D  155 (353)
T 2b9h_A           80 PDSFENFNEVYIIQELM-QTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCD  155 (353)
T ss_dssp             CSCSTTCCCEEEEECCC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             ccccCccceEEEEEecc-CccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEe
Confidence            54     6899999999 4799998876   3599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++............                                             ...........+||+.|+|
T Consensus       156 fg~a~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~gt~~y~a  190 (353)
T 2b9h_A          156 FGLARIIDESAADNSE---------------------------------------------PTGQQSGMVEFVATRWYRA  190 (353)
T ss_dssp             CTTCEECC-------------------------------------------------------------CCCCCCGGGCC
T ss_pred             cccccccccccccccC---------------------------------------------ccccccchhhccccccccC
Confidence            9998643211110000                                             0000011223579999999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC---------------------CCCC--
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP---------------------TQSP--  370 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~---------------------~~~~--  370 (451)
                      ||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+........                     ....  
T Consensus       191 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (353)
T 2b9h_A          191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP  270 (353)
T ss_dssp             HHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCC
T ss_pred             CeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcc
Confidence            998765 6789999999999999999999999998876665554432110000                     0000  


Q ss_pred             ----CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccccc
Q 013016          371 ----SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIR  418 (451)
Q Consensus       371 ----~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~  418 (451)
                          ....+.++.+||.+||+.||.+|||    +.|+|+||||+........
T Consensus       271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~~~~~  318 (353)
T 2b9h_A          271 LEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKEALEHPYLQTYHDPNDE  318 (353)
T ss_dssp             HHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTTCCTTSS
T ss_pred             hhhhcccCCHHHHHHHHHhcCcCcccCCC----HHHHhcCccccccCCcccc
Confidence                0123448899999999999999999    9999999999997765543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=4.9e-47  Score=376.98  Aligned_cols=260  Identities=27%  Similarity=0.374  Sum_probs=211.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++..... .......+.+|+.+++.++||||+++++++.
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  111 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGE---------KVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFT  111 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCC---------EEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhhee
Confidence            689999999999999999999887665         499999975432 2334566778999999999999999999998


Q ss_pred             eCCeE------EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASNFS------CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~~~------~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..+..      |+||||+. ++|.+++.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~  186 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL  186 (371)
T ss_dssp             SCSSSTTCCCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             ccCCcccceeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEE
Confidence            77654      99999994 78887763    349999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          .....+||+.|+
T Consensus       187 Dfg~a~~~~~----------------------------------------------------------~~~~~~~t~~y~  208 (371)
T 4exu_A          187 DFGLARHADA----------------------------------------------------------EMTGYVVTRWYR  208 (371)
T ss_dssp             STTCC------------------------------------------------------------------CTTCCCTTS
T ss_pred             ecCccccccc----------------------------------------------------------CcCCcccCcccc
Confidence            9999842210                                                          011247899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC--------------------CCC--
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT--------------------QSP--  370 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~--------------------~~~--  370 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||.+....+.+..+.......+.                    ...  
T Consensus       209 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (371)
T 4exu_A          209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD  288 (371)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCC
T ss_pred             CHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchh
Confidence            9999987 67899999999999999999999999988877766666442111100                    000  


Q ss_pred             ----CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          371 ----SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       371 ----~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                          ....+.++.+||.+||++||.+|||    +.|+|+||||+.+..+.
T Consensus       289 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          289 FTQLFPRASPQAADLLEKMLELDVDKRLT----AAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             HHHHSTTSCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGGGTTTCCGG
T ss_pred             HHHhccccChHHHHHHHHHCCCChhhcCC----HHHHhcCcccccCCCcc
Confidence                0112448999999999999999999    99999999999865543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=7.6e-47  Score=366.24  Aligned_cols=257  Identities=24%  Similarity=0.339  Sum_probs=206.6

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ..+..++|++.++||+|+||+||+|.+.+.           .||||++..... .......+.+|+.++++++||||+++
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~-----------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~   99 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-----------DVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLF   99 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEETTE-----------EEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEECCC-----------cEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            344558899999999999999999987543           399999975532 23345667889999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccCCCEE
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~k  231 (451)
                      ++++...+..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||++|  |+||||||+|||++.++.+|
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~k  179 (309)
T 3p86_A          100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVK  179 (309)
T ss_dssp             EEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEE
T ss_pred             EEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEE
Confidence            9999999999999999999999999876431 23899999999999999999999999  99999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++......                                                       ........||+.
T Consensus       180 L~Dfg~a~~~~~~-------------------------------------------------------~~~~~~~~gt~~  204 (309)
T 3p86_A          180 VCDFGLSRLKAST-------------------------------------------------------FLSSKSAAGTPE  204 (309)
T ss_dssp             ECCCC------------------------------------------------------------------------CCT
T ss_pred             ECCCCCCcccccc-------------------------------------------------------ccccccCCCCcc
Confidence            9999998421100                                                       001113479999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |+|||++.+..++.++|||||||++|+|++|+.||......+....+........  . +...+.++.+||.+||+.||.
T Consensus       205 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l~~li~~~l~~dP~  281 (309)
T 3p86_A          205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--I-PRNLNPQVAAIIEGCWTNEPW  281 (309)
T ss_dssp             TSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--C-CTTSCHHHHHHHHHHTCSSGG
T ss_pred             ccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--C-CccCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999999999999999999888777766643322211  1 122344899999999999999


Q ss_pred             CcCCCCCChHHHHc
Q 013016          392 NRLGSKRGAADVKT  405 (451)
Q Consensus       392 ~Rpt~~~~~~ell~  405 (451)
                      +|||    +.+|++
T Consensus       282 ~Rps----~~~ll~  291 (309)
T 3p86_A          282 KRPS----FATIMD  291 (309)
T ss_dssp             GSCC----HHHHHH
T ss_pred             hCcC----HHHHHH
Confidence            9999    999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=4.3e-47  Score=373.77  Aligned_cols=263  Identities=25%  Similarity=0.387  Sum_probs=212.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC------ccc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF------LPT  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------Iv~  153 (451)
                      ++|++.+.||+|+||+||+|.++...+        ..||||++....    .....+..|+.+++.+.|++      |+.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--------~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~   86 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGK--------SQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVL   86 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTT--------EEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCC
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCc--------eEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEE
Confidence            789999999999999999999876542        159999997542    23345667888888886655      899


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---------
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---------  224 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---------  224 (451)
                      +++++...++.|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+         
T Consensus        87 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~  165 (355)
T 2eu9_A           87 MSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY  165 (355)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             eeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccc
Confidence            999999999999999999 7778777777655679999999999999999999999999999999999999         


Q ss_pred             ----------ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccc
Q 013016          225 ----------RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF  294 (451)
Q Consensus       225 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (451)
                                +.++.+||+|||++.....                                                   
T Consensus       166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---------------------------------------------------  194 (355)
T 2eu9_A          166 NEHKSCEEKSVKNTSIRVADFGSATFDHE---------------------------------------------------  194 (355)
T ss_dssp             CCC-CCCEEEESCCCEEECCCTTCEETTS---------------------------------------------------
T ss_pred             cccccccccccCCCcEEEeecCccccccc---------------------------------------------------
Confidence                      5678999999999842110                                                   


Q ss_pred             ccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-------
Q 013016          295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-------  367 (451)
Q Consensus       295 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------  367 (451)
                             ......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+.......+.       
T Consensus       195 -------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  267 (355)
T 2eu9_A          195 -------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTR  267 (355)
T ss_dssp             -------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCS
T ss_pred             -------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhcc
Confidence                   011247899999999999999999999999999999999999999987776655444332111111       


Q ss_pred             --------------------------------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          368 --------------------------------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       368 --------------------------------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                                                      .......+.++.+||.+||+.||++|||    +.|+|+||||+++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~  343 (355)
T 2eu9_A          268 KQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT----LAEALLHPFFAGLTPE  343 (355)
T ss_dssp             CGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGCCHH
T ss_pred             chhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcCCChh
Confidence                                            0011112347889999999999999999    9999999999998765


Q ss_pred             cc
Q 013016          416 LI  417 (451)
Q Consensus       416 ~~  417 (451)
                      ..
T Consensus       344 ~~  345 (355)
T 2eu9_A          344 ER  345 (355)
T ss_dssp             HH
T ss_pred             hc
Confidence            43

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.9e-47  Score=368.50  Aligned_cols=265  Identities=27%  Similarity=0.376  Sum_probs=212.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEec-cccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCcccee
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLN-NKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLY  155 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~  155 (451)
                      ++|.+.+.||+|+||.||+|.+. .+++         .||||++...... ......+.+|+.+++.+   .||||++++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~---------~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~   80 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGR---------FVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLF   80 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTE---------EEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCE---------EEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeee
Confidence            78999999999999999999985 3333         5999999754221 11122344566666655   899999999


Q ss_pred             EEEE-----eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          156 AEFE-----ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       156 ~~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      +++.     .....++||||+. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        81 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~  159 (326)
T 1blx_A           81 DVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI  159 (326)
T ss_dssp             EEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             eeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCE
Confidence            9987     5678999999995 699999988766679999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                        .......||+
T Consensus       160 kl~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~~~  183 (326)
T 1blx_A          160 KLADFGLARIYSFQ--------------------------------------------------------MALTSVVVTL  183 (326)
T ss_dssp             EECSCCSCCCCCGG--------------------------------------------------------GGGCCCCCCC
T ss_pred             EEecCcccccccCC--------------------------------------------------------CCcccccccc
Confidence            99999997422100                                                        0111347899


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC-----CCC-----------------C
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT-----FPT-----------------Q  368 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----~~~-----------------~  368 (451)
                      .|+|||++.+..++.++|||||||++|+|++|+.||........+..+......     ++.                 .
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (326)
T 1blx_A          184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIE  263 (326)
T ss_dssp             TTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGG
T ss_pred             ceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhh
Confidence            999999999989999999999999999999999999998887777666542110     000                 0


Q ss_pred             CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       369 ~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ......+..+.+||.+||+.||.+||+    +.|+++||||++++..
T Consensus       264 ~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          264 KFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYFQDLERC  306 (326)
T ss_dssp             GTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTCCCC
T ss_pred             hccccCCHHHHHHHHHHcCCCcccCCC----HHHHhcCccccccchh
Confidence            001223448899999999999999999    9999999999997654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4.7e-47  Score=378.52  Aligned_cols=258  Identities=27%  Similarity=0.416  Sum_probs=209.7

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CC-----Ccc
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HP-----FLP  152 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----nIv  152 (451)
                      .++|.+.++||+|+||+||+|.+..+++         .||||++....    .....+..|+.+++.+. |+     +|+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv  119 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQE---------WVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIV  119 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTE---------EEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBC
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCc---------EEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEE
Confidence            3789999999999999999999887655         49999997542    23345566888888774 44     499


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeccCCCCcEEEc--cCC
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH--MLGIIYRDLKPENVLVR--SDG  228 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--~~givH~Dlkp~NIll~--~~~  228 (451)
                      ++++++...++.||||||+ +++|.+++.......+++..++.++.||+.||.|||  ++||+||||||+|||++  .++
T Consensus       120 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~  198 (382)
T 2vx3_A          120 HLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS  198 (382)
T ss_dssp             CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSC
T ss_pred             EeeeeeccCCceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCC
Confidence            9999999999999999999 569999998876667999999999999999999999  57999999999999995  467


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++.....                                                          .....+|
T Consensus       199 ~~kL~DFG~a~~~~~----------------------------------------------------------~~~~~~~  220 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQ----------------------------------------------------------RIYQYIQ  220 (382)
T ss_dssp             CEEECCCTTCEETTC----------------------------------------------------------CCCSSCS
T ss_pred             cEEEEeccCceeccc----------------------------------------------------------ccccccC
Confidence            899999999853210                                                          0112478


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC------------------C--
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT------------------Q--  368 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~------------------~--  368 (451)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.......+.                  .  
T Consensus       221 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (382)
T 2vx3_A          221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTW  300 (382)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCE
T ss_pred             CccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccc
Confidence            99999999999999999999999999999999999999998887777666542111100                  0  


Q ss_pred             ---------------CCCC------------------------cChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          369 ---------------SPSS------------------------MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       369 ---------------~~~~------------------------~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                                     ....                        ....++++||.+||++||++|||    +.|+|+||||
T Consensus       301 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpt----a~e~L~hp~f  376 (382)
T 2vx3_A          301 NLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQ----PYYALQHSFF  376 (382)
T ss_dssp             EECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGG
T ss_pred             ccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCC----HHHHhcCccc
Confidence                           0000                        00136899999999999999999    9999999999


Q ss_pred             CCC
Q 013016          410 KGL  412 (451)
Q Consensus       410 ~~~  412 (451)
                      ++.
T Consensus       377 ~~~  379 (382)
T 2vx3_A          377 KKT  379 (382)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            984

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.2e-46  Score=363.32  Aligned_cols=255  Identities=25%  Similarity=0.387  Sum_probs=217.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.+.+.||+|+||.||+|.+..+++         .||||++.....  ......+.+|+.+++.++||||+++++++.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   90 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQK---------VVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYL   90 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCc---------EEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEe
Confidence            569999999999999999999876655         499999975532  233566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||++|++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A           91 KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAG  167 (303)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccce
Confidence            99999999999999999999865   459999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       168 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  192 (303)
T 3a7i_A          168 QLTDT-------------------------------------------------------QIKRNTFVGTPFWMAPEVIK  192 (303)
T ss_dssp             ECBTT-------------------------------------------------------BCCBCCCCSCGGGCCHHHHT
T ss_pred             ecCcc-------------------------------------------------------ccccCccCCCcCccCHHHHh
Confidence            32210                                                       00112347899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+........    ....+..+.+||.+||+.||.+|||    
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps----  264 (303)
T 3a7i_A          193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEFVEACLNKEPSFRPT----  264 (303)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC----CSSCCHHHHHHHHHHCCSSGGGSCC----
T ss_pred             cCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCC----ccccCHHHHHHHHHHcCCChhhCcC----
Confidence            98999999999999999999999999998877777666655433211    1223448999999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      +.++++||||..
T Consensus       265 ~~~ll~~~~~~~  276 (303)
T 3a7i_A          265 AKELLKHKFILR  276 (303)
T ss_dssp             HHHHTTCHHHHH
T ss_pred             HHHHhhChhhhc
Confidence            999999999976

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=6.4e-47  Score=361.39  Aligned_cols=253  Identities=18%  Similarity=0.268  Sum_probs=204.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||+||+|.+..+++         .||||++...... ......+.+|+..+..+ +||||+++++++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~   80 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGC---------IYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAW   80 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCc---------eEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence            679999999999999999999886655         4999999754222 22345666789999998 899999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---------
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---------  227 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---------  227 (451)
                      .+.+..|+||||++|++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           81 AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccc
Confidence            99999999999999999999987642  2558999999999999999999999999999999999999844         


Q ss_pred             ----------CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccc
Q 013016          228 ----------GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAE  297 (451)
Q Consensus       228 ----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (451)
                                ..+||+|||.+.....                                                      
T Consensus       161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------------------------------------------  186 (289)
T 1x8b_A          161 GDEDDWASNKVMFKIGDLGHVTRISS------------------------------------------------------  186 (289)
T ss_dssp             ---------CCCEEECCCTTCEETTC------------------------------------------------------
T ss_pred             cccccccCCceEEEEcccccccccCC------------------------------------------------------
Confidence                      4799999999743211                                                      


Q ss_pred             cccccccccccCCCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChH
Q 013016          298 PVAARSCSFVGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY  376 (451)
Q Consensus       298 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  376 (451)
                           .....||+.|+|||++.+. .++.++|||||||++|+|++|..++...   .....+..+.....    +...+.
T Consensus       187 -----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~  254 (289)
T 1x8b_A          187 -----PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQWHEIRQGRLPRI----PQVLSQ  254 (289)
T ss_dssp             -----SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHHHHHHTTCCCCC----SSCCCH
T ss_pred             -----ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---hHHHHHHcCCCCCC----CcccCH
Confidence                 0112589999999999876 4678999999999999999999887543   23344444433211    122344


Q ss_pred             HHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       377 ~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      ++.+||.+||+.||++|||    +.|+++||||++.
T Consensus       255 ~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~  286 (289)
T 1x8b_A          255 EFTELLKVMIHPDPERRPS----AMALVKHSVLLSA  286 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCC----HHHHHTCTTC---
T ss_pred             HHHHHHHHHhCCCcccCCC----HHHHhhChHhhhh
Confidence            8999999999999999999    9999999999973

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.7e-47  Score=381.20  Aligned_cols=256  Identities=25%  Similarity=0.351  Sum_probs=203.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC--------CCCc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD--------HPFL  151 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~nI  151 (451)
                      ++|.+.++||+|+||+||+|++..+++         .||||++....    .....+.+|+.+++.+.        |+||
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i  103 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKK---------FVAMKVVKSAE----HYTETALDEIRLLKSVRNSDPNDPNREMV  103 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSCH----HHHHHHHHHHHHHHHHHHSCTTCGGGGGB
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCe---------EEEEEEEecCC----cchHHHHHHHHHHHHHhhcCCCCCCccee
Confidence            679999999999999999999877655         49999997542    23455677899988885        7889


Q ss_pred             cceeEEEE----eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEcc
Q 013016          152 PTLYAEFE----ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRS  226 (451)
Q Consensus       152 v~l~~~~~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~  226 (451)
                      +++++++.    ...++|+||||+ +++|.+++.......+++..++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus       104 v~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~  182 (397)
T 1wak_A          104 VQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV  182 (397)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECC
T ss_pred             eeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEec
Confidence            99999997    556899999999 77777777666556799999999999999999999998 9999999999999997


Q ss_pred             CC-------------------------------------------------CEEEeccCcccccCCCCCCCCCCCCCCCC
Q 013016          227 DG-------------------------------------------------HIMLSDFDLSLCSNAIPAVESPASSPEAA  257 (451)
Q Consensus       227 ~~-------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~  257 (451)
                      ++                                                 .+||+|||++.....              
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~--------------  248 (397)
T 1wak_A          183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--------------  248 (397)
T ss_dssp             CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB--------------
T ss_pred             cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc--------------
Confidence            75                                                 799999999843210              


Q ss_pred             CCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHH
Q 013016          258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIY  337 (451)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~  337 (451)
                                                                  .....+||+.|+|||++.+..++.++|||||||+||
T Consensus       249 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  284 (397)
T 1wak_A          249 --------------------------------------------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAF  284 (397)
T ss_dssp             --------------------------------------------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred             --------------------------------------------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHH
Confidence                                                        011237899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCh------HHHHHHHhcCCCCCC------------------------CC-------------CCCCcC
Q 013016          338 EMIYGRTPFAAPSN------ETTLRNIVKKPLTFP------------------------TQ-------------SPSSMS  374 (451)
Q Consensus       338 elltg~~pf~~~~~------~~~~~~i~~~~~~~~------------------------~~-------------~~~~~~  374 (451)
                      +|++|+.||.....      ...+..+.......+                        ..             ..+...
T Consensus       285 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (397)
T 1wak_A          285 ELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEE  364 (397)
T ss_dssp             HHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHH
T ss_pred             HHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhh
Confidence            99999999986442      222222221100000                        00             001112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +..+.+||.+||+.||++|||    +.|||+||||++
T Consensus       365 ~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~  397 (397)
T 1wak_A          365 AAGFTDFLLPMLELIPEKRAT----AAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHGGGGCSSGGGSCC----HHHHHTSGGGGC
T ss_pred             HHHHHHHHHHHhccChhhcCC----HHHHhhCccccC
Confidence            336889999999999999999    999999999974

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.3e-47  Score=379.04  Aligned_cols=273  Identities=25%  Similarity=0.364  Sum_probs=202.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+++         .||||++....    ........++..+..++||||+++++++.
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~----~~~~~~~~~~~~l~~l~h~niv~~~~~~~   89 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGM---------SVAIKKVIQDP----RFRNRELQIMQDLAVLHHPNIVQLQSYFY   89 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCC---------EEEEEEEECCT----TCCCHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEEecCc----cccHHHHHHHHHHHhcCCCCcccHHHhhh
Confidence            789999999999999999999887655         49999986432    22234455778888899999999999997


Q ss_pred             eCC-------eEEEEEeeccCCchhhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeccCCCCcEEEcc-C
Q 013016          160 ASN-------FSCIVMEFCSGGDLHSLRHK--QPHKRFSLTSARFYAAEVLVALEYLH--MLGIIYRDLKPENVLVRS-D  227 (451)
Q Consensus       160 ~~~-------~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH--~~givH~Dlkp~NIll~~-~  227 (451)
                      ..+       ++++||||+.+ +|...+..  .....+++..++.++.||+.||.|||  ++||+||||||+|||++. +
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~  168 (360)
T 3e3p_A           90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD  168 (360)
T ss_dssp             EECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTT
T ss_pred             ccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCC
Confidence            643       38999999965 55444332  23456899999999999999999999  999999999999999996 8


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +.+||+|||++......                                                        .......
T Consensus       169 ~~~kl~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~  192 (360)
T 3e3p_A          169 GTLKLCDFGSAKKLSPS--------------------------------------------------------EPNVAYI  192 (360)
T ss_dssp             TEEEECCCTTCBCCCTT--------------------------------------------------------SCCCSTT
T ss_pred             CcEEEeeCCCceecCCC--------------------------------------------------------CCccccc
Confidence            99999999998532211                                                        0111347


Q ss_pred             cCCCccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC-------------------
Q 013016          308 GTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-------------------  367 (451)
Q Consensus       308 gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------------------  367 (451)
                      ||+.|+|||++.+.. ++.++|||||||++|+|++|+.||........+..+.......+.                   
T Consensus       193 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T 3e3p_A          193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSK  272 (360)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCC
T ss_pred             CCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccc
Confidence            899999999997755 899999999999999999999999998887777666542111000                   


Q ss_pred             --------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCCC
Q 013016          368 --------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP  426 (451)
Q Consensus       368 --------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~p  426 (451)
                              .......+.++.+||.+||++||.+|||    +.|+|+||||+++..........+.+|
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~~~~~~~~~~  335 (360)
T 3e3p_A          273 GIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK----PYEALCHPYFDELHDPATKLPNNKDLP  335 (360)
T ss_dssp             CCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCC----HHHHTTSGGGGGGGCTTCCCTTSCCCC
T ss_pred             cCCcccccchhhccccHHHHHHHHHHhccCccccCC----HHHHhcCccccccCCccccCCCCCCCC
Confidence                    0001113458999999999999999999    999999999999766554433333333

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.9e-47  Score=379.27  Aligned_cols=258  Identities=25%  Similarity=0.433  Sum_probs=207.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||++....       ....+|+.+++.++||||+++++++.
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~---------~vAiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~   70 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGK---------RFALKKVLQDP-------RYKNRELDIMKVLDHVNIIKLVDYFY   70 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCC---------EEEEEEEECCT-------TSCCHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCC---------EEEEEEEecCc-------chHHHHHHHHHHcCCCCccchhheee
Confidence            789999999999999999999887665         49999986432       11235999999999999999999984


Q ss_pred             e--------------------------------------CCeEEEEEeeccCCchhhhhhh--CCCCCCCHHHHHHHHHH
Q 013016          160 A--------------------------------------SNFSCIVMEFCSGGDLHSLRHK--QPHKRFSLTSARFYAAE  199 (451)
Q Consensus       160 ~--------------------------------------~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~q  199 (451)
                      .                                      ..++++||||++ ++|.+++..  .....+++..++.++.|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~q  149 (383)
T 3eb0_A           71 TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQ  149 (383)
T ss_dssp             EC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             ecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence            3                                      345899999996 688777653  23466999999999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEc-cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhcc
Q 013016          200 VLVALEYLHMLGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNR  278 (451)
Q Consensus       200 il~aL~~LH~~givH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (451)
                      |+.||+|||++||+||||||+|||++ .++.+||+|||++......                                  
T Consensus       150 i~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------------  195 (383)
T 3eb0_A          150 LFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------------  195 (383)
T ss_dssp             HHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------------
T ss_pred             HHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------------
Confidence            99999999999999999999999998 6889999999998532211                                  


Q ss_pred             ccCCccccccCCCcccccccccccccccccCCCccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013016          279 FFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN  357 (451)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~  357 (451)
                                            .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+....+.+..
T Consensus       196 ----------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  253 (383)
T 3eb0_A          196 ----------------------EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVR  253 (383)
T ss_dssp             ----------------------SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ----------------------CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                                  0111347899999999998754 89999999999999999999999999888877776


Q ss_pred             HhcCCC-----------------CCCCCC-------CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          358 IVKKPL-----------------TFPTQS-------PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       358 i~~~~~-----------------~~~~~~-------~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      ++....                 .++...       .+...+.++.+||.+||++||.+|||    +.|+|+||||+++.
T Consensus       254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          254 IIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN----PYEAMAHPFFDHLR  329 (383)
T ss_dssp             HHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGHHHH
T ss_pred             HHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCHHHHHHH
Confidence            654111                 111110       01123447999999999999999999    99999999999854


Q ss_pred             c
Q 013016          414 F  414 (451)
Q Consensus       414 ~  414 (451)
                      .
T Consensus       330 ~  330 (383)
T 3eb0_A          330 N  330 (383)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.1e-46  Score=360.91  Aligned_cols=261  Identities=23%  Similarity=0.299  Sum_probs=199.8

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||+||+|.+..+++         .||||++...... ......+..+...++.++||||+++++
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~   73 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQ---------IMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYG   73 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCe---------EEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence            344789999999999999999999876665         4999999765322 222333444555577889999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEe
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHK--QPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ++..++..|+||||++ |+|.+++..  .....+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+
T Consensus        74 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~  152 (290)
T 3fme_A           74 ALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC  152 (290)
T ss_dssp             EEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBC
T ss_pred             eeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEe
Confidence            9999999999999995 688877654  2345699999999999999999999998 99999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                        .......||+.|+
T Consensus       153 Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~  176 (290)
T 3fme_A          153 DFGISGYLVDD--------------------------------------------------------VAKDIDAGCKPYM  176 (290)
T ss_dssp             CC-----------------------------------------------------------------------CCCCCCS
T ss_pred             ecCCccccccc--------------------------------------------------------ccccccCCCcccc
Confidence            99998432110                                                        0011236899999


Q ss_pred             Ccccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          314 SPEVA----SGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       314 aPE~~----~~~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      |||++    .+..++.++|||||||++|+|++|+.||.. ......+...........   .....+.++.+||.+||+.
T Consensus       177 aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~  253 (290)
T 3fme_A          177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFVDFTSQCLKK  253 (290)
T ss_dssp             CHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC---CTTTSCHHHHHHHHHHTCS
T ss_pred             ChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc---ccccCCHHHHHHHHHHhhc
Confidence            99996    456689999999999999999999999986 344444454444432211   1122344899999999999


Q ss_pred             CcCCcCCCCCChHHHHcCCCcCC
Q 013016          389 DPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||++|||    +.|+++||||+.
T Consensus       254 ~p~~Rpt----~~e~l~hp~f~~  272 (290)
T 3fme_A          254 NSKERPT----YPELMQHPFFTL  272 (290)
T ss_dssp             SGGGSCC----HHHHTTSHHHHH
T ss_pred             ChhhCcC----HHHHHhCccccc
Confidence            9999999    999999999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-47  Score=379.57  Aligned_cols=270  Identities=18%  Similarity=0.255  Sum_probs=217.4

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.++||+|+||+||+|.+.....    ...+..||||++....  .......+.+|+.++++++||||+++++
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~  141 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPN----DPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIG  141 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC---------CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCC----CCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            344789999999999999999999754321    1223359999996432  2233446777999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC---
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQP-----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---  228 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~---  228 (451)
                      ++...+..|+||||++||+|.+++....     ...+++..++.++.||+.||+|||++||+||||||+|||++.+|   
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  221 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  221 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCc
Confidence            9999999999999999999999987643     24589999999999999999999999999999999999999655   


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++.....                                                     ...........|
T Consensus       222 ~~kL~DFG~a~~~~~-----------------------------------------------------~~~~~~~~~~~~  248 (367)
T 3l9p_A          222 VAKIGDFGMARDIYR-----------------------------------------------------AGYYRKGGCAML  248 (367)
T ss_dssp             CEEECCCHHHHHHHH-----------------------------------------------------HSSCTTCCGGGS
T ss_pred             eEEECCCcccccccc-----------------------------------------------------ccccccCCCcCC
Confidence            599999999842210                                                     000111123468


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |+.|+|||++.+..++.++|||||||++|||++ |..||......+.+..+..+......    ...+..+.+||.+||+
T Consensus       249 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~  324 (367)
T 3l9p_A          249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP----KNCPGPVYRIMTQCWQ  324 (367)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTC
T ss_pred             cccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcC
Confidence            899999999999999999999999999999998 99999999888888888776532221    2233489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      .||.+||+    +.+|++|.|+...+
T Consensus       325 ~dP~~Rps----~~eil~~l~~~~~~  346 (367)
T 3l9p_A          325 HQPEDRPN----FAIILERIEYCTQD  346 (367)
T ss_dssp             SSGGGSCC----HHHHHHHHHHHHHC
T ss_pred             CCHhHCcC----HHHHHHHHHHHhhC
Confidence            99999999    99999988776533

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=363.75  Aligned_cols=260  Identities=25%  Similarity=0.404  Sum_probs=213.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++....     ....+.+|+.+++.++||||+++++++.
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~   94 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKETGQ---------IVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYF   94 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETTTCC---------EEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hhhhhheeeccCCCeEEEEEEECCCCC---------EEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEE
Confidence            679999999999999999999887655         49999997542     2355677999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||+.+++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  173 (314)
T 3com_A           95 KNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG  173 (314)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eCCEEEEEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence            999999999999999999998743 3569999999999999999999999999999999999999999999999999974


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|++.|+|||++.
T Consensus       174 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~~~  198 (314)
T 3com_A          174 QLTDT-------------------------------------------------------MAKRNTVIGTPFWMAPEVIQ  198 (314)
T ss_dssp             ECBTT-------------------------------------------------------BSCBCCCCSCGGGCCHHHHS
T ss_pred             hhhhh-------------------------------------------------------ccccCccCCCCCccChhhcC
Confidence            32110                                                       00112347899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..++.++|||||||++|+|++|+.||...........+.......  ...+...+..+.+||.+||+.||.+|||    
T Consensus       199 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rpt----  272 (314)
T 3com_A          199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT--FRKPELWSDNFTDFVKQCLVKSPEQRAT----  272 (314)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--CSSGGGSCHHHHHHHHHHTCSCTTTSCC----
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcc--cCCcccCCHHHHHHHHHHccCChhhCcC----
Confidence            9889999999999999999999999999877766655554443211  1112234458999999999999999999    


Q ss_pred             hHHHHcCCCcCCCCcc
Q 013016          400 AADVKTHPFFKGLNFA  415 (451)
Q Consensus       400 ~~ell~hp~~~~~~~~  415 (451)
                      +.++++||||++....
T Consensus       273 ~~~ll~~~~~~~~~~~  288 (314)
T 3com_A          273 ATQLLQHPFVRSAKGV  288 (314)
T ss_dssp             HHHHTTSHHHHTCCCG
T ss_pred             HHHHHhCHHHhcCCcc
Confidence            9999999999996643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=4e-47  Score=370.00  Aligned_cols=277  Identities=20%  Similarity=0.289  Sum_probs=199.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||+||+|.+....+.      ...||||++...... ......+.+|+.++++++||||+++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGS------FVKVAVKMLKADIIA-SSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCc------ceeEEEEEecccccC-HHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            37899999999999999999998765421      124999999765332 33456788899999999999999999999


Q ss_pred             EeCCeE------EEEEeeccCCchhhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC
Q 013016          159 EASNFS------CIVMEFCSGGDLHSLRHKQP----HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG  228 (451)
Q Consensus       159 ~~~~~~------~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~  228 (451)
                      ...+..      ++||||+.+++|.+++....    ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            877655      99999999999999886432    22589999999999999999999999999999999999999999


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++.......                                                     .........|
T Consensus       175 ~~kl~Dfg~a~~~~~~~-----------------------------------------------------~~~~~~~~~~  201 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGD-----------------------------------------------------YYRQGCASKL  201 (323)
T ss_dssp             CEEECCCCC----------------------------------------------------------------------C
T ss_pred             CEEEeeccccccccccc-----------------------------------------------------cccccccccC
Confidence            99999999985321110                                                     0001112356


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      ++.|+|||++.+..++.++|||||||++|+|++ |+.||......+....+..+......    ...+.++.+||.+||+
T Consensus       202 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~  277 (323)
T 3qup_A          202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP----PECMEEVYDLMYQCWS  277 (323)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTC
T ss_pred             cccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCC----CccCHHHHHHHHHHcc
Confidence            788999999999999999999999999999999 99999998888888877766432211    1233489999999999


Q ss_pred             cCcCCcCCC---CCChHHHHcCCCcCCCCcccccc
Q 013016          388 KDPCNRLGS---KRGAADVKTHPFFKGLNFALIRS  419 (451)
Q Consensus       388 ~dP~~Rpt~---~~~~~ell~hp~~~~~~~~~~~~  419 (451)
                      .||.+|||+   ...+++++.|+|+....+..+..
T Consensus       278 ~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~  312 (323)
T 3qup_A          278 ADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYI  312 (323)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHC-------------
T ss_pred             CChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCC
Confidence            999999994   22256778999999966654433

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=367.26  Aligned_cols=261  Identities=21%  Similarity=0.291  Sum_probs=213.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.+.||+|+||+||+|.+..+++      .+..||||++....  .......+.+|+.+++.++||||++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~------~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~  116 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLE  116 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTS------CCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCC------CCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            3455789999999999999999999875432      12359999997542  233446678899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+..|+||||++|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  195 (325)
T 3kul_A          117 GVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF  195 (325)
T ss_dssp             EEECGGGCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEeCCccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCC
Confidence            9999999999999999999999998764 346999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    .........||+.|+||
T Consensus       196 g~a~~~~~~~~----------------------------------------------------~~~~~~~~~~t~~y~aP  223 (325)
T 3kul_A          196 GLSRVLEDDPD----------------------------------------------------AAYTTTGGKIPIRWTAP  223 (325)
T ss_dssp             SSCEECC--------------------------------------------------------CCEECC---CCGGGSCH
T ss_pred             CcccccccCcc----------------------------------------------------ceeeccCCCCcccccCH
Confidence            99854321100                                                    00011122567789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...+..+.+||.+||..||.+||
T Consensus       224 E~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rp  299 (325)
T 3kul_A          224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA----PMGCPHALHQLMLDCWHKDRAQRP  299 (325)
T ss_dssp             HHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC----CCCcCHHHHHHHHHHccCChhhCc
Confidence            99998889999999999999999999 9999999888888888776632211    122344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    +.+|++
T Consensus       300 s----~~eil~  306 (325)
T 3kul_A          300 R----FSQIVS  306 (325)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    888875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4.4e-47  Score=363.61  Aligned_cols=261  Identities=30%  Similarity=0.492  Sum_probs=219.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.++.+++         .||||++...... ......+.+|+.++++++||||+++++++.
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~---------~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   91 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQ---------EYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE   91 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCc---------EEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEe
Confidence            679999999999999999999876655         4999999765322 233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~Dfg  236 (451)
                      ..+..++||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.+   +.+||+|||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           92 DSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             CCCeEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            999999999999999999888764  459999999999999999999999999999999999999754   479999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                        .......|++.|+|||
T Consensus       170 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  193 (287)
T 2wei_A          170 LSTCFQQN--------------------------------------------------------TKMKDRIGTAYYIAPE  193 (287)
T ss_dssp             GGGTBCCC--------------------------------------------------------SSCSCHHHHHTTCCHH
T ss_pred             cceeecCC--------------------------------------------------------CccccccCcccccChH
Confidence            97432110                                                        0011236888999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+ .++.++||||||+++|+|++|..||......+....+..+...++....... +.++.+||.+||+.||.+||| 
T Consensus       194 ~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~dp~~Rps-  270 (287)
T 2wei_A          194 VLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI-SDDAKDLIRKMLTFHPSLRIT-  270 (287)
T ss_dssp             HHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS-CHHHHHHHHHHTCSSGGGSCC-
T ss_pred             HhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc-CHHHHHHHHHHcccChhhCcC-
Confidence            9876 4899999999999999999999999998888888888877655443332333 348999999999999999999 


Q ss_pred             CCChHHHHcCCCcCCCCc
Q 013016          397 KRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       397 ~~~~~ell~hp~~~~~~~  414 (451)
                         +.|+|+||||++..+
T Consensus       271 ---~~ell~hp~~~~~~~  285 (287)
T 2wei_A          271 ---ATQCLEHPWIQKYSS  285 (287)
T ss_dssp             ---HHHHHHSHHHHHHCC
T ss_pred             ---HHHHhcCHHHhcccc
Confidence               999999999987543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-46  Score=357.16  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=213.3

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|++.+.||+|+||.||+|.+..+.          .||+|++......    .+.+.+|+.++++++||||++++
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~   71 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLY   71 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTE----------EEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             EeChhhceeeheecCCCccEEEEEEecCCC----------eEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEE
Confidence            345578999999999999999999987543          3999999855322    24567799999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+.+..|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  150 (269)
T 4hcu_A           72 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF  150 (269)
T ss_dssp             EEECSSSSEEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCT
T ss_pred             EEEecCCceEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccc
Confidence            99999999999999999999999987653 45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                      .........||+.|+||
T Consensus       151 g~~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aP  176 (269)
T 4hcu_A          151 GMTRFVLDD------------------------------------------------------QYTSSTGTKFPVKWASP  176 (269)
T ss_dssp             TGGGGBCCH------------------------------------------------------HHHSTTSTTCCGGGCCH
T ss_pred             ccccccccc------------------------------------------------------ccccccCcccccccCCH
Confidence            998432110                                                      00011123567789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||++|+|++ |+.||......+....+........    +...+.++.+|+.+||+.||++||
T Consensus       177 E~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp  252 (269)
T 4hcu_A          177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----PRLASTHVYQIMNHCWRERPEDRP  252 (269)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC----CCcCCHHHHHHHHHHccCCcccCc
Confidence            99998899999999999999999999 9999999888888888877633222    222344899999999999999999


Q ss_pred             CCCCChHHHHcC
Q 013016          395 GSKRGAADVKTH  406 (451)
Q Consensus       395 t~~~~~~ell~h  406 (451)
                      +    +.++++|
T Consensus       253 s----~~~ll~~  260 (269)
T 4hcu_A          253 A----FSRLLRQ  260 (269)
T ss_dssp             C----HHHHHHH
T ss_pred             C----HHHHHHH
Confidence            9    9999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.8e-47  Score=367.90  Aligned_cols=257  Identities=23%  Similarity=0.336  Sum_probs=206.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++......  .....+.+|+.++++++||||+++++++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGD---------LFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEE   77 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCc---------EEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEee
Confidence            679999999999999999999987655         4999999865322  23455678999999999999999999998


Q ss_pred             eCC--eEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE----ccCCCEEE
Q 013016          160 ASN--FSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV----RSDGHIML  232 (451)
Q Consensus       160 ~~~--~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl  232 (451)
                      ..+  +.|+||||++|++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (319)
T 4euu_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKL  157 (319)
T ss_dssp             CTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEE
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEE
Confidence            765  88999999999999999876532 349999999999999999999999999999999999999    77788999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||+.|
T Consensus       158 ~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  181 (319)
T 4euu_A          158 TDFGAARELEDD--------------------------------------------------------EQFVSLYGTEEY  181 (319)
T ss_dssp             CCCTTCEECCTT--------------------------------------------------------CCBCCCCSCGGG
T ss_pred             ccCCCceecCCC--------------------------------------------------------CceeecccCCCc
Confidence            999998532211                                                        011124799999


Q ss_pred             cCccccc--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhcCCCCC---------------
Q 013016          313 VSPEVAS--------GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTF---------------  365 (451)
Q Consensus       313 ~aPE~~~--------~~~~~~~~DIwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~---------------  365 (451)
                      +|||++.        +..++.++|||||||++|+|++|+.||....    ..+.+..+..+.+..               
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (319)
T 4euu_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (319)
T ss_dssp             CCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCcccc
Confidence            9999986        5678999999999999999999999997532    344555555443211               


Q ss_pred             ----CC-CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCC
Q 013016          366 ----PT-QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHP  407 (451)
Q Consensus       366 ----~~-~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp  407 (451)
                          +. .......+..+.+||.+||++||++|||    ++|+|+||
T Consensus       262 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s----~~ell~h~  304 (319)
T 4euu_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG----FDQFFAET  304 (319)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC----HHHHHHHH
T ss_pred             CccCCcccccchhHHHHhHHHHHHhccCChhhhcc----HHHhhhcc
Confidence                10 0111122347889999999999999999    99999986

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.2e-46  Score=371.64  Aligned_cols=265  Identities=19%  Similarity=0.272  Sum_probs=217.4

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|.+.++||+|+||+||+|.+....+.  ....+..||||++....  .......+.+|+++++++ +||||++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTT--CTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEcccccc--ccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            3347899999999999999999998654321  12233469999997652  234456778899999999 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                      +++...+..|+||||+.+|+|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            99999999999999999999999998754              2459999999999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++........                                                     ..
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~-----------------------------------------------------~~  248 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDY-----------------------------------------------------YK  248 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCT-----------------------------------------------------TC
T ss_pred             EEEcCCCcEEEcccCcccccccccc-----------------------------------------------------cc
Confidence            9999999999999999853321100                                                     01


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......||+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...+.++.+
T Consensus       249 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~  324 (382)
T 3tt0_A          249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK----PSNCTNELYM  324 (382)
T ss_dssp             CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC----CSSCCHHHHH
T ss_pred             cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CccCCHHHHH
Confidence            1112357888999999999999999999999999999999 9999999888888777766543221    1223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+||+.||++||+    +.||+++
T Consensus       325 li~~~l~~dP~~Rps----~~ell~~  346 (382)
T 3tt0_A          325 MMRDCWHAVPSQRPT----FKQLVED  346 (382)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcCCChhhCcC----HHHHHHH
Confidence            999999999999999    9999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=8.4e-49  Score=390.49  Aligned_cols=255  Identities=16%  Similarity=0.188  Sum_probs=199.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHH---HHHHCCCCCcccee
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK---ILKMLDHPFLPTLY  155 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~nIv~l~  155 (451)
                      .++|.+.+.||+|+||+||+|.++.+++         .||||++...........+.+.+|+.   ++++++|||||+++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~  142 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGE---------SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH  142 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCC---------EEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCc---------EEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHH
Confidence            4779999999999999999999876654         49999997543333345566778984   45556899999998


Q ss_pred             -------EEEEeCC-----------------eEEEEEeeccCCchhhhhhhCCC-----CCCCHHHHHHHHHHHHHHHHH
Q 013016          156 -------AEFEASN-----------------FSCIVMEFCSGGDLHSLRHKQPH-----KRFSLTSARFYAAEVLVALEY  206 (451)
Q Consensus       156 -------~~~~~~~-----------------~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~  206 (451)
                             +++...+                 ..||||||+ +|+|.+++.....     ..+++..++.|+.||+.||+|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~  221 (377)
T 3byv_A          143 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLAS  221 (377)
T ss_dssp             HCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHH
Confidence                   7776554                 389999999 7899999876421     123358888999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCcccc
Q 013016          207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQ  286 (451)
Q Consensus       207 LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (451)
                      ||++||+||||||+|||++.++.+||+|||++....                                            
T Consensus       222 LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~--------------------------------------------  257 (377)
T 3byv_A          222 LHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG--------------------------------------------  257 (377)
T ss_dssp             HHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT--------------------------------------------
T ss_pred             HHhCCeecCCCCHHHEEEcCCCCEEEEechhheecC--------------------------------------------
Confidence            999999999999999999999999999999984211                                            


Q ss_pred             ccCCCcccccccccccccccccCCCccCcccccCC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013016          287 TLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-----------SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL  355 (451)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~  355 (451)
                                    ......+| +.|+|||++.+.           .++.++|||||||++|||++|+.||.........
T Consensus       258 --------------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~  322 (377)
T 3byv_A          258 --------------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGS  322 (377)
T ss_dssp             --------------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCS
T ss_pred             --------------CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccch
Confidence                          01113467 899999999887           7999999999999999999999999875544433


Q ss_pred             HHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       356 ~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ..+....        . ..+.++.+||.+||+.||++||+    +.|+++||||+++...
T Consensus       323 ~~~~~~~--------~-~~~~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~f~~~~~~  369 (377)
T 3byv_A          323 EWIFRSC--------K-NIPQPVRALLEGFLRYPKEDRLL----PLQAMETPEYEQLRTE  369 (377)
T ss_dssp             GGGGSSC--------C-CCCHHHHHHHHHHTCSSGGGCCC----HHHHHTSHHHHHHHHH
T ss_pred             hhhhhhc--------c-CCCHHHHHHHHHHcCCCchhCCC----HHHHhhChHHHHHHHH
Confidence            3333221        1 22348999999999999999999    9999999999985543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=8.9e-46  Score=365.22  Aligned_cols=260  Identities=27%  Similarity=0.388  Sum_probs=210.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++.... ........+.+|+.+++.++||||+++++++.
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   93 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGE---------KVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFT   93 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCC---------EEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEe
Confidence            689999999999999999999887665         49999997542 22334566778999999999999999999998


Q ss_pred             eCCe------EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASNF------SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~~------~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..+.      +|+||||+. ++|.+++..    .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        94 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~  168 (353)
T 3coi_A           94 PASSLRNFYDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL  168 (353)
T ss_dssp             SCSSGGGCCCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEEC
T ss_pred             cccccccceeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEe
Confidence            7654      599999995 788887643    49999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                          ......||+.|+
T Consensus       169 Dfg~~~~~~~----------------------------------------------------------~~~~~~~t~~y~  190 (353)
T 3coi_A          169 DFGLARHADA----------------------------------------------------------EMTGYVVTRWYR  190 (353)
T ss_dssp             STTCTTC------------------------------------------------------------------CCSBCCS
T ss_pred             ecccccCCCC----------------------------------------------------------CccccccCcCcC
Confidence            9999742110                                                          011237899999


Q ss_pred             CcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-----------------------CCCC--
Q 013016          314 SPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL-----------------------TFPT--  367 (451)
Q Consensus       314 aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----------------------~~~~--  367 (451)
                      |||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....                       ..+.  
T Consensus       191 aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (353)
T 3coi_A          191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD  270 (353)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCC
T ss_pred             CHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCcc
Confidence            9999987 6789999999999999999999999998877666555543110                       0000  


Q ss_pred             -CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          368 -QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       368 -~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                       .......+.++.+||.+||+.||++|||    +.++|+||||+....+.
T Consensus       271 ~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~f~~~~~~~  316 (353)
T 3coi_A          271 FTQLFPRASPQAADLLEKMLELDVDKRLT----AAQALTHPFFEPFRDPE  316 (353)
T ss_dssp             TTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGGGTTTCCGG
T ss_pred             HHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcchhhccCcc
Confidence             0011123448999999999999999999    99999999999866543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.8e-48  Score=385.84  Aligned_cols=264  Identities=19%  Similarity=0.227  Sum_probs=193.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC--CCCCcccee--
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML--DHPFLPTLY--  155 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~nIv~l~--  155 (451)
                      .+|.+.++||+|+||+||+|.+..+++         .||||++.............+..|+.+++.+  +||||++++  
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~  132 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLE---------DFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRR  132 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------C
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCc---------eeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhcee
Confidence            569999999999999999999887665         4999999876543445556666775554444  699987755  


Q ss_pred             -----EEEEeC-----------------CeEEEEEeeccCCchhhhhhhCCCCCCCHHHH------HHHHHHHHHHHHHH
Q 013016          156 -----AEFEAS-----------------NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA------RFYAAEVLVALEYL  207 (451)
Q Consensus       156 -----~~~~~~-----------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~------~~i~~qil~aL~~L  207 (451)
                           +++...                 ..+||||||++ |+|.+++.... ..+++..+      ..++.||+.||+||
T Consensus       133 ~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~L  210 (371)
T 3q60_A          133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANL  210 (371)
T ss_dssp             BCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence                 555443                 34899999997 89999997642 23455555      67789999999999


Q ss_pred             HHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccc
Q 013016          208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQT  287 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (451)
                      |++||+||||||+|||++.+|.+||+|||++.....                                            
T Consensus       211 H~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~--------------------------------------------  246 (371)
T 3q60_A          211 QSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT--------------------------------------------  246 (371)
T ss_dssp             HHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTC--------------------------------------------
T ss_pred             HHCCCccCcCCHHHEEECCCCCEEEEecceeeecCC--------------------------------------------
Confidence            999999999999999999999999999999843210                                            


Q ss_pred             cCCCcccccccccccccccccCCCccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH---Hhc
Q 013016          288 LTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG--GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT--LRN---IVK  360 (451)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~--~~~---i~~  360 (451)
                                    ......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||........  +..   ...
T Consensus       247 --------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~  312 (371)
T 3q60_A          247 --------------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVP  312 (371)
T ss_dssp             --------------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSC
T ss_pred             --------------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhc
Confidence                          0002356799999999987  6789999999999999999999999987533211  000   001


Q ss_pred             CCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccc
Q 013016          361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI  417 (451)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~  417 (451)
                      ....+...... ..+..+.+||.+||+.||++|||    +.++|+||||+++.+...
T Consensus       313 ~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~  364 (371)
T 3q60_A          313 GTDSLAFGSCT-PLPDFVKTLIGRFLNFDRRRRLL----PLEAMETPEFLQLQNEIS  364 (371)
T ss_dssp             CCCSCCCTTSS-CCCHHHHHHHHHHTCSSTTTCCC----HHHHTTSHHHHHHHHHHH
T ss_pred             cccccchhhcc-CCCHHHHHHHHHHcCCChhhCCC----HHHHhcCHHHHHHHHHHh
Confidence            11111111112 33448999999999999999999    999999999999776543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.3e-46  Score=373.42  Aligned_cols=257  Identities=28%  Similarity=0.425  Sum_probs=203.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-----------C
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-----------H  148 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h  148 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||++.....    ....+..|+.+++++.           |
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~   85 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNT---------HVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGA   85 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCc---------EEEEEEecCCcc----chhhhhHHHHHHHHhhcccccchhcccc
Confidence            689999999999999999999876655         499999975432    2345566888888775           8


Q ss_pred             CCccceeEEEEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEE
Q 013016          149 PFLPTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVL  223 (451)
Q Consensus       149 ~nIv~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIl  223 (451)
                      +||+++++++...+    ++++||||+ +++|.+++.......+++..++.++.||+.||+|||++ ||+||||||+|||
T Consensus        86 ~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl  164 (373)
T 1q8y_A           86 NHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  164 (373)
T ss_dssp             TTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             chHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence            99999999998654    899999999 99999999887667799999999999999999999998 9999999999999


Q ss_pred             EccC------CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccc
Q 013016          224 VRSD------GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAE  297 (451)
Q Consensus       224 l~~~------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (451)
                      ++.+      +.+||+|||++.....                                                      
T Consensus       165 l~~~~~~~~~~~~kl~Dfg~a~~~~~------------------------------------------------------  190 (373)
T 1q8y_A          165 MEIVDSPENLIQIKIADLGNACWYDE------------------------------------------------------  190 (373)
T ss_dssp             EEEEETTTTEEEEEECCCTTCEETTB------------------------------------------------------
T ss_pred             EeccCCCcCcceEEEcccccccccCC------------------------------------------------------
Confidence            9543      4799999999843211                                                      


Q ss_pred             cccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcCCCCCCC----
Q 013016          298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS------NETTLRNIVKKPLTFPT----  367 (451)
Q Consensus       298 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~----  367 (451)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....      ....+..+.......+.    
T Consensus       191 ----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  266 (373)
T 1q8y_A          191 ----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR  266 (373)
T ss_dssp             ----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHH
T ss_pred             ----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHh
Confidence                0112368999999999999999999999999999999999999998654      22333333221111110    


Q ss_pred             ---------------------------------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          368 ---------------------------------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       368 ---------------------------------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                                       ...+...+.++.+||.+||+.||.+|||    +.|||+||||++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~  340 (373)
T 1q8y_A          267 NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDT  340 (373)
T ss_dssp             HCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTC
T ss_pred             ccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC----HHHHhhChhhhcc
Confidence                                             0011122347889999999999999999    9999999999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=8.2e-47  Score=370.28  Aligned_cols=254  Identities=26%  Similarity=0.397  Sum_probs=182.3

Q ss_pred             CCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           80 RDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ++|.+.+ .||+|+||+||+|.++.+++         .||||++.....    ..   ......++.+.|+||+++++++
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~----~~---~e~~~~~~~~~h~~i~~~~~~~   91 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQ---------KCALKLLYDSPK----AR---QEVDHHWQASGGPHIVCILDVY   91 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEESSHH----HH---HHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCC---------EEEEEEecCcHH----HH---HHHHHHHHhcCCCChHHHHHHH
Confidence            7899965 59999999999999987665         499999975421    11   1123346778999999999999


Q ss_pred             Ee----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CCCEE
Q 013016          159 EA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIM  231 (451)
Q Consensus       159 ~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~~~k  231 (451)
                      ..    ...+|+||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+|
T Consensus        92 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~k  171 (336)
T 3fhr_A           92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK  171 (336)
T ss_dssp             EEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEE
T ss_pred             hhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEE
Confidence            76    456899999999999999998876667999999999999999999999999999999999999986   45599


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.....                                                         .......||+.
T Consensus       172 l~Dfg~~~~~~~---------------------------------------------------------~~~~~~~~t~~  194 (336)
T 3fhr_A          172 LTDFGFAKETTQ---------------------------------------------------------NALQTPCYTPY  194 (336)
T ss_dssp             ECCCTTCEEC----------------------------------------------------------------------
T ss_pred             Eeccccceeccc---------------------------------------------------------cccccCCCCcC
Confidence            999999842210                                                         00112378999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      |+|||++.+..++.++|||||||++|+|++|+.||........    ...+......++...+.. .+.++.+||.+||+
T Consensus       195 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~  273 (336)
T 3fhr_A          195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE-VSEDAKQLIRLLLK  273 (336)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTT-CCHHHHHHHHHHSC
T ss_pred             ccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhcc-CCHHHHHHHHHHCC
Confidence            9999999888899999999999999999999999987654433    222333333333333333 34489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcCCCcCC
Q 013016          388 KDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .||.+|||    +.|+|+||||++
T Consensus       274 ~dP~~Rpt----~~ell~hp~~~~  293 (336)
T 3fhr_A          274 TDPTERLT----ITQFMNHPWINQ  293 (336)
T ss_dssp             SSGGGSCC----HHHHHHSHHHHT
T ss_pred             CChhHCcC----HHHHhcCccccc
Confidence            99999999    999999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.2e-46  Score=369.45  Aligned_cols=264  Identities=25%  Similarity=0.368  Sum_probs=206.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH--------HHHHHHHHHHHHHHHHHHCCCCCc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL--------EKKKKVHRAEMEKKILKMLDHPFL  151 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~nI  151 (451)
                      ++|.+.+.||+|+||.||+|.+..+.          .||||++.....        ........+.+|+.++++++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSEGI----------PVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTTSC----------EEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cceEEeEEeccCCCEEEEEEECCCCC----------eEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            88999999999999999999876532          499999864321        122334677889999999999999


Q ss_pred             cceeEEEEe-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          152 PTLYAEFEA-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       152 v~l~~~~~~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      +++++++..     ...+|+||||+. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~  169 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD  169 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence            999999954     347899999995 7888877754 346999999999999999999999999999999999999999


Q ss_pred             CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccc
Q 013016          227 DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF  306 (451)
Q Consensus       227 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (451)
                      ++.+||+|||++......                                                        ......
T Consensus       170 ~~~~kl~Dfg~~~~~~~~--------------------------------------------------------~~~~~~  193 (362)
T 3pg1_A          170 NNDITICDFNLAREDTAD--------------------------------------------------------ANKTHY  193 (362)
T ss_dssp             TCCEEECCTTC---------------------------------------------------------------------
T ss_pred             CCCEEEEecCcccccccc--------------------------------------------------------ccccee
Confidence            999999999998421100                                                        011124


Q ss_pred             ccCCCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC---------------------
Q 013016          307 VGTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT---------------------  364 (451)
Q Consensus       307 ~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~---------------------  364 (451)
                      .||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+.+..+......                     
T Consensus       194 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (362)
T 3pg1_A          194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS  273 (362)
T ss_dssp             --CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTC
T ss_pred             cccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhh
Confidence            78899999999987 67899999999999999999999999998877766665431110                     


Q ss_pred             ---CCCCC---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          365 ---FPTQS---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       365 ---~~~~~---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                         .+...   .....+..+.+||.+||++||.+|||    +.|+|+||||+++..+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~~~  326 (362)
T 3pg1_A          274 LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIS----TEQALRHPYFESLFDP  326 (362)
T ss_dssp             CCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGTTTCCG
T ss_pred             cccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCC----HHHHHcCchhhhccCc
Confidence               00000   00112347999999999999999999    9999999999996444

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.6e-47  Score=359.30  Aligned_cols=260  Identities=24%  Similarity=0.353  Sum_probs=216.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.+.||+|+||.||+|.++.+++         .||+|++..... .....+.+..|+.++++++||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGK---------ILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRI   74 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCc---------EEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            3789999999999999999999887665         499999975432 223456677899999999999999999988


Q ss_pred             Ee--CCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeccCCCCcEEEccCCC
Q 013016          159 EA--SNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       159 ~~--~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-----ivH~Dlkp~NIll~~~~~  229 (451)
                      ..  .+..|+||||++|++|.+++...  ....+++..++.++.||+.||+|||++|     |+||||||+|||++.++.
T Consensus        75 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~  154 (279)
T 2w5a_A           75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN  154 (279)
T ss_dssp             EEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSC
T ss_pred             ecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCC
Confidence            54  56899999999999999998753  2345999999999999999999999999     999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++......                                                       ........|+
T Consensus       155 ~kl~dfg~~~~~~~~-------------------------------------------------------~~~~~~~~~~  179 (279)
T 2w5a_A          155 VKLGDFGLARILNHD-------------------------------------------------------TSFAKTFVGT  179 (279)
T ss_dssp             EEECCCCHHHHC----------------------------------------------------------CHHHHHHHSC
T ss_pred             EEEecCchheeeccc-------------------------------------------------------cccccccCCC
Confidence            999999997432100                                                       0001124689


Q ss_pred             CCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       310 ~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||......+....+..+.....    +...+.++.+||.+||+.|
T Consensus       180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~~  255 (279)
T 2w5a_A          180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI----PYRYSDELNEIITRMLNLK  255 (279)
T ss_dssp             CTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSS
T ss_pred             ccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccC----CcccCHHHHHHHHHHcCCC
Confidence            999999999998899999999999999999999999999888777777777654211    1123448999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCC
Q 013016          390 PCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      |.+||+    +.||++|+|+.+
T Consensus       256 p~~Rps----~~~ll~~~~~~~  273 (279)
T 2w5a_A          256 DYHRPS----VEEILENPLILE  273 (279)
T ss_dssp             GGGSCC----HHHHHTSTTCCG
T ss_pred             cccCCC----HHHHHhChhhhh
Confidence            999999    999999999988

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=364.93  Aligned_cols=265  Identities=24%  Similarity=0.344  Sum_probs=206.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.++.+++         .||||++....   ......+.+|+.++++++||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   78 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDK---------RVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILG   78 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTE---------EEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCe---------EEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEecc
Confidence            789999999999999999999987655         49999987542   334566778999999999999999999873


Q ss_pred             --------------eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          160 --------------ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       160 --------------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                                    ..+..|+||||+. |+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  154 (320)
T 2i6l_A           79 PSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN  154 (320)
T ss_dssp             TTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE
T ss_pred             ccccccccccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence                          4468899999995 699998865   4589999999999999999999999999999999999997


Q ss_pred             -cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          226 -SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       226 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                       .++.+||+|||++........                                                    ......
T Consensus       155 ~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------~~~~~~  182 (320)
T 2i6l_A          155 TEDLVLKIGDFGLARIMDPHYS----------------------------------------------------HKGHLS  182 (320)
T ss_dssp             TTTTEEEECCCTTCBCC------------------------------------------------------------CCC
T ss_pred             CCCCeEEEccCccccccCCCcc----------------------------------------------------cccccc
Confidence             567999999999853221000                                                    000111


Q ss_pred             ccccCCCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC-----------------
Q 013016          305 SFVGTHEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP-----------------  366 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~-----------------  366 (451)
                      ...||..|+|||++.+ ..++.++|||||||++|+|++|+.||......+.+..+........                 
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (320)
T 2i6l_A          183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRN  262 (320)
T ss_dssp             GGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHH
T ss_pred             cccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccc
Confidence            2367899999999876 6789999999999999999999999999887776666654321110                 


Q ss_pred             -----CCC---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          367 -----TQS---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       367 -----~~~---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                           ...   .....+.++.+||.+||+.||.+|||    +.|+|+||||+..+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          263 DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             HTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHTSHHHHTTCC--
T ss_pred             cccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC----HHHHhCCcccccccCcc
Confidence                 000   00123448999999999999999999    99999999999877654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-46  Score=366.09  Aligned_cols=261  Identities=19%  Similarity=0.284  Sum_probs=214.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.+.||+|+||.||+|.+.....    ...+..||||++....  .......+.+|+.++++++||||++++++
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  118 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLP----YEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGV  118 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSST----TSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCC----CCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            34789999999999999999999875321    1223359999998653  23345677889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQP----------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYR  215 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~  215 (451)
                      +...+..|+||||+++++|.+++....                      ...+++..++.++.||+.||.|||++||+||
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~  198 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  198 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            999999999999999999999998743                      1569999999999999999999999999999


Q ss_pred             cCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccc
Q 013016          216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFV  295 (451)
Q Consensus       216 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (451)
                      ||||+|||++.++.+||+|||++.......                                                  
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------  228 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSAD--------------------------------------------------  228 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGG--------------------------------------------------
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCc--------------------------------------------------
Confidence            999999999999999999999984321100                                                  


Q ss_pred             cccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcC
Q 013016          296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS  374 (451)
Q Consensus       296 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  374 (451)
                         .........||+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...
T Consensus       229 ---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~  301 (343)
T 1luf_A          229 ---YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC----PENC  301 (343)
T ss_dssp             ---CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC----CTTC
T ss_pred             ---cccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCC----CCCC
Confidence               0011112367889999999998899999999999999999999 9999999888888888777654221    1223


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.++.+||.+||+.||.+||+    +.++++
T Consensus       302 ~~~l~~li~~~l~~~p~~Rps----~~~~~~  328 (343)
T 1luf_A          302 PLELYNLMRLCWSKLPADRPS----FCSIHR  328 (343)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             CHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence            448999999999999999999    888875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-46  Score=367.16  Aligned_cols=266  Identities=16%  Similarity=0.264  Sum_probs=211.8

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      +.+..++|.+.+.||+|+||.||+|.+....+    ...+..||||++....  .......+.+|+.+++++ .||||++
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~  113 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISK----TGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVN  113 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSS----SSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeecccc----CCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            34445789999999999999999999754321    1223459999997542  233456778899999999 8999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH---------------------KRFSLTSARFYAAEVLVALEYLHMLGI  212 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~~LH~~gi  212 (451)
                      +++++...+..|+||||+++|+|.+++.....                     ..+++..++.++.||+.||+|||++||
T Consensus       114 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  193 (344)
T 1rjb_A          114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  193 (344)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999976532                     248999999999999999999999999


Q ss_pred             eeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCc
Q 013016          213 IYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR  292 (451)
Q Consensus       213 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (451)
                      +||||||+|||++.++.+||+|||++......                                                
T Consensus       194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~------------------------------------------------  225 (344)
T 1rjb_A          194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSD------------------------------------------------  225 (344)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGC------------------------------------------------
T ss_pred             ccCCCChhhEEEcCCCcEEeCCCccCcccccC------------------------------------------------
Confidence            99999999999999999999999998432110                                                


Q ss_pred             ccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCC
Q 013016          293 LFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPS  371 (451)
Q Consensus       293 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  371 (451)
                           ..........||+.|+|||++.+..++.++|||||||++|+|+| |..||........+..++......+.   +
T Consensus       226 -----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~  297 (344)
T 1rjb_A          226 -----SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ---P  297 (344)
T ss_dssp             -----TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC---C
T ss_pred             -----ccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCC---C
Confidence                 00011123467889999999999899999999999999999998 99999987766666665554332221   1


Q ss_pred             CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       372 ~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ...+.++.+||.+||+.||.+||+    +.+|++|
T Consensus       298 ~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~~  328 (344)
T 1rjb_A          298 FYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF  328 (344)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcC----HHHHHHH
Confidence            223448999999999999999999    9999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=7.1e-46  Score=356.80  Aligned_cols=273  Identities=26%  Similarity=0.407  Sum_probs=207.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++...    ......+.+|+.++++++||||+++++++.
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   72 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSR---------YYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWL   72 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCe---------EEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence            679999999999999999999876655         4999999643    234466778999999999999999999886


Q ss_pred             e-------------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          160 A-------------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       160 ~-------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      +             .+..|+||||++|++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~  151 (303)
T 1zy4_A           73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE  151 (303)
T ss_dssp             ECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             hhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence            5             467899999999999999998643 45889999999999999999999999999999999999999


Q ss_pred             CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccc
Q 013016          227 DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF  306 (451)
Q Consensus       227 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (451)
                      ++.+||+|||++.............                              ..           ............
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~------------------------------~~-----------~~~~~~~~~~~~  190 (303)
T 1zy4_A          152 SRNVKIGDFGLAKNVHRSLDILKLD------------------------------SQ-----------NLPGSSDNLTSA  190 (303)
T ss_dssp             TSCEEECCCCCCSCTTC---------------------------------------------------------------
T ss_pred             CCCEEEeeCcchhhcccccchhccc------------------------------cc-----------cccccccccccC
Confidence            9999999999985432110000000                              00           000001111234


Q ss_pred             ccCCCccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          307 VGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       307 ~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      .||+.|+|||++.+. .++.++|||||||++|+|++   ||... ........+......++....... +..+.+||.+
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~  266 (303)
T 1zy4_A          191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNK-MKVEKKIIRL  266 (303)
T ss_dssp             ---CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTT-SHHHHHHHHH
T ss_pred             CCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccc-hHHHHHHHHH
Confidence            799999999999875 68999999999999999998   55532 233455555555555554443333 3379999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ||+.||.+|||    +.++++||||+...+.
T Consensus       267 ~l~~dp~~Rps----~~~ll~h~~~~~~~~~  293 (303)
T 1zy4_A          267 LIDHDPNKRPG----ARTLLNSGWLPVKHQD  293 (303)
T ss_dssp             HTCSSGGGSCC----HHHHHHSSCSCCCCHH
T ss_pred             HHhcCcccCcC----HHHHhCCCCcCCCChH
Confidence            99999999999    9999999999986554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.4e-46  Score=362.53  Aligned_cols=263  Identities=17%  Similarity=0.277  Sum_probs=214.4

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.+.||+|+||.||+|.+.....    ...+..||||++....  .......+.+|+.+++.++||||+++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~   93 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKG----RAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYG   93 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGG----CSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCc----ccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence            344789999999999999999999854321    1223469999997542  2344567788999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPH----------------------KRFSLTSARFYAAEVLVALEYLHMLGIIY  214 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------------~~l~~~~~~~i~~qil~aL~~LH~~givH  214 (451)
                      ++...+..|+||||++|++|.+++.....                      ..+++..++.++.||+.||+|||++||+|
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  173 (314)
T 2ivs_A           94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH  173 (314)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            99999999999999999999999987532                      34899999999999999999999999999


Q ss_pred             ccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccc
Q 013016          215 RDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF  294 (451)
Q Consensus       215 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (451)
                      |||||+|||++.++.+||+|||++........                                                
T Consensus       174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------  205 (314)
T 2ivs_A          174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS------------------------------------------------  205 (314)
T ss_dssp             CCCSGGGEEEETTTEEEECCCTTCEECTTTSC------------------------------------------------
T ss_pred             cccchheEEEcCCCCEEEcccccccccccccc------------------------------------------------
Confidence            99999999999999999999999853321100                                                


Q ss_pred             ccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCc
Q 013016          295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM  373 (451)
Q Consensus       295 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  373 (451)
                           ........|++.|+|||++.+..++.++|||||||++|+|++ |..||...........+........    +..
T Consensus       206 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~  276 (314)
T 2ivs_A          206 -----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER----PDN  276 (314)
T ss_dssp             -----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC----CTT
T ss_pred             -----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCC----Ccc
Confidence                 001112357788999999998889999999999999999999 9999998887777776666542211    122


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+.++.+||.+||+.||.+||+    +.+|+++
T Consensus       277 ~~~~~~~li~~~l~~dp~~Rps----~~~l~~~  305 (314)
T 2ivs_A          277 CSEEMYRLMLQCWKQEPDKRPV----FADISKD  305 (314)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            3448999999999999999999    9998864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.8e-46  Score=370.55  Aligned_cols=261  Identities=18%  Similarity=0.292  Sum_probs=207.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|.+.+.||+|+||.||+|.+.....    ...+..||||++....  .......+.+|+.++.++ +||||+++++++
T Consensus        22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           22 DRLKLGKPLGRGAFGQVIEADAFGIDK----TATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSS----TTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cceeeceeecCCCCceEEEEEeccccc----cccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            789999999999999999999754321    1233469999997642  223346678899999999 799999999999


Q ss_pred             EeCC-eEEEEEeeccCCchhhhhhhCCC----------------------------------------------------
Q 013016          159 EASN-FSCIVMEFCSGGDLHSLRHKQPH----------------------------------------------------  185 (451)
Q Consensus       159 ~~~~-~~~lV~E~~~ggsL~~~l~~~~~----------------------------------------------------  185 (451)
                      ...+ .+++||||++||+|.+++.....                                                    
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            8755 59999999999999999976532                                                    


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCC
Q 013016          186 ------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS  253 (451)
Q Consensus       186 ------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  253 (451)
                                  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......         
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~---------  246 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---------  246 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC---------
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc---------
Confidence                        12899999999999999999999999999999999999999999999999998532110         


Q ss_pred             CCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHH
Q 013016          254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFG  333 (451)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG  333 (451)
                                                                  ..........||+.|+|||++.+..++.++||||||
T Consensus       247 --------------------------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  282 (359)
T 3vhe_A          247 --------------------------------------------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  282 (359)
T ss_dssp             --------------------------------------------TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             --------------------------------------------ccchhccccCCCceeEChhhhcCCCCCchhhhhhHH
Confidence                                                        001111234688999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          334 IFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       334 ~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |++|+|++ |..||.+....+.+...+........   +...+.++.++|.+||+.||.+|||    +.||++|
T Consensus       283 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~  349 (359)
T 3vhe_A          283 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  349 (359)
T ss_dssp             HHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHccCChhhCCC----HHHHHHH
Confidence            99999998 99999887655544443332221111   1223448999999999999999999    9999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.3e-46  Score=364.89  Aligned_cols=257  Identities=21%  Similarity=0.293  Sum_probs=206.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||++....     ....+..|+.+++++ +|+||+++++++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-----~~~~~~~E~~~l~~l~~h~~i~~~~~~~   74 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNE---------YVAIKLEPMKS-----RAPQLHLEYRFYKQLGSGDGIPQVYYFG   74 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTE---------EEEEEEEETTC-----SSCCHHHHHHHHHHHCSCTTSCCEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCc---------EEEEEEecccc-----chHHHHHHHHHHHHhhCCCCCCEEEEEE
Confidence            679999999999999999999876655         49999987542     224566799999999 899999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC-----EEEe
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH-----IMLS  233 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~-----~kl~  233 (451)
                      ...+..|+||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.     +||+
T Consensus        75 ~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~  152 (330)
T 2izr_A           75 PCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHII  152 (330)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred             ecCCccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence            9999999999999 99999999875 356999999999999999999999999999999999999998887     9999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++...........                                                .........+||+.|+
T Consensus       153 DFg~a~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~y~  184 (330)
T 2izr_A          153 DFALAKEYIDPETKKH------------------------------------------------IPYREHKSLTGTARYM  184 (330)
T ss_dssp             CCTTCEESBCTTTCCB------------------------------------------------CCCCCCCCCCSCTTTC
T ss_pred             EcccceeeecCCCCcc------------------------------------------------ccccccCCcCCCcccc
Confidence            9999864321111000                                                0001122458999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS---NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |||++.+..++.++|||||||++|+|++|+.||....   ..+.+..+.......+........+ ++.+|+.+||+.||
T Consensus       185 aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p  263 (330)
T 2izr_A          185 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDF  263 (330)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCT
T ss_pred             ChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999998743   3344455444333222221122234 89999999999999


Q ss_pred             CCcCCCCCChHHHHc
Q 013016          391 CNRLGSKRGAADVKT  405 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~  405 (451)
                      .+||+    +++|++
T Consensus       264 ~~RP~----~~~l~~  274 (330)
T 2izr_A          264 FEKPD----YDYLRK  274 (330)
T ss_dssp             TCCCC----HHHHHH
T ss_pred             CCCCC----HHHHHH
Confidence            99999    777765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.1e-46  Score=353.86  Aligned_cols=253  Identities=21%  Similarity=0.280  Sum_probs=212.1

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.+.||+|+||.||+|.++.+.          .||+|++......    ...+.+|+.++++++||||+++++
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~   70 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKGQY----------DVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYG   70 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTE----------EEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             echhheeeeeeeccCCCceEEEEEecCce----------eEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEE
Confidence            34478999999999999999999887543          3999999754322    245677999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+..|+||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  149 (268)
T 3sxs_A           71 VCSKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG  149 (268)
T ss_dssp             EECSSSSEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTT
T ss_pred             EEccCCceEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCc
Confidence            999999999999999999999998764 2459999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.......                                                      ........||+.|+|||
T Consensus       150 ~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE  175 (268)
T 3sxs_A          150 MTRYVLDDQ------------------------------------------------------YVSSVGTKFPVKWSAPE  175 (268)
T ss_dssp             CEEECCTTC------------------------------------------------------EEECCSCCCCGGGCCHH
T ss_pred             cceecchhh------------------------------------------------------hhcccCCCcCcccCCHH
Confidence            985322110                                                      00011225677899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++||||||+++|+|++ |+.||...........+..+......    ...+..+.+||.+||+.||.+|||
T Consensus       176 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps  251 (268)
T 3sxs_A          176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP----HLASDTIYQIMYSCWHELPEKRPT  251 (268)
T ss_dssp             HHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHTTCSSGGGSCC
T ss_pred             HHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC----CcChHHHHHHHHHHcCCChhhCcC
Confidence            9998889999999999999999999 99999998888888777766543322    223448999999999999999999


Q ss_pred             CCCChHHHHcC
Q 013016          396 SKRGAADVKTH  406 (451)
Q Consensus       396 ~~~~~~ell~h  406 (451)
                          +.|++++
T Consensus       252 ----~~~ll~~  258 (268)
T 3sxs_A          252 ----FQQLLSS  258 (268)
T ss_dssp             ----HHHHHHH
T ss_pred             ----HHHHHHH
Confidence                9999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4.8e-46  Score=355.39  Aligned_cols=252  Identities=21%  Similarity=0.307  Sum_probs=208.6

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+....          .||||++......    ...+.+|+.++++++|+||++++++
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~   87 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQY----------DVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGV   87 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTE----------EEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCC----------eEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEE
Confidence            3378999999999999999999887543          3999999854322    2456779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+.+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~  166 (283)
T 3gen_A           88 CTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL  166 (283)
T ss_dssp             ECSSSSEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred             EecCCCeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccc
Confidence            999999999999999999999987642 4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                      .........||+.|+|||+
T Consensus       167 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE~  192 (283)
T 3gen_A          167 SRYVLDD------------------------------------------------------EYTSSVGSKFPVRWSPPEV  192 (283)
T ss_dssp             GGGBCCH------------------------------------------------------HHHSTTSTTSCGGGCCHHH
T ss_pred             ccccccc------------------------------------------------------ccccccCCccCcccCCHHH
Confidence            8432110                                                      0001112256788999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++||||||+++|+|++ |+.||...........+.........    ...+..+.+||.+||+.||.+||| 
T Consensus       193 ~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps-  267 (283)
T 3gen_A          193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSCWHEKADERPT-  267 (283)
T ss_dssp             HHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCC-
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC----CcCCHHHHHHHHHHccCChhHCcC-
Confidence            998899999999999999999998 99999998888888888776433222    223448999999999999999999 


Q ss_pred             CCChHHHHcC
Q 013016          397 KRGAADVKTH  406 (451)
Q Consensus       397 ~~~~~ell~h  406 (451)
                         +.++++|
T Consensus       268 ---~~~ll~~  274 (283)
T 3gen_A          268 ---FKILLSN  274 (283)
T ss_dssp             ---HHHHHHH
T ss_pred             ---HHHHHHH
Confidence               9999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.8e-46  Score=363.68  Aligned_cols=272  Identities=21%  Similarity=0.288  Sum_probs=219.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.++.....    ..+..||||++....  .......+.+|+.+++.++|+||+++++++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKD----EPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETT----EEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCC----CCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            37899999999999999999988742110    112259999997542  223345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQP--------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ...+..++||||+++++|.+++....        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            99999999999999999999887532        2457999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                     ..........||+
T Consensus       178 kl~Dfg~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~  204 (322)
T 1p4o_A          178 KIGDFGMTRDIYET-----------------------------------------------------DYYRKGGKGLLPV  204 (322)
T ss_dssp             EECCTTCCCGGGGG-----------------------------------------------------GCEEGGGSSEECG
T ss_pred             EECcCccccccccc-----------------------------------------------------cccccccCCCCCC
Confidence            99999997422100                                                     0001111236788


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      .|+|||++.+..++.++|||||||++|+|++ |..||...........+..+......    ...+..+.+||.+||+.|
T Consensus       205 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSS
T ss_pred             CccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCC
Confidence            9999999998889999999999999999999 89999998888888777765432211    223448999999999999


Q ss_pred             cCCcCCCCCChHHHHcC------CCcCCCCcccc
Q 013016          390 PCNRLGSKRGAADVKTH------PFFKGLNFALI  417 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~h------p~~~~~~~~~~  417 (451)
                      |.+||+    +.|+++|      +||+++++...
T Consensus       281 p~~Rps----~~e~l~~L~~~~~~~~~~~~~~~~  310 (322)
T 1p4o_A          281 PKMRPS----FLEIISSIKEEMEPGFREVSFYYS  310 (322)
T ss_dssp             GGGSCC----HHHHHHHHGGGSCTTHHHHCSTTS
T ss_pred             cccCcC----HHHHHHHHHHhhccCCcccccccc
Confidence            999999    8888876      77777666544

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1e-45  Score=350.78  Aligned_cols=251  Identities=25%  Similarity=0.424  Sum_probs=201.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH-HHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK-KKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..++|.+.+.||+|+||.||+|.+.+.           .||||++....... ....+.+.+|+.+++.++||||+++++
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~   73 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWIGD-----------EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG   73 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEETTE-----------EEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             chhheeeeeeeccCCCeEEEEEEEcCC-----------eEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            458899999999999999999997633           39999997654322 233466778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCCCCcEEEcc-------
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG---IIYRDLKPENVLVRS-------  226 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivH~Dlkp~NIll~~-------  226 (451)
                      ++...+..|+||||++|++|.+++..   ..+++..++.++.||+.||.|||++|   |+||||||+|||++.       
T Consensus        74 ~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~  150 (271)
T 3dtc_A           74 VCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL  150 (271)
T ss_dssp             EECCC--CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred             EEecCCceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccc
Confidence            99999999999999999999998864   46999999999999999999999999   899999999999986       


Q ss_pred             -CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          227 -DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       227 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                       ++.+||+|||++......                                                         ....
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~---------------------------------------------------------~~~~  173 (271)
T 3dtc_A          151 SNKILKITDFGLAREWHRT---------------------------------------------------------TKMS  173 (271)
T ss_dssp             SSCCEEECCCCC--------------------------------------------------------------------
T ss_pred             cCcceEEccCCcccccccc---------------------------------------------------------cccC
Confidence             678999999998422110                                                         0012


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|+.||...........+.......+.   +...+..+.+|+.+|
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~  250 (271)
T 3dtc_A          174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI---PSTCPEPFAKLMEDC  250 (271)
T ss_dssp             --CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC---CTTCCHHHHHHHHHH
T ss_pred             CCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC---CcccCHHHHHHHHHH
Confidence            36899999999999988999999999999999999999999998887777776665443332   122344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcC
Q 013016          386 LNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |+.||.+||+    +.|+++|
T Consensus       251 l~~~p~~Rps----~~e~l~~  267 (271)
T 3dtc_A          251 WNPDPHSRPS----FTNILDQ  267 (271)
T ss_dssp             TCSSGGGSCC----HHHHHHH
T ss_pred             hcCCcccCcC----HHHHHHH
Confidence            9999999999    9999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-45  Score=356.76  Aligned_cols=258  Identities=22%  Similarity=0.320  Sum_probs=202.8

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..+++|.+.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.++++++||||+++++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~  101 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRER---------IVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHD  101 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCe---------EEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence            345899999999999999999999876655         49999998765544555677888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+..|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg  179 (309)
T 2h34_A          102 FGEIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFG  179 (309)
T ss_dssp             EEEETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred             EEeeCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCc
Confidence            999999999999999999999999865  459999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                      .........|++.|+|||
T Consensus       180 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE  205 (309)
T 2h34_A          180 IASATTDE------------------------------------------------------KLTQLGNTVGTLYYMAPE  205 (309)
T ss_dssp             C----------------------------------------------------------------------CCGGGCCGG
T ss_pred             cCcccccc------------------------------------------------------ccccccccCCCcCccCHH
Confidence            97432110                                                      000111236899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC-C
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL-G  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp-t  395 (451)
                      ++.+..++.++||||||+++|+|++|+.||......... ..+......+....+.. +.++.+||.+||+.||++|| +
T Consensus       206 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~dP~~Rp~s  283 (309)
T 2h34_A          206 RFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGI-PVAFDAVIARGMAKNPEDRYVT  283 (309)
T ss_dssp             GTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-HHHHSCCCCGGGTSTTC-CTHHHHHHHHHTCSSGGGSCSS
T ss_pred             HHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-HHhccCCCCccccCCCC-CHHHHHHHHHhccCCHHHHHHh
Confidence            999988999999999999999999999999886655433 33333332222222222 33899999999999999999 7


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          ++++++
T Consensus       284 ----~~~l~~  289 (309)
T 2h34_A          284 ----CGDLSA  289 (309)
T ss_dssp             ----HHHHHH
T ss_pred             ----HHHHHH
Confidence                777663

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=9.2e-46  Score=358.29  Aligned_cols=264  Identities=17%  Similarity=0.285  Sum_probs=211.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|.+.+.||+|+||.||+|.+.....    ...+..||||++.....  ....+.+.+|+.+++++ +||||++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~   93 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIK----SDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLL   93 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSS----TTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccc----cchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence            344789999999999999999998754211    12234699999975532  23346677899999999 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPH----------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      +++...+..++||||+++|+|.+++.....                ..+++..++.++.||+.||.|||++||+||||||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  173 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence            999999999999999999999999987542                2489999999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +|||++.++.+||+|||++........                                                     
T Consensus       174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------------------  200 (313)
T 1t46_A          174 RNILLTHGRITKICDFGLARDIKNDSN-----------------------------------------------------  200 (313)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTT-----------------------------------------------------
T ss_pred             ceEEEcCCCCEEEcccccccccccccc-----------------------------------------------------
Confidence            999999999999999999853221100                                                     


Q ss_pred             cccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHH
Q 013016          300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                      ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||........+............   +...+..+
T Consensus       201 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l  277 (313)
T 1t46_A          201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS---PEHAPAEM  277 (313)
T ss_dssp             SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC---CTTSCHHH
T ss_pred             ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCC---cccCCHHH
Confidence            001112367888999999999899999999999999999999 99999887665555544443322211   12234489


Q ss_pred             HHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          379 RDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      .+||.+||+.||.+|||    +.|++++
T Consensus       278 ~~li~~~l~~dp~~Rps----~~ell~~  301 (313)
T 1t46_A          278 YDIMKTCWDADPLKRPT----FKQIVQL  301 (313)
T ss_dssp             HHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHHcCCCchhCcC----HHHHHHH
Confidence            99999999999999999    9998863

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-46  Score=372.45  Aligned_cols=257  Identities=24%  Similarity=0.313  Sum_probs=211.1

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.++||+|+||.||+|.++.+++         .||||++....  .......+.+|+.++++++||||++++
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~---------~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~  178 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNT---------LVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLI  178 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEE
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCe---------EEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            4455789999999999999999999986554         49999997542  223345677899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+.+|+||||++||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       179 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~Df  257 (377)
T 3cbl_A          179 GVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF  257 (377)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCG
T ss_pred             EEEecCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcC
Confidence            9999999999999999999999998764 245899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.......                                                     .........++..|+||
T Consensus       258 G~s~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y~aP  284 (377)
T 3cbl_A          258 GMSREEADGV-----------------------------------------------------YAASGGLRQVPVKWTAP  284 (377)
T ss_dssp             GGCEECTTSE-----------------------------------------------------EECCSSCCEEEGGGSCH
T ss_pred             CCceecCCCc-----------------------------------------------------eeecCCCCCCCcCcCCH
Confidence            9984321100                                                     00000112356789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||++|||++ |..||......+....+..+.....    +...+..+.+||.+||+.||++||
T Consensus       285 E~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rp  360 (377)
T 3cbl_A          285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC----PELCPDAVFRLMEQCWAYEPGQRP  360 (377)
T ss_dssp             HHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCCchhCc
Confidence            99998889999999999999999998 9999999888777766665432111    122344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      |    +.+|++
T Consensus       361 s----~~~i~~  367 (377)
T 3cbl_A          361 S----FSTIYQ  367 (377)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    888874

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=9.9e-46  Score=361.18  Aligned_cols=258  Identities=16%  Similarity=0.192  Sum_probs=204.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.+..+++.     ....||+|.+....  .......+.+|+.++++++||||+++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   86 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGIC   86 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC---------CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCce-----EEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            36799999999999999999998765432     11236888886442  233456778899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++ .++|+||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        87 ~~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a  164 (327)
T 3poz_A           87 LTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             ESSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred             ecCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcce
Confidence            8765 789999999999999988753 45999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                     ........||..|+|||++
T Consensus       165 ~~~~~~~~-----------------------------------------------------~~~~~~~~~t~~y~aPE~~  191 (327)
T 3poz_A          165 KLLGAEEK-----------------------------------------------------EYHAEGGKVPIKWMALESI  191 (327)
T ss_dssp             HHHTTTCC------------------------------------------------------------CCCGGGSCHHHH
T ss_pred             eEccCCcc-----------------------------------------------------cccccCCCccccccChHHh
Confidence            54321100                                                     0011123568889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |+.||...........+..+.....    +...+.++.+|+.+||+.||.+||+  
T Consensus       192 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps--  265 (327)
T 3poz_A          192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----PPICTIDVYMIMVKCWMIDADSRPK--  265 (327)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC----CTTBCHHHHHHHHHHTCSCGGGSCC--
T ss_pred             ccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC----CccCCHHHHHHHHHHcCCChhhCCC--
Confidence            99999999999999999999999 9999998877776666655432211    1223448999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.+++++
T Consensus       266 --~~ell~~  272 (327)
T 3poz_A          266 --FRELIIE  272 (327)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHHH
Confidence              9999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.8e-45  Score=351.36  Aligned_cols=256  Identities=24%  Similarity=0.342  Sum_probs=201.9

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+.....      .+..||+|++....  .......+.+|+.++++++||||++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   84 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPEN------PALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGV   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--------CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCC------CceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEE
Confidence            34789999999999999999999865432      23359999987542  23345667789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +. .+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  162 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  162 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccc
Confidence            84 567899999999999999997653 4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                      ........|++.|+|||+
T Consensus       163 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~  188 (281)
T 1mp8_A          163 SRYMEDST------------------------------------------------------YYKASKGKLPIKWMAPES  188 (281)
T ss_dssp             ----------------------------------------------------------------------CCGGGCCHHH
T ss_pred             ccccCccc------------------------------------------------------ccccccCCCcccccChhh
Confidence            85322100                                                      000112256778999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|+|++ |..||......+....+..+.....   . ...+..+.+||.+||+.||++||+ 
T Consensus       189 ~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~---~-~~~~~~l~~li~~~l~~~p~~Rps-  263 (281)
T 1mp8_A          189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM---P-PNCPPTLYSLMTKCWAYDPSRRPR-  263 (281)
T ss_dssp             HHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC---C-TTCCHHHHHHHHHHTCSSGGGSCC-
T ss_pred             cccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCC---C-CCCCHHHHHHHHHHccCChhhCcC-
Confidence            998899999999999999999997 9999998888777777766542211   1 123448999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.|+++
T Consensus       264 ---~~~l~~  269 (281)
T 1mp8_A          264 ---FTELKA  269 (281)
T ss_dssp             ---HHHHHH
T ss_pred             ---HHHHHH
Confidence               998875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1e-45  Score=354.03  Aligned_cols=255  Identities=17%  Similarity=0.218  Sum_probs=203.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.+.||+|+||+||+|.++.+++.  ..-....||+|++....   ....+.+.+|+.++++++||||++++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDY--GQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGG--GCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             chhHeeeeeeeccCCCceEEEEEEeccccc--ccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            347899999999999999999998865420  00001249999997543   2334567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC--------
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH--------  229 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~--------  229 (451)
                      +...+..|+||||+.|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.        
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence            999999999999999999999998753 34899999999999999999999999999999999999998887        


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++....                                                           ......||
T Consensus       160 ~kl~Dfg~~~~~~-----------------------------------------------------------~~~~~~~~  180 (289)
T 4fvq_A          160 IKLSDPGISITVL-----------------------------------------------------------PKDILQER  180 (289)
T ss_dssp             EEECCCCSCTTTS-----------------------------------------------------------CHHHHHHT
T ss_pred             eeeccCccccccc-----------------------------------------------------------CccccCCc
Confidence            9999999973211                                                           00123678


Q ss_pred             CCccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          310 HEYVSPEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       310 ~~y~aPE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      +.|+|||++.+ ..++.++|||||||++|+|++|..|+...........+.......+.....     ++.+||.+||+.
T Consensus       181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~li~~~l~~  255 (289)
T 4fvq_A          181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAA-----ELANLINNCMDY  255 (289)
T ss_dssp             TTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSC-----TTHHHHHHHSCS
T ss_pred             CcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCH-----HHHHHHHHHcCC
Confidence            89999999987 668999999999999999999554444433333334444444444433322     789999999999


Q ss_pred             CcCCcCCCCCChHHHHcC
Q 013016          389 DPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+|||    +.++++|
T Consensus       256 dp~~Rps----~~~ll~~  269 (289)
T 4fvq_A          256 EPDHRPS----FRAIIRD  269 (289)
T ss_dssp             SGGGSCC----HHHHHHH
T ss_pred             ChhHCcC----HHHHHHH
Confidence            9999999    9999863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.4e-45  Score=354.07  Aligned_cols=258  Identities=27%  Similarity=0.388  Sum_probs=205.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.....||+|+||.||+|.+..+++         .||||++....   ......+.+|+.+++.++||||+++++++.
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   89 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQV---------RIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFS   89 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCC---------EEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCe---------EEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEE
Confidence            456666689999999999999877665         49999987542   233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-CCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-DGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg~  237 (451)
                      ..+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+|||++. ++.+||+|||+
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~  169 (295)
T 2clq_A           90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT  169 (295)
T ss_dssp             ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred             eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccc
Confidence            9999999999999999999988653 235779999999999999999999999999999999999997 89999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                       ........|++.|+|||+
T Consensus       170 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~  194 (295)
T 2clq_A          170 SKRLAGI-------------------------------------------------------NPCTETFTGTLQYMAPEI  194 (295)
T ss_dssp             CEESCC------------------------------------------------------------CCCCCCGGGCCHHH
T ss_pred             ccccCCC-------------------------------------------------------CCcccccCCCccccChhh
Confidence            8532110                                                       001113468999999999


Q ss_pred             ccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH--hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          318 ASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNI--VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       318 ~~~~~--~~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i--~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +.+..  ++.++|||||||++|+|++|+.||....... .....  .......+     ...+.++.+||.+||+.||++
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP-----ESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             HHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC-----TTSCHHHHHHHHHTTCSSTTT
T ss_pred             hcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccccc-----ccCCHHHHHHHHHHccCChhh
Confidence            97654  7899999999999999999999997644332 22221  12222222     223348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCC
Q 013016          393 RLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      ||+    +.++|+||||+...
T Consensus       270 Rps----~~~ll~~~~~~~~~  286 (295)
T 2clq_A          270 RAC----ANDLLVDEFLKVSS  286 (295)
T ss_dssp             SCC----HHHHHTSGGGCC--
T ss_pred             CCC----HHHHhcChhhhhcc
Confidence            999    99999999999743

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=9.9e-46  Score=350.26  Aligned_cols=252  Identities=17%  Similarity=0.290  Sum_probs=210.9

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .++.+++|.+.++||+|+||+||+|.+.+.           .||||++..... .......+.+|+.++++++||||+++
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-----------~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~   72 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQGN-----------DIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPV   72 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEETTE-----------EEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECE
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEECCe-----------eEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhhe
Confidence            345668999999999999999999998633           399999976532 22334567889999999999999999


Q ss_pred             eEEEEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccCCCE
Q 013016          155 YAEFEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       155 ~~~~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~  230 (451)
                      ++++...  +..++||||++||+|.+++.......+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+
T Consensus        73 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~  152 (271)
T 3kmu_A           73 LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA  152 (271)
T ss_dssp             EEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCE
T ss_pred             EEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcce
Confidence            9999877  78999999999999999998876557999999999999999999999999  9999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      +|+|||++....                                                            .....||+
T Consensus       153 ~l~~~~~~~~~~------------------------------------------------------------~~~~~~t~  172 (271)
T 3kmu_A          153 RISMADVKFSFQ------------------------------------------------------------SPGRMYAP  172 (271)
T ss_dssp             EEEGGGSCCTTS------------------------------------------------------------CTTCBSCG
T ss_pred             eEEeccceeeec------------------------------------------------------------ccCccCCc
Confidence            999998863211                                                            01236889


Q ss_pred             CccCcccccCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          311 EYVSPEVASGGSHGN---AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~---~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      .|+|||++.+..++.   ++|||||||++|+|++|+.||...........+.........   +...+.++.+||.+||+
T Consensus       173 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~  249 (271)
T 3kmu_A          173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI---PPGISPHVSKLMKICMN  249 (271)
T ss_dssp             GGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC---CTTCCHHHHHHHHHHTC
T ss_pred             cccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcC
Confidence            999999998765544   799999999999999999999998888777776655433221   12234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHc
Q 013016          388 KDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~  405 (451)
                      .||++|||    +.++++
T Consensus       250 ~~p~~Rps----~~~il~  263 (271)
T 3kmu_A          250 EDPAKRPK----FDMIVP  263 (271)
T ss_dssp             SSGGGSCC----HHHHHH
T ss_pred             CChhhCcC----HHHHHH
Confidence            99999999    999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.4e-46  Score=365.95  Aligned_cols=257  Identities=22%  Similarity=0.257  Sum_probs=202.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||+||+|.++.+.          .||||++....   ......+.+|+.+++.++||||+++++++.
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----------~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGA----------KVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCC----------EEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred             hccCccceeecCCCeeEEEEEECCCC----------EEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            78999999999999999999975432          49999987542   233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..+..++||||+++|+|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  185 (321)
T 2qkw_B          106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGI  185 (321)
T ss_dssp             CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred             CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence            9999999999999999999987643  23589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                     .........||+.|+|||+
T Consensus       186 ~~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~  212 (321)
T 2qkw_B          186 SKKGTELD-----------------------------------------------------QTHLSTVVKGTLGYIDPEY  212 (321)
T ss_dssp             CEECSSSS-----------------------------------------------------CCCCBCCCEEETTTCCHHH
T ss_pred             cccccccc-----------------------------------------------------ccccccccCCCccccCHHH
Confidence            85321110                                                     0011123468999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhcCCCCC--CCCC---CCCcChHHHHHHHHHh
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-------LRNIVKKPLTF--PTQS---PSSMSEYHARDLISGL  385 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~-------~~~i~~~~~~~--~~~~---~~~~~~~~~~~ll~~~  385 (451)
                      +.+..++.++|||||||++|+|++|+.||......+.       ......+....  ....   .....+..+.+++.+|
T Consensus       213 ~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  292 (321)
T 2qkw_B          213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC  292 (321)
T ss_dssp             HHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHH
Confidence            9888999999999999999999999999976433211       11111111110  0001   1111234788999999


Q ss_pred             cccCcCCcCCCCCChHHHHcC
Q 013016          386 LNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      |+.||++|||    +.|+++|
T Consensus       293 l~~dP~~Rps----~~ell~~  309 (321)
T 2qkw_B          293 LALSSEDRPS----MGDVLWK  309 (321)
T ss_dssp             TCSSGGGSCC----HHHHHHH
T ss_pred             cCCCcccCcC----HHHHHHH
Confidence            9999999999    9999865

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=356.90  Aligned_cols=267  Identities=19%  Similarity=0.294  Sum_probs=206.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||+|+||+||+|.+..+++         .||+|++...   .......+.+|+.++++++||||++++++
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~---------~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   75 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHRETGE---------VMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGV   75 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTCC---------EEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ChhHeeccceecCCCCEEEEEEEECCCCc---------EEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEE
Confidence            34789999999999999999999987665         4999988543   23445667789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+++..++||||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  154 (310)
T 3s95_A           76 LYKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL  154 (310)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTT
T ss_pred             EecCCeeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeeccc
Confidence            999999999999999999999998753 4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.............                                         ..............+||+.|+|||+
T Consensus       155 ~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~gt~~y~aPE~  193 (310)
T 3s95_A          155 ARLMVDEKTQPEGL-----------------------------------------RSLKKPDRKKRYTVVGNPYWMAPEM  193 (310)
T ss_dssp             CEECC-------------------------------------------------------------CCCCSCGGGCCHHH
T ss_pred             ceeccccccccccc-----------------------------------------ccccccccccccccCCCcceeCHHH
Confidence            86433211110000                                         0000001112224589999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-----TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      +.+..++.++|||||||++|+|++|..||.......     .........  .+..     .+..+.+|+.+||+.||++
T Consensus       194 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~l~~li~~~l~~dP~~  266 (310)
T 3s95_A          194 INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--CPPN-----CPPSFFPITVRCCDLDPEK  266 (310)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--CCTT-----CCTTHHHHHHHHTCSSGGG
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--CCCC-----CCHHHHHHHHHHccCChhh
Confidence            999999999999999999999999999987532211     111111111  1111     1227899999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCC
Q 013016          393 RLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||+    +.+|++  |++.
T Consensus       267 Rps----~~~l~~--~L~~  279 (310)
T 3s95_A          267 RPS----FVKLEH--WLET  279 (310)
T ss_dssp             SCC----HHHHHH--HHHH
T ss_pred             CcC----HHHHHH--HHHH
Confidence            999    999886  4444

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.8e-45  Score=352.22  Aligned_cols=253  Identities=21%  Similarity=0.289  Sum_probs=213.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.++||+|+||+||+|.++.++.         .||+|++....    ...+.+.+|+.++++++||||++++++
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~   77 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV   77 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTE---------EEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCE---------EEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34789999999999999999999987665         49999997542    234567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+||||+.|++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus        78 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~  157 (288)
T 3kfa_A           78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL  157 (288)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred             EccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcc
Confidence            99999999999999999999999887777799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +......                                                      .........||+.|+|||+
T Consensus       158 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE~  183 (288)
T 3kfa_A          158 SRLMTGD------------------------------------------------------TYTAHAGAKFPIKWTAPES  183 (288)
T ss_dssp             GGTSCSS------------------------------------------------------SSEEETTEEECGGGCCHHH
T ss_pred             ceeccCC------------------------------------------------------ccccccCCccccCcCChhh
Confidence            8532210                                                      0011112357788999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++||||||+++|+|++ |..||...........+........    +...+..+.+||.+||+.||.+||+ 
T Consensus       184 ~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps-  258 (288)
T 3kfa_A          184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER----PEGCPEKVYELMRACWQWNPSDRPS-  258 (288)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC-
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCC----CCCCCHHHHHHHHHHhCCChhhCcC-
Confidence            998899999999999999999999 9999998877777666655432211    1223448999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.++++
T Consensus       259 ---~~~~~~  264 (288)
T 3kfa_A          259 ---FAEIHQ  264 (288)
T ss_dssp             ---HHHHHH
T ss_pred             ---HHHHHH
Confidence               888875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=6e-46  Score=362.34  Aligned_cols=257  Identities=15%  Similarity=0.175  Sum_probs=205.8

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.+..+++.     ....||+|++....  .......+.+|+.+++.++||||+++++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   84 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGES-----IKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLC   84 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCS-----CCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCce-----EEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            47899999999999999999998765532     11237777775332  122334556689999999999999999988


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      . .+..++||||+.+|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        85 ~-~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  162 (325)
T 3kex_A           85 P-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA  162 (325)
T ss_dssp             C-BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred             c-CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcc
Confidence            6 56789999999999999998764 346899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .......                                                     .........|+..|+|||++
T Consensus       163 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y~aPE~~  189 (325)
T 3kex_A          163 DLLPPDD-----------------------------------------------------KQLLYSEAKTPIKWMALESI  189 (325)
T ss_dssp             GGSCCCT-----------------------------------------------------TCCC-----CCTTTSCHHHH
T ss_pred             cccCccc-----------------------------------------------------ccccccCCCCcccccChHHh
Confidence            5432110                                                     00111234678899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCC-CCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      .+..++.++|||||||++|+|++ |+.||......+....+..+... .+..     .+.++.+|+.+||+.||.+||+ 
T Consensus       190 ~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps-  263 (325)
T 3kex_A          190 HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI-----CTIDVYMVMVKCWMIDENIRPT-  263 (325)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTT-----BCTTTTHHHHHHTCSCTTTSCC-
T ss_pred             ccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCc-----CcHHHHHHHHHHcCCChhhCcC-
Confidence            98899999999999999999999 99999988777777777665332 2222     2227889999999999999999 


Q ss_pred             CCChHHHHcC
Q 013016          397 KRGAADVKTH  406 (451)
Q Consensus       397 ~~~~~ell~h  406 (451)
                         +.++++|
T Consensus       264 ---~~el~~~  270 (325)
T 3kex_A          264 ---FKELANE  270 (325)
T ss_dssp             ---HHHHHHH
T ss_pred             ---HHHHHHH
Confidence               9999876

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.2e-46  Score=360.96  Aligned_cols=254  Identities=23%  Similarity=0.259  Sum_probs=197.1

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||+||+|.+.+.           .||||++....    ........|+.++++++||||+++++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----------~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~   85 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLLNE-----------YVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIG   85 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEETTE-----------EEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             cchhhchhhheecccCceEEEEEEECCC-----------EEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcc
Confidence            3447899999999999999999987632           49999997542    22334455888999999999999999


Q ss_pred             EEEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeeccCCCCcE
Q 013016          157 EFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML----------GIIYRDLKPENV  222 (451)
Q Consensus       157 ~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~----------givH~Dlkp~NI  222 (451)
                      ++....    .+|+||||+++|+|.+++...   .+++..++.++.||+.||+|||+.          ||+||||||+||
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Ni  162 (322)
T 3soc_A           86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV  162 (322)
T ss_dssp             EEEEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGE
T ss_pred             eeccCCCCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhE
Confidence            998744    579999999999999999774   499999999999999999999999          999999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      |++.++.+||+|||++.......                                                     ....
T Consensus       163 ll~~~~~~kL~DFg~a~~~~~~~-----------------------------------------------------~~~~  189 (322)
T 3soc_A          163 LLKNNLTACIADFGLALKFEAGK-----------------------------------------------------SAGD  189 (322)
T ss_dssp             EECTTCCEEECCCTTCEEECTTS-----------------------------------------------------CCCC
T ss_pred             EECCCCeEEEccCCccccccccc-----------------------------------------------------Cccc
Confidence            99999999999999985332110                                                     0011


Q ss_pred             ccccccCCCccCcccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCh----------------HHHHHHHhcC
Q 013016          303 SCSFVGTHEYVSPEVASGG-----SHGNAVDWWAFGIFIYEMIYGRTPFAAPSN----------------ETTLRNIVKK  361 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~-----~~~~~~DIwSlG~il~elltg~~pf~~~~~----------------~~~~~~i~~~  361 (451)
                      .....||+.|+|||++.+.     .++.++|||||||++|+|++|+.||.+...                ......+...
T Consensus       190 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (322)
T 3soc_A          190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK  269 (322)
T ss_dssp             CTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS
T ss_pred             cccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcc
Confidence            1234799999999999873     356688999999999999999999975321                2222222222


Q ss_pred             CCCCC--CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          362 PLTFP--TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       362 ~~~~~--~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .....  ........+.++.+||.+||+.||++|||    +.||++
T Consensus       270 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~  311 (322)
T 3soc_A          270 KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS----AGCVGE  311 (322)
T ss_dssp             CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             cCCCCccccccccchHHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            22111  11111122335899999999999999999    888875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=4.1e-46  Score=363.60  Aligned_cols=264  Identities=23%  Similarity=0.290  Sum_probs=188.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHH-HHHHCCCCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK-ILKMLDHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~nIv~l~~  156 (451)
                      ..++|.+.+.||+|+||.||+|.++.+++         .||||++.....  ......+..|+. +++.++||||+++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~   88 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQ---------IMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYG   88 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTE---------EEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCC---------EEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeee
Confidence            34789999999999999999999886655         499999975422  122233444555 667789999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHK---QPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ++...+..++||||+. ++|.+++..   .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||
T Consensus        89 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl  167 (327)
T 3aln_A           89 ALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL  167 (327)
T ss_dssp             EEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEE
Confidence            9999999999999995 588777653   2346699999999999999999999998 9999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        .......||+.|
T Consensus       168 ~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y  191 (327)
T 3aln_A          168 CDFGISGQLVDS--------------------------------------------------------IAKTRDAGCRPY  191 (327)
T ss_dssp             CCCSSSCC------------------------------------------------------------------------
T ss_pred             ccCCCceecccc--------------------------------------------------------cccccCCCCccc
Confidence            999998432110                                                        001122689999


Q ss_pred             cCcccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCC-CCCCCCCCcChHHHHHHHHHhc
Q 013016          313 VSPEVA----SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       313 ~aPE~~----~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +|||++    .+..++.++|||||||++|+|++|+.||...... +.+..+..+... ++... ....+..+.+||.+||
T Consensus       192 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l  270 (327)
T 3aln_A          192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE-EREFSPSFINFVNLCL  270 (327)
T ss_dssp             --------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS-SCCCCHHHHHHHHHHT
T ss_pred             cCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc-cccCCHHHHHHHHHHh
Confidence            999998    4566899999999999999999999999875432 233333332221 12111 1234458999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +.||.+||+    +.+|++||||.+..+
T Consensus       271 ~~dp~~Rps----~~ell~hp~~~~~~~  294 (327)
T 3aln_A          271 TKDESKRPK----YKELLKHPFILMYEE  294 (327)
T ss_dssp             CSSGGGSCC----HHHHTTSHHHHHHHH
T ss_pred             hCChhhCcC----HHHHHhChHHHHhHh
Confidence            999999999    999999999987443

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.6e-45  Score=366.26  Aligned_cols=261  Identities=23%  Similarity=0.298  Sum_probs=202.6

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.+.||+|+||.||+|+++...+      .+..||||++....  .......+.+|+.++++++||||++++
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~------~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~  112 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSK------KEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLE  112 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTS------CBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCC------CceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            3445789999999999999999998763211      12249999997542  233456778899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+..|+||||++|++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       113 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  191 (373)
T 2qol_A          113 GVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF  191 (373)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEeeCCceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcC
Confidence            9999999999999999999999999764 346999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                    ........++..|+||
T Consensus       192 g~a~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~aP  219 (373)
T 2qol_A          192 GLGRVLEDDPEA----------------------------------------------------AYTTRGGKIPIRWTSP  219 (373)
T ss_dssp             --------------------------------------------------------------------------CTTSCH
T ss_pred             ccccccccCCcc----------------------------------------------------ceeccCCCcCCCccCh
Confidence            998533211000                                                    0000112457789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||++|||++ |+.||......+....+..+.....    +...+..+.+|+.+||+.||.+||
T Consensus       220 E~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~RP  295 (373)
T 2qol_A          220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP----PMDCPAALYQLMLDCWQKDRNNRP  295 (373)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC----CTTCBHHHHHHHHHHTCSSGGGSC
T ss_pred             hhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CccccHHHHHHHHHHhCcChhhCc
Confidence            99999899999999999999999998 9999999888887777765532211    112344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    +.+|++
T Consensus       296 s----~~~i~~  302 (373)
T 2qol_A          296 K----FEQIVS  302 (373)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    888775

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.2e-45  Score=357.65  Aligned_cols=265  Identities=17%  Similarity=0.273  Sum_probs=213.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +..++|.+.+.||+|+||+||+|.+....+  .....+..||||++....  .......+.+|+.+++++ +||||++++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~  107 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL  107 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCST--TCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccc--cccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence            344789999999999999999999864321  112233469999997653  233456677899999999 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPH--------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                      +++...+..|+||||+.+++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  187 (334)
T ss_dssp             EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence            999999999999999999999999986532              348999999999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++........                                                     ..
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~-----------------------------------------------------~~  214 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDY-----------------------------------------------------YK  214 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSS-----------------------------------------------------EE
T ss_pred             EEEcCCCCEEEcccccccccccccc-----------------------------------------------------cc
Confidence            9999999999999999853321100                                                     00


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......||+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...+.++.+
T Consensus       215 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~  290 (334)
T 2pvf_A          215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK----PANCTNELYM  290 (334)
T ss_dssp             CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC----CTTCCHHHHH
T ss_pred             ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCC----CccCCHHHHH
Confidence            1112357788999999988889999999999999999999 9999999888887777766542211    1223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+||+.||.+||+    +.|++++
T Consensus       291 li~~~l~~dp~~Rps----~~ell~~  312 (334)
T 2pvf_A          291 MMRDCWHAVPSQRPT----FKQLVED  312 (334)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHccCChhhCcC----HHHHHHH
Confidence            999999999999999    9998864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.4e-45  Score=360.55  Aligned_cols=262  Identities=16%  Similarity=0.263  Sum_probs=211.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~  156 (451)
                      ..++|.+.+.||+|+||.||+|.+...++.    .....||+|++....  .......+.+|+.+++.+ +||||+++++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  117 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKE----DAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLG  117 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSS----CCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcc----cchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            347899999999999999999998765432    122359999997653  223446677899999999 8999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQP------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll  224 (451)
                      ++...+..|+||||+++|+|.+++....            ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE
Confidence            9999999999999999999999987532            3458999999999999999999999999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||++......                                                     .......
T Consensus       198 ~~~~~~kl~Dfg~~~~~~~~-----------------------------------------------------~~~~~~~  224 (333)
T 2i1m_A          198 TNGHVAKIGDFGLARDIMND-----------------------------------------------------SNYIVKG  224 (333)
T ss_dssp             EGGGEEEBCCCGGGCCGGGC-----------------------------------------------------TTSEECS
T ss_pred             CCCCeEEECccccccccccc-----------------------------------------------------cceeecC
Confidence            99999999999998432110                                                     0001111


Q ss_pred             ccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      ...||+.|+|||++.+..++.++|||||||++|+|++ |..||........+..+.........   +...+..+.+||.
T Consensus       225 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~  301 (333)
T 2i1m_A          225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ---PAFAPKNIYSIMQ  301 (333)
T ss_dssp             SCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCC---CTTCCHHHHHHHH
T ss_pred             CCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCC---CCCCCHHHHHHHH
Confidence            2367888999999999899999999999999999998 99999887666555555443322211   1223448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.||.+||+    +.||++
T Consensus       302 ~~l~~~p~~Rps----~~~l~~  319 (333)
T 2i1m_A          302 ACWALEPTHRPT----FQQICS  319 (333)
T ss_dssp             HHTCSSGGGSCC----HHHHHH
T ss_pred             HHhccChhhCcC----HHHHHH
Confidence            999999999999    999886

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=5.4e-45  Score=349.51  Aligned_cols=256  Identities=22%  Similarity=0.343  Sum_probs=198.2

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.++||+|+||+||+|.+...            ||+|++..... .......+.+|+.++++++|+||++++++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~------------vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWHGD------------VAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY   88 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESSSE------------EEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEcCc------------eEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence            337899999999999999999986543            89999975432 23445677889999999999999999996


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      + ..+..++||||+.|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        89 ~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~  166 (289)
T 3og7_A           89 S-TAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGL  166 (289)
T ss_dssp             E-CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred             c-cCCccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEcccee
Confidence            5 556789999999999999988654 35699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                     .........||+.|+|||+
T Consensus       167 ~~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~  193 (289)
T 3og7_A          167 ATEKSRWS-----------------------------------------------------GSHQFEQLSGSILWMAPEV  193 (289)
T ss_dssp             ----------------------------------------------------------------------CCCTTCCHHH
T ss_pred             cccccccc-----------------------------------------------------ccccccccCCCccccCchh
Confidence            74221100                                                     0011123478999999999


Q ss_pred             cc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          318 AS---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI-VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       318 ~~---~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      +.   +..++.++|||||||++|+|++|+.||......+.+..+ ..+.............+..+.+||.+||+.||.+|
T Consensus       194 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  273 (289)
T 3og7_A          194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDER  273 (289)
T ss_dssp             HC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhC
Confidence            87   566889999999999999999999999886665544444 34433333222233345589999999999999999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      |+    +.++++
T Consensus       274 ps----~~ell~  281 (289)
T 3og7_A          274 PS----FPRILA  281 (289)
T ss_dssp             CC----HHHHHH
T ss_pred             CC----HHHHHH
Confidence            99    888875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.6e-45  Score=345.99  Aligned_cols=253  Identities=23%  Similarity=0.322  Sum_probs=211.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.+.||+|+||.||+|.+..+.          .||+|++......    .+.+.+|+.+++.++||||+++++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~   70 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYG   70 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTE----------EEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             EchhheeeeeEecCCCceeEEEEEecCCC----------eEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEE
Confidence            44578999999999999999999986443          3999999865322    245677999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++...+..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||
T Consensus        71 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg  149 (267)
T 3t9t_A           71 VCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG  149 (267)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTT
T ss_pred             EEccCCCeEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccc
Confidence            9999999999999999999999997753 458999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                      .........|+..|+|||
T Consensus       150 ~~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE  175 (267)
T 3t9t_A          150 MTRFVLDD------------------------------------------------------QYTSSTGTKFPVKWASPE  175 (267)
T ss_dssp             GGGGBCCH------------------------------------------------------HHHSTTSTTCCGGGCCHH
T ss_pred             cccccccc------------------------------------------------------cccccccccccccccChh
Confidence            97432100                                                      000011235778899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++||||||+++|+|++ |+.||......+....+..+.....    +...+..+.+|+.+||+.||.+||+
T Consensus       176 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps  251 (267)
T 3t9t_A          176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----PRLASTHVYQIMNHCWRERPEDRPA  251 (267)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC----CccCcHHHHHHHHHHccCChhhCcC
Confidence            9998889999999999999999999 9999999888888887776643221    1233448999999999999999999


Q ss_pred             CCCChHHHHcC
Q 013016          396 SKRGAADVKTH  406 (451)
Q Consensus       396 ~~~~~~ell~h  406 (451)
                          +.+++++
T Consensus       252 ----~~~ll~~  258 (267)
T 3t9t_A          252 ----FSRLLRQ  258 (267)
T ss_dssp             ----HHHHHHH
T ss_pred             ----HHHHHHH
Confidence                9998863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.6e-45  Score=359.42  Aligned_cols=265  Identities=18%  Similarity=0.254  Sum_probs=210.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.+.||+|+||.||+|.+.....    ...+..||||++....  .......+.+|+.++++++||||+++++++.
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPN----DPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSL  103 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC------------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCC----CCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence            789999999999999999998653211    1122359999996432  2233456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC---CCEE
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPH-----KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIM  231 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~---~~~k  231 (451)
                      ..+..|+||||++|++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+|
T Consensus       104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence            99999999999999999999987532     348999999999999999999999999999999999999944   4699


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.......                                                     .........||+.
T Consensus       184 l~Dfg~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~  210 (327)
T 2yfx_A          184 IGDFGMARDIYRAS-----------------------------------------------------YYRKGGCAMLPVK  210 (327)
T ss_dssp             ECCCHHHHHHHC-----------------------------------------------------------CCGGGSCGG
T ss_pred             ECcccccccccccc-----------------------------------------------------ccccCCCcCCCcc
Confidence            99999974221100                                                     0011123467889


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |+|||++.+..++.++|||||||++|+|++ |..||......+....+..+......    ...+..+.+||.+||+.||
T Consensus       211 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp  286 (327)
T 2yfx_A          211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP----KNCPGPVYRIMTQCWQHQP  286 (327)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSG
T ss_pred             eeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHhcCCh
Confidence            999999998899999999999999999998 99999988888777777665432221    2234489999999999999


Q ss_pred             CCcCCCCCChHHHHcCCCcCC
Q 013016          391 CNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      .+||+    +.+|++|.|+-.
T Consensus       287 ~~Rps----~~~ll~~l~~~~  303 (327)
T 2yfx_A          287 EDRPN----FAIILERIEYCT  303 (327)
T ss_dssp             GGSCC----HHHHHHHHHHHH
T ss_pred             hhCcC----HHHHHHHHHHHh
Confidence            99999    999999988655

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-44  Score=353.89  Aligned_cols=264  Identities=21%  Similarity=0.249  Sum_probs=209.9

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ..+..++|.+.+.||+|+||+||+|.++....     ..+..||||++....  .......+.+|+.++++++||||+++
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~  111 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG-----KKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRL  111 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC--------CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCC-----CccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            34455789999999999999999999875432     122359999997542  22334567789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++...+..++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus       112 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~D  190 (333)
T 1mqb_A          112 EGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD  190 (333)
T ss_dssp             EEEECSSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECC
T ss_pred             EEEEecCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECC
Confidence            99999999999999999999999998764 35699999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++.........                                                    ........||..|+|
T Consensus       191 fg~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~a  218 (333)
T 1mqb_A          191 FGLSRVLEDDPEA----------------------------------------------------TYTTSGGKIPIRWTA  218 (333)
T ss_dssp             CCC---------------------------------------------------------------------CCCGGGSC
T ss_pred             CCcchhhcccccc----------------------------------------------------ccccCCCCccccccC
Confidence            9998532211000                                                    000111246778999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+..++.++|||||||++|+|++ |+.||......+....+..+.....    +...+..+.+||.+||+.||.+|
T Consensus       219 PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R  294 (333)
T 1mqb_A          219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT----PMDCPSAIYQLMMQCWQQERARR  294 (333)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC----CTTCBHHHHHHHHHHTCSSTTTS
T ss_pred             chhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC----cccCCHHHHHHHHHHcCCChhhC
Confidence            999999899999999999999999999 9999998888887777766532111    12234489999999999999999


Q ss_pred             CCCCCChHHHHcC
Q 013016          394 LGSKRGAADVKTH  406 (451)
Q Consensus       394 pt~~~~~~ell~h  406 (451)
                      |+    +.+++++
T Consensus       295 ps----~~~l~~~  303 (333)
T 1mqb_A          295 PK----FADIVSI  303 (333)
T ss_dssp             CC----HHHHHHH
T ss_pred             cC----HHHHHHH
Confidence            99    8888763

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=7e-45  Score=370.50  Aligned_cols=248  Identities=21%  Similarity=0.311  Sum_probs=209.3

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      +.+..++|++.++||+|+||.||+|.+++.           .||||++....     ..+.+.+|+.++++++||||+++
T Consensus       188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~-----------~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~  251 (450)
T 1k9a_A          188 WALNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQL  251 (450)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEETTE-----------EEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cccChHHeEEEeeecCcCCeeEEEEEecCC-----------eEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEE
Confidence            455668899999999999999999988643           39999997542     34567789999999999999999


Q ss_pred             eEEEEeCC-eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          155 YAEFEASN-FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       155 ~~~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ++++...+ .+|+||||+++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       252 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  331 (450)
T 1k9a_A          252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS  331 (450)
T ss_dssp             EEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEe
Confidence            99987665 79999999999999999987655568999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++......                                                          .....++..|+
T Consensus       332 DfG~a~~~~~~----------------------------------------------------------~~~~~~~~~y~  353 (450)
T 1k9a_A          332 DFGLTKEASST----------------------------------------------------------QDTGKLPVKWT  353 (450)
T ss_dssp             CCTTCEECC----------------------------------------------------------------CCCTTTS
T ss_pred             eCCCccccccc----------------------------------------------------------ccCCCCCccee
Confidence            99998421100                                                          00125678899


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      |||++.+..++.++|||||||+||||++ |+.||......+....+..+.. ..+     ...+..+.+||.+||+.||.
T Consensus       354 aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p-----~~~~~~l~~li~~cl~~dp~  428 (450)
T 1k9a_A          354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-----DGCPPAVYDVMKNCWHLDAA  428 (450)
T ss_dssp             CHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCC-----TTCCHHHHHHHHHHTCSSGG
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-----CcCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999999999998 9999998877777777766532 222     22344899999999999999


Q ss_pred             CcCCCCCChHHHHc
Q 013016          392 NRLGSKRGAADVKT  405 (451)
Q Consensus       392 ~Rpt~~~~~~ell~  405 (451)
                      +|||    +.+|++
T Consensus       429 ~Rpt----~~~l~~  438 (450)
T 1k9a_A          429 TRPT----FLQLRE  438 (450)
T ss_dssp             GSCC----HHHHHH
T ss_pred             HCcC----HHHHHH
Confidence            9999    888864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=7.9e-46  Score=360.77  Aligned_cols=253  Identities=24%  Similarity=0.376  Sum_probs=207.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCC--CCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLD--HPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~nIv~l  154 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++........   .....+..|+.+++++.  |+||+++
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNL---------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTE---------EEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCc---------EEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            789999999999999999999877665         499999976532211   11234456899999996  5999999


Q ss_pred             eEEEEeCCeEEEEEeeccC-CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc-cCCCEEE
Q 013016          155 YAEFEASNFSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHIML  232 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~-~~~~~kl  232 (451)
                      ++++...+..++|||++.+ ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL  191 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL  191 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEE
Confidence            9999999999999999976 8999998764  5599999999999999999999999999999999999999 7899999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                         ......||+.|
T Consensus       192 ~Dfg~~~~~~~~---------------------------------------------------------~~~~~~gt~~y  214 (320)
T 3a99_A          192 IDFGSGALLKDT---------------------------------------------------------VYTDFDGTRVY  214 (320)
T ss_dssp             CCCTTCEECCSS---------------------------------------------------------CBCCCCSCGGG
T ss_pred             eeCccccccccc---------------------------------------------------------cccCCCCCccC
Confidence            999998532210                                                         01123689999


Q ss_pred             cCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      +|||++.+..+ +.++|||||||++|+|++|+.||....      .+......++.     ..+.++.+||.+||+.||.
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~  283 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQ-----RVSSECQHLIRWCLALRPS  283 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCSS-----CCCHHHHHHHHHHTCSSGG
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccccc-----cCCHHHHHHHHHHccCChh
Confidence            99999987665 688999999999999999999997531      22333333222     2334899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCCCcc
Q 013016          392 NRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      +||+    +.||++||||+++-.+
T Consensus       284 ~Rps----~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          284 DRPT----FEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             GSCC----HHHHHTSGGGSSCCCH
T ss_pred             hCcC----HHHHhcCHhhcCccCc
Confidence            9999    9999999999996554

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.1e-45  Score=352.60  Aligned_cols=259  Identities=27%  Similarity=0.416  Sum_probs=205.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC--CCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD--HPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~nIv~l~~~  157 (451)
                      ++|.+.+.||+|+||.||+|.+..+.          .||||++..... .......+.+|+.+++++.  |+||++++++
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----------~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQ----------IYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCC----------EEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCc----------EEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            67999999999999999999876432          499999965432 2334566778999999997  5999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..|+|||+ .+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+
T Consensus        97 ~~~~~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~  172 (313)
T 3cek_A           97 EITDQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI  172 (313)
T ss_dssp             EECSSEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred             eecCCEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccc
Confidence            9999999999994 589999999875  4689999999999999999999999999999999999996 58999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                     .........||+.|+|||+
T Consensus       173 ~~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~  199 (313)
T 3cek_A          173 ANQMQPDT-----------------------------------------------------TSVVKDSQVGTVNYMPPEA  199 (313)
T ss_dssp             SCC-------------------------------------------------------------------CCGGGCCHHH
T ss_pred             cccccCcc-----------------------------------------------------ccccccCCCCCCCcCCHHH
Confidence            85321100                                                     0001113478999999999


Q ss_pred             ccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          318 ASG-----------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       318 ~~~-----------~~~~~~~DIwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +.+           ..++.++|||||||++|+|++|+.||..... ...+..+.........   +...+.++.+||.+|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~  276 (313)
T 3cek_A          200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF---PDIPEKDLQDVLKCC  276 (313)
T ss_dssp             HTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCC---CCCSCHHHHHHHHHH
T ss_pred             HhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCC---cccchHHHHHHHHHH
Confidence            876           4678899999999999999999999987543 3444555443322211   122344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          386 LNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                      |+.||.+||+    +.|+++||||+...
T Consensus       277 l~~dp~~Rps----~~ell~h~~~~~~~  300 (313)
T 3cek_A          277 LKRDPKQRIS----IPELLAHPYVQIQT  300 (313)
T ss_dssp             TCSSTTTSCC----HHHHHTSHHHHCC-
T ss_pred             ccCCcccCcC----HHHHhcCccccCCC
Confidence            9999999999    99999999999843

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.1e-44  Score=345.85  Aligned_cols=260  Identities=23%  Similarity=0.318  Sum_probs=209.3

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      .++..++|.+.+.||+|+||+||+|.+.....      .+..||+|++....  .......+.+|+.+++.++||||+++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~   78 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKG------EKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKL   78 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTC------CEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCC------CcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceE
Confidence            44555889999999999999999998765431      12359999998652  22344667789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++.+ +..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        79 ~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  156 (281)
T 3cc6_A           79 IGIIEE-EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGD  156 (281)
T ss_dssp             EEEECS-SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECC
T ss_pred             EEEEcC-CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCc
Confidence            999875 45689999999999999987643 4589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++.......                                                      ........|++.|+|
T Consensus       157 fg~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~a  182 (281)
T 3cc6_A          157 FGLSRYIEDED------------------------------------------------------YYKASVTRLPIKWMS  182 (281)
T ss_dssp             CCGGGCC---------------------------------------------------------------CCCCCGGGCC
T ss_pred             cCCCccccccc------------------------------------------------------ccccccCCCCcceeC
Confidence            99985322100                                                      000112356788999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+..++.++|||||||++|+|++ |+.||...........+........    +...+..+.+||.+||+.||.+|
T Consensus       183 PE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R  258 (281)
T 3cc6_A          183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK----PDLCPPVLYTLMTRCWDYDPSDR  258 (281)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             chhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHccCCchhC
Confidence            999998889999999999999999998 9999988777766666655432211    12234489999999999999999


Q ss_pred             CCCCCChHHHHcC
Q 013016          394 LGSKRGAADVKTH  406 (451)
Q Consensus       394 pt~~~~~~ell~h  406 (451)
                      |+    +.|++++
T Consensus       259 ps----~~ell~~  267 (281)
T 3cc6_A          259 PR----FTELVCS  267 (281)
T ss_dssp             CC----HHHHHHH
T ss_pred             cC----HHHHHHH
Confidence            99    9998864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.3e-45  Score=359.67  Aligned_cols=272  Identities=21%  Similarity=0.261  Sum_probs=209.9

Q ss_pred             CchhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHH
Q 013016           59 SDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM  138 (451)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~  138 (451)
                      ..++..++....         ++|.+.+.||+|+||+||+|.+..+.          .||||++......  .....+.+
T Consensus        18 ~~~~~~~~~~~~---------~~y~~~~~lg~G~~g~V~~~~~~~~~----------~vavK~~~~~~~~--~~~~~~~~   76 (326)
T 3uim_A           18 KRFSLRELQVAS---------DNFSNKNILGRGGFGKVYKGRLADGT----------LVAVKRLKEERTQ--GGELQFQT   76 (326)
T ss_dssp             EECCTHHHHTTT---------TSSCSTTEEECCSSSEEEEECCSSSC----------CEEEEECCC-------CCCHHHH
T ss_pred             ceecHHHHHHHh---------hccccceeEecCCCcEEEEEEecCCC----------EEEEEEeccccCc--hHHHHHHH
Confidence            346667777666         89999999999999999999765332          3999999865322  22335778


Q ss_pred             HHHHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCe
Q 013016          139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP--HKRFSLTSARFYAAEVLVALEYLHML---GII  213 (451)
Q Consensus       139 e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---giv  213 (451)
                      |+.+++.++||||+++++++...+..++||||+.+|+|.+++....  ...+++..++.++.||+.||+|||++   ||+
T Consensus        77 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv  156 (326)
T 3uim_A           77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII  156 (326)
T ss_dssp             HHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEE
T ss_pred             HHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence            9999999999999999999999999999999999999999998653  23499999999999999999999999   999


Q ss_pred             eccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcc
Q 013016          214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL  293 (451)
Q Consensus       214 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (451)
                      ||||||+|||++.++.+||+|||++......                                                 
T Consensus       157 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------  187 (326)
T 3uim_A          157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYK-------------------------------------------------  187 (326)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCSSCEECCSS-------------------------------------------------
T ss_pred             eCCCchhhEEECCCCCEEeccCccccccCcc-------------------------------------------------
Confidence            9999999999999999999999998532211                                                 


Q ss_pred             cccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC----CChHHHHHHHhcCCCCC---C
Q 013016          294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTF---P  366 (451)
Q Consensus       294 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~----~~~~~~~~~i~~~~~~~---~  366 (451)
                           .........||+.|+|||++.+..++.++|||||||++|+|++|+.||..    .........+.......   .
T Consensus       188 -----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (326)
T 3uim_A          188 -----DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE  262 (326)
T ss_dssp             -----SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCST
T ss_pred             -----cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhh
Confidence                 01111234699999999999888899999999999999999999999962    11111122222211110   0


Q ss_pred             C----C---CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCc
Q 013016          367 T----Q---SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       367 ~----~---~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~  409 (451)
                      .    .   .........+.+|+.+||+.||.+|||    +.||++|-+-
T Consensus       263 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~L~~  308 (326)
T 3uim_A          263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK----MSEVVRMLEG  308 (326)
T ss_dssp             TSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCC----HHHHHHHHHT
T ss_pred             hhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCC----HHHHHHHhcC
Confidence            0    0   001112247899999999999999999    9999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=357.40  Aligned_cols=252  Identities=24%  Similarity=0.363  Sum_probs=198.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHC----CCCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKML----DHPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~nIv  152 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++........   .....+..|+.++.++    +|+||+
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~  101 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRL---------QVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVI  101 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCC---------EEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBC
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCe---------EEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCee
Confidence            779999999999999999999876655         499999975432211   1223345688899888    899999


Q ss_pred             ceeEEEEeCCeEEEEEee-ccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc-cCCCE
Q 013016          153 TLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHI  230 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~-~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~-~~~~~  230 (451)
                      ++++++...+..++|||+ +.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus       102 ~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          102 RLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             CEEEEC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEE
T ss_pred             eEEEEEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeE
Confidence            999999999999999999 7899999999874  4599999999999999999999999999999999999999 88999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++......                                                         ......|+.
T Consensus       180 kl~dfg~~~~~~~~---------------------------------------------------------~~~~~~~~~  202 (312)
T 2iwi_A          180 KLIDFGSGALLHDE---------------------------------------------------------PYTDFDGTR  202 (312)
T ss_dssp             EECCCSSCEECCSS---------------------------------------------------------CBCCCCSCT
T ss_pred             EEEEcchhhhcccC---------------------------------------------------------cccccCCcc
Confidence            99999998532210                                                         011236899


Q ss_pred             CccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          311 EYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       311 ~y~aPE~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      .|+|||++.+..+ +.++|||||||++|+|++|+.||...  .    .+......++.     ..+.++.+||.+||+.|
T Consensus       203 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~----~~~~~~~~~~~-----~~~~~~~~li~~~l~~~  271 (312)
T 2iwi_A          203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--Q----EILEAELHFPA-----HVSPDCCALIRRCLAPK  271 (312)
T ss_dssp             TTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--H----HHHHTCCCCCT-----TSCHHHHHHHHHHTCSS
T ss_pred             cccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh--H----HHhhhccCCcc-----cCCHHHHHHHHHHccCC
Confidence            9999999987666 45899999999999999999999753  1    22333333332     23348999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          390 PCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      |++||+    +.|+++||||++...
T Consensus       272 p~~Rps----~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          272 PSSRPS----LEEILLDPWMQTPAE  292 (312)
T ss_dssp             TTTSCC----HHHHHHSTTTCC---
T ss_pred             hhhCcC----HHHHhcChhhcCchh
Confidence            999999    999999999998544

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.3e-44  Score=350.07  Aligned_cols=256  Identities=26%  Similarity=0.354  Sum_probs=199.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|++.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.++++++|+||+++++++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~  101 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGV---------PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF  101 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCC---------EEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCc---------eEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3789999999999999999999876655         4999999754333344556777899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ...+..++||||+.+++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg  181 (310)
T 2wqm_A          102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG  181 (310)
T ss_dssp             EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred             EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecc
Confidence            9999999999999999999988652  24568999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                       ........|++.|+|||
T Consensus       182 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE  206 (310)
T 2wqm_A          182 LGRFFSSK-------------------------------------------------------TTAAHSLVGTPYYMSPE  206 (310)
T ss_dssp             ------------------------------------------------------------------------CCSSCCHH
T ss_pred             ceeeecCC-------------------------------------------------------CccccccCCCeeEeChH
Confidence            97432110                                                       00111246899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS--NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ++.+..++.++|||||||++|+|++|+.||....  .......+......  ... ....+.++.+||.+||+.||.+||
T Consensus       207 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~li~~~l~~dp~~Rp  283 (310)
T 2wqm_A          207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLP-SDHYSEELRQLVNMCINPDPEKRP  283 (310)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCC-TTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCc-ccccCHHHHHHHHHHcCCChhhCC
Confidence            9999899999999999999999999999997643  23444444443322  111 123344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    +.++++
T Consensus       284 s----~~~il~  290 (310)
T 2wqm_A          284 D----VTYVYD  290 (310)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    999885

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.2e-45  Score=349.52  Aligned_cols=259  Identities=18%  Similarity=0.235  Sum_probs=205.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|.+.+.||+|+||.||+|.+..+++         .||||++....     ....+.+|+.+++.+ +|+||++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~   74 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQ---------QVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYF   74 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTE---------EEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCc---------EEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEee
Confidence            3779999999999999999999876655         49999986432     224466799999999 79999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC-----EEE
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH-----IML  232 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~-----~kl  232 (451)
                      +......|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.     +||
T Consensus        75 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl  152 (298)
T 1csn_A           75 GQEGLHNVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYV  152 (298)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred             cCCCceeEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEE
Confidence            99999999999999 999999998753 45999999999999999999999999999999999999987776     999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++...........                                                ..........||+.|
T Consensus       153 ~Dfg~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~y  184 (298)
T 1csn_A          153 VDFGMVKFYRDPVTKQH------------------------------------------------IPYREKKNLSGTARY  184 (298)
T ss_dssp             CCCTTCEESBCTTTCCB------------------------------------------------CCCCCCCCCCSCTTT
T ss_pred             EECcccccccccccccc------------------------------------------------ccccCccCCCCCccc
Confidence            99999864332111000                                                000112245799999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP---SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      +|||++.+..++.++|||||||++|+|++|+.||...   .....+..+.......+........+.++.+|+.+||+.|
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  264 (298)
T 1csn_A          185 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLA  264 (298)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCC
T ss_pred             CCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999874   3344444443332211111111123348999999999999


Q ss_pred             cCCcCCCCCChHHHHc
Q 013016          390 PCNRLGSKRGAADVKT  405 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~  405 (451)
                      |++||+    +.+|++
T Consensus       265 p~~RP~----~~~l~~  276 (298)
T 1csn_A          265 FDATPD----YDYLQG  276 (298)
T ss_dssp             TTCCCC----HHHHHH
T ss_pred             cccCCC----HHHHHH
Confidence            999999    888764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=5.7e-45  Score=355.55  Aligned_cols=257  Identities=20%  Similarity=0.292  Sum_probs=209.6

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +.+++|.+.+.||+|+||.||+|.++.++..       ..+|+|++....  .......+.+|+.+++++ +||||++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-------~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~   92 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLL   92 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEE-------EEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcc-------cceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhc
Confidence            4458899999999999999999998876542       125999987532  233456678899999999 899999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                      +++...+..|+||||+++++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A           93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             EEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            99999999999999999999999987643              3469999999999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++.....                                                        ..
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~--------------------------------------------------------~~  196 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEV--------------------------------------------------------YV  196 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCE--------------------------------------------------------EC
T ss_pred             EEEcCCCeEEEcccCcCccccc--------------------------------------------------------cc
Confidence            9999999999999999742110                                                        00


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+..+.....    +...+.++.+
T Consensus       197 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~  272 (327)
T 1fvr_A          197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK----PLNCDDEVYD  272 (327)
T ss_dssp             CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCC----CTTBCHHHHH
T ss_pred             cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCC----CCCCCHHHHH
Confidence            0112256788999999988889999999999999999998 9999999888887777766532111    1223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+||+.||.+||+    +.+++++
T Consensus       273 li~~~l~~dp~~Rps----~~ell~~  294 (327)
T 1fvr_A          273 LMRQCWREKPYERPS----FAQILVS  294 (327)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHccCChhhCcC----HHHHHHH
Confidence            999999999999999    9999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.2e-45  Score=377.22  Aligned_cols=255  Identities=20%  Similarity=0.287  Sum_probs=213.0

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+...+|.+.++||+|+||.||+|.++....         .||||++....    ...+.+.+|+.++++++||||++++
T Consensus       216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~---------~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~  282 (495)
T 1opk_A          216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLL  282 (495)
T ss_dssp             BCCGGGEEEEEESGGGTTSSEEEEEEGGGTE---------EEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccCHHHceeeeEecCCCCeEEEEEEEcCCCe---------EEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEE
Confidence            3445789999999999999999999987554         49999997542    2345677899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+.+||||||+++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       283 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  362 (495)
T 1opk_A          283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF  362 (495)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCT
T ss_pred             EEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeec
Confidence            99999999999999999999999998876677999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.......                                                      ........++..|+||
T Consensus       363 G~a~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aP  388 (495)
T 1opk_A          363 GLSRLMTGDT------------------------------------------------------YTAHAGAKFPIKWTAP  388 (495)
T ss_dssp             TCEECCTTCC------------------------------------------------------EECCTTCCCCGGGCCH
T ss_pred             ccceeccCCc------------------------------------------------------eeecCCCcCCcceeCH
Confidence            9985322100                                                      0001122467789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||+||||++ |..||.+....+....+..+....   . +...+.++.+||.+||+.||.+||
T Consensus       389 E~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~l~~li~~cl~~dP~~RP  464 (495)
T 1opk_A          389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME---R-PEGCPEKVYELMRACWQWNPSDRP  464 (495)
T ss_dssp             HHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC---C-CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---C-CCCCCHHHHHHHHHHcCcChhHCc
Confidence            99998889999999999999999999 999999888777766665543211   1 122344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      +    +.+|++
T Consensus       465 s----~~el~~  471 (495)
T 1opk_A          465 S----FAEIHQ  471 (495)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    888875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=5.5e-45  Score=350.30  Aligned_cols=259  Identities=19%  Similarity=0.281  Sum_probs=199.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.++||+|+||+||+|++.....     ..+..||||++....   ......+.+|+.++++++||||++++++
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   79 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQD-----NTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGV   79 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCS-----SCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccC-----CCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34789999999999999999998542211     123369999997542   3344667789999999999999999999


Q ss_pred             EEeC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEAS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +...  .++++||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Df  158 (295)
T 3ugc_A           80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF  158 (295)
T ss_dssp             ECHHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred             EecCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccC
Confidence            8653  56899999999999999998753 35999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    .........|+..|+||
T Consensus       159 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aP  186 (295)
T 3ugc_A          159 GLTKVLPQDKE----------------------------------------------------FFKVKEPGESPIFWYAP  186 (295)
T ss_dssp             CSCC-----------------------------------------------------------------CTTCGGGGCCH
T ss_pred             cccccccCCcc----------------------------------------------------eeeeccCCCCccceeCc
Confidence            99853321100                                                    00011122567789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH----------------HHHHHHhcCCCCCCCCCCCCcChHHHH
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----------------TTLRNIVKKPLTFPTQSPSSMSEYHAR  379 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~~~~~~~  379 (451)
                      |++.+..++.++|||||||++|+|++|..||......                .....+... ...+.   +...+.++.
T Consensus       187 E~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~l~  262 (295)
T 3ugc_A          187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-GRLPR---PDGCPDEIY  262 (295)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT-CCCCC---CTTCCHHHH
T ss_pred             HHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc-CcCCC---CcCcCHHHH
Confidence            9999999999999999999999999999998753221                112222222 11111   222344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||.+||+.||++|||    +.||++
T Consensus       263 ~li~~~l~~dp~~Rps----~~el~~  284 (295)
T 3ugc_A          263 MIMTECWNNNVNQRPS----FRDLAL  284 (295)
T ss_dssp             HHHHHHSCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHcCCChhhCCC----HHHHHH
Confidence            9999999999999999    888875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=7.6e-45  Score=352.62  Aligned_cols=262  Identities=21%  Similarity=0.293  Sum_probs=196.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..+++|++.+.||+|+||.||+|.++.+++         .||||++...... ......+..+..+++.++||||+++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~   91 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFRKTGH---------VIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFG   91 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEETTTCC---------EEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhhccccccceeeecCCeeEEEEEEecCCe---------EEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEE
Confidence            345889999999999999999999986655         4999999765322 222233344555678889999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEEccCCCEEEecc
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML-GIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++...+..|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+||
T Consensus        92 ~~~~~~~~~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~df  169 (318)
T 2dyl_A           92 TFITNTDVFIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF  169 (318)
T ss_dssp             EEECSSEEEEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEecCCcEEEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEEC
Confidence            999999999999999 66666655443 35699999999999999999999995 9999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                        .......||+.|+||
T Consensus       170 g~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  193 (318)
T 2dyl_A          170 GISGRLVDD--------------------------------------------------------KAKDRSAGCAAYMAP  193 (318)
T ss_dssp             TTC----------------------------------------------------------------------CCTTCCH
T ss_pred             CCchhccCC--------------------------------------------------------ccccccCCCccccCh
Confidence            997422110                                                        001123689999999


Q ss_pred             cccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          316 EVAS-----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       316 E~~~-----~~~~~~~~DIwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |++.     +..++.++|||||||++|+|++|+.||... ...+.+..+..........  ....+.++.+||.+||+.|
T Consensus       194 E~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~d  271 (318)
T 2dyl_A          194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG--HMGFSGDFQSFVKDCLTKD  271 (318)
T ss_dssp             HHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS--SSCCCHHHHHHHHHHTCSC
T ss_pred             hhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCc--cCCCCHHHHHHHHHHccCC
Confidence            9995     456789999999999999999999999874 4455666666654322211  1123448999999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCCC
Q 013016          390 PCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      |.+||+    +.+|++||||++.
T Consensus       272 p~~Rps----~~~ll~h~~~~~~  290 (318)
T 2dyl_A          272 HRKRPK----YNKLLEHSFIKRY  290 (318)
T ss_dssp             TTTSCC----HHHHTTSHHHHHH
T ss_pred             hhHCcC----HHHHhhCHHHHhc
Confidence            999999    9999999999873

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-44  Score=346.12  Aligned_cols=258  Identities=19%  Similarity=0.258  Sum_probs=208.5

Q ss_pred             ccCCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           78 TFRDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..++|.+.+ .||+|+||.||+|.+.....       +..||||++....  .......+.+|+.+++.++||||+++++
T Consensus         7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~-------~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~   77 (287)
T 1u59_A            7 KRDNLLIADIELGCGNFGSVRQGVYRMRKK-------QIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIG   77 (287)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---C-------CEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cHHHhhhhhccccccCceeEEEeEeccCCC-------cceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence            346788877 99999999999998753221       2259999997642  2344567788999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++ ..+..++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        78 ~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg  155 (287)
T 1u59_A           78 VC-QAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG  155 (287)
T ss_dssp             EE-ESSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             Ee-cCCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccc
Confidence            99 556799999999999999998654 3559999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++........                                                    .........||+.|+|||
T Consensus       156 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE  183 (287)
T 1u59_A          156 LSKALGADDS----------------------------------------------------YYTARSAGKWPLKWYAPE  183 (287)
T ss_dssp             TCEECTTCSC----------------------------------------------------EECCCCSSCCCGGGCCHH
T ss_pred             ceeeeccCcc----------------------------------------------------eeeccccccccccccCHH
Confidence            9853321100                                                    000111235788999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++|||||||++|+|++ |+.||......+....+..+.....    +...+.++.+||.+||+.||.+||+
T Consensus       184 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps  259 (287)
T 1u59_A          184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC----PPECPPELYALMSDCWIYKWEDRPD  259 (287)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCC----CCCcCHHHHHHHHHHcCCChhhCcC
Confidence            9988889999999999999999998 9999999888887777766542211    1223448999999999999999999


Q ss_pred             CCCChHHHHcC
Q 013016          396 SKRGAADVKTH  406 (451)
Q Consensus       396 ~~~~~~ell~h  406 (451)
                          +.++++|
T Consensus       260 ----~~~l~~~  266 (287)
T 1u59_A          260 ----FLTVEQR  266 (287)
T ss_dssp             ----HHHHHHH
T ss_pred             ----HHHHHHH
Confidence                9999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.7e-45  Score=373.01  Aligned_cols=253  Identities=21%  Similarity=0.304  Sum_probs=209.5

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.++||+|+||+||+|.++.+.          .||||++....    ...+.+.+|+.++++++||||++++
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~----------~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~  249 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHT----------KVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLH  249 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTE----------EEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCcc----------EEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEE
Confidence            344578999999999999999999987543          39999997542    2345677899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++. .+.+|+||||+.+|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       250 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DF  328 (454)
T 1qcf_A          250 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF  328 (454)
T ss_dssp             EEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECST
T ss_pred             EEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeC
Confidence            9986 667899999999999999997654446899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++......                                                      .........++..|+||
T Consensus       329 G~a~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aP  354 (454)
T 1qcf_A          329 GLARVIEDN------------------------------------------------------EYTAREGAKFPIKWTAP  354 (454)
T ss_dssp             TGGGGBCCH------------------------------------------------------HHHTTCSSSSCGGGSCH
T ss_pred             CCceEcCCC------------------------------------------------------ceeccCCCcccccccCH
Confidence            998532110                                                      00000112467789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.+..++.++|||||||+||||++ |+.||.+....+....+..+.....    +...+.++.+||.+||+.||++||
T Consensus       355 E~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~RP  430 (454)
T 1qcf_A          355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR----PENCPEELYNIMMRCWKNRPEERP  430 (454)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHccCChhHCc
Confidence            99998899999999999999999999 9999999888888877776532211    122344899999999999999999


Q ss_pred             CCCCChHHHHc
Q 013016          395 GSKRGAADVKT  405 (451)
Q Consensus       395 t~~~~~~ell~  405 (451)
                      |    +.+|++
T Consensus       431 t----~~~i~~  437 (454)
T 1qcf_A          431 T----FEYIQS  437 (454)
T ss_dssp             C----HHHHHH
T ss_pred             C----HHHHHH
Confidence            9    888864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5.2e-45  Score=353.45  Aligned_cols=259  Identities=19%  Similarity=0.306  Sum_probs=207.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      ++|.+.+.||+|+||+||+|.+.....    ...+..||||++....  .......+.+|+.++.++ +||||+++++++
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDK----TATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSS----TTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCc----cccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            789999999999999999998754321    1233469999997653  223445677899999999 799999999998


Q ss_pred             EeCC-eEEEEEeeccCCchhhhhhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          159 EASN-FSCIVMEFCSGGDLHSLRHKQPH--------------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       159 ~~~~-~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      ...+ .+++||||++|++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            7654 59999999999999999987542              22889999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.+||+|||++......                                                     ......
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~-----------------------------------------------------~~~~~~  207 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKD-----------------------------------------------------PDYVRK  207 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTC-----------------------------------------------------TTSEEE
T ss_pred             ECCCCCEEECCCccccccccC-----------------------------------------------------ccceec
Confidence            999999999999998532110                                                     001111


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHH-HHHhcCCC-CCCCCCCCCcChHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTL-RNIVKKPL-TFPTQSPSSMSEYHARD  380 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~-~~i~~~~~-~~~~~~~~~~~~~~~~~  380 (451)
                      ....||+.|+|||++.+..++.++|||||||++|+|++ |..||........+ ..+..+.. ..+     ...+.++.+
T Consensus       208 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~  282 (316)
T 2xir_A          208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-----DYTTPEMYQ  282 (316)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCC-----TTCCHHHHH
T ss_pred             cCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCC-----CCCCHHHHH
Confidence            23467889999999999899999999999999999998 99999886654443 33333321 112     223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +|.+||+.||.+||+    +.|+++|
T Consensus       283 li~~~l~~dp~~Rps----~~ell~~  304 (316)
T 2xir_A          283 TMLDCWHGEPSQRPT----FSELVEH  304 (316)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcCCChhhCcC----HHHHHHH
Confidence            999999999999999    9999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=7.8e-45  Score=346.26  Aligned_cols=254  Identities=20%  Similarity=0.296  Sum_probs=208.6

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      +.+..++|++.+.||+|+||.||+|.+....          .||||++.....    ....+.+|+.+++.++||||+++
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----------~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~   73 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL   73 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTE----------EEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEEcCCc----------EEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceE
Confidence            3445578999999999999999999976543          399999975422    23567779999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++. .+..++||||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        74 ~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~D  152 (279)
T 1qpc_A           74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIAD  152 (279)
T ss_dssp             EEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             EEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECC
Confidence            99886 45689999999999999998764334699999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++........                                                      .......|+..|+|
T Consensus       153 fg~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~a  178 (279)
T 1qpc_A          153 FGLARLIEDNEY------------------------------------------------------TAREGAKFPIKWTA  178 (279)
T ss_dssp             CTTCEECSSSCE------------------------------------------------------ECCTTCCCCTTTSC
T ss_pred             CcccccccCccc------------------------------------------------------ccccCCCCccCccC
Confidence            999853321100                                                      00112256788999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+..++.++|||||||++|+|++ |+.||......+....+..+.....    +...+.++.+|+.+||+.||++|
T Consensus       179 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R  254 (279)
T 1qpc_A          179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR----PDNCPEELYQLMRLCWKERPEDR  254 (279)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCC----cccccHHHHHHHHHHhccChhhC
Confidence            999988889999999999999999999 9999999888887777766532211    12234489999999999999999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      |+    +.++++
T Consensus       255 ps----~~~l~~  262 (279)
T 1qpc_A          255 PT----FDYLRS  262 (279)
T ss_dssp             CC----HHHHHH
T ss_pred             CC----HHHHHH
Confidence            99    888875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.3e-45  Score=354.36  Aligned_cols=257  Identities=16%  Similarity=0.194  Sum_probs=203.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.+..+++.     ....||+|.+....  .......+.+|+.++++++||||+++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   86 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGIC   86 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCS-----CCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCce-----EEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEE
Confidence            37899999999999999999998766543     11125777765331  223345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+. .++|+||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        87 ~~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a  164 (327)
T 3lzb_A           87 LTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             ESSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred             ecCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence            8765 789999999999999988753 45999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                     ........||+.|+|||++
T Consensus       165 ~~~~~~~~-----------------------------------------------------~~~~~~~~~t~~y~aPE~~  191 (327)
T 3lzb_A          165 KLLGAEEK-----------------------------------------------------EYHAEGGKVPIKWMALESI  191 (327)
T ss_dssp             --------------------------------------------------------------------CCCGGGSCHHHH
T ss_pred             eEccCccc-----------------------------------------------------cccccCCCccccccCHHHH
Confidence            53221100                                                     0011123567889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |+.||......+....+........    +...+.++.+||.+||+.||.+||+  
T Consensus       192 ~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps--  265 (327)
T 3lzb_A          192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----PPICTIDVYMIMRKCWMIDADSRPK--  265 (327)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC----CTTBCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC----CccCCHHHHHHHHHHcCCChhHCcC--
Confidence            99999999999999999999999 9999998877777666655532211    1223448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.||++
T Consensus       266 --~~ell~  271 (327)
T 3lzb_A          266 --FRELII  271 (327)
T ss_dssp             --HHHHHH
T ss_pred             --HHHHHH
Confidence              999886

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.8e-44  Score=345.25  Aligned_cols=249  Identities=22%  Similarity=0.334  Sum_probs=199.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH----HHHHHHHHHHHHHHHCCCCCcccee
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK----KKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      ++|.+.+.||+|+||+||+|.+..+++         .||||++........    .....+.+|+.++++++||||++++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   89 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY   89 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCC---------EEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             ccceehhccccCCceeEEEEEEcCCce---------EEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhh
Confidence            789999999999999999999987665         499999865432211    1125677899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccCCC----
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSDGH----  229 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~~~----  229 (451)
                      +++.+..  ++||||+++++|.+++... ...+++..++.++.||+.||+|||++|  |+||||||+|||++.++.    
T Consensus        90 ~~~~~~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~  166 (287)
T 4f0f_A           90 GLMHNPP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV  166 (287)
T ss_dssp             EEETTTT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred             eeecCCC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCce
Confidence            9997665  6999999999999888654 346999999999999999999999999  999999999999988776    


Q ss_pred             -EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          230 -IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       230 -~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                       +||+|||++.....                                                          ......|
T Consensus       167 ~~kl~Dfg~~~~~~~----------------------------------------------------------~~~~~~g  188 (287)
T 4f0f_A          167 CAKVADFGLSQQSVH----------------------------------------------------------SVSGLLG  188 (287)
T ss_dssp             CEEECCCTTCBCCSS----------------------------------------------------------CEECCCC
T ss_pred             eEEeCCCCccccccc----------------------------------------------------------cccccCC
Confidence             99999999742110                                                          1112478


Q ss_pred             CCCccCccccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          309 THEYVSPEVAS--GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT--LRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       309 t~~y~aPE~~~--~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      |+.|+|||++.  +..++.++|||||||++|+|++|+.||........  ...+........  .. ...+..+.+||.+
T Consensus       189 ~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~li~~  265 (287)
T 4f0f_A          189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT--IP-EDCPPRLRNVIEL  265 (287)
T ss_dssp             CCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC--CC-TTSCHHHHHHHHH
T ss_pred             CccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC--CC-cccCHHHHHHHHH
Confidence            99999999984  44578999999999999999999999987554332  333333322211  11 2234489999999


Q ss_pred             hcccCcCCcCCCCCChHHHHc
Q 013016          385 LLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ||+.||.+||+    +.|+++
T Consensus       266 ~l~~dp~~Rps----~~~ll~  282 (287)
T 4f0f_A          266 CWSGDPKKRPH----FSYIVK  282 (287)
T ss_dssp             HTCSSGGGSCC----HHHHHH
T ss_pred             HhcCChhhCcC----HHHHHH
Confidence            99999999999    999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=9.5e-45  Score=369.73  Aligned_cols=258  Identities=22%  Similarity=0.309  Sum_probs=209.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.++||+|+||.||+|.++.+.          .||||++.....    ..+.+.+|+.++++++||||+++++
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~----------~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~  246 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYA  246 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTE----------EEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCc----------eEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            44478999999999999999999987653          399999985432    2345778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++.. +..|+||||+++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       247 ~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG  325 (452)
T 1fmk_A          247 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  325 (452)
T ss_dssp             EECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCc
Confidence            9876 678999999999999999976544569999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++.......                                                      ........++..|+|||
T Consensus       326 ~a~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE  351 (452)
T 1fmk_A          326 LARLIEDNE------------------------------------------------------YTARQGAKFPIKWTAPE  351 (452)
T ss_dssp             TTC--------------------------------------------------------------------CCGGGSCHH
T ss_pred             cceecCCCc------------------------------------------------------eecccCCcccccccCHh
Confidence            985321100                                                      00011125677899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++|||||||++|||++ |+.||.+....+.+..+..+.....    +...+..+.+||.+||+.||++|||
T Consensus       352 ~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt  427 (452)
T 1fmk_A          352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC----PPECPESLHDLMCQCWRKEPEERPT  427 (452)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHccCChhhCcC
Confidence            9998899999999999999999999 9999999888888887766532111    1223448999999999999999999


Q ss_pred             CCCChHHHHc--CCCcCC
Q 013016          396 SKRGAADVKT--HPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~--hp~~~~  411 (451)
                          +++|++  ..++..
T Consensus       428 ----~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          428 ----FEYLQAFLEDYFTS  441 (452)
T ss_dssp             ----HHHHHHHHHTTTSC
T ss_pred             ----HHHHHHHHHHHhcc
Confidence                988875  244444

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3.9e-44  Score=343.77  Aligned_cols=256  Identities=20%  Similarity=0.241  Sum_probs=205.2

Q ss_pred             cCCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           79 FRDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .++|.+.+ .||+|+||+||+|.+....       .+..||||++..... .......+.+|+.+++.++||||++++++
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKK-------VVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSS-------SEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCC-------ceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            36799998 9999999999999664321       122599999986532 23345678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      + ..+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        87 ~-~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  163 (291)
T 1xbb_A           87 C-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL  163 (291)
T ss_dssp             E-ESSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             E-CCCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCc
Confidence            9 567889999999999999999875  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                    .........|++.|+|||+
T Consensus       164 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~  191 (291)
T 1xbb_A          164 SKALRADEN----------------------------------------------------YYKAQTHGKWPVKWYAPEC  191 (291)
T ss_dssp             CEECCTTCS----------------------------------------------------EEEC----CCCGGGCCHHH
T ss_pred             ceeeccCCC----------------------------------------------------cccccccCCCCceeeChHH
Confidence            853321100                                                    0000111246788999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++||||||+++|+|++ |+.||......+....+..+.....    +...+..+.++|.+||+.||.+||+ 
T Consensus       192 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps-  266 (291)
T 1xbb_A          192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC----PAGCPREMYDLMNLCWTYDVENRPG-  266 (291)
T ss_dssp             HHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSTTTSCC-
T ss_pred             hccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCChhhCcC-
Confidence            988889999999999999999999 9999999888777777666532211    1223448999999999999999999 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.++++
T Consensus       267 ---~~~l~~  272 (291)
T 1xbb_A          267 ---FAAVEL  272 (291)
T ss_dssp             ---HHHHHH
T ss_pred             ---HHHHHH
Confidence               888874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.5e-44  Score=358.06  Aligned_cols=268  Identities=16%  Similarity=0.200  Sum_probs=196.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH--------HHHHHHHHHHHHHHCCCCCc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK--------KVHRAEMEKKILKMLDHPFL  151 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~nI  151 (451)
                      ++|.+.++||+|+||+||+|.++.+...    ..+..||||++.........        .......|+..++.++|+||
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~----~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESV----GSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCC----CTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCcccc----ccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            6799999999999999999998765321    11224999998754321111        11123345666778899999


Q ss_pred             cceeEEEEeC----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc--
Q 013016          152 PTLYAEFEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR--  225 (451)
Q Consensus       152 v~l~~~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~--  225 (451)
                      +++++++...    .+.||||||+ |++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++  
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred             CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence            9999999765    5689999999 99999999874 35699999999999999999999999999999999999999  


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.+||+|||++...........                                                ........
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~------------------------------------------------~~~~~~~~  220 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKA------------------------------------------------YAADPKRC  220 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCC------------------------------------------------SSCCSSCC
T ss_pred             CCCeEEEEECCcceecccCCcccc------------------------------------------------cccCcccc
Confidence            889999999999854321110000                                                00111123


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc----CCC-CCCC-CCCCCcChHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----KPL-TFPT-QSPSSMSEYHAR  379 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~----~~~-~~~~-~~~~~~~~~~~~  379 (451)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||..............    ... .... .......+.++.
T Consensus       221 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (364)
T 3op5_A          221 HDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIA  300 (364)
T ss_dssp             CCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHH
T ss_pred             cCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHH
Confidence            5799999999999999999999999999999999999999986433222111111    000 0000 000112234899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +|+..||+.||.+||+    +.+|++
T Consensus       301 ~li~~cl~~~p~~RP~----~~~l~~  322 (364)
T 3op5_A          301 KYMETVKLLDYTEKPL----YENLRD  322 (364)
T ss_dssp             HHHHHHHTCCTTCCCC----HHHHHH
T ss_pred             HHHHHHhcCCCCCCCC----HHHHHH
Confidence            9999999999999999    777664

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=4.6e-44  Score=344.22  Aligned_cols=258  Identities=16%  Similarity=0.219  Sum_probs=205.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE-
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF-  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~-  158 (451)
                      .+|++.++||+|+||+||+|.+.....      ....+|+|++....  .......+.+|+.++++++||||+++++++ 
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   96 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICL   96 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----------CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCC------ceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE
Confidence            679999999999999999999764432      12348999987532  234456677899999999999999999986 


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++..|+||||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        97 ~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A           97 RSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             cCCCceEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccc
Confidence            4556889999999999999999764 355899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                   .........||+.|+|||.+
T Consensus       176 ~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~aPE~~  204 (298)
T 3f66_A          176 RDMYDKEYY---------------------------------------------------SVHNKTGAKLPVKWMALESL  204 (298)
T ss_dssp             CCCSCGGGC---------------------------------------------------BC-----CCBCGGGSCHHHH
T ss_pred             ccccccchh---------------------------------------------------ccccccCCCCCccccChHHh
Confidence            533211000                                                   00111123678899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |.+||......+....+..+......    ...+..+.+++.+||+.||.+||+  
T Consensus       205 ~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps--  278 (298)
T 3f66_A          205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP----EYCPDPLYEVMLKCWHPKAEMRPS--  278 (298)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcC--
Confidence            99899999999999999999999 77788877777776666665443322    223448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.|+++
T Consensus       279 --~~ell~  284 (298)
T 3f66_A          279 --FSELVS  284 (298)
T ss_dssp             --HHHHHH
T ss_pred             --HHHHHH
Confidence              888875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.5e-44  Score=346.03  Aligned_cols=259  Identities=21%  Similarity=0.296  Sum_probs=202.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.+.....      ....||||++...........+.+.+|+.++++++||||+++++++.
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   91 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSG------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL   91 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTS------CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCC------ceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence            689999999999999999998754321      12248999998765444556677888999999999999999999998


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+ .++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccc
Confidence            765 889999999999999887642 458999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                    .........||..|+|||++.
T Consensus       170 ~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          170 ALPQNDD----------------------------------------------------HYVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             ECCC-CC----------------------------------------------------EEEC-----CCGGGCCHHHHH
T ss_pred             ccccccc----------------------------------------------------chhhhccCCCCceeeCchhhc
Confidence            3321100                                                    000111235778899999998


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++||||||+++|+|++ |+.||......+.+..+.......+.   +...+.++.++|.+||+.||.+||+   
T Consensus       198 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps---  271 (291)
T 1u46_A          198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPT---  271 (291)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC---
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC---CcCcCHHHHHHHHHHccCCcccCcC---
Confidence            8888999999999999999999 99999998888888887765443332   1223448999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.++++
T Consensus       272 -~~~l~~  277 (291)
T 1u46_A          272 -FVALRD  277 (291)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             999986

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.3e-45  Score=363.68  Aligned_cols=255  Identities=22%  Similarity=0.330  Sum_probs=203.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|.++.+++         .||||++.....  ......+.+|+.++++++||||+++++++.
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~---------~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   77 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGD---------LFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEE   77 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCc---------EEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeec
Confidence            679999999999999999999987665         499999986532  223455667999999999999999999998


Q ss_pred             eCC--eEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE----ccCCCEEE
Q 013016          160 ASN--FSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV----RSDGHIML  232 (451)
Q Consensus       160 ~~~--~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl  232 (451)
                      ..+  +.|+||||++||+|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||
T Consensus        78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (396)
T 4eut_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKL  157 (396)
T ss_dssp             CTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEE
T ss_pred             cCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEE
Confidence            765  8899999999999999987643 2349999999999999999999999999999999999999    67778999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        ......+||+.|
T Consensus       158 ~DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  181 (396)
T 4eut_A          158 TDFGAARELEDD--------------------------------------------------------EQFVSLYGTEEY  181 (396)
T ss_dssp             CCGGGCEECCCG--------------------------------------------------------GGSSCSSSCCTT
T ss_pred             ecCCCceEccCC--------------------------------------------------------CccccccCCccc
Confidence            999998532110                                                        011134799999


Q ss_pred             cCcccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCCC----CChHHHHHHHhcCCCCCCC-------------
Q 013016          313 VSPEVASG--------GSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPT-------------  367 (451)
Q Consensus       313 ~aPE~~~~--------~~~~~~~DIwSlG~il~elltg~~pf~~----~~~~~~~~~i~~~~~~~~~-------------  367 (451)
                      +|||++.+        ..++.++|||||||++|+|++|+.||..    ....+.+..+..+.+....             
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (396)
T 4eut_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (396)
T ss_dssp             CCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCccc
Confidence            99999865        4568899999999999999999999964    3345566666655432110             


Q ss_pred             -------CCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          368 -------QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       368 -------~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                             .......+..+.+||.+||++||++||+    +.++++
T Consensus       262 ~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s----~~e~l~  302 (396)
T 4eut_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG----FDQFFA  302 (396)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC----HHHHHH
T ss_pred             CccCCcccccchHHHhhchHHHHHhhccChhhhcc----HHHHHH
Confidence                   0001122337889999999999999999    888743

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.5e-44  Score=346.85  Aligned_cols=260  Identities=18%  Similarity=0.257  Sum_probs=203.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+.....      .+..||||++..... .......+.+|+.++++++||||+++++++
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDG------TSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTS------CEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCC------ceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            3789999999999999999998765321      223599999975432 233456678899999999999999999999


Q ss_pred             EeCC-----eEEEEEeeccCCchhhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC
Q 013016          159 EASN-----FSCIVMEFCSGGDLHSLRHKQ----PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH  229 (451)
Q Consensus       159 ~~~~-----~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~  229 (451)
                      ...+     ..++||||+++++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence            7655     459999999999999988532    2356999999999999999999999999999999999999999999


Q ss_pred             EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccC
Q 013016          230 IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT  309 (451)
Q Consensus       230 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  309 (451)
                      +||+|||++.......                                                     .........|+
T Consensus       186 ~kl~Dfg~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~  212 (313)
T 3brb_A          186 VCVADFGLSKKIYSGD-----------------------------------------------------YYRQGRIAKMP  212 (313)
T ss_dssp             EEECSCSCC---------------------------------------------------------------------CC
T ss_pred             EEEeecCcceeccccc-----------------------------------------------------ccCcccccCCC
Confidence            9999999984321100                                                     00001123577


Q ss_pred             CCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       310 ~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      +.|+|||.+.+..++.++|||||||++|+|++ |..||...........+..+.....   . ...+..+.+||.+||+.
T Consensus       213 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~li~~~l~~  288 (313)
T 3brb_A          213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ---P-EDCLDELYEIMYSCWRT  288 (313)
T ss_dssp             GGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC---B-TTCCHHHHHHHHHTTCS
T ss_pred             ccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCC---C-ccccHHHHHHHHHHcCC
Confidence            88999999999999999999999999999999 9999999888887777776543211   1 12334899999999999


Q ss_pred             CcCCcCCCCCChHHHHcC
Q 013016          389 DPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       389 dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+||+    +.+|+++
T Consensus       289 dp~~Rps----~~~l~~~  302 (313)
T 3brb_A          289 DPLDRPT----FSVLRLQ  302 (313)
T ss_dssp             SGGGSCC----HHHHHHH
T ss_pred             ChhhCcC----HHHHHHH
Confidence            9999999    9998863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=365.39  Aligned_cols=259  Identities=25%  Similarity=0.348  Sum_probs=196.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      .+|.+.+.||+|+||+||...... ++         .||||++.....      ..+.+|+.+++.+ +|||||++++++
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~-~~---------~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~   87 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFD-NR---------DVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTE   87 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESS-SS---------EEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeC-Ce---------EEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEE
Confidence            469999999999999966433322 22         499999975421      2345699999999 799999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---C--CCEEEe
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---D--GHIMLS  233 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~--~~~kl~  233 (451)
                      .+.+..||||||| +|+|.+++.... ..+.+..++.++.||+.||+|||++||+||||||+|||++.   +  ..+||+
T Consensus        88 ~~~~~~~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~  165 (432)
T 3p23_A           88 KDRQFQYIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMIS  165 (432)
T ss_dssp             EETTEEEEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred             ecCCEEEEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence            9999999999999 579999987654 33555667899999999999999999999999999999953   2  368899


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.......                                                    .........+||+.|+
T Consensus       166 DFG~a~~~~~~~----------------------------------------------------~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          166 DFGLCKKLAVGR----------------------------------------------------HSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             CTTEEECC----------------------------------------------------------------CCSCTTSC
T ss_pred             cccceeeccCCC----------------------------------------------------cceeeccccCCCcCcc
Confidence            999985332100                                                    0001112357999999


Q ss_pred             CcccccC---CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          314 SPEVASG---GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       314 aPE~~~~---~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |||++.+   ..++.++|||||||++|+|++ |..||...........  ...............+..+.+||.+||+.|
T Consensus       194 APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  271 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--LGACSLDCLHPEKHEDVIARELIEKMIAMD  271 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH--TTCCCCTTSCTTCHHHHHHHHHHHHHSCSS
T ss_pred             ChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH--hccCCccccCccccccHHHHHHHHHHHhCC
Confidence            9999974   557889999999999999999 9999976544443222  222222222222333446899999999999


Q ss_pred             cCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          390 PCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      |.+|||    +.||++||||.++.+
T Consensus       272 P~~Rps----~~evl~hp~f~~~~~  292 (432)
T 3p23_A          272 PQKRPS----AKHVLKHPFFWSLEK  292 (432)
T ss_dssp             GGGSCC----HHHHHTSTTTCCHHH
T ss_pred             HhhCCC----HHHHHhCccccChHH
Confidence            999999    999999999998665

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.3e-44  Score=344.63  Aligned_cols=248  Identities=21%  Similarity=0.299  Sum_probs=201.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|++.+.||+|+||+||+|.+.+.           .||||++....     ..+.+.+|+.++++++||||++++
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----------~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~   80 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLL   80 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTE-----------EEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEE
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEcCC-----------EEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEE
Confidence            34558899999999999999999987533           39999997542     345677799999999999999999


Q ss_pred             EEEEeC-CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          156 AEFEAS-NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       156 ~~~~~~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      +++... +..|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~D  160 (278)
T 1byg_A           81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSD  160 (278)
T ss_dssp             EEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred             EEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEee
Confidence            987544 5899999999999999998765434489999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++......                                                          .....+++.|+|
T Consensus       161 fg~~~~~~~~----------------------------------------------------------~~~~~~~~~y~a  182 (278)
T 1byg_A          161 FGLTKEASST----------------------------------------------------------QDTGKLPVKWTA  182 (278)
T ss_dssp             CCC----------------------------------------------------------------------CCTTTSC
T ss_pred             cccccccccc----------------------------------------------------------ccCCCccccccC
Confidence            9997421100                                                          011256788999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+..++.++||||||+++|+|++ |+.||......+....+..+....   . +...+..+.++|.+||+.||.+|
T Consensus       183 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~l~~li~~~l~~~p~~R  258 (278)
T 1byg_A          183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD---A-PDGCPPAVYEVMKNCWHLDAAMR  258 (278)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC---C-CTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC---C-cccCCHHHHHHHHHHhcCChhhC
Confidence            999998889999999999999999998 999999887777777766553211   1 12234489999999999999999


Q ss_pred             CCCCCChHHHHc
Q 013016          394 LGSKRGAADVKT  405 (451)
Q Consensus       394 pt~~~~~~ell~  405 (451)
                      |+    +.|+++
T Consensus       259 ps----~~~l~~  266 (278)
T 1byg_A          259 PS----FLQLRE  266 (278)
T ss_dssp             CC----HHHHHH
T ss_pred             CC----HHHHHH
Confidence            99    888875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.5e-44  Score=344.05  Aligned_cols=254  Identities=23%  Similarity=0.401  Sum_probs=199.3

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.+.||+|+||+||+|.+.+.           .||||++...     .....+.+|+.++++++||||+++++
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~-----------~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~   68 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRAK-----------DVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYG   68 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETTE-----------EEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECCe-----------eEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence            3457899999999999999999987643           3999999743     23356778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCCCCcEEEccCCC-EE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHM---LGIIYRDLKPENVLVRSDGH-IM  231 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~---~givH~Dlkp~NIll~~~~~-~k  231 (451)
                      ++.  +..|+||||++|++|.+++..... ..+++..++.++.||+.||+|||+   +||+||||||+|||++.++. +|
T Consensus        69 ~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~k  146 (307)
T 2eva_A           69 ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK  146 (307)
T ss_dssp             BCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEE
T ss_pred             EEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEE
Confidence            886  348999999999999999986532 247899999999999999999999   89999999999999998886 79


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.....                                                          ......||+.
T Consensus       147 l~Dfg~~~~~~~----------------------------------------------------------~~~~~~gt~~  168 (307)
T 2eva_A          147 ICDFGTACDIQT----------------------------------------------------------HMTNNKGSAA  168 (307)
T ss_dssp             ECCCCC----------------------------------------------------------------------CCTT
T ss_pred             Eccccccccccc----------------------------------------------------------ccccCCCCCc
Confidence            999999742110                                                          0012368999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKD  389 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~d  389 (451)
                      |+|||++.+..++.++|||||||++|+|++|+.||.....  ......+..+....   .. ...+..+.+|+.+||+.|
T Consensus       169 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~l~~li~~~l~~d  244 (307)
T 2eva_A          169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP---LI-KNLPKPIESLMTRCWSKD  244 (307)
T ss_dssp             SSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC---CB-TTCCHHHHHHHHHHTCSS
T ss_pred             eEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC---cc-cccCHHHHHHHHHHhcCC
Confidence            9999999998999999999999999999999999986433  22333333332211   11 123348999999999999


Q ss_pred             cCCcCCCCCChHHHHc-----CCCcCCCCc
Q 013016          390 PCNRLGSKRGAADVKT-----HPFFKGLNF  414 (451)
Q Consensus       390 P~~Rpt~~~~~~ell~-----hp~~~~~~~  414 (451)
                      |.+|||    +.++++     ..++.+.+.
T Consensus       245 p~~Rps----~~ell~~L~~~~~~~~~~~~  270 (307)
T 2eva_A          245 PSQRPS----MEEIVKIMTHLMRYFPGADE  270 (307)
T ss_dssp             GGGSCC----HHHHHHHHHHHGGGCCCTTS
T ss_pred             hhhCcC----HHHHHHHHHHHHHhccCCCC
Confidence            999999    999887     355555443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.7e-44  Score=346.32  Aligned_cols=259  Identities=22%  Similarity=0.274  Sum_probs=198.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||.||+|.+....     ...+..||||++....  .......+.+|+.+++.++|+||+++++++.
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEG-----DNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICT   93 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTS-----SSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hhhhhhhccCCCCceEEEEEEEcccc-----CccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            56999999999999999999853221     1123359999998653  2334466778999999999999999999998


Q ss_pred             eC--CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          160 AS--NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       160 ~~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      ..  +.+++||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        94 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A           94 EDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             C---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             cCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccc
Confidence            76  67899999999999999986543 4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                    .........||..|+|||+
T Consensus       173 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~  200 (302)
T 4e5w_A          173 TKAIETDKE----------------------------------------------------YYTVKDDRDSPVFWYAPEC  200 (302)
T ss_dssp             CEECCTTCC----------------------------------------------------EEECCCCTTCCGGGCCHHH
T ss_pred             cccccCCCc----------------------------------------------------ceeccCCCCCCccccCCee
Confidence            853321100                                                    0011112368888999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--------------ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP--------------SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      +.+..++.++|||||||++|+|++|..|+...              .....+..........+   .+...+.++.+||.
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~  277 (302)
T 4e5w_A          201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP---CPPNCPDEVYQLMR  277 (302)
T ss_dssp             HHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC---CCTTCCHHHHHHHH
T ss_pred             ecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC---CCCCCCHHHHHHHH
Confidence            99988999999999999999999999986432              11112222222221111   11223448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHc
Q 013016          384 GLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||+.||.+|||    +.++++
T Consensus       278 ~~l~~dp~~Rps----~~~ll~  295 (302)
T 4e5w_A          278 KCWEFQPSNRTS----FQNLIE  295 (302)
T ss_dssp             HTTCSSGGGSCC----HHHHHH
T ss_pred             HHcCCCCCCCCC----HHHHHH
Confidence            999999999999    998875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2e-44  Score=343.84  Aligned_cols=247  Identities=24%  Similarity=0.357  Sum_probs=205.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||+|++....       ..+.+|+.++++++||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~   74 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWD   74 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCC---------EEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCe---------EEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEe
Confidence            679999999999999999999886655         49999997542       23456999999999999999999886


Q ss_pred             e----------------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          160 A----------------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       160 ~----------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                      .                ...+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil  154 (284)
T 2a19_B           75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF  154 (284)
T ss_dssp             EEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             ccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEE
Confidence            4                456899999999999999998765667999999999999999999999999999999999999


Q ss_pred             EccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccc
Q 013016          224 VRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS  303 (451)
Q Consensus       224 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (451)
                      ++.++.+||+|||++.......                                                        ..
T Consensus       155 ~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------------~~  178 (284)
T 2a19_B          155 LVDTKQVKIGDFGLVTSLKNDG--------------------------------------------------------KR  178 (284)
T ss_dssp             EEETTEEEECCCTTCEESSCCS--------------------------------------------------------CC
T ss_pred             EcCCCCEEECcchhheeccccc--------------------------------------------------------cc
Confidence            9999999999999975322100                                                        01


Q ss_pred             cccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHH
Q 013016          304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS  383 (451)
Q Consensus       304 ~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~  383 (451)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..|+..  .......+.....       +...+..+.+||.
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~~li~  249 (284)
T 2a19_B          179 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--TSKFFTDLRDGII-------SDIFDKKEKTLLQ  249 (284)
T ss_dssp             CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--HHHHHHHHHTTCC-------CTTSCHHHHHHHH
T ss_pred             cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--HHHHHHHhhcccc-------cccCCHHHHHHHH
Confidence            123689999999999998899999999999999999999998753  2223333333321       1233448999999


Q ss_pred             HhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          384 GLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       384 ~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +||+.||.+||+    +.|+++|.|.-.
T Consensus       250 ~~l~~dp~~Rps----~~e~l~~l~~~~  273 (284)
T 2a19_B          250 KLLSKKPEDRPN----TSEILRTLTVWK  273 (284)
T ss_dssp             HHTCSSGGGSCC----HHHHHHHHHHHT
T ss_pred             HHccCChhhCcC----HHHHHHHHHHHh
Confidence            999999999999    999999877654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4.6e-44  Score=344.81  Aligned_cols=235  Identities=24%  Similarity=0.416  Sum_probs=188.4

Q ss_pred             ccCCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHH-HHCCCCCcccee
Q 013016           78 TFRDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL-KMLDHPFLPTLY  155 (451)
Q Consensus        78 ~~~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~nIv~l~  155 (451)
                      ..++|.+. +.||+|+||.||+|.++.+++         .||||++...        ....+|+.++ +.++||||++++
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~---------~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~   77 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQE---------KFALKMLQDC--------PKARREVELHWRASQCPHIVRIV   77 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCc---------EEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHH
Confidence            44788887 779999999999999877665         4999999643        2344577777 666999999999


Q ss_pred             EEEEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CC
Q 013016          156 AEFEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DG  228 (451)
Q Consensus       156 ~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~  228 (451)
                      +++..    .+.+|+||||++|++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.   ++
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  157 (299)
T 3m2w_A           78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  157 (299)
T ss_dssp             EEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC
T ss_pred             hhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCC
Confidence            99987    778999999999999999998876667999999999999999999999999999999999999998   78


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||++..                                                                    
T Consensus       158 ~~kl~Dfg~a~~--------------------------------------------------------------------  169 (299)
T 3m2w_A          158 ILKLTDFGFAKE--------------------------------------------------------------------  169 (299)
T ss_dssp             CEEECCCTTCEE--------------------------------------------------------------------
T ss_pred             cEEEeccccccc--------------------------------------------------------------------
Confidence            999999999731                                                                    


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC----CCCCCCCCCCCcChHHHHHHHHH
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK----PLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                               +.+..++.++|||||||++|+|++|+.||...........+...    ...++.... ...+.++.+||.+
T Consensus       170 ---------~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~  239 (299)
T 3m2w_A          170 ---------TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW-SEVSEEVKMLIRN  239 (299)
T ss_dssp             ---------CTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHH-TTSCHHHHHHHHH
T ss_pred             ---------cccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhc-ccCCHHHHHHHHH
Confidence                     11245678999999999999999999999875544332222221    111111000 1234489999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||+.||.+|||    +.|+++||||++
T Consensus       240 ~l~~dP~~Rps----~~e~l~hp~~~~  262 (299)
T 3m2w_A          240 LLKTEPTQRMT----ITEFMNHPWIMQ  262 (299)
T ss_dssp             HTCSSTTTSCC----HHHHHTSHHHHT
T ss_pred             HcccChhhCCC----HHHHhcChhhcc
Confidence            99999999999    999999999988

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.5e-44  Score=376.21  Aligned_cols=255  Identities=19%  Similarity=0.261  Sum_probs=204.3

Q ss_pred             cCCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           79 FRDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++.+.+ +||+|+||.||+|.++....       +..||||++....  .....+.+.+|+.++++++|||||+++++
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~-------~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~  404 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKK-------QIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGV  404 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSC-------EEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCC-------cEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            35666666 89999999999998864321       2249999997542  22345677889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.. +.+|+|||||.+|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+
T Consensus       405 ~~~-~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGl  482 (613)
T 2ozo_A          405 CQA-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL  482 (613)
T ss_dssp             EES-SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCST
T ss_pred             ecc-CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccC
Confidence            976 5699999999999999998754 35699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +........                                                    .........+++.|+|||+
T Consensus       483 a~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~APE~  510 (613)
T 2ozo_A          483 SKALGADDS----------------------------------------------------YYTARSAGKWPLKWYAPEC  510 (613)
T ss_dssp             TTTCC------------------------------------------------------------------CCTTSCHHH
T ss_pred             cccccCCCc----------------------------------------------------eeeeccCCCCccceeCHhh
Confidence            853321000                                                    0000111246788999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||+||||++ |+.||......+.+..+..+.....    +...+.++.+||.+||+.||++||+ 
T Consensus       511 ~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~dP~~RPs-  585 (613)
T 2ozo_A          511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC----PPECPPELYALMSDCWIYKWEDRPD-  585 (613)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHTTCSSTTTSCC-
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC----CCcCCHHHHHHHHHHcCCChhHCcC-
Confidence            998899999999999999999998 9999999888888888776642211    1223448999999999999999999 


Q ss_pred             CCChHHHH
Q 013016          397 KRGAADVK  404 (451)
Q Consensus       397 ~~~~~ell  404 (451)
                         +.+|+
T Consensus       586 ---~~~l~  590 (613)
T 2ozo_A          586 ---FLTVE  590 (613)
T ss_dssp             ---HHHHH
T ss_pred             ---HHHHH
Confidence               88874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-43  Score=340.31  Aligned_cols=258  Identities=16%  Similarity=0.192  Sum_probs=204.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      -.|.+.++||+|+||+||+|.+..+.+      .+..||+|++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   92 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQ------NRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIML   92 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSS------CEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC
T ss_pred             eEEccCceeccCCCceEEEEEEecCCC------ceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe
Confidence            347788999999999999999765432      12349999987532  2344567778999999999999999999998


Q ss_pred             eCCeE-EEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 ASNFS-CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 ~~~~~-~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..+.. ++||||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        93 ~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  171 (298)
T 3pls_A           93 PPEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA  171 (298)
T ss_dssp             CSSSCCEEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred             cCCCCcEEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence            76655 9999999999999998764 356899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                   .........|++.|+|||.+
T Consensus       172 ~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~aPE~~  200 (298)
T 3pls_A          172 RDILDREYY---------------------------------------------------SVQQHRHARLPVKWTALESL  200 (298)
T ss_dssp             CTTTTGGGG---------------------------------------------------CSCCSSCTTCGGGGSCHHHH
T ss_pred             ccccCCccc---------------------------------------------------ccccCcCCCCCccccChhhh
Confidence            532210000                                                   00111223678899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|+|++ |.+||......+....+........    +...+..+.+|+.+||+.||.+|||  
T Consensus       201 ~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps--  274 (298)
T 3pls_A          201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ----PEYCPDSLYQVMQQCWEADPAVRPT--  274 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             ccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC----CccchHHHHHHHHHHccCChhhCcC--
Confidence            99999999999999999999999 5555666666666666655542221    1223448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.++++
T Consensus       275 --~~~ll~  280 (298)
T 3pls_A          275 --FRVLVG  280 (298)
T ss_dssp             --HHHHHH
T ss_pred             --HHHHHH
Confidence              888875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=5.9e-44  Score=362.02  Aligned_cols=259  Identities=25%  Similarity=0.341  Sum_probs=192.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      +.|.+.+.||+|+||+||.+.... ++         .||||++....      ...+.+|+.+++++ +||||+++++++
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~-g~---------~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~   78 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQ-GR---------PVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSE   78 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESS-SS---------EEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             heeeccCeEeeCCCeEEEEEEEEC-Ce---------EEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEE
Confidence            446778899999999998754332 22         49999987542      23456799999876 899999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC------
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKR-----FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD------  227 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~-----l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~------  227 (451)
                      .+.+.+||||||| +|+|.+++.......     .++..++.++.||+.||+|||++||+||||||+|||++.+      
T Consensus        79 ~~~~~~~lv~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~  157 (434)
T 2rio_A           79 TTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTAD  157 (434)
T ss_dssp             ECSSEEEEEECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSC
T ss_pred             ecCCeEEEEEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccc
Confidence            9999999999999 579999997653211     1333567899999999999999999999999999999754      


Q ss_pred             -------CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          228 -------GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       228 -------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                             +.+||+|||++.........                                                   ..
T Consensus       158 ~~~~~~~~~~kL~DFG~a~~~~~~~~~---------------------------------------------------~~  186 (434)
T 2rio_A          158 QQTGAENLRILISDFGLCKKLDSGQSS---------------------------------------------------FR  186 (434)
T ss_dssp             CTTCCCSCEEEECCCTTCEECCC---------------------------------------------------------
T ss_pred             cccCCCceEEEEcccccceecCCCCcc---------------------------------------------------ce
Confidence                   48999999998543211000                                                   00


Q ss_pred             ccccccccCCCccCcccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCC--C
Q 013016          301 ARSCSFVGTHEYVSPEVASG-------GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQS--P  370 (451)
Q Consensus       301 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~--~  370 (451)
                      ......+||+.|+|||++.+       ..++.++|||||||++|||++ |+.||.......  ..+..+....+...  .
T Consensus       187 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~  264 (434)
T 2rio_A          187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLH  264 (434)
T ss_dssp             --------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCC
T ss_pred             eeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccc
Confidence            01123479999999999976       568999999999999999999 999998754443  33444433332211  1


Q ss_pred             CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       371 ~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      ....+.++.+||.+||+.||.+|||    +.+|++||||...
T Consensus       265 ~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~hp~f~~~  302 (434)
T 2rio_A          265 DRSLIAEATDLISQMIDHDPLKRPT----AMKVLRHPLFWPK  302 (434)
T ss_dssp             CHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSCH
T ss_pred             cccchHHHHHHHHHHhhCChhhCCC----HHHHHhCCccCCc
Confidence            1122347999999999999999999    9999999999763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2.2e-44  Score=374.40  Aligned_cols=258  Identities=22%  Similarity=0.306  Sum_probs=211.9

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||.||+|.++.+.          .||||++.....    ..+.+.+|+.+|++++|+||+++++
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~----------~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~  329 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTT----------RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYA  329 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTE----------EEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCc----------eEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            44577999999999999999999987654          399999985432    2346778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++.+ +.+||||||+.+|+|.+++.......+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||
T Consensus       330 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG  408 (535)
T 2h8h_A          330 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  408 (535)
T ss_dssp             EECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred             EEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccc
Confidence            9876 678999999999999999976544569999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      ++......                                                      .........++..|+|||
T Consensus       409 ~a~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE  434 (535)
T 2h8h_A          409 LARLIEDN------------------------------------------------------EYTARQGAKFPIKWTAPE  434 (535)
T ss_dssp             STTTCCCH------------------------------------------------------HHHTTCSTTSCGGGSCHH
T ss_pred             cceecCCC------------------------------------------------------ceecccCCcCcccccCHH
Confidence            98432100                                                      000001124677899999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++|||||||+||||++ |+.||.+....+.+..+..+.....    +...+..+.+||.+||+.||++|||
T Consensus       435 ~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt  510 (535)
T 2h8h_A          435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC----PPECPESLHDLMCQCWRKEPEERPT  510 (535)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCChhHCcC
Confidence            9998899999999999999999999 9999999888888887766532111    1223448999999999999999999


Q ss_pred             CCCChHHHHcC--CCcCC
Q 013016          396 SKRGAADVKTH--PFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~h--p~~~~  411 (451)
                          +.+|++.  .+|..
T Consensus       511 ----~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          511 ----FEYLQAFLEDYFTS  524 (535)
T ss_dssp             ----HHHHHHHHHTSSCC
T ss_pred             ----HHHHHHHHHHHhhc
Confidence                8888753  44443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.4e-44  Score=344.53  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=192.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH--CCCCCccceeE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM--LDHPFLPTLYA  156 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~nIv~l~~  156 (451)
                      .++|++.++||+|+||+||+|.+.+.           .||||++....      ...+..|.+++..  ++||||+++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----------~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~   69 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGE-----------NVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIA   69 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTE-----------EEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCE-----------EEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEE
Confidence            37899999999999999999987432           39999997542      1233446666666  79999999999


Q ss_pred             EEEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeccCCCCcEEE
Q 013016          157 EFEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH--------MLGIIYRDLKPENVLV  224 (451)
Q Consensus       157 ~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~givH~Dlkp~NIll  224 (451)
                      ++..    .+.+|+||||+++|+|.+++..   ..+++..++.++.||+.||+|||        ++||+||||||+|||+
T Consensus        70 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill  146 (301)
T 3q4u_A           70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV  146 (301)
T ss_dssp             EEEEEETTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE
T ss_pred             eeccccCCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE
Confidence            8754    3578999999999999999954   45999999999999999999999        9999999999999999


Q ss_pred             ccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccc
Q 013016          225 RSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC  304 (451)
Q Consensus       225 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (451)
                      +.++.+||+|||++.........                                                   ......
T Consensus       147 ~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------------~~~~~~  175 (301)
T 3q4u_A          147 KKNGQCCIADLGLAVMHSQSTNQ---------------------------------------------------LDVGNN  175 (301)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTE---------------------------------------------------EECCCC
T ss_pred             cCCCCEEEeeCCCeeeccccccc---------------------------------------------------cccccc
Confidence            99999999999998532211000                                                   000112


Q ss_pred             ccccCCCccCcccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCC----hHHHHHHHhcCCCC
Q 013016          305 SFVGTHEYVSPEVASGG------SHGNAVDWWAFGIFIYEMIYG----------RTPFAAPS----NETTLRNIVKKPLT  364 (451)
Q Consensus       305 ~~~gt~~y~aPE~~~~~------~~~~~~DIwSlG~il~elltg----------~~pf~~~~----~~~~~~~i~~~~~~  364 (451)
                      ...||+.|+|||++.+.      .++.++|||||||++|||++|          +.||....    ....+.........
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~  255 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ  255 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCC
Confidence            34799999999999886      345799999999999999999          88886532    22333443332221


Q ss_pred             ---CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          365 ---FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       365 ---~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                         .+........+..+.+||.+||+.||++|||    +.||++
T Consensus       256 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~~  295 (301)
T 3q4u_A          256 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT----ALRIKK  295 (301)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC----HHHHHH
T ss_pred             CCCCChhhccCccHHHHHHHHHHHhhcChhhCCC----HHHHHH
Confidence               1111112223347999999999999999999    999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=8.3e-44  Score=341.62  Aligned_cols=258  Identities=20%  Similarity=0.269  Sum_probs=197.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE-
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF-  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~-  158 (451)
                      ++|++.+.||+|+||+||+|.+..+++         .||||++....     ....+..|+.+++.++|++++..+..+ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGE---------EVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCG   74 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTE---------EEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCc---------eEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeec
Confidence            679999999999999999999876665         49999876442     223466799999999988866666555 


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Df  235 (451)
                      ...+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        75 ~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Df  152 (296)
T 4hgt_A           75 AEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred             CCCCceEEEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecC
Confidence            6778999999999 999999987543 459999999999999999999999999999999999999   78899999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++...........                                                ..........||+.|+||
T Consensus       153 g~a~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~y~aP  184 (296)
T 4hgt_A          153 GLAKKYRDARTHQH------------------------------------------------IPYRENKNLTGTARYASI  184 (296)
T ss_dssp             TTCEECBCTTTCCB------------------------------------------------CCCCCSCCCCSCGGGCCH
T ss_pred             ccceeccCcccCcc------------------------------------------------CCCCcccccCCCccccch
Confidence            99854322111000                                                000111235799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE---TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      |++.+..++.++|||||||++|+|++|+.||......   ..+..+.......+........+.++.+||.+||+.||++
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  264 (296)
T 4hgt_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             HHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999864322   2333333322222211111122348999999999999999


Q ss_pred             cCCCCCChHHHHc
Q 013016          393 RLGSKRGAADVKT  405 (451)
Q Consensus       393 Rpt~~~~~~ell~  405 (451)
                      ||+    +.+|++
T Consensus       265 Rpt----~~~l~~  273 (296)
T 4hgt_A          265 KPD----YSYLRQ  273 (296)
T ss_dssp             CCC----HHHHHH
T ss_pred             CCC----HHHHHH
Confidence            999    888875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.4e-44  Score=354.80  Aligned_cols=244  Identities=18%  Similarity=0.229  Sum_probs=190.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC---CCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD---HPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~nIv~l~~  156 (451)
                      ++|.+.++||+|+||+||+|.+......    ..+..||||++....      ...+..|+.+++.++   |+||+.+++
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~----~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDA----KNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-----------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCccc----ccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            6799999999999999999964332111    122359999997542      234556788888886   999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-------
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-------  226 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-------  226 (451)
                      ++...+..|||||||+||+|.+++...   ....+++..++.|+.||+.||+|||++||+||||||+|||++.       
T Consensus       135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~  214 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD  214 (365)
T ss_dssp             EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred             eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence            999999999999999999999998742   3456999999999999999999999999999999999999998       


Q ss_pred             ----CCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          227 ----DGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       227 ----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                          ++.+||+|||++......                                                     .....
T Consensus       215 ~~~~~~~~kl~DFG~a~~~~~~-----------------------------------------------------~~~~~  241 (365)
T 3e7e_A          215 EDDLSAGLALIDLGQSIDMKLF-----------------------------------------------------PKGTI  241 (365)
T ss_dssp             ----CTTEEECCCTTCEEGGGS-----------------------------------------------------CTTEE
T ss_pred             cccccCCEEEeeCchhhhhhcc-----------------------------------------------------CCCce
Confidence                899999999998432100                                                     00111


Q ss_pred             ccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHH
Q 013016          303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI  382 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll  382 (451)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........     .....+.    ....+..+.+++
T Consensus       242 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~  312 (365)
T 3e7e_A          242 FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-----KPEGLFR----RLPHLDMWNEFF  312 (365)
T ss_dssp             ECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----EECSCCT----TCSSHHHHHHHH
T ss_pred             eeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----eechhcc----ccCcHHHHHHHH
Confidence            2235799999999999999999999999999999999999999965322110     0001111    112344789999


Q ss_pred             HHhcccCcCCcCC
Q 013016          383 SGLLNKDPCNRLG  395 (451)
Q Consensus       383 ~~~L~~dP~~Rpt  395 (451)
                      .+||+.+|.+|++
T Consensus       313 ~~~l~~~p~~r~~  325 (365)
T 3e7e_A          313 HVMLNIPDCHHLP  325 (365)
T ss_dssp             HHHHCCCCTTCCC
T ss_pred             HHHcCCCCCCcch
Confidence            9999999999976

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=6.8e-44  Score=350.78  Aligned_cols=265  Identities=19%  Similarity=0.218  Sum_probs=194.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH--------HHHHHHHHHHHHHHHHCCCCCc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK--------KKKVHRAEMEKKILKMLDHPFL  151 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~nI  151 (451)
                      ++|.+.+.||+|+||+||+|.+.....      .+..||||++.......        ......+..|+.+++.++|+||
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni  110 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPE------KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGI  110 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCG------GGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCC------ccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCc
Confidence            679999999999999999999876211      12249999987542111        1112335568889999999999


Q ss_pred             cceeEEEEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          152 PTLYAEFEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       152 v~l~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      +++++++..    .+..|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS
T ss_pred             ceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC
Confidence            999999988    78999999999 999999987653  69999999999999999999999999999999999999988


Q ss_pred             C--CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          228 G--HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       228 ~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      +  .+||+|||++..........                                                .........
T Consensus       188 ~~~~~kL~Dfg~a~~~~~~~~~~------------------------------------------------~~~~~~~~~  219 (345)
T 2v62_A          188 NPDQVYLADYGLSYRYCPNGNHK------------------------------------------------QYQENPRKG  219 (345)
T ss_dssp             STTSEEECCCTTCEESSGGGCCC------------------------------------------------CCCCCGGGC
T ss_pred             CCCcEEEEeCCCceecccccccc------------------------------------------------cchhccccc
Confidence            7  99999999985432110000                                                000111123


Q ss_pred             cccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcC-CCCCCC----CCCCCcChHHHH
Q 013016          306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKK-PLTFPT----QSPSSMSEYHAR  379 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~-~~~~~~----~~~~~~~~~~~~  379 (451)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ........... ....+.    .......+.++.
T Consensus       220 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  299 (345)
T 2v62_A          220 HNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIA  299 (345)
T ss_dssp             SCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHH
T ss_pred             cCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHH
Confidence            479999999999999889999999999999999999999996522 22211111111 111111    001112344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +||.+||+.||++||+    +.+|++
T Consensus       300 ~li~~~l~~dp~~Rps----~~~l~~  321 (345)
T 2v62_A          300 QFLVCAHSLAYDEKPN----YQALKK  321 (345)
T ss_dssp             HHHHHHHTCCTTCCCC----HHHHHH
T ss_pred             HHHHHHhhcCcccCCC----HHHHHH
Confidence            9999999999999999    888875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.4e-44  Score=353.03  Aligned_cols=264  Identities=16%  Similarity=0.205  Sum_probs=200.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccc------
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPT------  153 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~------  153 (451)
                      ++|.+.+.||+|+||.||+|.+..+.... ....+..||||++...        ..+.+|+.++++++||||++      
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~-~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~  112 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCD-SGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY  112 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC------------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCcccc-ccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence            68999999999999999999988642100 0001224999999754        34567999999999998887      


Q ss_pred             ---------eeEEEEe-CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 013016          154 ---------LYAEFEA-SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL  223 (451)
Q Consensus       154 ---------l~~~~~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIl  223 (451)
                               +++++.. ++..|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl  191 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF  191 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred             cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence                     6777776 77999999999 999999998765567999999999999999999999999999999999999


Q ss_pred             EccCC--CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          224 VRSDG--HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       224 l~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ++.++  .+||+|||++...........                                                ....
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------------------------------------------------~~~~  223 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVA------------------------------------------------YVEG  223 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCC------------------------------------------------CCTT
T ss_pred             EcCCCCceEEEecCcceeeccCCCcccc------------------------------------------------cccc
Confidence            99998  999999999854321110000                                                0001


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHh----cCCCCCCCCC-CCCcCh
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIV----KKPLTFPTQS-PSSMSE  375 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~-~~~~~~~i~----~~~~~~~~~~-~~~~~~  375 (451)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ....+....    .....+.... .....+
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (352)
T 2jii_A          224 SRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPS  303 (352)
T ss_dssp             SSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCC
T ss_pred             ccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCc
Confidence            1123479999999999999899999999999999999999999998754 233222222    2222211111 001224


Q ss_pred             HHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          376 YHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       376 ~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .++.+||.+||+.||.+||+    +.+|++
T Consensus       304 ~~l~~li~~~l~~dp~~Rps----~~~l~~  329 (352)
T 2jii_A          304 ETLQKYLKVVMALTYEEKPP----YAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHHTCCTTCCCC----HHHHHH
T ss_pred             HHHHHHHHHHHhCChhhCCC----HHHHHH
Confidence            48999999999999999999    888865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.1e-43  Score=345.26  Aligned_cols=255  Identities=19%  Similarity=0.266  Sum_probs=199.9

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      |++.++||+|+||+||+|.++....     ..+..||||++....  .......+.+|+.++++++||||+++++++.+.
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTND-----GTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA  105 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC-------CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HhhhheecCCCCeEEEEEEEccCCC-----CCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence            5999999999999999987653321     233469999998652  233456678899999999999999999999874


Q ss_pred             --CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          162 --NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       162 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                        ..+++||||+++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          106 GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence              6899999999999999999764   39999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                    .........||..|+|||++.
T Consensus       183 ~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  210 (318)
T 3lxp_A          183 AVPEGHE----------------------------------------------------YYRVREDGDSPVFWYAPECLK  210 (318)
T ss_dssp             ECCTTCS----------------------------------------------------EEEC---CCCCGGGCCHHHHH
T ss_pred             ccccccc----------------------------------------------------ccccccCCCCCceeeChHHhc
Confidence            3321100                                                    000111236788899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHh
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE--------------TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL  385 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~--------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~  385 (451)
                      +..++.++|||||||++|+|++|..||......              ..+..........+.   +...+.++.+||.+|
T Consensus       211 ~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~  287 (318)
T 3lxp_A          211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR---PDKCPAEVYHLMKNC  287 (318)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCC---CccccHHHHHHHHHH
Confidence            988999999999999999999999999754221              112222222211111   122344899999999


Q ss_pred             cccCcCCcCCCCCChHHHHc
Q 013016          386 LNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       386 L~~dP~~Rpt~~~~~~ell~  405 (451)
                      |+.||.+||+    +.||++
T Consensus       288 l~~dP~~Rps----~~ell~  303 (318)
T 3lxp_A          288 WETEASFRPT----FENLIP  303 (318)
T ss_dssp             TCSSGGGSCC----HHHHHH
T ss_pred             cCCCcccCcC----HHHHHH
Confidence            9999999999    999884

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.7e-44  Score=347.32  Aligned_cols=275  Identities=21%  Similarity=0.248  Sum_probs=208.0

Q ss_pred             CchhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH-HHHHHHHHHH
Q 013016           59 SDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-EKKKKVHRAE  137 (451)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~  137 (451)
                      ..|++.++..++......   ..|...++||+|+||+||+|.+.+.           .||||++..... ........+.
T Consensus        13 ~~~~~~~l~~~~~~f~~~---~~~~~~~~lg~G~~g~Vy~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~   78 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDER---PISVGGNKMGEGGFGVVYKGYVNNT-----------TVAVKKLAAMVDITTEELKQQFD   78 (307)
T ss_dssp             EECCHHHHHHHTTTTCCS---BTTTTCCEEEECSSEEEEEEESSSC-----------EEEEEEECCCTTSCTTTHHHHHH
T ss_pred             CcccHHHHHHHHcccccc---cccccCCccccCCCeEEEEEEECCc-----------eEEEEEEecccCcchHHHHHHHH
Confidence            346777888777221111   2244558999999999999987432           399999865321 1223456677


Q ss_pred             HHHHHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 013016          138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRD  216 (451)
Q Consensus       138 ~e~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~D  216 (451)
                      +|+.+++.++||||+++++++...+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|||
T Consensus        79 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  158 (307)
T 2nru_A           79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD  158 (307)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence            89999999999999999999999999999999999999999887432 35699999999999999999999999999999


Q ss_pred             CCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccc
Q 013016          217 LKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVA  296 (451)
Q Consensus       217 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (451)
                      |||+|||++.++.+||+|||++.......                                                   
T Consensus       159 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------  187 (307)
T 2nru_A          159 IKSANILLDEAFTAKISDFGLARASEKFA---------------------------------------------------  187 (307)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCSCS---------------------------------------------------
T ss_pred             CCHHHEEEcCCCcEEEeeccccccccccc---------------------------------------------------
Confidence            99999999999999999999985322100                                                   


Q ss_pred             ccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHhcCCCCC------C
Q 013016          297 EPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET----TLRNIVKKPLTF------P  366 (451)
Q Consensus       297 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~----~~~~i~~~~~~~------~  366 (451)
                        .........||+.|+|||++.+ .++.++|||||||++|+|++|..||.......    ....+......+      .
T Consensus       188 --~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (307)
T 2nru_A          188 --QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK  264 (307)
T ss_dssp             --SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS
T ss_pred             --ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc
Confidence              0011123478999999998876 57899999999999999999999998754322    122222211110      0


Q ss_pred             CCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       367 ~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ........+..+.+++.+||+.||.+||+    +.+|++
T Consensus       265 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~l~~  299 (307)
T 2nru_A          265 MNDADSTSVEAMYSVASQCLHEKKNKRPD----IKKVQQ  299 (307)
T ss_dssp             CSCCCHHHHHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence            01111223347899999999999999999    999886

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5e-44  Score=348.88  Aligned_cols=260  Identities=21%  Similarity=0.314  Sum_probs=202.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+.....     ..+..||||++....   ......+.+|+.++++++|+||++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~   92 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGD-----NTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGV   92 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSS-----SCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCC-----CcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEE
Confidence            34789999999999999999998542211     123369999997552   2334567789999999999999999998


Q ss_pred             EE--eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~--~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +.  ..+..|+||||++|++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Df  171 (327)
T 3lxl_A           93 SYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF  171 (327)
T ss_dssp             EECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCG
T ss_pred             EecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccc
Confidence            86  4567999999999999999987642 35999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++........                                                    .........||..|+||
T Consensus       172 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aP  199 (327)
T 3lxl_A          172 GLAKLLPLDKD----------------------------------------------------YYVVREPGQSPIFWYAP  199 (327)
T ss_dssp             GGCEECCTTCS----------------------------------------------------EEECSSCCCSCGGGSCH
T ss_pred             ccceecccCCc----------------------------------------------------cceeeccCCccccccCH
Confidence            99853321100                                                    00011123688889999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE--------------TTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~--------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      |++.+..++.++|||||||++|+|++|+.||......              ..+..........+.   +...+.++.+|
T Consensus       200 E~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l  276 (327)
T 3lxl_A          200 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA---PPACPAEVHEL  276 (327)
T ss_dssp             HHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC---CTTCCHHHHHH
T ss_pred             HHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC---CCcccHHHHHH
Confidence            9999888999999999999999999999998653322              112222222211111   22234489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHc
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      |.+||+.||.+|||    +.||++
T Consensus       277 i~~~l~~dP~~Rps----~~ell~  296 (327)
T 3lxl_A          277 MKLCWAPSPQDRPS----FSALGP  296 (327)
T ss_dssp             HHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHcCCChhhCcC----HHHHHH
Confidence            99999999999999    888854

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.1e-43  Score=373.40  Aligned_cols=255  Identities=21%  Similarity=0.256  Sum_probs=203.3

Q ss_pred             CCceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           80 RDFDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ..+.+. ++||+|+||+||+|.+.....       +..||||++..... .....+.+.+|+.++++++|||||++++++
T Consensus       368 ~~~~l~~~~LG~G~fG~Vy~~~~~~~~~-------~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~  439 (635)
T 4fl3_A          368 KLLTLEDKELGSGNFGTVKKGYYQMKKV-------VKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC  439 (635)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSC-------EEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhccccCCEeccCCCEEEEEEEEcCCCc-------ceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            345543 489999999999997653321       12499999976532 233456788899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .. +..++||||+++|+|.+++...  ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||++
T Consensus       440 ~~-~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla  516 (635)
T 4fl3_A          440 EA-ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS  516 (635)
T ss_dssp             ES-SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHH
T ss_pred             ec-CCEEEEEEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCc
Confidence            64 5688999999999999999765  55999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                    .........||+.|+|||++
T Consensus       517 ~~~~~~~~----------------------------------------------------~~~~~~~~~~t~~y~APE~~  544 (635)
T 4fl3_A          517 KALRADEN----------------------------------------------------YYKAQTHGKWPVKWYAPECI  544 (635)
T ss_dssp             HHTTC-----------------------------------------------------------------CGGGSCHHHH
T ss_pred             cccccCcc----------------------------------------------------ccccccCCCCceeeeChhhh
Confidence            54321100                                                    00011122567889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||+||||++ |+.||.+....+....+..+.....    +...+.++.+||.+||+.||++||+  
T Consensus       545 ~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~dP~~RPs--  618 (635)
T 4fl3_A          545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC----PAGCPREMYDLMNLCWTYDVENRPG--  618 (635)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSTTTSCC--
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCCHhHCcC--
Confidence            99999999999999999999998 9999999988888887776643211    1223448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.+|++
T Consensus       619 --~~~l~~  624 (635)
T 4fl3_A          619 --FAAVEL  624 (635)
T ss_dssp             --HHHHHH
T ss_pred             --HHHHHH
Confidence              888864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-44  Score=356.54  Aligned_cols=259  Identities=15%  Similarity=0.210  Sum_probs=200.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ..|.+.+.||+|+||+||+|.+.....      ....||+|++...  ........+.+|+.++++++||||+++++++.
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~------~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~  160 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL  160 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTT------EEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCC------cEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            458999999999999999999764321      1224899998753  22344567788999999999999999999875


Q ss_pred             -eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          160 -ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       160 -~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                       .++..|+||||+++|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       161 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a  239 (373)
T 3c1x_A          161 RSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  239 (373)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             cCCCCeEEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccc
Confidence             456889999999999999999764 345899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      .........                                                   .........||+.|+|||++
T Consensus       240 ~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~aPE~~  268 (373)
T 3c1x_A          240 RDMYDKEFD---------------------------------------------------SVHNKTGAKLPVKWMALESL  268 (373)
T ss_dssp             ---------------------------------------------------------------------CCGGGSCHHHH
T ss_pred             ccccccccc---------------------------------------------------cccccCCCCCcccccChHHh
Confidence            532110000                                                   00011123577889999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||++ |..||......+....+..+.....    +...+..+.+++.+||+.||++||+  
T Consensus       269 ~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~----p~~~~~~l~~li~~cl~~dp~~RPs--  342 (373)
T 3c1x_A          269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLYEVMLKCWHPKAEMRPS--  342 (373)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCChhhCcC--
Confidence            99999999999999999999999 7888988776666666666543222    1223448999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.|++++
T Consensus       343 --~~ell~~  349 (373)
T 3c1x_A          343 --FSELVSR  349 (373)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHHH
Confidence              8888763

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.1e-43  Score=341.00  Aligned_cols=258  Identities=20%  Similarity=0.271  Sum_probs=199.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE-
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF-  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~-  158 (451)
                      ++|.+.+.||+|+||.||+|.+..+++         .||||++....     ....+.+|+.+++.+.|++++..+..+ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGE---------EVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCG   74 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTE---------EEEEEEEESCS-----SCCHHHHHHHHHHHHTTSTTCCCEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCc---------EEEEEEecCCc-----chhHHHHHHHHHHHhhcCCCCCcccccc
Confidence            789999999999999999999876655         49999986542     224567799999999988866555544 


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Df  235 (451)
                      ...+..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+||
T Consensus        75 ~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df  152 (296)
T 3uzp_A           75 AEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             CCCCceEEEEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence            6778899999999 999999997543 469999999999999999999999999999999999999   48899999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++...........                                                ..........||+.|+||
T Consensus       153 g~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~y~aP  184 (296)
T 3uzp_A          153 GLAKKYRDARTHQH------------------------------------------------IPYRENKNLTGTARYASI  184 (296)
T ss_dssp             TTCEECBCTTTCCB------------------------------------------------CCCCCSCCCCSCTTTCCH
T ss_pred             CCcccccccccccc------------------------------------------------cccccccccccccccCCh
Confidence            99854322111000                                                000111235799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS---NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      |++.+..++.++|||||||++|+|++|+.||....   ....+..+.......+........+.++.+|+.+||+.||.+
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  264 (296)
T 3uzp_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCc
Confidence            99999999999999999999999999999998743   223333333322222211111123348999999999999999


Q ss_pred             cCCCCCChHHHHc
Q 013016          393 RLGSKRGAADVKT  405 (451)
Q Consensus       393 Rpt~~~~~~ell~  405 (451)
                      ||+    +.+|++
T Consensus       265 Rps----~~~l~~  273 (296)
T 3uzp_A          265 KPD----YSYLRQ  273 (296)
T ss_dssp             CCC----HHHHHH
T ss_pred             CCC----HHHHHH
Confidence            999    888775

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=4.2e-45  Score=382.80  Aligned_cols=277  Identities=24%  Similarity=0.351  Sum_probs=211.5

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|.+.++||.|+||+||+|.+..+++         .||||++....  .......+.+|+.++++++||||++++++
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~---------~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v   80 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGE---------QVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREV   80 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTC---------CEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEEC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCc---------EEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeee
Confidence            34789999999999999999999876655         39999987542  23345667789999999999999999998


Q ss_pred             EEe------CCeEEEEEeeccCCchhhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCC-
Q 013016          158 FEA------SNFSCIVMEFCSGGDLHSLRHKQP-HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH-  229 (451)
Q Consensus       158 ~~~------~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~-  229 (451)
                      +..      ++..|+||||++||+|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++. 
T Consensus        81 ~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~  160 (676)
T 3qa8_A           81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR  160 (676)
T ss_dssp             CTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSS
T ss_pred             ecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCc
Confidence            765      678899999999999999998753 336999999999999999999999999999999999999997765 


Q ss_pred             --EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          230 --IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       230 --~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                        +||+|||++......                                                        .......
T Consensus       161 ~~vKL~DFG~a~~~~~~--------------------------------------------------------~~~~~~~  184 (676)
T 3qa8_A          161 LIHKIIDLGYAKELDQG--------------------------------------------------------ELCTEFV  184 (676)
T ss_dssp             CEEEECSCCCCCBTTSC--------------------------------------------------------CCCCCCC
T ss_pred             eeEEEcccccccccccc--------------------------------------------------------ccccccc
Confidence              999999998532210                                                        0111347


Q ss_pred             cCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---------H-----hcCCCCCCCC-----
Q 013016          308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN---------I-----VKKPLTFPTQ-----  368 (451)
Q Consensus       308 gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~---------i-----~~~~~~~~~~-----  368 (451)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..||...........         +     ..+...+...     
T Consensus       185 gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~  264 (676)
T 3qa8_A          185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN  264 (676)
T ss_dssp             SCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSC
T ss_pred             CCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCch
Confidence            89999999999999999999999999999999999999976433221110         0     1111111111     


Q ss_pred             CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCC
Q 013016          369 SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI  425 (451)
Q Consensus       369 ~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~  425 (451)
                      ......+..+.+||.+||++||++|||    +.++++||||++++..+.......+.
T Consensus       265 ~l~~~ls~~L~dLI~~mL~~DP~kRPT----a~elL~hp~F~~l~~iL~~kil~~f~  317 (676)
T 3qa8_A          265 HLSGILAGKLERWLQCMLMWHQRQRGT----DPQNPNVGCFQALDSILSLKLLSVMN  317 (676)
T ss_dssp             CCCGGGHHHHHHHHHHHSCSSCC---C----CTTCCCCTTHHHHHHHHCCCEEECCC
T ss_pred             hhchhhhHHHHHHHHHHccCCHhhCcC----HHHHhcCHHHHHHHHHHhcccccccc
Confidence            111224558999999999999999999    99999999999976665554433333

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-43  Score=345.96  Aligned_cols=260  Identities=23%  Similarity=0.319  Sum_probs=181.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      .+|++.++||+|+||.||+|.+..+++         .||||++....   ......+.+|+.+++++. ||||+++++++
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~   95 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGR---------EYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAA   95 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCC---------EEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCc---------EEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhccccc
Confidence            579999999999999999999877665         49999986542   233456677999999996 99999999999


Q ss_pred             E--------eCCeEEEEEeeccCCchhhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEccC
Q 013016          159 E--------ASNFSCIVMEFCSGGDLHSLRHK-QPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRSD  227 (451)
Q Consensus       159 ~--------~~~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~~~  227 (451)
                      .        ....+++||||+ +|+|.+++.. ...+.+++..++.++.||+.||.|||++|  |+||||||+|||++.+
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~  174 (337)
T 3ll6_A           96 SIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ  174 (337)
T ss_dssp             EECTTTSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT
T ss_pred             cccccccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC
Confidence            4        345689999999 5899888765 23456999999999999999999999999  9999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +.+||+|||++.............                                           .............
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~  211 (337)
T 3ll6_A          175 GTIKLCDFGSATTISHYPDYSWSA-------------------------------------------QRRALVEEEITRN  211 (337)
T ss_dssp             SCEEBCCCTTCBCCSSCC--------------------------------------------------------------
T ss_pred             CCEEEecCccceeccccCcccccc-------------------------------------------cccccchhhcccc
Confidence            999999999986433211100000                                           0000001112347


Q ss_pred             cCCCccCcccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          308 GTHEYVSPEVA---SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       308 gt~~y~aPE~~---~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      ||+.|+|||++   .+..++.++|||||||++|+|++|+.||..........    .....+..   ...+..+.+||.+
T Consensus       212 ~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~li~~  284 (337)
T 3ll6_A          212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN----GKYSIPPH---DTQYTVFHSLIRA  284 (337)
T ss_dssp             ------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTT---CCSSGGGHHHHHH
T ss_pred             CCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc----CcccCCcc---cccchHHHHHHHH
Confidence            89999999998   56678999999999999999999999997654433322    22222211   1122278999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcC
Q 013016          385 LLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ||+.||.+||+    +.|+++|
T Consensus       285 ~l~~~p~~Rps----~~e~l~~  302 (337)
T 3ll6_A          285 MLQVNPEERLS----IAEVVHQ  302 (337)
T ss_dssp             HSCSSGGGSCC----HHHHHHH
T ss_pred             HccCChhhCcC----HHHHHHH
Confidence            99999999999    9999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.4e-43  Score=362.70  Aligned_cols=270  Identities=19%  Similarity=0.277  Sum_probs=209.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC-CCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH-PFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~nIv~l~~~~  158 (451)
                      ++|.+.++||+|+||.||+|.+..+++         .||||++....     ....+..|+.+++.+.| ++|+.+..++
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~---------~vAvK~~~~~~-----~~~~~~~E~~il~~L~~~~~i~~i~~~~   72 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNE---------EVAIKLENVKT-----KHPQLLYESKIYRILQGGTGIPNVRWFG   72 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCC---------EEEEEEEETTC-----SSCCHHHHHHHHHHTTTSTTCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCc---------EEEEEEecccc-----ccHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            789999999999999999999876655         49999987542     22346679999999986 5566777777


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE---ccCCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Df  235 (451)
                      ...+..||||||+ +++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+||||   +.++.+||+||
T Consensus        73 ~~~~~~~lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF  150 (483)
T 3sv0_A           73 VEGDYNVLVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF  150 (483)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred             eeCCEEEEEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeC
Confidence            8888999999999 999999997643 459999999999999999999999999999999999999   68899999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++...........                                                .........+||+.|+||
T Consensus       151 Gla~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          151 GLAKKYRDTSTHQH------------------------------------------------IPYRENKNLTGTARYASV  182 (483)
T ss_dssp             TTCEECBCTTTCCB------------------------------------------------CCCCCCCCCCSCTTTCCH
T ss_pred             CcceeccCCccccc------------------------------------------------cccccccccCCCccccCH
Confidence            99864332111000                                                000111245899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN---ETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      |++.+..++.++|||||||+||+|++|+.||.....   ...+..+................+.++.+||.+||+.||++
T Consensus       183 E~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~  262 (483)
T 3sv0_A          183 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDD  262 (483)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTC
T ss_pred             HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhh
Confidence            999999999999999999999999999999987443   33333333322111110000122348999999999999999


Q ss_pred             cCCCCCChHHHHc----------CCCcCCCCcccc
Q 013016          393 RLGSKRGAADVKT----------HPFFKGLNFALI  417 (451)
Q Consensus       393 Rpt~~~~~~ell~----------hp~~~~~~~~~~  417 (451)
                      ||+    +.+|++          ++|+..++|...
T Consensus       263 RPs----~~el~~~L~~l~~~~~~~~~~~~dW~~~  293 (483)
T 3sv0_A          263 KPD----YSYLKRLFRDLFIREGFQFDYVFDWTIL  293 (483)
T ss_dssp             CCC----HHHHHHHHHHHHHHTTCCCSSCCHHHHH
T ss_pred             CcC----HHHHHHHHHHHHHHcCCCccCCcCchhh
Confidence            999    665543          789988898755

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-43  Score=345.00  Aligned_cols=252  Identities=23%  Similarity=0.316  Sum_probs=192.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH--CCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM--LDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~nIv~l~~~  157 (451)
                      ++|++.++||+|+||.||+|.+.+.           .||||++.....      .....|.+++..  ++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~-----------~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~   99 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGE-----------KVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAA   99 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTE-----------EEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEECCc-----------eEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEE
Confidence            6799999999999999999987632           499999965421      222334455444  489999999999


Q ss_pred             EEeC----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCCcEEEc
Q 013016          158 FEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML--------GIIYRDLKPENVLVR  225 (451)
Q Consensus       158 ~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------givH~Dlkp~NIll~  225 (451)
                      +...    +.+|+||||+++|+|.+++...   .+++..++.++.||+.||+|||++        ||+||||||+|||++
T Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~  176 (337)
T 3mdy_A          100 DIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK  176 (337)
T ss_dssp             EEESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred             EccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence            9887    7899999999999999999764   599999999999999999999998        999999999999999


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.+||+|||++.........                                                   .......
T Consensus       177 ~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------------~~~~~~~  205 (337)
T 3mdy_A          177 KNGTCCIADLGLAVKFISDTNE---------------------------------------------------VDIPPNT  205 (337)
T ss_dssp             TTSCEEECCCTTCEECC------------------------------------------------------------CCS
T ss_pred             CCCCEEEEeCCCceeecccccc---------------------------------------------------ccCCCCC
Confidence            9999999999998532211000                                                   0001123


Q ss_pred             cccCCCccCcccccCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCCC----hHHHHHHHhcCC---
Q 013016          306 FVGTHEYVSPEVASGGSHGNA------VDWWAFGIFIYEMIYG----------RTPFAAPS----NETTLRNIVKKP---  362 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~~~~~------~DIwSlG~il~elltg----------~~pf~~~~----~~~~~~~i~~~~---  362 (451)
                      .+||+.|+|||++.+..++..      +|||||||++|||++|          +.||....    ....+.......   
T Consensus       206 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (337)
T 3mdy_A          206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR  285 (337)
T ss_dssp             SCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             CccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccC
Confidence            479999999999988776554      9999999999999999          77776532    222333333221   


Q ss_pred             CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ..++........+.++.+||.+||+.||.+|||    +.||++|
T Consensus       286 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~  325 (337)
T 3mdy_A          286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLT----ALRVKKT  325 (337)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHHHhhhhChhhCCC----HHHHHHH
Confidence            122222122233447899999999999999999    9999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.1e-43  Score=347.54  Aligned_cols=267  Identities=26%  Similarity=0.326  Sum_probs=192.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+.+++|++.++||+|+||+||+|.+.+.           .||||++......    ....+.|+..+..++|+||++++
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----------~vavK~~~~~~~~----~~~~e~~~~~~~~~~h~~i~~~~   73 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSLDER-----------PVAVKVFSFANRQ----NFINEKNIYRVPLMEHDNIARFI   73 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEETTE-----------EEEEEEEEGGGHH----HHHHHHHHHTSTTCCCTTBCCEE
T ss_pred             CcChHHhheeeecccCCCeEEEEEEECCe-----------EEEEEEeeccchh----hHHHHHHHHHHHhccCcchhhhe
Confidence            34558999999999999999999977432           4999999754221    11112344445568999999999


Q ss_pred             EEEEe-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeccCCCCc
Q 013016          156 AEFEA-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML---------GIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---------givH~Dlkp~N  221 (451)
                      +.+..     ...+|+||||+++|+|.+++...   ..++..+..++.||+.||.|||++         ||+||||||+|
T Consensus        74 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~N  150 (336)
T 3g2f_A           74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN  150 (336)
T ss_dssp             EEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGG
T ss_pred             ecccccccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccce
Confidence            86642     33789999999999999999764   358999999999999999999999         99999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++..........                                               ......
T Consensus       151 ill~~~~~~kL~DFG~a~~~~~~~~~~-----------------------------------------------~~~~~~  183 (336)
T 3g2f_A          151 VLVKNDGTCVISDFGLSMRLTGNRLVR-----------------------------------------------PGEEDN  183 (336)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCC------------------------------------------------------
T ss_pred             EEEcCCCcEEEeeccceeecccccccC-----------------------------------------------cccccc
Confidence            999999999999999986433211100                                               000111


Q ss_pred             cccccccCCCccCcccccC-------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----------------hHHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASG-------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-----------------NETTLRN  357 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DIwSlG~il~elltg~~pf~~~~-----------------~~~~~~~  357 (451)
                      .....+||+.|+|||++.+       ..++.++|||||||++|||++|..||....                 ....+..
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T 3g2f_A          184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQV  263 (336)
T ss_dssp             --CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHH
T ss_pred             ccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHh
Confidence            1223479999999999987       345678999999999999999977763321                 1122222


Q ss_pred             HhcCC---CCCCCCCCC-CcChHHHHHHHHHhcccCcCCcCCCCCChHHH------HcCCCcCC
Q 013016          358 IVKKP---LTFPTQSPS-SMSEYHARDLISGLLNKDPCNRLGSKRGAADV------KTHPFFKG  411 (451)
Q Consensus       358 i~~~~---~~~~~~~~~-~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~el------l~hp~~~~  411 (451)
                      .....   ..++..... ...+.++.+||.+||+.||++|||    +.|+      +.++|-++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          264 LVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT----AQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCC----HHHHHHHHHHHHHCCCC-
T ss_pred             hhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcc----hHHHHHHHHHHHHHHHhc
Confidence            22221   222221111 123347999999999999999999    8888      55677766

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5.7e-43  Score=339.59  Aligned_cols=262  Identities=20%  Similarity=0.300  Sum_probs=198.3

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|.+.+.||+|+||.||+|.+..+++         .||||++....   ......+.+|+.+++.++||||+++++++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---------~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGH---------FYALKRILCHE---QQDREEAQREADMHRLFNHPNILRLVAYC   95 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCC---------EEEEEEEEESS---HHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCc---------EEEEEEEecCC---HHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3679999999999999999999876655         49999986532   23445677899999999999999999998


Q ss_pred             E----eCCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          159 E----ASNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       159 ~----~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      .    .....|+||||+.+++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl  175 (317)
T 2buj_A           96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL  175 (317)
T ss_dssp             EEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEE
Confidence            7    335889999999999999988753  3466999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++........                      ....                        ...........||+.|
T Consensus       176 ~dfg~~~~~~~~~~----------------------~~~~------------------------~~~~~~~~~~~gt~~y  209 (317)
T 2buj_A          176 MDLGSMNQACIHVE----------------------GSRQ------------------------ALTLQDWAAQRCTISY  209 (317)
T ss_dssp             CCCSSCEESCEEEE----------------------SHHH------------------------HHHHHHHHHHHSCGGG
T ss_pred             EecCcchhcccccc----------------------cccc------------------------cccccccccccCCccc
Confidence            99998742210000                      0000                        0000001123679999


Q ss_pred             cCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcc
Q 013016          313 VSPEVASGGS---HGNAVDWWAFGIFIYEMIYGRTPFAAPS--NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLN  387 (451)
Q Consensus       313 ~aPE~~~~~~---~~~~~DIwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~  387 (451)
                      +|||++.+..   ++.++|||||||++|+|++|+.||....  .......+ ......+.   ....+..+.+||.+||+
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~l~~li~~~l~  285 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-QNQLSIPQ---SPRHSSALWQLLNSMMT  285 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-HCC--CCC---CTTSCHHHHHHHHHHTC
T ss_pred             CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-hccCCCCc---cccCCHHHHHHHHHHhh
Confidence            9999987654   6889999999999999999999996411  11112222 22222222   12234489999999999


Q ss_pred             cCcCCcCCCCCChHHHHcC
Q 013016          388 KDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       388 ~dP~~Rpt~~~~~~ell~h  406 (451)
                      .||.+||+    +.+++++
T Consensus       286 ~dp~~Rps----~~~ll~~  300 (317)
T 2buj_A          286 VDPHQRPH----IPLLLSQ  300 (317)
T ss_dssp             SSGGGSCC----HHHHHHH
T ss_pred             cChhhCCC----HHHHHHH
Confidence            99999999    9999874

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1e-43  Score=344.95  Aligned_cols=258  Identities=19%  Similarity=0.265  Sum_probs=204.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|++.+.||+|+||.||+|.++..            +|+|++..... .......+.+|+.++++++|+||++++
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~------------~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~   95 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHGE------------VAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFM   95 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESSS------------EEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcCe------------EEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEE
Confidence            34458899999999999999999987642            89999975421 122234456689999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++...+..++||||++|++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ ++.+||+||
T Consensus        96 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Df  173 (319)
T 2y4i_B           96 GACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDF  173 (319)
T ss_dssp             EEEECSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCC
T ss_pred             EEEecCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeec
Confidence            99999999999999999999999987643 4699999999999999999999999999999999999998 789999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                  ..........|++.|+||
T Consensus       174 g~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~g~~~y~aP  203 (319)
T 2y4i_B          174 GLFSISGVLQAG--------------------------------------------------RREDKLRIQNGWLCHLAP  203 (319)
T ss_dssp             SCCC------------------------------------------------------------CCSCBCCSGGGGTSCH
T ss_pred             CCcccccccccc--------------------------------------------------ccccccccCCCcccccCh
Confidence            997432110000                                                  000111123689999999


Q ss_pred             ccccC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          316 EVASG---------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       316 E~~~~---------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      |++.+         ..++.++|||||||++|+|++|+.||...........+..+.......  . ..+.++.+|+.+||
T Consensus       204 E~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~li~~~l  280 (319)
T 2y4i_B          204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--I-GMGKEISDILLFCW  280 (319)
T ss_dssp             HHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCC--S-SCCTTHHHHHHHHH
T ss_pred             HHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCc--C-CCCHHHHHHHHHHh
Confidence            99875         347889999999999999999999999988888777776654332211  1 12237999999999


Q ss_pred             ccCcCCcCCCCCChHHHHc
Q 013016          387 NKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.||.+|||    +.++++
T Consensus       281 ~~~p~~Rpt----~~~l~~  295 (319)
T 2y4i_B          281 AFEQEERPT----FTKLMD  295 (319)
T ss_dssp             CSSTTTSCC----HHHHHH
T ss_pred             cCChhhCcC----HHHHHH
Confidence            999999999    999886

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.4e-44  Score=361.47  Aligned_cols=256  Identities=16%  Similarity=0.178  Sum_probs=195.9

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC-CCcc----
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH-PFLP----  152 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~nIv----  152 (451)
                      ...+|...+.||+|+||+||+|.+..+++         .||||++...........+.+.+|+.+++.+.| .|+.    
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~---------~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~  146 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGE---------SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV  146 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHH
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCC---------ceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence            33569999999999999999999887665         399999984433344445667789999999977 2211    


Q ss_pred             -----c------------eeEEEEe-----CCeEEEEEeeccCCchhhhhh-----hCCCCCCCHHHHHHHHHHHHHHHH
Q 013016          153 -----T------------LYAEFEA-----SNFSCIVMEFCSGGDLHSLRH-----KQPHKRFSLTSARFYAAEVLVALE  205 (451)
Q Consensus       153 -----~------------l~~~~~~-----~~~~~lV~E~~~ggsL~~~l~-----~~~~~~l~~~~~~~i~~qil~aL~  205 (451)
                           .            ++.++..     ....+++|+++ +++|.+++.     ......+++..+..++.||+.||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  225 (413)
T 3dzo_A          147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLA  225 (413)
T ss_dssp             HTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHH
Confidence                 1            1111111     22568888877 899999885     223445888899999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccc
Q 013016          206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKI  285 (451)
Q Consensus       206 ~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (451)
                      |||++||+||||||+||||+.++.+||+|||++.....                                          
T Consensus       226 ~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------------------  263 (413)
T 3dzo_A          226 SLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------------------  263 (413)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE------------------------------------------
T ss_pred             HHHhCCcccCCcccceEEEecCCeEEEEeccceeecCC------------------------------------------
Confidence            99999999999999999999999999999999743210                                          


Q ss_pred             cccCCCcccccccccccccccccCCCccCcccc----------cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013016          286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA----------SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL  355 (451)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~  355 (451)
                                      .....+| +.|+|||++          .+..++.++|||||||++|+|++|+.||.........
T Consensus       264 ----------------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~  326 (413)
T 3dzo_A          264 ----------------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS  326 (413)
T ss_dssp             ----------------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS
T ss_pred             ----------------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH
Confidence                            0123478 899999999          5556888999999999999999999999876655444


Q ss_pred             HHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       356 ~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      ..+.....        . .+.++.+||.+||+.||++||+    +.++++||||+++...
T Consensus       327 ~~~~~~~~--------~-~~~~~~~li~~~l~~dP~~Rpt----~~~~l~~~~~~~~~~~  373 (413)
T 3dzo_A          327 EWIFRSCK--------N-IPQPVRALLEGFLRYPKEDRLL----PLQAMETPEYEQLRTE  373 (413)
T ss_dssp             GGGGSSCC--------C-CCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHHHH
T ss_pred             HHHHhhcc--------c-CCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHHHHHHH
Confidence            44433221        1 2348999999999999999999    9999999999986553

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.4e-42  Score=365.49  Aligned_cols=255  Identities=24%  Similarity=0.352  Sum_probs=208.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|.+.+.||+|+||+||+|.+.....      .+..||||++....  .....+.+..|+.++++++||||++++++
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~------~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~  459 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPEN------PAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGV  459 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSS------CCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCC------ccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            34789999999999999999999865432      23469999987542  23344667789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +. .+..|+||||+++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       460 ~~-~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~  537 (656)
T 2j0j_A          460 IT-ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  537 (656)
T ss_dssp             EC-SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred             Ee-cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCC
Confidence            85 567899999999999999997653 4589999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      +.......                                                      ........||+.|+|||+
T Consensus       538 a~~~~~~~------------------------------------------------------~~~~~~~~~t~~y~aPE~  563 (656)
T 2j0j_A          538 SRYMEDST------------------------------------------------------YYKASKGKLPIKWMAPES  563 (656)
T ss_dssp             CCSCCC----------------------------------------------------------------CCGGGCCHHH
T ss_pred             CeecCCCc------------------------------------------------------ceeccCCCCCcceeCHHH
Confidence            85322110                                                      000112256788999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCC-CCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLT-FPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      +.+..++.++|||||||++|||++ |..||.+....+.+..+..+... .+.     ..+..+.+||.+||+.||.+||+
T Consensus       564 ~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~l~~li~~~l~~dP~~RPs  638 (656)
T 2j0j_A          564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP-----NCPPTLYSLMTKCWAYDPSRRPR  638 (656)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT-----TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc-----cccHHHHHHHHHHcCCChhHCcC
Confidence            998899999999999999999997 99999998888888777765432 222     23448999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +.+|++
T Consensus       639 ----~~el~~  644 (656)
T 2j0j_A          639 ----FTELKA  644 (656)
T ss_dssp             ----HHHHHH
T ss_pred             ----HHHHHH
Confidence                888875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=339.30  Aligned_cols=260  Identities=20%  Similarity=0.289  Sum_probs=200.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||.||+|.+....     ...+..||||++...   .......+.+|+.++++++|+||++++++
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  110 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQ-----DNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGV  110 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTS-----SSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHHHceeeeeeccCCCeEEEEEEecccc-----CCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            3467999999999999999999853211     112336999999754   23344667789999999999999999999


Q ss_pred             EEeCC--eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          158 FEASN--FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +...+  .+++||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       111 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Df  189 (326)
T 2w1i_A          111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF  189 (326)
T ss_dssp             ECC----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecC
Confidence            87654  7899999999999999998753 45999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.........                                                    ........|+..|+||
T Consensus       190 g~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~y~aP  217 (326)
T 2w1i_A          190 GLTKVLPQDKEY----------------------------------------------------YKVKEPGESPIFWYAP  217 (326)
T ss_dssp             TTCEECCSSCSE----------------------------------------------------EECSSCCSCCGGGCCH
T ss_pred             cchhhccccccc----------------------------------------------------cccccCCCCceeEECc
Confidence            998543211000                                                    0001122567789999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH------------H---HHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE------------T---TLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~------------~---~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      |++.+..++.++|||||||++|+|++|..||......            .   .+...+......+.   +...+.++.+
T Consensus       218 E~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~  294 (326)
T 2w1i_A          218 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR---PDGCPDEIYM  294 (326)
T ss_dssp             HHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC---CTTCCHHHHH
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCC---CCcccHHHHH
Confidence            9999888999999999999999999999998643111            0   11122222111111   1223448999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHc
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ||.+||+.||++||+    +.||++
T Consensus       295 li~~cl~~dP~~Rps----~~el~~  315 (326)
T 2w1i_A          295 IMTECWNNNVNQRPS----FRDLAL  315 (326)
T ss_dssp             HHHHHSCSSGGGSCC----HHHHHH
T ss_pred             HHHHHcCCChhhCcC----HHHHHH
Confidence            999999999999999    988875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=4.3e-42  Score=336.80  Aligned_cols=252  Identities=21%  Similarity=0.293  Sum_probs=196.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH--CCCCCccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM--LDHPFLPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~nIv~l~~~  157 (451)
                      ++|.+.+.||+|+||.||+|.+.+.           .||||++....      ...+..|.+++..  ++||||++++++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----------~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~  104 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGE-----------EVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAA  104 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTE-----------EEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCc-----------cEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEee
Confidence            6799999999999999999987532           39999997542      2345568888887  789999999999


Q ss_pred             EEeCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeccCCCCcEEEc
Q 013016          158 FEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH--------MLGIIYRDLKPENVLVR  225 (451)
Q Consensus       158 ~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~givH~Dlkp~NIll~  225 (451)
                      +...+    ..|+||||+++|+|.+++...   .+++..++.++.||+.||.|||        ++||+||||||+|||++
T Consensus       105 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~  181 (342)
T 1b6c_B          105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK  181 (342)
T ss_dssp             EECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred             ecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence            98876    899999999999999999763   5899999999999999999999        89999999999999999


Q ss_pred             cCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccc
Q 013016          226 SDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS  305 (451)
Q Consensus       226 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (451)
                      .++.+||+|||++.........                                                   .......
T Consensus       182 ~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------------~~~~~~~  210 (342)
T 1b6c_B          182 KNGTCCIADLGLAVRHDSATDT---------------------------------------------------IDIAPNH  210 (342)
T ss_dssp             TTSCEEECCCTTCEEEETTTTE---------------------------------------------------EEECCCS
T ss_pred             CCCCEEEEECCCceeccccccc---------------------------------------------------ccccccc
Confidence            9999999999998432211000                                                   0001123


Q ss_pred             cccCCCccCcccccCCC------CCcchhHHHHHHHHHHHHhC----------CCCCCCCC-----hHHHHHHHhcCCCC
Q 013016          306 FVGTHEYVSPEVASGGS------HGNAVDWWAFGIFIYEMIYG----------RTPFAAPS-----NETTLRNIVKKPLT  364 (451)
Q Consensus       306 ~~gt~~y~aPE~~~~~~------~~~~~DIwSlG~il~elltg----------~~pf~~~~-----~~~~~~~i~~~~~~  364 (451)
                      ..||+.|+|||++.+..      ++.++|||||||++|+|++|          ..||....     .......+......
T Consensus       211 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  290 (342)
T 1b6c_B          211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  290 (342)
T ss_dssp             CCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             CCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhC
Confidence            47999999999998753      23689999999999999999          78887642     23333333333222


Q ss_pred             --CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          365 --FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       365 --~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                        ++...........+.+|+.+||+.||++|||    +.+|++|
T Consensus       291 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i~~~  330 (342)
T 1b6c_B          291 PNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKKT  330 (342)
T ss_dssp             CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC----HHHHHHH
T ss_pred             CCCcccccchhHHHHHHHHHHHHhccChhhCCC----HHHHHHH
Confidence              1111111223347899999999999999999    9999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.4e-44  Score=350.71  Aligned_cols=246  Identities=20%  Similarity=0.203  Sum_probs=186.8

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----HHHHHHHHHHHHHHHHHCC-------
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----KKKKVHRAEMEKKILKMLD-------  147 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~-------  147 (451)
                      ++|++.++||+|+||+||+|++.+  +         .||||++......     .......+.+|+.+++.++       
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~~--~---------~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~   88 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIADH--T---------PVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVC   88 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEETT--E---------EEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSS
T ss_pred             ccchheeeecccCceEEEEEEeCC--c---------eEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhcccc
Confidence            679999999999999999999833  2         4999999865321     1122355677888888875       


Q ss_pred             --CCCccceeEEE-----------------Ee-------------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHH
Q 013016          148 --HPFLPTLYAEF-----------------EA-------------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF  195 (451)
Q Consensus       148 --h~nIv~l~~~~-----------------~~-------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~  195 (451)
                        |+||+++.+++                 .+             .+++|||||||++|++.+.+..   ..+++..++.
T Consensus        89 ~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~  165 (336)
T 2vuw_A           89 NRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKS  165 (336)
T ss_dssp             SBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHH
T ss_pred             ccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHH
Confidence              77777766654                 22             6799999999999977666543   4589999999


Q ss_pred             HHHHHHHHHHHHH-HCCCeeccCCCCcEEEccCC--------------------CEEEeccCcccccCCCCCCCCCCCCC
Q 013016          196 YAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDG--------------------HIMLSDFDLSLCSNAIPAVESPASSP  254 (451)
Q Consensus       196 i~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~  254 (451)
                      ++.||+.||+||| ++||+||||||+|||++.++                    .+||+|||+|....            
T Consensus       166 i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~------------  233 (336)
T 2vuw_A          166 ILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER------------  233 (336)
T ss_dssp             HHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE------------
T ss_pred             HHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC------------
Confidence            9999999999999 99999999999999999987                    89999999984221            


Q ss_pred             CCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHH
Q 013016          255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI  334 (451)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~  334 (451)
                                                                      ....+||+.|||||++.+.. +.++||||||+
T Consensus       234 ------------------------------------------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~  264 (336)
T 2vuw_A          234 ------------------------------------------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMK  264 (336)
T ss_dssp             ------------------------------------------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHH
T ss_pred             ------------------------------------------------CCcEEEeecccChhhhcCCC-ccceehhhhhC
Confidence                                                            01237999999999998866 89999999877


Q ss_pred             H-HHHHHhCCCCCCCCCh-HHHHHHHhcCCCCCCCCCCC---CcChHHHHHHHHHhcccCcCCcCCCCCChHHHH-cCCC
Q 013016          335 F-IYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQSPS---SMSEYHARDLISGLLNKDPCNRLGSKRGAADVK-THPF  408 (451)
Q Consensus       335 i-l~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell-~hp~  408 (451)
                      + .+++++|..||..... ......+..... .......   ...+.++++||.+||++|     |    +.|+| +|||
T Consensus       265 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s----a~e~l~~Hp~  334 (336)
T 2vuw_A          265 KENNNRWGEYHPYSNVLWLHYLTDKMLKQMT-FKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S----ATDLLCQHSL  334 (336)
T ss_dssp             HHHTTCTTSCCTHHHHHHHHHHHHHHHHTCC-CSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S----HHHHHHHCGG
T ss_pred             CCCcccccccCCCcchhhhhHHHHhhhhhhc-cCcccchhhhhhcCHHHHHHHHHHhccC-----C----HHHHHhcCCC
Confidence            7 7788899999954211 112233332211 1111111   123448999999999987     8    99999 9999


Q ss_pred             cC
Q 013016          409 FK  410 (451)
Q Consensus       409 ~~  410 (451)
                      |+
T Consensus       335 f~  336 (336)
T 2vuw_A          335 FK  336 (336)
T ss_dssp             GC
T ss_pred             cC
Confidence            96

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.8e-42  Score=330.46  Aligned_cols=225  Identities=15%  Similarity=0.135  Sum_probs=184.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||.||+|.+..+++         .||||++.............+.+|+.++.+++||||+++++++.
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~---------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~  101 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDR---------QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH  101 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTE---------EEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCc---------eEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE
Confidence            679999999999999999999987655         49999998764444455677888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+..|+||||++|++|.+++...    .....+..++.||+.||+|||++||+||||||+|||++.+|.+||+++|   
T Consensus       102 ~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~---  174 (286)
T 3uqc_A          102 TRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA---  174 (286)
T ss_dssp             ETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC---
T ss_pred             ECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc---
Confidence            999999999999999999998542    4566788999999999999999999999999999999999999998654   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                                                                                              |++     
T Consensus       175 ------------------------------------------------------------------------~~~-----  177 (286)
T 3uqc_A          175 ------------------------------------------------------------------------TMP-----  177 (286)
T ss_dssp             ------------------------------------------------------------------------CCT-----
T ss_pred             ------------------------------------------------------------------------ccC-----
Confidence                                                                                    333     


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                        .++.++|||||||++|+|++|+.||.+......+.   ....+....+...... .+.++.+||.+||+.||.+| | 
T Consensus       178 --~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dP~~R-s-  252 (286)
T 3uqc_A          178 --DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRD-IPFQISAVAARSVQGDGGIR-S-  252 (286)
T ss_dssp             --TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTT-SCHHHHHHHHHHHCTTSSCC-C-
T ss_pred             --CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccC-CCHHHHHHHHHHcccCCccC-C-
Confidence              36889999999999999999999998765533221   1111211111111122 33489999999999999999 9 


Q ss_pred             CCChHHHHc
Q 013016          397 KRGAADVKT  405 (451)
Q Consensus       397 ~~~~~ell~  405 (451)
                         +.|+++
T Consensus       253 ---~~el~~  258 (286)
T 3uqc_A          253 ---ASTLLN  258 (286)
T ss_dssp             ---HHHHHH
T ss_pred             ---HHHHHH
Confidence               888886

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.4e-41  Score=361.52  Aligned_cols=241  Identities=23%  Similarity=0.362  Sum_probs=193.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEecc-ccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNN-KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||+||+|.+.. +++         .||||++....  .......+..|+.++++++||||+++++++
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~---------~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  148 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGR---------PVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFV  148 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTE---------EEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCc---------EEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeE
Confidence            789999999999999999999875 333         49999986432  233445677899999999999999999999


Q ss_pred             EeCCe-----EEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          159 EASNF-----SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       159 ~~~~~-----~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ...+.     .||||||++|++|.+++..    .+++..++.|+.||+.||.|||++||+||||||+|||++.+ .+||+
T Consensus       149 ~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~  223 (681)
T 2pzi_A          149 EHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLI  223 (681)
T ss_dssp             EEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEEC
T ss_pred             eecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEE
Confidence            87765     7999999999999987654    59999999999999999999999999999999999999975 99999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                           ....+||+.|+
T Consensus       224 DFG~a~~~~~-----------------------------------------------------------~~~~~gt~~y~  244 (681)
T 2pzi_A          224 DLGAVSRINS-----------------------------------------------------------FGYLYGTPGFQ  244 (681)
T ss_dssp             CCTTCEETTC-----------------------------------------------------------CSCCCCCTTTS
T ss_pred             ecccchhccc-----------------------------------------------------------CCccCCCcccc
Confidence            9999843210                                                           01347999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |||++.+. ++.++|||||||++|+|++|..||......           ..+........+..+.+||.+||+.||.+|
T Consensus       245 aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  312 (681)
T 2pzi_A          245 APEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQR  312 (681)
T ss_dssp             CTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred             CHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-----------cccccccccccCHHHHHHHhhhccCChhhC
Confidence            99998775 489999999999999999999998752110           011110000112378999999999999999


Q ss_pred             CCCCCChHHHHcCCCcCC
Q 013016          394 LGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~~  411 (451)
                      |+    ..+.+.|+|+.-
T Consensus       313 ~~----~~~~l~~~l~~~  326 (681)
T 2pzi_A          313 FT----TAEEMSAQLTGV  326 (681)
T ss_dssp             CS----SHHHHHHHHHHH
T ss_pred             CC----HHHHHHHHHHHH
Confidence            99    888899988865

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=1.1e-34  Score=302.63  Aligned_cols=189  Identities=17%  Similarity=0.093  Sum_probs=129.7

Q ss_pred             eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH-------HHHHHHHHHHHHHHHHHHHC-CCCCccceeEEE
Q 013016           87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-------LEKKKKVHRAEMEKKILKML-DHPFLPTLYAEF  158 (451)
Q Consensus        87 ~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~~  158 (451)
                      .++.|+.|.+..++....++         .||+|++.+..       .......+.+.+|+++|+++ .|+||+++++++
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~---------~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~  311 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGE---------DYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG  311 (569)
T ss_dssp             C-C--------CCEEEEECS---------SEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE
T ss_pred             ccccCCcccccccccccccc---------eeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE
Confidence            45566666655554443333         49999997542       12334556788899999999 699999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ++++.+|||||||+|++|.+++...  +++++.   +|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|
T Consensus       312 ed~~~~yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlA  386 (569)
T 4azs_A          312 ENAQSGWLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSI  386 (569)
T ss_dssp             ECSSEEEEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred             EECCEEEEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccC
Confidence            9999999999999999999999875  557654   58999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +....                                                       ......+.+||+.|||||++
T Consensus       387 r~~~~-------------------------------------------------------~~~~~~t~vGTp~YmAPE~l  411 (569)
T 4azs_A          387 VTTPQ-------------------------------------------------------DCSWPTNLVQSFFVFVNELF  411 (569)
T ss_dssp             ESCC----------------------------------------------------------CCSHHHHHHHHHHHHHHC
T ss_pred             eeCCC-------------------------------------------------------CCccccCceechhhccHHHh
Confidence            53221                                                       01122346899999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTP  345 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~p  345 (451)
                      .+ .+..++|+||+|+++++|+++..+
T Consensus       412 ~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          412 AE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ------------------CCCCTTHHH
T ss_pred             CC-CCCCcccccccccchhhhccccch
Confidence            87 457789999999998887665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=4.1e-29  Score=259.11  Aligned_cols=194  Identities=17%  Similarity=0.139  Sum_probs=143.6

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHH-----HHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEV-----LEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ...++||+|+||+||+|.....           .+++|......     .......+.+.+|+.++++++||||+++..+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~-----------~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~  407 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDF-----------DVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIF  407 (540)
T ss_dssp             ---------CCEEEEEEECSSC-----------EEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCC-----------eEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEE
Confidence            4567899999999999955433           28888764322     1223335667889999999999999966666


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +...+..||||||++|++|.+++..          +..++.||+.||+|||++||+||||||+|||++.  .+||+|||+
T Consensus       408 ~~~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGl  475 (540)
T 3en9_A          408 DVDLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGL  475 (540)
T ss_dssp             EEETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTT
T ss_pred             EEeCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECcc
Confidence            6677788999999999999998865          5689999999999999999999999999999998  999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      ++.......                     ...                           +......+++||+.|||||+
T Consensus       476 a~~~~~~~~---------------------~~~---------------------------~~~~~~~~~~GT~~y~APEv  507 (540)
T 3en9_A          476 GKISNLDED---------------------KAV---------------------------DLIVFKKAVLSTHHEKFDEI  507 (540)
T ss_dssp             CEECCCHHH---------------------HHH---------------------------HHHHHHHHHHHHCGGGHHHH
T ss_pred             CEECCCccc---------------------ccc---------------------------chhhhhhhhcCCCCcCCHHH
Confidence            853321000                     000                           00001124689999999999


Q ss_pred             ccC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013016          318 ASG--GSHGNAVDWWAFGIFIYEMIYGRTPFA  347 (451)
Q Consensus       318 ~~~--~~~~~~~DIwSlG~il~elltg~~pf~  347 (451)
                      +.+  ..|+...|+|+..+-..+.+.++.+|.
T Consensus       508 ~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          508 WERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            987  557888999999999888888877764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.93  E-value=1.4e-26  Score=220.68  Aligned_cols=133  Identities=20%  Similarity=0.212  Sum_probs=106.1

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---------------HHHHHHHHHHHHHHHC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---------------KKVHRAEMEKKILKML  146 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l  146 (451)
                      |.+.+.||+|+||.||+|.+ .+++         .||||+++.......               .....+.+|+.+++++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~---------~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFG---------ECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTE---------EEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCEeccCCCceEEEEEe-CCCC---------EEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            55559999999999999998 4443         499999975432111               2345677899999999


Q ss_pred             CCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       147 ~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      +  | +++.+++.. +..|+||||++|++|.+ +..        .....++.||+.||.|||++||+||||||+|||++ 
T Consensus       162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-  227 (282)
T 1zar_A          162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-  227 (282)
T ss_dssp             T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-
T ss_pred             c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-
Confidence            9  5 666665544 56799999999999988 321        23457999999999999999999999999999999 


Q ss_pred             CCCEEEeccCcc
Q 013016          227 DGHIMLSDFDLS  238 (451)
Q Consensus       227 ~~~~kl~Dfg~a  238 (451)
                      +|.+||+|||+|
T Consensus       228 ~~~vkl~DFG~a  239 (282)
T 1zar_A          228 EEGIWIIDFPQS  239 (282)
T ss_dssp             TTEEEECCCTTC
T ss_pred             CCcEEEEECCCC
Confidence            999999999998

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.85  E-value=1.6e-21  Score=183.34  Aligned_cols=139  Identities=18%  Similarity=0.176  Sum_probs=106.0

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcce--EEEEEcchHHHH---------------------HHHHHHHHHH
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCL--YAMKVVNKEVLE---------------------KKKKVHRAEM  138 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~  138 (451)
                      |.+.+.||.|+||.||+|.+..+++         .  ||||+++.....                     .......+.+
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~---------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGK---------PVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK  119 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTE---------EEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCc---------EeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence            7899999999999999999844332         5  999997543211                     0112235778


Q ss_pred             HHHHHHHCCCCCc--cceeEEEEeCCeEEEEEeeccC-C----chhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HC
Q 013016          139 EKKILKMLDHPFL--PTLYAEFEASNFSCIVMEFCSG-G----DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-ML  210 (451)
Q Consensus       139 e~~~l~~l~h~nI--v~l~~~~~~~~~~~lV~E~~~g-g----sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~  210 (451)
                      |+.++.++.|++|  +.+++.    +..+|||||+.+ |    +|.++...     .++..+..++.||+.||.||| ++
T Consensus       120 E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~  190 (258)
T 1zth_A          120 EFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA  190 (258)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999988764  444442    357899999932 3    66665432     235577899999999999999 99


Q ss_pred             CCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          211 GIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       211 givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ||+||||||+|||++.  .++|+|||+|..
T Consensus       191 givHrDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          191 ELVHADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             CEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             CEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence            9999999999999998  999999999853

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.78  E-value=8.6e-19  Score=171.90  Aligned_cols=138  Identities=16%  Similarity=0.191  Sum_probs=99.4

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-----------------H--HHHHHHHHHHHHH
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-----------------K--KKKVHRAEMEKKI  142 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------~--~~~~~~~~~e~~~  142 (451)
                      |.+.+.||.|++|.||+|.+..+.          .||||+++.....                 .  ........+|...
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~----------~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n  166 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGK----------QKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF  166 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCC----------EEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECCCCC----------EEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            999999999999999999876433          3999997532110                 0  0011122456777


Q ss_pred             HHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 013016          143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV  222 (451)
Q Consensus       143 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NI  222 (451)
                      |.++.+.++....-+...  ..+|||||+.|++|.++..        ......++.||+.+|.+||++|||||||||.||
T Consensus       167 L~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NI  236 (397)
T 4gyi_A          167 MKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHGLIHGDFNEFNI  236 (397)
T ss_dssp             HHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSE
T ss_pred             HHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHE
Confidence            777755554322211122  2379999999998876532        123567889999999999999999999999999


Q ss_pred             EEccCC----------CEEEeccCccc
Q 013016          223 LVRSDG----------HIMLSDFDLSL  239 (451)
Q Consensus       223 ll~~~~----------~~kl~Dfg~a~  239 (451)
                      |++.+|          .+.|+||+.+.
T Consensus       237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          237 LIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             EEeCCCCcccccccccceEEEEeCCcc
Confidence            999877          38999999874

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.46  E-value=2.9e-13  Score=126.78  Aligned_cols=139  Identities=15%  Similarity=0.090  Sum_probs=110.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ..|.+...+|.|+.+.||++...+  +         .+++|+......   .....+..|+.+++.+. +..++++++++
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~--~---------~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~   79 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGEN--E---------NLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFE   79 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSS--C---------EEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECCC--C---------cEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            679999999999999999987542  2         299999875321   11234667999999884 67788999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-----------------------------  209 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-----------------------------  209 (451)
                      ...+..|+|||+++|.+|.+...       +......++.++..+|..||+                             
T Consensus        80 ~~~~~~~lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (263)
T 3tm0_A           80 RHDGWSNLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD  152 (263)
T ss_dssp             EETTEEEEEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred             ecCCceEEEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence            99999999999999999977521       122345788999999999998                             


Q ss_pred             ------------------------------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 ------------------------------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ------------------------------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                                    ..++|+|++|.|||++.++.+.|+||+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                          458999999999999865556799999874

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.34  E-value=2.7e-12  Score=119.64  Aligned_cols=134  Identities=13%  Similarity=0.075  Sum_probs=99.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC--ccceeEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF--LPTLYAE  157 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~  157 (451)
                      .+|.+....+.|..+.||++....+.          .+++|+....      ....+..|+.+++.+.+.+  +++++++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~----------~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~   83 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRP----------VLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDV   83 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSC----------CEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEE
T ss_pred             CCCceEecccCCCCceEEEEecCCCC----------eEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEe
Confidence            56777655556777999999754322          2999997643      1234566888888885444  5679999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------------
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--------------------------  211 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--------------------------  211 (451)
                      +...+..++||||++|.+|.  ...     ..   ...++.+++..|..||+..                          
T Consensus        84 ~~~~~~~~~v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (264)
T 1nd4_A           84 VTEAGRDWLLLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLV  153 (264)
T ss_dssp             EECSSCEEEEEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCC
T ss_pred             ccCCCCCEEEEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCc
Confidence            88888899999999998884  111     12   2356777888888888643                          


Q ss_pred             --------------------------------CeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          212 --------------------------------IIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       212 --------------------------------ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                                      ++|+|++|.|||++.++.+.|+|||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          154 DQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                            9999999999999876666799999974

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.27  E-value=1.4e-11  Score=120.88  Aligned_cols=140  Identities=19%  Similarity=0.248  Sum_probs=105.4

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcc--hHHHHHHHHHHHHHHHHHHHHHCC--CCCccceeEEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVN--KEVLEKKKKVHRAEMEKKILKMLD--HPFLPTLYAEF  158 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~nIv~l~~~~  158 (451)
                      .-.+.|+.|.++.||++...+.           .+++|+..  .....  .....+.+|..+++.+.  +..+++++.++
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~~-----------~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~  107 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPGQ-----------TYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALC  107 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSSC-----------EEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEE
T ss_pred             ceEEEcCCcccceEEEEEECCc-----------eEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEEC
Confidence            3467799999999999876542           28999886  43211  12345667999999886  45588999988


Q ss_pred             EeC---CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------
Q 013016          159 EAS---NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM--------------------------  209 (451)
Q Consensus       159 ~~~---~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~--------------------------  209 (451)
                      .+.   +..|+||||++|..+.+..    ...++......++.+++..|..||+                          
T Consensus       108 ~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (359)
T 3dxp_A          108 EDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWT  183 (359)
T ss_dssp             CCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHH
T ss_pred             CCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHH
Confidence            776   4689999999998885421    1237888899999999999999997                          


Q ss_pred             --------------------------------CCCeeccCCCCcEEEccCCC--EEEeccCccc
Q 013016          210 --------------------------------LGIIYRDLKPENVLVRSDGH--IMLSDFDLSL  239 (451)
Q Consensus       210 --------------------------------~givH~Dlkp~NIll~~~~~--~kl~Dfg~a~  239 (451)
                                                      .+++|+|+++.|||++.++.  +.|+||+.+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          184 KQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             HHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             HHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                            35899999999999997763  6899999874

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.15  E-value=5.6e-11  Score=113.79  Aligned_cols=131  Identities=18%  Similarity=0.160  Sum_probs=97.4

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCC--ccceeEEEEeCC
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPF--LPTLYAEFEASN  162 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--Iv~l~~~~~~~~  162 (451)
                      +.++.|....||++.    . +         +++|+....     .....+..|..+++.+. +..  +++++......+
T Consensus        26 ~~~~~G~~n~v~~v~----~-~---------~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~   86 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----R-D---------FIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE   86 (304)
T ss_dssp             CEEEECSSEEEEEST----T-S---------EEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS
T ss_pred             EecCCCCcceEEEEC----C-E---------EEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC
Confidence            458999999999863    1 1         899997643     23356677999998873 333  455655544333


Q ss_pred             ---eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------
Q 013016          163 ---FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM------------------------------  209 (451)
Q Consensus       163 ---~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~------------------------------  209 (451)
                         ..|+|||+++|.+|.+....    .++..+...++.+++..|..||+                              
T Consensus        87 ~~~~~~~vm~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (304)
T 3sg8_A           87 TYQMSFAGFTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLS  162 (304)
T ss_dssp             SCSCSCEEEECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCcceEEEcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhc
Confidence               45899999999998754332    26788888889999999988886                              


Q ss_pred             ----------------------------CCCeeccCCCCcEEEcc--CCCEEEeccCccc
Q 013016          210 ----------------------------LGIIYRDLKPENVLVRS--DGHIMLSDFDLSL  239 (451)
Q Consensus       210 ----------------------------~givH~Dlkp~NIll~~--~~~~kl~Dfg~a~  239 (451)
                                                  ..++|+|++|.||+++.  .+.+.|+||+.+.
T Consensus       163 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~  222 (304)
T 3sg8_A          163 RELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA  222 (304)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred             ccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence                                        13799999999999998  4567899999874

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.75  E-value=1.8e-07  Score=89.45  Aligned_cols=132  Identities=14%  Similarity=0.115  Sum_probs=93.8

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC---CccceeEEEE-e
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP---FLPTLYAEFE-A  160 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---nIv~l~~~~~-~  160 (451)
                      ...++.|....||+.    +.+          +++|+....     .....+..|..+|+.+.+.   .+++++.++. .
T Consensus        24 v~~l~~G~~n~v~~v----g~~----------~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~   84 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGD----------WVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS   84 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTT----------EEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT
T ss_pred             eeecCCCcceeEEEE----CCE----------EEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC
Confidence            445789999999987    221          899996432     2345677799999998653   3677777774 4


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC------------------------------
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML------------------------------  210 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~------------------------------  210 (451)
                      .+..|+|||+++|.+|.+..-.    .++......++.++...|..||+.                              
T Consensus        85 ~g~~~~v~e~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~  160 (306)
T 3tdw_A           85 DGNPFVGYRKVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV  160 (306)
T ss_dssp             TSCEEEEEECCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEeccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence            5678899999999988763211    145555555666666666666642                              


Q ss_pred             ------------------------------CCeeccCCCCcEEEcc---CCCE-EEeccCccc
Q 013016          211 ------------------------------GIIYRDLKPENVLVRS---DGHI-MLSDFDLSL  239 (451)
Q Consensus       211 ------------------------------givH~Dlkp~NIll~~---~~~~-kl~Dfg~a~  239 (451)
                                                    .++|+|+++.|||++.   ++.+ .|+||+.+.
T Consensus       161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence                                          3599999999999997   4554 899999874

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.71  E-value=2.5e-07  Score=86.50  Aligned_cols=136  Identities=16%  Similarity=0.100  Sum_probs=97.3

Q ss_pred             ceEEeeeccCCee-EEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEE
Q 013016           82 FDLHRRIGAGDIG-TVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFE  159 (451)
Q Consensus        82 y~~~~~LG~G~~g-~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~  159 (451)
                      |... .+..|..+ .||+.........         ++||+-...      ....+..|...|+.+. +--+.++++++.
T Consensus        27 ~~~~-~~~~G~S~~~v~rl~~~~~~~~---------~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~   90 (272)
T 4gkh_A           27 YRWA-RDNVGQSGATIYRLYGKPNAPE---------LFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIR   90 (272)
T ss_dssp             CEEE-EEECSSSSCEEEEEECCTTCCC---------EEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEE
T ss_pred             CeEE-EccCCCcCCeEEEEEecCCCeE---------EEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEE
Confidence            4433 34445554 7998776554433         899987644      2345667888888874 334788999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM------------------------------  209 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~------------------------------  209 (451)
                      +.+..|+|||+++|.++.+.....      ......+..++...|.-||.                              
T Consensus        91 ~~~~~~lvme~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (272)
T 4gkh_A           91 TPDDAWLLTTAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA  164 (272)
T ss_dssp             ETTEEEEEEECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCG
T ss_pred             ECCeEEEEEEeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhh
Confidence            999999999999998887765432      12234566667777777774                              


Q ss_pred             ----------------------------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 ----------------------------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ----------------------------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                                  ..++|+|+.+.|||++.++.+-|+||+.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          165 SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             GGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             hhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                                        027999999999999977667799999874

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.39  E-value=4.1e-07  Score=88.66  Aligned_cols=87  Identities=7%  Similarity=0.037  Sum_probs=56.3

Q ss_pred             eEEeee-ccCCeeEEEEEEecc------ccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-C--CCcc
Q 013016           83 DLHRRI-GAGDIGTVYLCSLNN------KYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-H--PFLP  152 (451)
Q Consensus        83 ~~~~~L-G~G~~g~Vy~~~~~~------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~nIv  152 (451)
                      ...+.| +.|....+|++....      .++         .+++|+..............+..|..+++.+. +  ..++
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~---------~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP   93 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQ---------KLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVP   93 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEE---------EEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCC
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCc---------eEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCC
Confidence            345678 899999999987540      011         28899876432000000134556888888774 2  3578


Q ss_pred             ceeEEEEeC---CeEEEEEeeccCCchhh
Q 013016          153 TLYAEFEAS---NFSCIVMEFCSGGDLHS  178 (451)
Q Consensus       153 ~l~~~~~~~---~~~~lV~E~~~ggsL~~  178 (451)
                      +++.++.+.   +..|+|||+++|..+.+
T Consensus        94 ~v~~~~~~~~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A           94 RVRWIETTGDVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             CEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred             cEEEEccCCCccCCceEEEEecCCCChhh
Confidence            888887665   46789999998877653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.33  E-value=1.4e-06  Score=86.30  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=48.8

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHH-HHH---HHHHHHHHHHHHHHHCCC--C-CccceeE
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL-EKK---KKVHRAEMEKKILKMLDH--P-FLPTLYA  156 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~---~~~~~~~~e~~~l~~l~h--~-nIv~l~~  156 (451)
                      -.+.||.|..+.||++.....++.         ++||....... ...   ....+...|.++++.+..  + .+++++.
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~---------~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~  104 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRA---------LIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY  104 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CE---------EEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE
T ss_pred             EEEECCCCceEEEEEEEECCCCcE---------EEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE
Confidence            356799999999999976543332         99998653211 011   122345668888887632  3 3556665


Q ss_pred             EEEeCCeEEEEEeeccCC
Q 013016          157 EFEASNFSCIVMEFCSGG  174 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~gg  174 (451)
                      +  +.+..++|||+++|.
T Consensus       105 ~--d~~~~~lvmE~l~g~  120 (397)
T 2olc_A          105 S--DTEMAVTVMEDLSHL  120 (397)
T ss_dssp             E--ETTTTEEEECCCTTS
T ss_pred             E--cCCccEEEEEeCCCc
Confidence            4  345568999999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.32  E-value=5.6e-06  Score=79.78  Aligned_cols=30  Identities=20%  Similarity=0.262  Sum_probs=27.4

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++||+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999888899999999874

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.00  E-value=6.7e-05  Score=71.54  Aligned_cols=77  Identities=13%  Similarity=0.187  Sum_probs=58.7

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC---CCCccceeEEEE
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD---HPFLPTLYAEFE  159 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~nIv~l~~~~~  159 (451)
                      .-.+.|+.|....+|+....+  +         .++||+....      ....+..|...|+.+.   ...+++++.++.
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~~--~---------~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~  101 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDEV--Q---------TVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGN  101 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESSS--C---------EEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE
T ss_pred             eeeEEeCCccceeeeEEEECC--C---------eEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEee
Confidence            345678999999999987532  2         2889998643      1345566888887773   366889999998


Q ss_pred             eCCeEEEEEeeccCCch
Q 013016          160 ASNFSCIVMEFCSGGDL  176 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL  176 (451)
                      ..+..++|||+++|..+
T Consensus       102 ~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A          102 SQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             CSSEEEEEEECCCCCCC
T ss_pred             cCCceEEEEEeccCCCC
Confidence            88899999999998765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.83  E-value=4.3e-05  Score=76.15  Aligned_cols=31  Identities=26%  Similarity=0.375  Sum_probs=27.2

Q ss_pred             HHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       208 H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +...++|+|+++.|||++.++ +.|+||+.+.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~  260 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSF  260 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence            356799999999999999776 9999999874

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.79  E-value=5.9e-05  Score=71.47  Aligned_cols=133  Identities=14%  Similarity=0.103  Sum_probs=75.0

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEeCCe
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEASNF  163 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~~~~  163 (451)
                      .+.|+.|....+|++     .+          +++|+.....    ........|..+++.+...++ +++++.+  .+.
T Consensus        23 i~~l~gG~tN~~~~~-----~~----------~vlR~~~~~~----~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~   81 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GD----------LCLRIPGKGT----EEYINRANEAVAAREAAKAGVSPEVLHVD--PAT   81 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TT----------EEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTT
T ss_pred             eeEcCCcccccccee-----ee----------EEEECCCCCc----cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCC
Confidence            667899999999998     11          8999987531    111223447777776643233 5666544  333


Q ss_pred             EEEEEeec-cCCchhhh------------------hhhCCC---CCCC-HHHHHHHHH--------------HHHHHHHH
Q 013016          164 SCIVMEFC-SGGDLHSL------------------RHKQPH---KRFS-LTSARFYAA--------------EVLVALEY  206 (451)
Q Consensus       164 ~~lV~E~~-~ggsL~~~------------------l~~~~~---~~l~-~~~~~~i~~--------------qil~aL~~  206 (451)
                      -++|+||+ +|.+|...                  ++....   ..+. ...+..+..              .+...+..
T Consensus        82 ~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  161 (301)
T 3dxq_A           82 GVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGG  161 (301)
T ss_dssp             CCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHH
T ss_pred             CEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHH
Confidence            47899999 77665320                  111110   0011 111111111              11111222


Q ss_pred             HH----H----CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          207 LH----M----LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       207 LH----~----~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      |.    .    ..++|+|+.+.||+ ..++.+.|+||+.+.
T Consensus       162 l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          162 VRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             HHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             HHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            21    1    24899999999999 667789999998874

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.72  E-value=0.00015  Score=69.24  Aligned_cols=142  Identities=20%  Similarity=0.201  Sum_probs=79.5

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC--ccceeEE--
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF--LPTLYAE--  157 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--Iv~l~~~--  157 (451)
                      ..-.+.|+.|....+|++...++ +          +++|+.....     ....+..|..+++.+...+  +++++..  
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~~~g-~----------~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~   87 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHTTKD-P----------LILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKD   87 (322)
T ss_dssp             EEEEEEECC---EEEEEEEESSC-C----------EEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTT
T ss_pred             ceEeeccCCCcccceEEEEeCCc-c----------EEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCC
Confidence            33456788898899999876433 2          8999987531     1233445666666653212  3333321  


Q ss_pred             ----EEeCCeEEEEEeeccCCchhh-----------h---hhhC----CCCC---CC---HHHHHH------------HH
Q 013016          158 ----FEASNFSCIVMEFCSGGDLHS-----------L---RHKQ----PHKR---FS---LTSARF------------YA  197 (451)
Q Consensus       158 ----~~~~~~~~lV~E~~~ggsL~~-----------~---l~~~----~~~~---l~---~~~~~~------------i~  197 (451)
                          ....+..++||++++|..+..           .   ++..    ....   ..   |.....            +.
T Consensus        88 g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~  167 (322)
T 2ppq_A           88 GELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLR  167 (322)
T ss_dssp             CCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHH
T ss_pred             CCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhH
Confidence                233467899999998865421           0   1111    0000   11   111000            01


Q ss_pred             HHHHHHHHHHHH-------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          198 AEVLVALEYLHM-------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       198 ~qil~aL~~LH~-------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..+...++.|..       .++||+|+++.|||++.++.+.|+||+.+.
T Consensus       168 ~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          168 EEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            124445566653       469999999999999977656899999874

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.68  E-value=0.00046  Score=61.34  Aligned_cols=60  Identities=13%  Similarity=0.011  Sum_probs=45.4

Q ss_pred             CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEccCCCEEEec
Q 013016          174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       174 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      -||.++|... +.+++++++|.++.|.+.+|.-+- .+.-..+=+.|..|+|..+|.|-+.+
T Consensus        33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            4788888766 467999999999999999988762 22222344457899999999988764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.52  E-value=0.00022  Score=68.45  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=26.5

Q ss_pred             CCCeeccCCCCcEEEccC----CCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSD----GHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~----~~~kl~Dfg~a~  239 (451)
                      ..++|||+.+.|||++.+    +.+.|+||+.+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            469999999999999874    689999999874

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.48  E-value=0.00017  Score=72.09  Aligned_cols=82  Identities=21%  Similarity=0.267  Sum_probs=48.7

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEEEeCC
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEFEASN  162 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~~~~~  162 (451)
                      -.+.|+.|....||++.........  ...+..+++|+.....  .   ...+..|..+++.+...+ .+++++.+.+  
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~--~~~~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~--  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPI--RNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFSG--  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCS--SSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT--
T ss_pred             EEEEeCCCcccceEEEEeCCCcccc--CCCCceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC--
Confidence            3567888999999999865321000  0001138899884310  0   022335788887775333 3677776542  


Q ss_pred             eEEEEEeeccCCch
Q 013016          163 FSCIVMEFCSGGDL  176 (451)
Q Consensus       163 ~~~lV~E~~~ggsL  176 (451)
                        .+||||++|.+|
T Consensus       148 --g~v~e~l~G~~l  159 (429)
T 1nw1_A          148 --GRLEEYIPSRPL  159 (429)
T ss_dssp             --EEEECCCCEEEC
T ss_pred             --CEEEEEeCCccc
Confidence              289999987555

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.47  E-value=0.00026  Score=69.12  Aligned_cols=83  Identities=16%  Similarity=0.203  Sum_probs=45.0

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEEEeCCe
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEFEASNF  163 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~~~~~~  163 (451)
                      ...|+.|....+|++...+..... ....+..+++|+.....    ........|..+++.+...+ .+++++.+  .+ 
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~-~~~~~~~~vlRi~~~~~----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANN-YNSIRTRVLFRIYGKHV----DELYNTISEFEVYKTMSKYKIAPQLLNTF--NG-  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTT-CTTSCCEEEEEECCTTG----GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred             EEEeCCcccceEEEEEeCCCCccc-ccCCCceEEEEecCCCc----cceecHHHHHHHHHHHHhcCCCCceEEec--CC-
Confidence            456888888999999865421000 00000138899886431    11112345777777774333 45777654  22 


Q ss_pred             EEEEEeeccCCch
Q 013016          164 SCIVMEFCSGGDL  176 (451)
Q Consensus       164 ~~lV~E~~~ggsL  176 (451)
                       ++||||++|.++
T Consensus       110 -~~v~e~i~G~~l  121 (369)
T 3c5i_A          110 -GRIEEWLYGDPL  121 (369)
T ss_dssp             -EEEEECCCSEEC
T ss_pred             -cEEEEEecCCcC
Confidence             689999988654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.45  E-value=0.00054  Score=64.31  Aligned_cols=80  Identities=14%  Similarity=0.047  Sum_probs=55.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC---CCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH---PFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~nIv~l~~  156 (451)
                      ....-+..+|.|..+.||+.+..++..          |.+|+......   .....+..|...|+.+.-   --++++++
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~----------~~vK~~~~~~~---~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~   81 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTP----------LFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAG   81 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCE----------EEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCE----------EEEEEeCCCCc---chhhHHHHHHHHHHHHHhhCCCCcceEEe
Confidence            346678889999999999998765532          99998754321   122345678888888842   23566666


Q ss_pred             EEEeCCeEEEEEeeccCCch
Q 013016          157 EFEASNFSCIVMEFCSGGDL  176 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL  176 (451)
                      +.    ..++|||++.++..
T Consensus        82 ~~----~~~lv~e~l~~~~~   97 (288)
T 3f7w_A           82 WD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             EE----TTEEEEECCCCCCC
T ss_pred             cc----CceEEEEeecccCC
Confidence            43    24789999977653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.39  E-value=0.00044  Score=67.66  Aligned_cols=149  Identities=17%  Similarity=0.274  Sum_probs=84.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      +...+ +.|..|-...+|++........  ....+.-+++|+.....    .....+.+|..+++.+. +.-.+++++.+
T Consensus        51 ~~l~v-~~lsGG~TN~~y~v~~~~~~~~--~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~  123 (379)
T 3feg_A           51 EELRV-YPVSGGLSNLLFRCSLPDHLPS--VGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVF  123 (379)
T ss_dssp             GGCCC-EEC-----CCEEEEECCTTSCC--CSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred             CceEE-EEcCCcccccEEEEEeCCCccc--cCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEc
Confidence            44553 4677788899999986431100  00011238999874321    12344456888888774 32346777766


Q ss_pred             EeCCeEEEEEeeccCCchhhh-----------------hhhCC---CCCC--CHHHHHHHHHHHHH--------------
Q 013016          159 EASNFSCIVMEFCSGGDLHSL-----------------RHKQP---HKRF--SLTSARFYAAEVLV--------------  202 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~-----------------l~~~~---~~~l--~~~~~~~i~~qil~--------------  202 (451)
                      .++    +||||++|.+|..-                 ++...   .+..  -+.++.++..++..              
T Consensus       124 ~~g----~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~  199 (379)
T 3feg_A          124 PEG----RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEM  199 (379)
T ss_dssp             TTE----EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHH
T ss_pred             CCc----cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhh
Confidence            542    99999998766421                 11111   1112  24555656554422              


Q ss_pred             -----HHHHHHH--------CCCeeccCCCCcEEEccC----CCEEEeccCccc
Q 013016          203 -----ALEYLHM--------LGIIYRDLKPENVLVRSD----GHIMLSDFDLSL  239 (451)
Q Consensus       203 -----aL~~LH~--------~givH~Dlkp~NIll~~~----~~~kl~Dfg~a~  239 (451)
                           .+..|.+        ..++|+|+.+.|||++.+    +.+.|+||..+.
T Consensus       200 ~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          200 YSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             TTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence                 2344432        259999999999999876    789999999874

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.35  E-value=0.0013  Score=62.71  Aligned_cols=137  Identities=18%  Similarity=0.162  Sum_probs=75.6

Q ss_pred             eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCC--CccceeEE-----E
Q 013016           86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHP--FLPTLYAE-----F  158 (451)
Q Consensus        86 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--nIv~l~~~-----~  158 (451)
                      ..|+ |....||++...++.+          +++|+.+....    ....+..|..+++.+...  .+++++..     .
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~----------~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~   96 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRR----------FVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLL   96 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCC----------EEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCE
T ss_pred             Eeec-CcccceEEEEcCCCCE----------EEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEE
Confidence            3466 8888999886543322          89999863311    112344466676666321  24444442     2


Q ss_pred             EeCCeEEEEEeeccCCchhh-----------h---hhh----CCC---CCCCHHHH----------------------HH
Q 013016          159 EASNFSCIVMEFCSGGDLHS-----------L---RHK----QPH---KRFSLTSA----------------------RF  195 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~-----------~---l~~----~~~---~~l~~~~~----------------------~~  195 (451)
                      ...+..++||++++|..+..           .   ++.    ...   ..+.....                      ..
T Consensus        97 ~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  176 (328)
T 1zyl_A           97 NHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLK  176 (328)
T ss_dssp             EETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHH
T ss_pred             EECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHH
Confidence            33567789999998865421           0   111    000   11222111                      01


Q ss_pred             HHHHHHHHHHHH----HHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          196 YAAEVLVALEYL----HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       196 i~~qil~aL~~L----H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .+.+++..+.-+    ....++|+|+++.|||++ + .+.|+||+.+.
T Consensus       177 ~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          177 ATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             HHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             HHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            111222222211    124589999999999999 5 89999998874

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.02  E-value=0.0041  Score=59.82  Aligned_cols=30  Identities=27%  Similarity=0.423  Sum_probs=27.0

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            469999999999999988899999998764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.97  E-value=0.0029  Score=63.47  Aligned_cols=76  Identities=21%  Similarity=0.238  Sum_probs=48.4

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCc-cceeEEEEeCC
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFL-PTLYAEFEASN  162 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nI-v~l~~~~~~~~  162 (451)
                      -.+.|+.|-...+|++...+..+         .+++|+.....    ........|..+++.+...++ +++++.+. + 
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~---------~~vLRi~g~~~----~~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~-  176 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQA---------KYLIRLYGPKT----DEIINREREKKISCILYNKNIAKKIYVFFT-N-  176 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTE---------EEEEEEECC-C----CSCSCHHHHHHHHHHHTTSSSBCCEEEEET-T-
T ss_pred             EEEEcCCCeEeEEEEEEECCCCc---------eEEEEECCCCh----hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C-
Confidence            35678889999999998754212         28899875321    111122468888988865554 67787763 2 


Q ss_pred             eEEEEEeeccCCch
Q 013016          163 FSCIVMEFCSGGDL  176 (451)
Q Consensus       163 ~~~lV~E~~~ggsL  176 (451)
                        .+||||++|.+|
T Consensus       177 --G~v~e~I~G~~l  188 (458)
T 2qg7_A          177 --GRIEEFMDGYAL  188 (458)
T ss_dssp             --EEEEECCCSEEC
T ss_pred             --eEEEEeeCCccC
Confidence              259999988665

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.25  E-value=0.013  Score=58.02  Aligned_cols=83  Identities=19%  Similarity=0.264  Sum_probs=48.6

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEEEeCC
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEFEASN  162 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~~~~~  162 (451)
                      -++.|..|-...+|++.........  ...+.-+++|+.....    .......+|..+++.+. +.-.+++++.+.  +
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~--~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~  145 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSL--SLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADFP--E  145 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-------CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T
T ss_pred             EEEEcCCCcccceEEEEeCCCcccc--cCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C
Confidence            3556778888999999875321000  0001138999875431    12223345888887774 333466776432  2


Q ss_pred             eEEEEEeeccCCch
Q 013016          163 FSCIVMEFCSGGDL  176 (451)
Q Consensus       163 ~~~lV~E~~~ggsL  176 (451)
                        ++||||++|..|
T Consensus       146 --~~I~efI~G~~l  157 (424)
T 3mes_A          146 --GRIEEFIDGEPL  157 (424)
T ss_dssp             --EEEEECCCSEEC
T ss_pred             --CEEEEEeCCccC
Confidence              689999998765

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.94  E-value=0.029  Score=55.13  Aligned_cols=28  Identities=29%  Similarity=0.430  Sum_probs=24.2

Q ss_pred             CeeccCCCCcEEEc------cCCCEEEeccCccc
Q 013016          212 IIYRDLKPENVLVR------SDGHIMLSDFDLSL  239 (451)
Q Consensus       212 ivH~Dlkp~NIll~------~~~~~kl~Dfg~a~  239 (451)
                      ++|+|+.+.|||+.      .++.+.++||..|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            68999999999993      45679999999874

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=93.74  E-value=0.26  Score=43.58  Aligned_cols=83  Identities=14%  Similarity=0.104  Sum_probs=62.8

Q ss_pred             CCCCccceeEEEEeCCeEEEEEeecc-CCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc
Q 013016          147 DHPFLPTLYAEFEASNFSCIVMEFCS-GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR  225 (451)
Q Consensus       147 ~h~nIv~l~~~~~~~~~~~lV~E~~~-ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~  225 (451)
                      .||+++.. .+-++.+.+.+.++.-. +-++.. +     ..++....++++..|+....+++  .=+|--|+|+||+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~  113 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFT  113 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEEC
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEc
Confidence            68888876 56677777777777643 223333 2     23788999999999998875554  348888999999999


Q ss_pred             cCCCEEEeccCcc
Q 013016          226 SDGHIMLSDFDLS  238 (451)
Q Consensus       226 ~~~~~kl~Dfg~a  238 (451)
                      .++.+++.-.|+.
T Consensus       114 ~~~~p~i~~RGik  126 (215)
T 4ann_A          114 RDGLPIAKTRGLQ  126 (215)
T ss_dssp             TTSCEEESCCEET
T ss_pred             CCCCEEEEEccCc
Confidence            9999999988863

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=92.14  E-value=0.77  Score=40.66  Aligned_cols=81  Identities=11%  Similarity=0.003  Sum_probs=60.2

Q ss_pred             CCCCccceeEEEEeCCeEEEEEeeccCC-chhhhhhhCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCCeeccCCCCcEEE
Q 013016          147 DHPFLPTLYAEFEASNFSCIVMEFCSGG-DLHSLRHKQPHKRFSLTSARFYAAEVLVALE-YLHMLGIIYRDLKPENVLV  224 (451)
Q Consensus       147 ~h~nIv~l~~~~~~~~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~-~LH~~givH~Dlkp~NIll  224 (451)
                      .||++  -..+-.+++.+.+.++.-+++ ++. .+.     .++....++++..|+.... ++  ..-+|--|+|+||++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~-----~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f  117 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR-----KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMF  117 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH-----TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH-----hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEE
Confidence            68888  444557778888888765333 333 232     2788899998888887666 44  445888999999999


Q ss_pred             ccCCCEEEeccCc
Q 013016          225 RSDGHIMLSDFDL  237 (451)
Q Consensus       225 ~~~~~~kl~Dfg~  237 (451)
                      +.++.+++...|+
T Consensus       118 ~~~~~p~i~hRGi  130 (219)
T 4ano_A          118 NRALEPFFLHVGV  130 (219)
T ss_dssp             CTTCCEEESCCEE
T ss_pred             eCCCcEEEEEcCC
Confidence            9999999998886

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=87.89  E-value=3  Score=39.26  Aligned_cols=137  Identities=15%  Similarity=0.194  Sum_probs=74.1

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE---
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE---  157 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~---  157 (451)
                      ++..++.+-.|..| ||.|.-++.           .|+||-.. .     ...+.+.-++...-.+.-|+..-+.-.   
T Consensus        70 ~v~~I~~s~~Gstg-vff~~td~~-----------~~VVK~s~-~-----l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E  131 (342)
T 1cja_A           70 QFKGIERSEKGTEG-LFFVETESG-----------VFIVKRST-N-----IESETFCSLLCMRLGLHAPKVRVVSSNSEE  131 (342)
T ss_dssp             GEEEEEECCSTTSC-EEEEEESSC-----------EEEEECCT-T-----HHHHHHHHHHHHHHTCCCCCEEEEESSSHH
T ss_pred             CeeEEEeccCCCCC-eEEEEeCCC-----------EEEEeCcH-H-----HHHHHHHHHHHHHhCCCCCCeeEEeeCcHH
Confidence            47777777777655 555554322           49999552 1     122333334444444555553222110   


Q ss_pred             -----------E--------EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHCC----C
Q 013016          158 -----------F--------EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV--LVALEYLHMLG----I  212 (451)
Q Consensus       158 -----------~--------~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qi--l~aL~~LH~~g----i  212 (451)
                                 .        ...+..+++|+|.+|..|.++-...-...+...    .+.++  +-+++.+..++    +
T Consensus       132 ~~e~~~~L~~~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl  207 (342)
T 1cja_A          132 GTNMLECLAAIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPI  207 (342)
T ss_dssp             HHHHHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCS
T ss_pred             HHHHHHHHHHhhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcc
Confidence                       0        012356799999998777654221100113222    23332  34566666553    2


Q ss_pred             ee-ccCCCCcEEEccCC-CEEEeccCccc
Q 013016          213 IY-RDLKPENVLVRSDG-HIMLSDFDLSL  239 (451)
Q Consensus       213 vH-~Dlkp~NIll~~~~-~~kl~Dfg~a~  239 (451)
                      +. .--.++|||++.++ .+.++|-+.+.
T Consensus       208 ~W~n~GN~~NIL~~~~n~~~~~IDhn~af  236 (342)
T 1cja_A          208 AWTNEGNLDNIMLSERGATVVPIDSKIIP  236 (342)
T ss_dssp             SSCSCCCGGGEEEESBTTCEEECSCCCCC
T ss_pred             cccCCCChhheEEeCCCCeEEEEcCCccc
Confidence            11 23589999998755 48899999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	451
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-75
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-64
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-62
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-62
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-61
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-60
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-59
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-59
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-58
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-56
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-56
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-56
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-56
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-54
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-54
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-53
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-52
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-50
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-50
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-49
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-49
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-48
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-48
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-48
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-46
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-46
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-46
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-45
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-44
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-44
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-43
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-43
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-42
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-42
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-42
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-41
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-41
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-41
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-40
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-39
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-39
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-39
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-38
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-38
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-37
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-27
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-36
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-36
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-35
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-35
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-35
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-34
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-27
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-33
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-33
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-24
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-33
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-33
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-32
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-32
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-24
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-32
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-26
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-31
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-25
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-19

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  234 bits (597), Expect = 8e-75
 Identities = 103/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF   + +G G   TV L          R       YA+K++ K  + K+ KV     E+
Sbjct: 9   DFKFGKILGEGSFSTVVLA---------RELATSREYAIKILEKRHIIKENKVPYVTRER 59

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  LDHPF   LY  F+        + +   G+L     K     F  T  RFY AE+
Sbjct: 60  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEI 117

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           + ALEYLH  GII+RDLKPEN+L+  D HI ++DF  +                      
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA---------------------- 155

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                          ++   E   AR+ SFVGT +YVSPE+ + 
Sbjct: 156 -------------------------------KVLSPESKQARANSFVGTAQYVSPELLTE 184

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
            S   + D WA G  IY+++ G  PF A +     + I+K    F    P       ARD
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFP-KARD 239

Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEIP 426
           L+  LL  D   RLG +   G   +K HPFF+ + +  +   TPP++ 
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT 287

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (526), Expect = 8e-64
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 77/349 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF LH+ +G G  G V+L     ++++         +A+K + K+V+     V    +EK
Sbjct: 3   DFILHKMLGKGSFGKVFLA----EFKKTN-----QFFAIKALKKDVVLMDDDVECTMVEK 53

Query: 141 KILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
           ++L +  +HPFL  ++  F+       VME+ +GGDL          +F L+ A FYAAE
Sbjct: 54  RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAE 111

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           +++ L++LH  GI+YRDLK +N+L+  DGHI ++D                         
Sbjct: 112 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIAD------------------------- 146

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FG  K   L            A++ +F GT +Y++PE+  
Sbjct: 147 --------------------FGMCKENMLGD----------AKTNTFCGTPDYIAPEILL 176

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
           G  + ++VDWW+FG+ +YEM+ G++PF     E    +I      +P           A+
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE-----AK 231

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           DL+  L  ++P  RLG      D++ HP F+ +N+  +  + + PP  P
Sbjct: 232 DLLVKLFVREPEKRLGV---RGDIRQHPLFREINWEELERKEIDPPFRP 277

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  204 bits (519), Expect = 2e-62
 Identities = 79/346 (22%), Positives = 121/346 (34%), Gaps = 72/346 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +D+H  +G G  G V+        R          +A K V       K+ V +   E 
Sbjct: 27  HYDIHEELGTGAFGVVHRV----TERATG-----NNFAAKFVMTPHESDKETVRK---EI 74

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           + + +L HP L  L+  FE  N   ++ EF SGG+L      + H + S   A  Y  +V
Sbjct: 75  QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQV 133

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
              L ++H    ++ DLKPEN++  +     L   D                        
Sbjct: 134 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG---------------------- 171

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                      L+  L+                              GT E+ +PEVA G
Sbjct: 172 -----------LTAHLDPKQ---------------------SVKVTTGTAEFAAPEVAEG 199

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
              G   D W+ G+  Y ++ G +PF   +++ TLRN+          + S +SE   +D
Sbjct: 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGKD 258

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
            I  LL  DP  R+           HP+    N     S  P    
Sbjct: 259 FIRKLLLADPNTRM----TIHQALEHPWLTPGNAPGRDSQIPSSRY 300

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  203 bits (518), Expect = 3e-62
 Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 75/356 (21%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           LT  DF +HR IG G  G VY C   +  +         +YAMK ++K+ ++ K+    A
Sbjct: 1   LTMNDFSVHRIIGRGGFGEVYGCRKADTGK---------MYAMKCLDKKRIKMKQGETLA 51

Query: 137 EMEK---KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             E+    ++   D PF+  +   F   +    +++  +GGDLH    +  H  FS    
Sbjct: 52  LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADM 109

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
           RFYAAE+++ LE++H   ++YRDLKP N+L+   GH+ +SD  L+               
Sbjct: 110 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA--------------- 154

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
                                     F  KK         ++A  V  +           
Sbjct: 155 ------------------------CDFSKKKPHASVGTHGYMAPEVLQK----------- 179

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
                 G ++ ++ DW++ G  +++++ G +PF     +     I +  LT   + P S 
Sbjct: 180 ------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSF 232

Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
           S    R L+ GLL +D   RLG   RGA +VK  PFF+ L++ ++  +   PP IP
Sbjct: 233 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 287

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 2e-61
 Identities = 78/345 (22%), Positives = 122/345 (35%), Gaps = 79/345 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +++   +G G  G VY                  L A KV++ +    ++++    +E 
Sbjct: 13  FWEIIGELGDGAFGKVYKAQNKETSV---------LAAAKVIDTK---SEEELEDYMVEI 60

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            IL   DHP +  L   F   N   I++EFC+GG + ++  +   +  + +  +    + 
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQT 119

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L AL YLH   II+RDLK  N+L   DG I L+DF                         
Sbjct: 120 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG------------------------ 155

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-- 318
                      +S    R                       R  SF+GT  +++PEV   
Sbjct: 156 -----------VSAKNTRTI--------------------QRRDSFIGTPYWMAPEVVMC 184

Query: 319 ---SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
                  +    D W+ GI + EM     P    +    L  I K       Q PS  S 
Sbjct: 185 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ-PSRWSS 243

Query: 376 YHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSL 420
            + +D +   L K+   R       + +  HPF    +   IR L
Sbjct: 244 -NFKDFLKKCLEKNVDARW----TTSQLLQHPFVTVDSNKPIREL 283

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 3e-60
 Identities = 68/331 (20%), Positives = 118/331 (35%), Gaps = 73/331 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D+DL + +G G  G V L                   A+K+V+ +      +    + E 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEE---------AVAVKIVDMKRAVDCPE--NIKKEI 54

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I KML+H  +   Y      N   + +E+CSGG+L                A+ +  ++
Sbjct: 55  CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQL 112

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           +  + YLH +GI +RD+KPEN+L+    ++ +SDF L+                      
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA---------------------- 150

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                           +F             GT  YV+PE+   
Sbjct: 151 -------------------------------TVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
              H   VD W+ GI +  M+ G  P+  PS+     +  K+  T+       +      
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDS-APL 237

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
            L+  +L ++P  R+       D+K   ++ 
Sbjct: 238 ALLHKILVENPSARI----TIPDIKKDRWYN 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 1e-59
 Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 79/335 (23%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
              DF++ R +G G  G VYL                 + A+KV+ K  LEK    H+  
Sbjct: 4   ALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLR 54

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E +I   L HP +  LY  F  +    +++E+   G ++    K    +F       Y 
Sbjct: 55  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYI 112

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML-SDFDLSLCSNAIPAVESPASSPEA 256
            E+  AL Y H   +I+RD+KPEN        ++L S  +L +                 
Sbjct: 113 TELANALSYCHSKRVIHRDIKPEN--------LLLGSAGELKIAD--------------- 149

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                  FG       +            R  +  GT +Y+ PE
Sbjct: 150 -----------------------FGWSVHAPSS------------RRTTLCGTLDYLPPE 174

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           +  G  H   VD W+ G+  YE + G+ PF A + + T + I +   TFP          
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG---- 230

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
            ARDLIS LL  +P  R        +V  HP+   
Sbjct: 231 -ARDLISRLLKHNPSQRP----MLREVLEHPWITA 260

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  193 bits (492), Expect = 6e-59
 Identities = 81/365 (22%), Positives = 135/365 (36%), Gaps = 72/365 (19%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +D    +G G    V L                 L A+K + K+ LE K+     E E 
Sbjct: 10  IYDFRDVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKKALEGKEG--SMENEI 58

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +L  + HP +  L   +E+     ++M+  SGG+L     +     ++   A     +V
Sbjct: 59  AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQV 116

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L A++YLH LGI++RDLKPEN+L  S       D  + +    +  +E P S        
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYSLDE----DSKIMISDFGLSKMEDPGS-------- 164

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                                       +  GT  YV+PEV + 
Sbjct: 165 -----------------------------------------VLSTACGTPGYVAPEVLAQ 183

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             +  AVD W+ G+  Y ++ G  PF   ++      I+K    F +     +S+  A+D
Sbjct: 184 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD-SAKD 242

Query: 381 LISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPDQK 440
            I  L+ KDP  R            HP+  G + AL +++       +++        Q 
Sbjct: 243 FIRHLMEKDPEKRF----TCEQALQHPWIAG-DTALDKNIHQSVSEQIKKNFAKSKWKQA 297

Query: 441 IKSQS 445
             + +
Sbjct: 298 FNATA 302

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  189 bits (482), Expect = 6e-58
 Identities = 67/339 (19%), Positives = 115/339 (33%), Gaps = 73/339 (21%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVL------EKKKK 132
           + +++    +G G    V  C     ++          YA+K+++          E ++ 
Sbjct: 2   YENYEPKEILGRGVSSVVRRC----IHKPTC-----KEYAVKIIDVTGGGSFSAEEVQEL 52

Query: 133 VHRAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
                 E  IL+ +  HP +  L   +E + F  +V +    G+L     +      S  
Sbjct: 53  REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEK 110

Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
             R     +L  +  LH L I++RDLKPEN+L+  D +I L+DF  S   +    +    
Sbjct: 111 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 170

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
            +P   +P                                                    
Sbjct: 171 GTPSYLAP--------------------------------------------------EI 180

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
                  +   +G  VD W+ G+ +Y ++ G  PF        LR I+     F +    
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 240

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             S+   +DL+S  L   P  R      A +   HPFF+
Sbjct: 241 DYSD-TVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 274

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  187 bits (475), Expect = 2e-56
 Identities = 71/334 (21%), Positives = 108/334 (32%), Gaps = 80/334 (23%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + F   R IG G  G VY           R      + A+K ++    +  +K      E
Sbjct: 15  KLFSDLREIGHGSFGAVYFA---------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            + L+ L HP        +   + + +VME+C G     L   +  K             
Sbjct: 66  VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHG 123

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
            L  L YLH   +I+RD+K  N+L+   G + L D                         
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD------------------------- 158

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                               FGS  I                 + SFVGT  +++PEV  
Sbjct: 159 --------------------FGSASIMA--------------PANSFVGTPYWMAPEVIL 184

Query: 320 GGSHGN---AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
               G     VD W+ GI   E+   + P    +  + L +I +     P       SEY
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SPALQSGHWSEY 242

Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
             R+ +   L K P +R      +  +  H F  
Sbjct: 243 -FRNFVDSCLQKIPQDRP----TSEVLLKHRFVL 271

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 2e-56
 Identities = 68/368 (18%), Positives = 122/368 (33%), Gaps = 74/368 (20%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
           +  + +   +G G+ G V+ C                 Y  K V      K       + 
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRC-----VETSSKKT----YMAKFVKV----KGTDQVLVKK 50

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  IL +  H  +  L+  FE+     ++ EF SG D+    +       +      Y  
Sbjct: 51  EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVH 109

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           +V  AL++LH   I + D++PEN++ ++     +   +                      
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE---------------------- 147

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                                FG  +      N                   EY +PEV 
Sbjct: 148 ---------------------FGQARQLKPGDNF-----------RLLFTAPEYYAPEVH 175

Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
                  A D W+ G  +Y ++ G  PF A +N+  + NI+    TF  ++   +S   A
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI-EA 234

Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTMPFPD 438
            D +  LL K+  +R+     A++   HP+ K      + +     +   R   T+   D
Sbjct: 235 MDFVDRLLVKERKSRM----TASEALQHPWLKQ-KIERVSTKVIRTLKHRRYYHTLIKKD 289

Query: 439 QKIKSQST 446
             +   + 
Sbjct: 290 LNMVVSAA 297

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  185 bits (471), Expect = 3e-56
 Identities = 66/320 (20%), Positives = 115/320 (35%), Gaps = 68/320 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            ++L   +G G +  V+L          R        A+KV+  ++        R   E 
Sbjct: 8   RYELGEILGFGGMSEVHLA---------RDLRLHRDVAVKVLRADLARDPSFYLRFRREA 58

Query: 141 KILKMLDHPFLPTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
           +    L+HP +  +Y   EA         IVME+  G  L  + H       +   A   
Sbjct: 59  QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEV 116

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
            A+   AL + H  GII+RD+KP N+++ +   + + DF ++                ++
Sbjct: 117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA------------IADS 164

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
            +  +QT                                           +GT +Y+SPE
Sbjct: 165 GNSVTQTAA----------------------------------------VIGTAQYLSPE 184

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
            A G S     D ++ G  +YE++ G  PF   S  +     V++    P+     +S  
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA- 243

Query: 377 HARDLISGLLNKDPCNRLGS 396
               ++   L K+P NR  +
Sbjct: 244 DLDAVVLKALAKNPENRYQT 263

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (470), Expect = 5e-56
 Identities = 76/350 (21%), Positives = 128/350 (36%), Gaps = 73/350 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK---VHRAE 137
            +D    +G+G    V  C         R       YA K + K   +  ++       E
Sbjct: 11  YYDTGEELGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E  ILK + HP + TL+  +E      +++E  +GG+L     +   +  +   A  + 
Sbjct: 62  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFL 119

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            ++L  + YLH L I + DLKPEN+++                                 
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRN----------------------------- 150

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                        +    +  F  + KI                   +  GT E+V+PE+
Sbjct: 151 -----------VPKPRIKIIDFGLAHKIDFGN------------EFKNIFGTPEFVAPEI 187

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
            +    G   D W+ G+  Y ++ G +PF   + + TL N+      F  +  S+ S   
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA-L 246

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
           A+D I  LL KDP  R+       D   HP+ K  +   AL  + + P+ 
Sbjct: 247 AKDFIRRLLVKDPKKRM----TIQDSLQHPWIKPKDTQQALSSAWSHPQF 292

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 1e-54
 Identities = 61/320 (19%), Positives = 116/320 (36%), Gaps = 74/320 (23%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
                + +RIG+G  GTVY    +               A+K++N       +++   + 
Sbjct: 7   DGQITVGQRIGSGSFGTVYKGKWHGDV------------AVKMLNVTAP-TPQQLQAFKN 53

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  +L+   H  +      +  +    IV ++C G  L+   H     +F +      A 
Sbjct: 54  EVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIAR 111

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           +    ++YLH   II+RDLK  N+ +  D  + + DF                       
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF----------------------- 148

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                        L+   +R+ GS + +                     G+  +++PEV 
Sbjct: 149 ------------GLATVKSRWSGSHQFEQ------------------LSGSILWMAPEVI 178

Query: 319 SG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS--PSSM 373
                  +    D +AFGI +YE++ G+ P++  +N   +  +V +    P  S   S+ 
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238

Query: 374 SEYHARDLISGLLNKDPCNR 393
            +   + L++  L K    R
Sbjct: 239 PK-AMKRLMAECLKKKRDER 257

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 2e-54
 Identities = 65/337 (19%), Positives = 115/337 (34%), Gaps = 82/337 (24%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D+++   IG G  G         + + D       +   K ++   + + +K      E 
Sbjct: 5   DYEVLYTIGTGSYGRCQKI----RRKSDG-----KILVWKELDYGSMTEAEK-QMLVSEV 54

Query: 141 KILKMLDHPFLPTLYAEF--EASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFY 196
            +L+ L HP +   Y       +    IVME+C GGDL S+  +  +  +          
Sbjct: 55  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 114

Query: 197 AAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPA 251
             ++ +AL+  H        +++RDLKP NV +    ++ L D                 
Sbjct: 115 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD----------------- 157

Query: 252 SSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
                                       FG  +I     +             +FVGT  
Sbjct: 158 ----------------------------FGLARILNHDTSFAK----------AFVGTPY 179

Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           Y+SPE  +  S+    D W+ G  +YE+     PF A S +     I +         P 
Sbjct: 180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI---PY 236

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
             S+    ++I+ +LN    +R        ++  +P 
Sbjct: 237 RYSD-ELNEIITRMLNLKDYHRP----SVEEILENPL 268

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 1e-53
 Identities = 62/338 (18%), Positives = 119/338 (35%), Gaps = 83/338 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R       IG G   TVY         +          A   +    L K ++  R + E
Sbjct: 9   RFLKFDIEIGRGSFKTVYKGLDTETTVE---------VAWCELQDRKLTKSER-QRFKEE 58

Query: 140 KKILKMLDHPFLPTLYAEFEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
            ++LK L HP +   Y  +E++        +V E  + G L +   +   K   +   R 
Sbjct: 59  AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRS 116

Query: 196 YAAEVLVALEYLHMLG--IIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNAIPAVESPAS 252
           +  ++L  L++LH     II+RDLK +N+ +    G + + D                  
Sbjct: 117 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD------------------ 158

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                       G   ++  +  +            + +GT E+
Sbjct: 159 ---------------------------LGLATLKRASFAK------------AVIGTPEF 179

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
           ++PE+     +  +VD +AFG+ + EM     P++   N   +   V   +   +    +
Sbjct: 180 MAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA 238

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
           + E   +++I G + ++   R        D+  H FF+
Sbjct: 239 IPE--VKEIIEGCIRQNKDERY----SIKDLLNHAFFQ 270

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 2e-52
 Identities = 101/353 (28%), Positives = 150/353 (42%), Gaps = 74/353 (20%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           +T  DFD  + +G G  G V L          R       YAMK++ KEV+  K +V   
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILV---------REKATGRYYAMKILRKEVIIAKDEVAHT 52

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E ++L+   HPFL  L   F+  +  C VME+ +GG+L     +   + F+   ARFY
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFY 110

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
            AE++ ALEYLH   ++YRD       ++ +  ++  D  + +                 
Sbjct: 111 GAEIVSALEYLHSRDVVYRD-------IKLENLMLDKDGHIKITD--------------- 148

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                  FG  K        +           +F GT EY++PE
Sbjct: 149 -----------------------FGLCKEGISDGATM----------KTFCGTPEYLAPE 175

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
           V     +G AVDWW  G+ +YEM+ GR PF    +E     I+ + + FP          
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE---- 231

Query: 377 HARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFKGLNFALI--RSLTPPEIP 426
            A+ L++GLL KDP  RLG     A +V  H FF  +N+  +  + L PP  P
Sbjct: 232 -AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (430), Expect = 3e-50
 Identities = 58/333 (17%), Positives = 116/333 (34%), Gaps = 77/333 (23%)

Query: 86  RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM 145
           + +G+G+ GTV       K       +     A+K++  E  +   K      E  +++ 
Sbjct: 13  KELGSGNFGTVKKGYYQMK-------KVVKTVAVKILKNEANDPALK-DELLAEANVMQQ 64

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           LD+P++  +    EA ++  +VME    G L+    +  ++     +      +V + ++
Sbjct: 65  LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMK 121

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYT 265
           YL     ++RDL   NVL+ +  +  +SDF LS                           
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------------------------- 154

Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
                       +   + +                          ++ +PE  +     +
Sbjct: 155 ------------KALRADENYYKA-------------QTHGKWPVKWYAPECINYYKFSS 189

Query: 326 AVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHARDLIS 383
             D W+FG+ ++E   YG+ P+           + K + +  P   P  M      DL++
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM-----YDLMN 244

Query: 384 GLLNKDPCNRLGSKRGAADVKT---HPFFKGLN 413
                D  NR     G A V+    + ++  +N
Sbjct: 245 LCWTYDVENRP----GFAAVELRLRNYYYDVVN 273

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 7e-50
 Identities = 67/375 (17%), Positives = 124/375 (33%), Gaps = 90/375 (24%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
             + +G G  G V         ++ +       +A+K++        +   +A  E ++ 
Sbjct: 16  TSQVLGLGINGKVLQI----FNKRTQ-----EKFALKML--------QDCPKARREVELH 58

Query: 144 -KMLDHPFLPTLYAEFEAS----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
            +    P +  +   +E          IVME   GG+L S    +  + F+   A     
Sbjct: 59  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 118

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIPAVESPASSPE 255
            +  A++YLH + I +RD+KPEN+L  S   +  + L+DF  +              +  
Sbjct: 119 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------------KETTS 166

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
             S  +  YT  Y                                            V+P
Sbjct: 167 HNSLTTPCYTPYY--------------------------------------------VAP 182

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL----RNIVKKPLTFPTQSPS 371
           EV     +  + D W+ G+ +Y ++ G  PF +             I      FP    S
Sbjct: 183 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 242

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
            +SE   + LI  LL  +P  R+       +   HP+           L    +    ++
Sbjct: 243 EVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 297

Query: 432 KTMPFPDQKIKSQST 446
           +     ++   + +T
Sbjct: 298 RWEDVKEEMTSALAT 312

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (423), Expect = 3e-49
 Identities = 58/315 (18%), Positives = 97/315 (30%), Gaps = 64/315 (20%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           +D  L  ++G G  G V     +    +          A+K +  +VL + + +     E
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTV------SVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
              +  LDH  L  LY          +V E    G L     K     F L +   YA +
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQ 119

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           V   + YL     I+RDL   N+L+ +   + + DF L                      
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM--------------------- 158

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                             R         +                       + +PE   
Sbjct: 159 ------------------RALPQNDDHYVM-------------QEHRKVPFAWCAPESLK 187

Query: 320 GGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
             +  +A D W FG+ ++EM  YG+ P+   +    L  I K+    P   P    +   
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPEDCPQ-DI 244

Query: 379 RDLISGLLNKDPCNR 393
            +++       P +R
Sbjct: 245 YNVMVQCWAHKPEDR 259

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  166 bits (422), Expect = 8e-49
 Identities = 64/335 (19%), Positives = 112/335 (33%), Gaps = 66/335 (19%)

Query: 61  FAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMK 120
           F +     A       +      + + IGAG+ G V               +     A+K
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG------HLKLPGKREIFVAIK 60

Query: 121 VVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLR 180
            +     EK+++      E  I+   DHP +  L      S    I+ EF   G L S  
Sbjct: 61  TLKSGYTEKQRR--DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 118

Query: 181 HKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC 240
            +    +F++         +   ++YL  +  ++RDL   N+LV S+    +SDF LS  
Sbjct: 119 RQN-DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS-- 175

Query: 241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA 300
                                                RF                ++P  
Sbjct: 176 -------------------------------------RFLEDDT-----------SDPTY 187

Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV 359
             +        + +PE        +A D W++GI ++E++ YG  P+   +N+  +  I 
Sbjct: 188 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE 247

Query: 360 KKP-LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           +   L  P   PS++       L+     KD  +R
Sbjct: 248 QDYRLPPPMDCPSAL-----HQLMLDCWQKDRNHR 277

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 1e-48
 Identities = 56/316 (17%), Positives = 99/316 (31%), Gaps = 76/316 (24%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           +D    + +G G  G V       +Y            A+K++ +  + +         E
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYD----------VAIKMIKEGSMSED----EFIEE 49

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
            K++  L H  L  LY          I+ E+ + G L +    +   RF          +
Sbjct: 50  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKD 108

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           V  A+EYL     ++RDL   N LV   G + +SDF LS                     
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS--------------------- 147

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
                             R+    +  +                        +  PEV  
Sbjct: 148 ------------------RYVLDDEYTSSV---------------GSKFPVRWSPPEVLM 174

Query: 320 GGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYH 377
                +  D WAFG+ ++E+   G+ P+   +N  T  +I +   L  P  +   +    
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV---- 230

Query: 378 ARDLISGLLNKDPCNR 393
              ++    ++    R
Sbjct: 231 -YTIMYSCWHEKADER 245

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 8e-48
 Identities = 54/308 (17%), Positives = 108/308 (35%), Gaps = 70/308 (22%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD 147
           +G G+ G+V       + +Q          A+KV+ +    +K        E +I+  LD
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGT--EKADTEEMMREAQIMHQLD 67

Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYL 207
           +P++  L    +A     +VME   GG LH     +  +   +++      +V + ++YL
Sbjct: 68  NPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL 125

Query: 208 HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQ 267
                ++RDL   NVL+ +  +  +SDF LS                             
Sbjct: 126 EEKNFVHRDLAARNVLLVNRHYAKISDFGLS----------------------------- 156

Query: 268 YSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV 327
                     +  G+                      +     ++ +PE  +     +  
Sbjct: 157 ----------KALGADDSYYTA-------------RSAGKWPLKWYAPECINFRKFSSRS 193

Query: 328 DWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHARDLISGL 385
           D W++G+ ++E + YG+ P+        +  I + K +  P + P  +       L+S  
Sbjct: 194 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL-----YALMSDC 248

Query: 386 LNKDPCNR 393
                 +R
Sbjct: 249 WIYKWEDR 256

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 9e-48
 Identities = 50/358 (13%), Positives = 107/358 (29%), Gaps = 85/358 (23%)

Query: 59  SDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYA 118
           +++ Y   R   +  K      + +  + +G+G  G V                     A
Sbjct: 16  NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNA----TAYGISKTGVSIQVA 71

Query: 119 MKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLH 177
           +K++ ++    +++      E K++  L  H  +  L      S    ++ E+C  GDL 
Sbjct: 72  VKMLKEKADSSERE--ALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 129

Query: 178 SLRHKQPHK---------------------RFSLTSARFYAAEVLVALEYLHMLGIIYRD 216
           +    +  K                       +      +A +V   +E+L     ++RD
Sbjct: 130 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 189

Query: 217 LKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFL 276
           L   NVLV     + + DF L+                                      
Sbjct: 190 LAARNVLVTHGKVVKICDFGLA-------------------------------------- 211

Query: 277 NRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
                          R  +++       +     ++++PE    G +    D W++GI +
Sbjct: 212 ---------------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 256

Query: 337 YEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           +E+   G  P+     +     +++         P   +E     ++      D   R
Sbjct: 257 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMD--QPFYATE-EIYIIMQSCWAFDSRKR 311

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (405), Expect = 1e-46
 Identities = 65/352 (18%), Positives = 108/352 (30%), Gaps = 88/352 (25%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
                L  ++G G  G V++ + N   R           A+K +    +  +        
Sbjct: 16  RESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE----AFLQ 61

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E +++K L H  L  LYA         IV E+ S G L      +  K   L      AA
Sbjct: 62  EAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 120

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   + Y+  +  ++RDL+  N+LV  +    ++DF L+                    
Sbjct: 121 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-------------------- 160

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R     +                          ++ +PE A
Sbjct: 161 -------------------RLIEDNEYTARQ---------------GAKFPIKWTAPEAA 186

Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
             G      D W+FGI + E+   GR P+    N   L  + +    +    P    E  
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPE-S 242

Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKT--HPFFKGLNFALIRSLTPPEIPG 427
             DL+     K+P  R         ++     +F         S  P   PG
Sbjct: 243 LHDLMCQCWRKEPEERP----TFEYLQAFLEDYFT--------STEPQYQPG 282

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (404), Expect = 2e-46
 Identities = 54/316 (17%), Positives = 101/316 (31%), Gaps = 74/316 (23%)

Query: 79  FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM 138
                L  R+GAG  G V++   N               A+K + +  +           
Sbjct: 12  RETLKLVERLGAGQFGEVWMGYYNGH----------TKVAVKSLKQGSMSPD----AFLA 57

Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
           E  ++K L H  L  LYA         I+ E+   G L          + ++      AA
Sbjct: 58  EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116

Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAAS 258
           ++   + ++     I+RDL+  N+LV       ++DF L+                    
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-------------------- 156

Query: 259 PRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
                              R     +                          ++ +PE  
Sbjct: 157 -------------------RLIEDNEYTARE---------------GAKFPIKWTAPEAI 182

Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
           + G+     D W+FGI + E++ +GR P+   +N   ++N+ +    +    P +  E  
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPE-E 238

Query: 378 ARDLISGLLNKDPCNR 393
              L+     + P +R
Sbjct: 239 LYQLMRLCWKERPEDR 254

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 4e-46
 Identities = 65/339 (19%), Positives = 113/339 (33%), Gaps = 89/339 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVH---RAE 137
            + +   +G+G  G+VY        R           A+K V K+ +    ++    R  
Sbjct: 5   QYQVGPLLGSGGFGSVYSG-----IRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 55

Query: 138 MEKKILKMLD--HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           ME  +LK +      +  L   FE  +   +++E             +         AR 
Sbjct: 56  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARS 114

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIPAVESPASSP 254
           +  +VL A+ + H  G+++RD+K EN+L+  + G + L D                    
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID-------------------- 154

Query: 255 EAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
                                    FGS  +   T                F GT  Y  
Sbjct: 155 -------------------------FGSGALLKDTVY------------TDFDGTRVYSP 177

Query: 315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
           PE       HG +   W+ GI +Y+M+ G  PF           I++  + F  +  S  
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSE- 230

Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
                + LI   L   P +R        +++ HP+ + +
Sbjct: 231 ----CQHLIRWCLALRPSDRP----TFEEIQNHPWMQDV 261

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 1e-45
 Identities = 68/334 (20%), Positives = 109/334 (32%), Gaps = 36/334 (10%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           DF+    +GAG+ G V+  S               + A K+++ E+  K    ++   E 
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGL---------VMARKLIHLEI--KPAIRNQIIREL 55

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           ++L   + P++   Y  F +     I ME   GG L  +  K    R         +  V
Sbjct: 56  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAV 113

Query: 201 LVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASP 259
           +  L YL     I++RD+KP N+LV S G I L DF +S          S   +    SP
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSP 172

Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
             +     YS +   +     G   ++                        E        
Sbjct: 173 E-RLQGTHYSVQSDIWS---MGLSLVEMAVGRYPIPPP----------DAKELELMFGCQ 218

Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
                                YG       +    L  IV +P   P + PS +     +
Sbjct: 219 VEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP---PPKLPSGVFSLEFQ 275

Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
           D ++  L K+P  R         +  H F K  +
Sbjct: 276 DFVNKCLIKNPAERA----DLKQLMVHAFIKRSD 305

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 2e-44
 Identities = 73/366 (19%), Positives = 115/366 (31%), Gaps = 103/366 (28%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            ++   +IG G  G V+      ++R+          A+K V  E  EK+     A  E 
Sbjct: 11  KYEKLAKIGQGTFGEVFKA----RHRKTG-----QKVALKKVLME-NEKEGFPITALREI 60

Query: 141 KILKMLDHPFLPTLY--------AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
           KIL++L H  +  L                   +V +FC               +F+L+ 
Sbjct: 61  KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGL--LSNVLVKFTLSE 118

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
            +     +L  L Y+H   I++RD+K  NVL+  DG + L+DF L+              
Sbjct: 119 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------- 164

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                    R F   K                    + V T  Y
Sbjct: 165 -------------------------RAFSLAKNSQPNRY------------TNRVVTLWY 187

Query: 313 VSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
             PE+  G   +G  +D W  G  + EM          + +  L  I +   +   +   
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247

Query: 372 SMSEY---------------------------HARDLISGLLNKDPCNRLGSKRGAADVK 404
           ++  Y                           +A DLI  LL  DP  R+     + D  
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI----DSDDAL 303

Query: 405 THPFFK 410
            H FF 
Sbjct: 304 NHDFFW 309

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  153 bits (388), Expect = 6e-44
 Identities = 52/337 (15%), Positives = 99/337 (29%), Gaps = 88/337 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           + +  R IG G  G V+          +         A+K++ +E     +     + E 
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTM----VAVKMLKEEASADMQA--DFQREA 67

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH--------------- 185
            ++   D+P +  L          C++ E+ + GDL+                       
Sbjct: 68  ALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 127

Query: 186 -------KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
                     S       A +V   + YL     ++RDL   N LV  +  + ++DF LS
Sbjct: 128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 187

Query: 239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP 298
                                                                R   +  
Sbjct: 188 -----------------------------------------------------RNIYSAD 194

Query: 299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRN 357
                 +      ++ PE      +    D WA+G+ ++E+  YG  P+   ++E  +  
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 254

Query: 358 IVK-KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
           +     L  P   P  +      +L+    +K P +R
Sbjct: 255 VRDGNILACPENCPLEL-----YNLMRLCWSKLPADR 286

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 2e-43
 Identities = 64/315 (20%), Positives = 108/315 (34%), Gaps = 71/315 (22%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
             +L R IG G  G V+               P    A+K       +  ++  +   E 
Sbjct: 8   RIELGRCIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEA 59

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
             ++  DHP +  L       N   I+ME C+ G+L S    +      L S   YA ++
Sbjct: 60  LTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQL 117

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
             AL YL     ++RD+   NVLV S+  + L DF                         
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF------------------------- 152

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                      LSR++                    +    ++       ++++PE  + 
Sbjct: 153 ----------GLSRYME-------------------DSTYYKASKGKLPIKWMAPESINF 183

Query: 321 GSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHA 378
               +A D W FG+ ++E++ +G  PF    N   +  I   + L  P   P ++     
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL----- 238

Query: 379 RDLISGLLNKDPCNR 393
             L++     DP  R
Sbjct: 239 YSLMTKCWAYDPSRR 253

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  150 bits (380), Expect = 6e-43
 Identities = 52/317 (16%), Positives = 97/317 (30%), Gaps = 70/317 (22%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           +   D  +  ++G G  G VY                    A+K + ++ +E +      
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEVE----EF 60

Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
             E  ++K + HP L  L           I+ EF + G+L     +   +  S     + 
Sbjct: 61  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 120

Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEA 256
           A ++  A+EYL     I+RDL   N LV  +  + ++DF LS                  
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS------------------ 162

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
                                R                                ++ +PE
Sbjct: 163 ---------------------RLMTGDTYTAHA---------------GAKFPIKWTAPE 186

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
             +        D WAFG+ ++E+           + + +  +++K        P    E 
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME--RPEGCPE- 243

Query: 377 HARDLISGLLNKDPCNR 393
              +L+      +P +R
Sbjct: 244 KVYELMRACWQWNPSDR 260

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 2e-42
 Identities = 49/331 (14%), Positives = 101/331 (30%), Gaps = 80/331 (24%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
                + +GAG  G V   +     + D         A+K++       +++      E 
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT----VAVKMLKPSAHLTERE--ALMSEL 77

Query: 141 KILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---------------- 183
           K+L  L +H  +  L         + ++ E+C  GDL +   ++                
Sbjct: 78  KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137

Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
                 L     ++ +V   + +L     I+RDL   N+L+       + DF L+     
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA----- 192

Query: 244 IPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
                                                           R    +      
Sbjct: 193 ------------------------------------------------RDIKNDSNYVVK 204

Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKP 362
            +     ++++PE      +    D W++GIF++E+   G +P+     ++    ++K+ 
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264

Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
                 SP         D++    + DP  R
Sbjct: 265 FRML--SPEHAPA-EMYDIMKTCWDADPLKR 292

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  148 bits (375), Expect = 4e-42
 Identities = 64/354 (18%), Positives = 106/354 (29%), Gaps = 95/354 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +    +IG G  G VY    N              +A+K +  E  E +        E 
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYG----------ETFALKKIRLEK-EDEGIPSTTIREI 51

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ILK L H  +  LY          +V E         L            +A+ +  ++
Sbjct: 52  SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQL 109

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  + Y H   +++RDLKP+N+L+  +G + ++DF L+                      
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI----------------- 152

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                 +K         + A  V   S                 
Sbjct: 153 --------------------PVRKYTHEIVTLWYRAPDVLMGS----------------- 175

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH--- 377
             +   +D W+ G    EM+ G   F   S    L  I +   T  +++  +++E     
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235

Query: 378 ---------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                                  DL+S +L  DP  R+     A     H +FK
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI----TAKQALEHAYFK 285

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 4e-42
 Identities = 69/357 (19%), Positives = 110/357 (30%), Gaps = 93/357 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F    +IG G  G VY           R      + A+K +  +  E +     A  E 
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +LK L+HP +  L       N   +V EF    DL             L   + Y  ++
Sbjct: 53  SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  L + H   +++RDLKP+N+L+ ++G I L+DF L+                      
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------- 154

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                 +          + A  +                 +   
Sbjct: 155 --------------------PVRTYTHEVVTLWYRAPEI-----------------LLGC 177

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH--- 377
             +  AVD W+ G    EM+  R  F   S    L  I +   T        ++      
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 378 ---------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
                                 R L+S +L+ DP  R+     A     HPFF+ + 
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI----SAKAALAHPFFQDVT 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 2e-41
 Identities = 58/345 (16%), Positives = 108/345 (31%), Gaps = 74/345 (21%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              + R +G G  G VY        + +         A+K VN+    +++     E   
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETR----VAIKTVNEAASMRERIEFLNEAS- 75

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR--------FSLTS 192
            ++K  +   +  L         + ++ME  + GDL S                  SL+ 
Sbjct: 76  -VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
               A E+   + YL+    ++RDL   N +V  D  + + DF +               
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM--------------- 179

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
                                                  R         +    +    +
Sbjct: 180 --------------------------------------TRDIYETDYYRKGGKGLLPVRW 201

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQSPS 371
           +SPE    G      D W+FG+ ++E+      P+   SNE  LR +++  L      P 
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---PD 258

Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVK--THPFFKGLNF 414
           +  +    +L+      +P  R       + +K    P F+ ++F
Sbjct: 259 NCPD-MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 302

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (370), Expect = 7e-41
 Identities = 61/390 (15%), Positives = 111/390 (28%), Gaps = 101/390 (25%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           +     IG G  G V     N    +          A+K ++    E +    R   E K
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPF--EHQTYCQRTLREIK 58

Query: 142 ILKMLDHPFLPTLYAEFEASNFS----CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           IL    H  +  +     A          ++    G DL+ L   Q     S     ++ 
Sbjct: 59  ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFL 115

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAA 257
            ++L  L+Y+H   +++RDLKP N+L+ +   + + DF                      
Sbjct: 116 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--------------------- 154

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                         L+R  +                            +V T  Y +PE+
Sbjct: 155 --------------LARVADP-----------------DHDHTGFLTEYVATRWYRAPEI 183

Query: 318 ASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
                 +  ++D W+ G  + EM+  R  F        L +I+    +   +  + +   
Sbjct: 184 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243

Query: 377 H--------------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                                      A DL+  +L  +P  R+           HP+ +
Sbjct: 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI----EVEQALAHPYLE 299

Query: 411 GLNFALIRSLTPPEIPGMRRQKTMPFPDQK 440
                    +             +P    K
Sbjct: 300 QYYDPSDEPIAEAPFKFDMELDDLPKEKLK 329

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  145 bits (367), Expect = 8e-41
 Identities = 56/336 (16%), Positives = 107/336 (31%), Gaps = 72/336 (21%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           + L R+IG+G  G +YL           G E     A+K+        K K  +  +E K
Sbjct: 9   YRLGRKIGSGSFGDIYLG-----TDIAAGEE----VAIKLECV-----KTKHPQLHIESK 54

Query: 142 ILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           I KM+     +PT+       +++ +VME                ++FSL +    A ++
Sbjct: 55  IYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLED--LFNFCSRKFSLKTVLLLADQM 112

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSNAIPAVESPASSPEAA 257
           +  +EY+H    I+RD+KP+N L+        + + DF L+                   
Sbjct: 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA------------------- 153

Query: 258 SPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
                               + +   +     P R          + +  GT  Y S   
Sbjct: 154 --------------------KKYRDARTHQHIPYR---------ENKNLTGTARYASINT 184

Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---KPLTFPTQSPSSMS 374
             G       D  + G  +     G  P+      T  +   +   K ++ P +      
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
                  ++   +    ++         +  + F +
Sbjct: 245 PSEFATYLNFCRSLRFDDKP-DYSYLRQLFRNLFHR 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 1e-40
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 65/313 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +F   + +G+G  GTVY            G +     A+K + +    K  K      E 
Sbjct: 10  EFKKIKVLGSGAFGTVYKG-----LWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 62

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            ++  +D+P +  L      S    ++ +    G L     +             +  ++
Sbjct: 63  YVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 120

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
              + YL    +++RDL   NVLV++  H+ ++DF L+                      
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA---------------------- 158

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                                          +L  AE     +       ++++ E    
Sbjct: 159 -------------------------------KLLGAEEKEYHAEGGKVPIKWMALESILH 187

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
             + +  D W++G+ ++E++   +        + + +I++K    P   P   +      
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP--QPPICTI-DVYM 244

Query: 381 LISGLLNKDPCNR 393
           ++      D  +R
Sbjct: 245 IMVKCWMIDADSR 257

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 1e-39
 Identities = 53/313 (16%), Positives = 92/313 (29%), Gaps = 63/313 (20%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
                + IGAG+ G VY   L          +     A+K +     EK++       E 
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLK-----TSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEA 60

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            I+    H  +  L           I+ E+   G L     ++    FS+         +
Sbjct: 61  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGI 119

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
              ++YL  +  ++RDL   N+LV S+    +SDF LS                      
Sbjct: 120 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS---------------------- 157

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                            R        T T             +        + +PE  S 
Sbjct: 158 -----------------RVLEDDPEATYT-------------TSGGKIPIRWTAPEAISY 187

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
               +A D W+FGI ++E++          +   +   +      P  +P          
Sbjct: 188 RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP--TPMDCPS-AIYQ 244

Query: 381 LISGLLNKDPCNR 393
           L+     ++   R
Sbjct: 245 LMMQCWQQERARR 257

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-39
 Identities = 60/357 (16%), Positives = 109/357 (30%), Gaps = 95/357 (26%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            ++   +IG G  GTV+       +          + A+K V  +  + +     A  E 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHE---------IVALKRVRLDD-DDEGVPSSALREI 52

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
            +LK L H  +  L+    +     +V EFC             +        + +  ++
Sbjct: 53  CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKY--FDSCNGDLDPEIVKSFLFQL 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPR 260
           L  L + H   +++RDLKP+N+L+  +G + L++                          
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLAN-------------------------- 144

Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
                              FG  +             PV   S   V         +   
Sbjct: 145 -------------------FGLARA---------FGIPVRCYSAEVVTLWYRPPDVLFGA 176

Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH-- 377
             +  ++D W+ G    E+     P F     +  L+ I +   T   +   SM++    
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236

Query: 378 ----------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
                                  RDL+  LL  +P  R+     A +   HP+F   
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYFSDF 289

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-39
 Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 77/333 (23%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           L      L + +G G  G V L       +           A+K++  +  EK       
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLS--DL 65

Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ------------ 183
             E +++KM+  H  +  L           +++E+ S G+L      +            
Sbjct: 66  ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 125

Query: 184 --PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
             P ++ S       A +V   +EYL     I+RDL   NVLV  D  + ++DF L+   
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--- 182

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                                                             R         
Sbjct: 183 --------------------------------------------------RDIHHIDYYK 192

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
           ++ +     ++++PE      + +  D W+FG+ ++E+   G +P+     E   + + +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
                    PS+ +      ++    +  P  R
Sbjct: 253 GH---RMDKPSNCTN-ELYMMMRDCWHAVPSQR 281

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (352), Expect = 2e-38
 Identities = 45/313 (14%), Positives = 102/313 (32%), Gaps = 68/313 (21%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKIL 143
            +  IG G  G VY  +L +   +          A+K +N+       +V +   E  I+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKI------HCAVKSLNRI--TDIGEVSQFLTEGIIM 82

Query: 144 KMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
           K   HP + +L      +     +V+ +   GDL +    + H   ++     +  +V  
Sbjct: 83  KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAK 141

Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQ 262
            +++L     ++RDL   N ++     + ++DF L+                        
Sbjct: 142 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA------------------------ 177

Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS 322
                          R    K+  ++                      ++++ E      
Sbjct: 178 ---------------RDMYDKEFDSVH------------NKTGAKLPVKWMALESLQTQK 210

Query: 323 HGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHARD 380
                D W+FG+ ++E++  G  P+   +       +++ + L  P   P  +      +
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL-----YE 265

Query: 381 LISGLLNKDPCNR 393
           ++    +     R
Sbjct: 266 VMLKCWHPKAEMR 278

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 5e-38
 Identities = 76/390 (19%), Positives = 126/390 (32%), Gaps = 118/390 (30%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +   + IG+G  G V        Y            A+K +++   + +    RA  E
Sbjct: 17  KRYQNLKPIGSGAQGIVCAA-----YDAVLDRN----VAIKKLSRP-FQNQTHAKRAYRE 66

Query: 140 KKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
             ++K ++H  + +L   F      E      +VME         ++ +  H+R      
Sbjct: 67  LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-----M 121

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASS 253
            +   ++L  +++LH  GII+RDLKP N++V+SD  + + DF L+               
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------- 166

Query: 254 PEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
               +  S   T    TR                                        Y 
Sbjct: 167 --RTAGTSFMMTPYVVTR---------------------------------------YYR 185

Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------------- 360
           +PEV  G  +   VD W+ G  + EM+  +  F           +++             
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245

Query: 361 --------------KPLTFPTQSPSSMSEYH----------ARDLISGLLNKDPCNRLGS 396
                           LTFP   P S+              ARDL+S +L  DP  R+  
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI-- 303

Query: 397 KRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
                D   HP+             PP+I 
Sbjct: 304 --SVDDALQHPYINVWYDPAEVEAPPPQIY 331

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 1e-37
 Identities = 67/373 (17%), Positives = 116/373 (31%), Gaps = 108/373 (28%)

Query: 74  KTGLTFRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK 132
           KT    R  +   + +G+G  G V                     A+K + +   + +  
Sbjct: 11  KTAWEVRAVYRDLQPVGSGAYGAVCSA---------VDGRTGAKVAIKKLYRP-FQSELF 60

Query: 133 VHRAEMEKKILKMLDHPFLPTLYAEFEASNFS------CIVMEFCSGGDLHSLRHKQPHK 186
             RA  E ++LK + H  +  L   F             +VM F        ++H+    
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---- 116

Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPA 246
           +      +F   ++L  L Y+H  GII+RDLKP N+ V  D  + + DF L+        
Sbjct: 117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA-------- 168

Query: 247 VESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
                                                ++      R + A          
Sbjct: 169 --------------------------------RQADSEMTGYVVTRWYRAPE-------- 188

Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
                     + +   +   VD W+ G  + EMI G+T F    +   L+ I+K   T P
Sbjct: 189 ---------VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239

Query: 367 TQSPSSMSEYH--------------------------ARDLISGLLNKDPCNRLGSKRGA 400
            +    +                              A +L+  +L  D   R+     A
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV----TA 295

Query: 401 ADVKTHPFFKGLN 413
            +   HP+F+ L+
Sbjct: 296 GEALAHPYFESLH 308

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  136 bits (343), Expect = 2e-37
 Identities = 47/322 (14%), Positives = 92/322 (28%), Gaps = 75/322 (23%)

Query: 82  FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKK 141
           + + RRIG G  G ++              +     A+K   +     +    +   E +
Sbjct: 7   YKVGRRIGEGSFGVIFEG-----TNLLNNQQ----VAIKFEPR-----RSDAPQLRDEYR 52

Query: 142 ILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
             K+L     +P +Y   +    + +V++    G           ++FS+ +    A ++
Sbjct: 53  TYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQM 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRS-----DGHIMLSDFDLSLCSNAIPAVESPASSPE 255
           L  ++ +H   ++YRD+KP+N L+          I + DF                    
Sbjct: 111 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG------------------- 151

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                           + +F       + I                   +  GT  Y+S 
Sbjct: 152 ----------------MVKFYRDPVTKQHIPY-------------REKKNLSGTARYMSI 182

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----KPLTFPTQSPS 371
               G       D  A G      + G  P+      T  +   +    K  T   +  +
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 242

Query: 372 SMSEYHARDLISGLLNKDPCNR 393
              E      +    N      
Sbjct: 243 GFPE-EFYKYMHYARNLAFDAT 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  137 bits (345), Expect = 4e-37
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 15/188 (7%)

Query: 74  KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKV 133
           K G  +  +D+   +G+G  G V+ C       +  G      +  K +N      K  V
Sbjct: 23  KQGSVYDYYDILEELGSGAFGVVHRC-----VEKATGRV----FVAKFINTPYPLDKYTV 73

Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
                E  I+  L HP L  L+  FE      +++EF SGG+L      + + + S    
Sbjct: 74  KN---EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEV 129

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNAIPAVESPA 251
             Y  +    L+++H   I++ D+KPEN++  +     + + DF L+   N    V+   
Sbjct: 130 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 189

Query: 252 SSPEAASP 259
           ++ E A+P
Sbjct: 190 ATAEFAAP 197

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  110 bits (275), Expect = 2e-27
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 5/146 (3%)

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
                  T E+ +PE+      G   D WA G+  Y ++ G +PFA   +  TL+N+ + 
Sbjct: 184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 243

Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLT 421
              F   + SS+S   A+D I  LL K+P  RL       D   HP+ KG +  L   + 
Sbjct: 244 DWEFDEDAFSSVSP-EAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLTSRIP 298

Query: 422 PPEIPGMRRQKTMPFPDQKIKSQSTA 447
                 +R++    + D      +  
Sbjct: 299 SSRYNKIRQKIKEKYADWPAPQPAIG 324

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 1e-36
 Identities = 46/329 (13%), Positives = 101/329 (30%), Gaps = 77/329 (23%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
              L + +G G  G V         +           A+K++ +     + +   +E  K
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRT----VAVKMLKEGATHSEHRALMSE-LK 68

Query: 141 KILKMLDHPFLPTL-YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK------------- 186
            ++ +  H  +  L  A  +      +++EFC  G+L +    + ++             
Sbjct: 69  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128

Query: 187 -RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIP 245
              +L     Y+ +V   +E+L     I+RDL   N+L+     + + DF L+       
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------- 181

Query: 246 AVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
                                                         R    +P   R   
Sbjct: 182 ----------------------------------------------RDIYKDPDYVRKGD 195

Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLT 364
                ++++PE      +    D W+FG+ ++E+     +P+     +      +K+   
Sbjct: 196 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 255

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNR 393
               +P   +       +    + +P  R
Sbjct: 256 MR--APDYTTP-EMYQTMLDCWHGEPSQR 281

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 1e-36
 Identities = 56/350 (16%), Positives = 103/350 (29%), Gaps = 104/350 (29%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           R   L   IG G  G V+      +             A+K+ +     ++++    E E
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRGE-----------EVAVKIFSS----REERSWFREAE 47

Query: 140 KKILKMLDHPFLPTLYAEFEASNFS----CIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
                ML H  +    A     N +     +V ++   G L    ++      ++     
Sbjct: 48  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIK 104

Query: 196 YAAEVLVALEYLHM--------LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAV 247
            A      L +LHM          I +RDLK +N+LV+ +G   ++D  L          
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL---------- 154

Query: 248 ESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
                     + R  + T       +                                 V
Sbjct: 155 ----------AVRHDSATDTIDIAPNH-------------------------------RV 173

Query: 308 GTHEYVSPEVASGGSHGN------AVDWWAFGIFIYEMIYGRTPF--------------- 346
           GT  Y++PEV     +          D +A G+  +E+    +                 
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233

Query: 347 AAPSNETTLRNIVKKPL--TFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
           + PS E   + + ++ L    P +  S  +      ++      +   RL
Sbjct: 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 283

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 2e-35
 Identities = 65/340 (19%), Positives = 118/340 (34%), Gaps = 56/340 (16%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            ++    IG G  G V+      +  ++ G       A+K V  +  E+   +     E 
Sbjct: 8   QYECVAEIGEGAYGKVFKA----RDLKNGGR----FVALKRVRVQTGEEGMPL-STIREV 58

Query: 141 KILKML---DHPFLPTLYAEFEASNFS-----CIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
            +L+ L   +HP +  L+     S         +V E        +   K P       +
Sbjct: 59  AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT-TYLDKVPEPGVPTET 117

Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPAS 252
            +    ++L  L++LH   +++RDLKP+N+LV S G I L+DF L+   +   A+ S   
Sbjct: 118 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 177

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
           +    +P        Y+T +  +     G    +      LF                  
Sbjct: 178 TLWYRAPE-VLLQSSYATPVDLW---SVGCIFAEMFRRKPLF------------------ 215

Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
                  G S  + +        I ++I        P +    R         P +   +
Sbjct: 216 ------RGSSDVDQLGK------ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT 263

Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
             +   +DL+   L  +P  R+     A    +HP+F+ L
Sbjct: 264 DIDELGKDLLLKCLTFNPAKRI----SAYSALSHPYFQDL 299

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 7e-35
 Identities = 62/374 (16%), Positives = 117/374 (31%), Gaps = 105/374 (28%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +     +G+G  G+V        +    G       A+K +++   +      R   E 
Sbjct: 19  RYQNLSPVGSGAYGSVCAA-----FDTKTGLR----VAVKKLSRP-FQSIIHAKRTYREL 68

Query: 141 KILKMLDHPFLPTLYAEFEASNF-----SCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
           ++LK + H  +  L   F  +          ++    G DL+++   Q   + +    +F
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQF 125

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPE 255
              ++L  L+Y+H   II+RDLKP N+ V  D  + + DF L+  ++             
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 172

Query: 256 AASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
                                       ++      R + A  +                
Sbjct: 173 ---------------------------DEMTGYVATRWYRAPEIMLNWM----------- 194

Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
                  +   VD W+ G  + E++ GRT F    +   L+ I++   T   +    +S 
Sbjct: 195 ------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248

Query: 376 YH--------------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
                                       A DL+  +L  D   R+     AA    H +F
Sbjct: 249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI----TAAQALAHAYF 304

Query: 410 KGLNFALIRSLTPP 423
              +      +  P
Sbjct: 305 AQYHDPDDEPVADP 318

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  130 bits (327), Expect = 7e-35
 Identities = 67/339 (19%), Positives = 117/339 (34%), Gaps = 54/339 (15%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           D+ L R++G G    V+              +      +K++      K  K  + + E 
Sbjct: 36  DYQLVRKLGRGKYSEVFEA-----INITNNEK----VVVKIL------KPVKKKKIKREI 80

Query: 141 KILKML-DHPFLPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
           KIL+ L   P + TL    +   S    +V E  +  D   L     ++  +    RFY 
Sbjct: 81  KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL-----YQTLTDYDIRFYM 135

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLCSNAIPAVESPASSPEA 256
            E+L AL+Y H +GI++RD+KP NV++  +   + L D+ L+   +         +S   
Sbjct: 136 YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195

Query: 257 ASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
             P      + Y   L               +      +A  +  +   F G   Y    
Sbjct: 196 KGPELLVDYQMYDYSLD--------------MWSLGCMLASMIFRKEPFFHGHDNY---- 237

Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FPTQSPSSMS 374
                     +        +Y+ I        P     L    +K       +++   +S
Sbjct: 238 -----DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 292

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
              A D +  LL  D  +RL     A +   HP+F  + 
Sbjct: 293 P-EALDFLDKLLRYDHQSRL----TAREAMEHPYFYTVV 326

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  128 bits (323), Expect = 2e-34
 Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 11/161 (6%)

Query: 78  TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAE 137
           + +DF + R +G G  G V+L          R       YAMKV+ KE++ + K+V    
Sbjct: 2   SLQDFQILRTLGTGSFGRVHLI---------RSRHNGRYYAMKVLKKEIVVRLKQVEHTN 52

Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
            E+ +L ++ HPF+  ++  F+ +    ++M++  GG+L SL      +RF    A+FYA
Sbjct: 53  DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYA 110

Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
           AEV +ALEYLH   IIYRDLKPEN+L+  +GHI ++DF  +
Sbjct: 111 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 151

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  108 bits (271), Expect = 3e-27
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 8/125 (6%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           +  GT +Y++PEV S   +  ++DWW+FGI IYEM+ G TPF   +   T   I+   L 
Sbjct: 160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR 219

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFKGLNFA--LIRSLT 421
           FP            +DL+S L+ +D   RLG+ + G  DVK HP+FK + +   L R++ 
Sbjct: 220 FPPFFNED-----VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIE 274

Query: 422 PPEIP 426
            P  P
Sbjct: 275 TPYEP 279

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 1e-33
 Identities = 48/333 (14%), Positives = 101/333 (30%), Gaps = 85/333 (25%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           L + D      IG G+ G V          + +        A+K + +   +   +    
Sbjct: 7   LDWNDIKFQDVIGEGNFGQVLKA-------RIKKDGLRMDAAIKRMKEYASKDDHR--DF 57

Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH---------- 185
             E ++L  L  HP +  L    E   +  + +E+   G+L     K             
Sbjct: 58  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 117

Query: 186 ----KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS 241
                  S      +AA+V   ++YL     I+RDL           +I++ +       
Sbjct: 118 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR--------NILVGE------- 162

Query: 242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA 301
                                     Y  +++ F                 L   + V  
Sbjct: 163 -------------------------NYVAKIADF----------------GLSRGQEVYV 181

Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
           +         +++ E  +   +    D W++G+ ++E++  G TP+   +       + +
Sbjct: 182 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 241

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
               +  + P +  +    DL+     + P  R
Sbjct: 242 G---YRLEKPLNCDD-EVYDLMRQCWREKPYER 270

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (316), Expect = 1e-33
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 15/159 (9%)

Query: 80  RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEME 139
           + +    +IG G  GTVY            G E     A++ +N +   KK+ +     E
Sbjct: 20  KKYTRFEKIGQGASGTVYTA-----MDVATGQE----VAIRQMNLQQQPKKELIIN---E 67

Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
             +++   +P +      +   +   +VME+ +GG L  +  +                E
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM---DEGQIAAVCRE 124

Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
            L ALE+LH   +I+RD+K +N+L+  DG + L+DF   
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 7e-24
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
           + VGT  +++PEV +  ++G  VD W+ GI   EMI G  P+   +    L  I     T
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-T 233

Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
              Q+P  +S    RD ++  L+ D   R      A ++  H F K      + SLTP
Sbjct: 234 PELQNPEKLSA-IFRDFLNRCLDMDVEKRG----SAKELLQHQFLKIAKP--LSSLTP 284

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 2e-33
 Identities = 70/376 (18%), Positives = 121/376 (32%), Gaps = 68/376 (18%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
            +   + IG G  G VY   L +            L A+K V ++   K +       E 
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGE---------LVAIKKVLQDKRFKNR-------EL 64

Query: 141 KILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSA 193
           +I++ LDH  +  L   F +S       +  +V+++         RH  +  +   +   
Sbjct: 65  QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124

Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLSLCSNAIPAVESPAS 252
           + Y  ++  +L Y+H  GI +RD+KP+N+L+  D  ++ L DF  +          S   
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184

Query: 253 SPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
           S    +P        Y++ +  +     G    + L    +F                  
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWS---AGCVLAELLLGQPIF------------------ 223

Query: 313 VSPEVASGGSHGNAVD--WWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
                  G S  + +       G    E I    P         ++      +  P   P
Sbjct: 224 ------PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277

Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRR 430
                  A  L S LL   P  RL       +   H FF  L    ++     + P    
Sbjct: 278 ------EAIALCSRLLEYTPTARL----TPLEACAHSFFDELRDPNVKLPNGRDTP---- 323

Query: 431 QKTMPFPDQKIKSQST 446
                F  Q++ S   
Sbjct: 324 -ALFNFTTQELSSNPP 338

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 2e-33
 Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 17/160 (10%)

Query: 77  LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRA 136
           L  ++  L + IG G+ G V L                   A+K +  +           
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKND-----ATAQAF 47

Query: 137 EMEKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
             E  ++  L H  L  L     E      IV E+ + G L      +            
Sbjct: 48  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 107

Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
           ++ +V  A+EYL     ++RDL   NVLV  D    +SDF
Sbjct: 108 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF 147

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 3e-14
 Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 5/90 (5%)

Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPL 363
           +     ++ +PE           D W+FGI ++E+  +GR P+     +  +  + K   
Sbjct: 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-- 216

Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            +   +P         +++    + D   R
Sbjct: 217 -YKMDAPDGCPP-AVYEVMKNCWHLDAAMR 244

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 1e-32
 Identities = 62/338 (18%), Positives = 102/338 (30%), Gaps = 50/338 (14%)

Query: 88  IGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKK--VHRAEMEKKILKM 145
           +G G   TVY     N  +         + A+K +      + K      A  E K+L+ 
Sbjct: 6   LGEGQFATVYKARDKNTNQ---------IVAIKKIKLGHRSEAKDGINRTALREIKLLQE 56

Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
           L HP +  L   F   +   +V +F        ++        + +  + Y    L  LE
Sbjct: 57  LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLE 114

Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIPAVESPASSPEAASPRSQTY 264
           YLH   I++RDLKP N+L+  +G + L+DF L+    +   A      +    +P     
Sbjct: 115 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG 174

Query: 265 TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHG 324
            R Y   +  +     G    + L                                   G
Sbjct: 175 ARMYGVGVDMW---AVGCILAELLLRVPFL----------------------------PG 203

Query: 325 NAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISG 384
           ++       IF          +    +          P        S+  +    DLI G
Sbjct: 204 DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD-DLLDLIQG 262

Query: 385 LLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
           L   +PC R+     A       +F            P
Sbjct: 263 LFLFNPCARI----TATQALKMKYFSNRPGPTPGCQLP 296

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  124 bits (312), Expect = 1e-32
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 12/197 (6%)

Query: 42  PTSKSSPENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSL 101
             +K   E  S+K   +       ++      +       FD  + +G G  G V L   
Sbjct: 4   AAAKKGSEQESVKEFLAKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV-- 60

Query: 102 NNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS 161
                  +  E    YAMK+++K+ + K K++     EK+IL+ ++ PFL  L   F+ +
Sbjct: 61  -------KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113

Query: 162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
           +   +VME+ +GG++ S   +    RFS   ARFYAA++++  EYLH L +IYRDLKPEN
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171

Query: 222 VLVRSDGHIMLSDFDLS 238
           +L+   G+I ++DF  +
Sbjct: 172 LLIDQQGYIQVTDFGFA 188

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (254), Expect = 1e-24
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
            A+ V  R+ +  GT E ++PE+     +  AVDWWA G+ IYEM  G  PF A      
Sbjct: 187 FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR-GAADVKTHPFFKGLN 413
              IV   + FP+   S       +DL+  LL  D   R G+ + G  D+K H +F   +
Sbjct: 247 YEKIVSGKVRFPSHFSSD-----LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301

Query: 414 FALI--RSLTPPEIP 426
           +  I  R +  P IP
Sbjct: 302 WIAIYQRKVEAPFIP 316

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (308), Expect = 2e-32
 Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 11/176 (6%)

Query: 66  IRSATF-GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNK 124
           +R+A   G    +   +F+L + +G G  G V+L       R+  GH+   LYAMKV+ K
Sbjct: 9   LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLV------RKISGHDTGKLYAMKVLKK 62

Query: 125 E-VLEKKKKVHRAEMEKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHK 182
             +++K K       E+++L+ +   PFL TL+  F+      +++++ +GG+L +   +
Sbjct: 63  ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ 122

Query: 183 QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
              +RF+    + Y  E+++ALE+LH LGIIYRD+K EN+L+ S+GH++L+DF LS
Sbjct: 123 --RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 176

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 2e-26
 Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 6/129 (4%)

Query: 303 SCSFVGTHEYVSPEVASGG--SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
           +  F GT EY++P++  GG   H  AVDWW+ G+ +YE++ G +PF     + +   I +
Sbjct: 187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 246

Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI-- 417
           + L      P  MS   A+DLI  LL KDP  RLG   R A ++K H FF+ +N+  +  
Sbjct: 247 RILKSEPPYPQEMSA-LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAA 305

Query: 418 RSLTPPEIP 426
           + +  P  P
Sbjct: 306 KKVPAPFKP 314

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 4e-31
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 15/157 (9%)

Query: 81  DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK 140
           +    + IG+G  G V+L    NK +           A+K + +  + ++  +     E 
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWLNKDK----------VAIKTIREGAMSEEDFIE----EA 51

Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
           +++  L HP L  LY         C+V EF   G L      Q    F+  +      +V
Sbjct: 52  EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDV 110

Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
              + YL    +I+RDL   N LV  +  I +SDF +
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 147

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 2e-13
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET 353
           FV +     S       ++ SPEV S   + +  D W+FG+ ++E+           + +
Sbjct: 150 FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 209

Query: 354 TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
            +   +          P   S  H   +++    + P +R
Sbjct: 210 EVVEDISTGFRLY--KPRLAST-HVYQIMNHCWKERPEDR 246

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  103 bits (258), Expect = 3e-25
 Identities = 74/428 (17%), Positives = 132/428 (30%), Gaps = 133/428 (31%)

Query: 76  GLTFRD--FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKV 133
           G  ++D  + L R++G G   TV+L     K   +         AMK+V  +    K   
Sbjct: 7   GEPYKDARYILVRKLGWGHFSTVWLA----KDMVNN-----THVAMKIVRGD----KVYT 53

Query: 134 HRAEMEKKILKMLDHPFLPTL-------------YAEFEASNFSCIVMEFCSGGDLH-SL 179
             AE E K+L+ ++                    +   +  N   +VM F   G+   +L
Sbjct: 54  EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 113

Query: 180 RHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
             K  H+   L   +  + ++L+ L+Y+H   GII+ D+KPENV                
Sbjct: 114 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV---------------- 157

Query: 239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP 298
                                                +      + +  +    L  A  
Sbjct: 158 ------------------------------------LMEIVDSPENLIQIKIADLGNACW 181

Query: 299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI 358
                 + + T EY SPEV  G   G   D W+    I+E+I G   F      +  ++ 
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 241

Query: 359 --------------------------------------------VKKPLTFPTQSPSSMS 374
                                                       ++  LT   +     +
Sbjct: 242 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 301

Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKTM 434
           +    D +S +L  DP  R      A  +  HP+ K  +   +  +  P+         +
Sbjct: 302 K-EISDFLSPMLQLDPRKRA----DAGGLVNHPWLK--DTLGMEEIRVPDRELYGSGSDI 354

Query: 435 PFPDQKIK 442
           P   ++++
Sbjct: 355 PGWFEEVR 362

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 82.1 bits (202), Expect = 7e-19
 Identities = 32/215 (14%), Positives = 67/215 (31%), Gaps = 54/215 (25%)

Query: 84  LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK--- 140
           + + +G G    V+ C        ++  E      +K         KK   + +      
Sbjct: 4   IGKLMGEGKESAVFNC------YSEKFGE----CVVKFHKVGHTSFKKVKEKRDYGDLHF 53

Query: 141 ------------KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
                       + L+ L    +P +YA       + ++ME             +   R 
Sbjct: 54  SVLAIRSARNEFRALQKLQGLAVPKVYAWEG----NAVLMELI---------DAKELYRV 100

Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVE 248
            + +       +L  +   +  GI++ DL   NVLV S+  I + DF  S+         
Sbjct: 101 RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV-SEEGIWIIDFPQSV--------- 150

Query: 249 SPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSK 283
                 E      +    +    +  + +R + ++
Sbjct: 151 ------EVGEEGWREILERDVRNIITYFSRTYRTE 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	451
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.73
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.31
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.06
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.47
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.28
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.05

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-64  Score=476.81  Aligned_cols=274  Identities=37%  Similarity=0.622  Sum_probs=240.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+.+|++++++++||||+++++++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~---------~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~   78 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSR---------EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ   78 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE
Confidence            689999999999999999999987765         49999999876666666778889999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++.+|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+
T Consensus        79 ~~~~~~ivmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~  156 (288)
T d1uu3a_          79 DDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK  156 (288)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ECCEEEEEEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccce
Confidence            999999999999999999988765  569999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                     .......+.+||+.|||||++.
T Consensus       157 ~~~~~-----------------------------------------------------~~~~~~~~~~GT~~Y~APE~~~  183 (288)
T d1uu3a_         157 VLSPE-----------------------------------------------------SKQARANSFVGTAQYVSPELLT  183 (288)
T ss_dssp             ECC---------------------------------------------------------------CCCCGGGCCHHHHH
T ss_pred             ecccC-----------------------------------------------------CcccccccccCCccccCceeec
Confidence            43211                                                     0111223458999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..|+.++|||||||++|+|++|+.||.+.+..+.+.++......++...     +.++++||++||+.||.+|||    
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~~li~~~L~~dP~~R~t----  254 (288)
T d1uu3a_         184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKF-----FPKARDLVEKLLVLDATKRLG----  254 (288)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTC-----CHHHHHHHHTTSCSSGGGSTT----
T ss_pred             cCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccC-----CHHHHHHHHHHccCCHhHCcC----
Confidence            99999999999999999999999999999999999999998877665432     338999999999999999999    


Q ss_pred             hHH------HHcCCCcCCCCcccccccCCCCCC
Q 013016          400 AAD------VKTHPFFKGLNFALIRSLTPPEIP  426 (451)
Q Consensus       400 ~~e------ll~hp~~~~~~~~~~~~~~~~~~p  426 (451)
                      ++|      +++||||++++|..+....||.+|
T Consensus       255 ~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP~l~  287 (288)
T d1uu3a_         255 CEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT  287 (288)
T ss_dssp             SGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCCC
T ss_pred             HHHHcCCHHHHcCCccCCCCHHHhhcCCCCCCC
Confidence            665      689999999999999888888887

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-62  Score=476.49  Aligned_cols=284  Identities=38%  Similarity=0.691  Sum_probs=249.5

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +++++|++++.||+|+||+||+|+++.+++         .||||++.+...........+.+|+.+|++++||||+++++
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~---------~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~   72 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY   72 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence            456899999999999999999999987765         49999999887666666777888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      +|.+.+++|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||
T Consensus        73 ~~~~~~~~~iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG  150 (337)
T d1o6la_          73 AFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG  150 (337)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             eeccccccccceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecc
Confidence            999999999999999999999998875  559999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|+....                                                       .......++||+.|||||
T Consensus       151 ~a~~~~~-------------------------------------------------------~~~~~~~~~GT~~Y~aPE  175 (337)
T d1o6la_         151 LCKEGIS-------------------------------------------------------DGATMKTFCGTPEYLAPE  175 (337)
T ss_dssp             TCBCSCC-------------------------------------------------------TTCCBCCCEECGGGCCGG
T ss_pred             ccccccc-------------------------------------------------------CCcccccceeCHHHhhhh
Confidence            9853211                                                       011223468999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..|+.++|||||||++|||++|+.||.+.+..+.+..+..+.+.+|...     +.++++||++||++||.+|++.
T Consensus       176 ~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~dli~~~L~~dP~~R~~~  250 (337)
T d1o6la_         176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL-----SPEAKSLLAGLLKKDPKQRLGG  250 (337)
T ss_dssp             GGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTS-----CHHHHHHHHHHTCSSTTTSTTC
T ss_pred             hccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccC-----CHHHHHHHHhhccCCchhhccc
Confidence            99999999999999999999999999999999999999999999887766543     3389999999999999999964


Q ss_pred             CC-ChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          397 KR-GAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       397 ~~-~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                      .+ .++|+++||||++++|..+  +.+.||.+|....+
T Consensus       251 ~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~  288 (337)
T d1o6la_         251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSE  288 (337)
T ss_dssp             STTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSST
T ss_pred             ccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCCh
Confidence            32 2899999999999999754  67788888877654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-62  Score=460.56  Aligned_cols=257  Identities=33%  Similarity=0.573  Sum_probs=229.7

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.+.||+|+||+||+|+++.+++         .||+|++.+...........+.+|+.++++++|||||+++++
T Consensus         4 ~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~---------~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~   74 (263)
T d2j4za1           4 ALEDFEIGRPLGKGKFGNVYLAREKQSKF---------ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY   74 (263)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             chhHeEEEEEEecCCCcEEEEEEECCCCc---------EEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            35889999999999999999999987765         499999988766666666778889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +.+++.+|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        75 ~~~~~~~~ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~  152 (263)
T d2j4za1          75 FHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW  152 (263)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCS
T ss_pred             EEECCEEEEEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccce
Confidence            99999999999999999999998865  4599999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |.....                                                         ......+||+.|||||+
T Consensus       153 a~~~~~---------------------------------------------------------~~~~~~~Gt~~Y~APE~  175 (263)
T d2j4za1         153 SVHAPS---------------------------------------------------------SRRTTLCGTLDYLPPEM  175 (263)
T ss_dssp             CSCCCC---------------------------------------------------------CCCEETTEEGGGCCHHH
T ss_pred             eeecCC---------------------------------------------------------CcccccCCCCcccCHHH
Confidence            843210                                                         11123479999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.+....+|..     .+.++++||.+||+.||++|||  
T Consensus       176 ~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~~li~~~L~~dp~~R~t--  248 (263)
T d2j4za1         176 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-----VTEGARDLISRLLKHNPSQRPM--  248 (263)
T ss_dssp             HTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTT-----SCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             HcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCcc-----CCHHHHHHHHHHccCCHhHCcC--
Confidence            999999999999999999999999999999998899999998887766543     3348999999999999999999  


Q ss_pred             CChHHHHcCCCcCC
Q 013016          398 RGAADVKTHPFFKG  411 (451)
Q Consensus       398 ~~~~ell~hp~~~~  411 (451)
                        ++|+|+||||++
T Consensus       249 --~~eil~hp~~~~  260 (263)
T d2j4za1         249 --LREVLEHPWITA  260 (263)
T ss_dssp             --HHHHHTCHHHHH
T ss_pred             --HHHHHcCcCcCC
Confidence              999999999975

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.5e-61  Score=464.18  Aligned_cols=278  Identities=38%  Similarity=0.738  Sum_probs=243.2

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      +++|+++++||+|+||+||+|+++.+++         .||||++.+.........+.+.+|+.++++++|||||++++++
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~---------~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   73 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGR---------YYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF   73 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCC---------EEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeE
Confidence            4789999999999999999999987665         4999999987766666677888999999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++++|+|||||.||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|
T Consensus        74 ~~~~~~~ivmE~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a  151 (316)
T d1fota_          74 QDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA  151 (316)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eeCCeeeeEeeecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccc
Confidence            9999999999999999999988875  45899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +....                                                          ...+.+||+.|||||++
T Consensus       152 ~~~~~----------------------------------------------------------~~~~~~Gt~~Y~APE~l  173 (316)
T d1fota_         152 KYVPD----------------------------------------------------------VTYTLCGTPDYIAPEVV  173 (316)
T ss_dssp             EECSS----------------------------------------------------------CBCCCCSCTTTCCHHHH
T ss_pred             eEecc----------------------------------------------------------ccccccCcccccCHHHH
Confidence            53221                                                          11235899999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC-C
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-K  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~-~  397 (451)
                      .+..|+.++|||||||++|+|++|+.||.+.+..+.+.++..+...++...     +.++.++|.+||++||.+|++. .
T Consensus       174 ~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~~li~~~L~~dp~~R~~~~r  248 (316)
T d1fota_         174 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF-----NEDVKDLLSRLITRDLSQRLGNLQ  248 (316)
T ss_dssp             TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTS-----CHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             cCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHHhhhCHHhccccch
Confidence            999999999999999999999999999999999999999998876665432     3389999999999999999732 1


Q ss_pred             CChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          398 RGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       398 ~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ..+++||+||||++++|..+  +...+|.+|....
T Consensus       249 ~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~  283 (316)
T d1fota_         249 NGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQ  283 (316)
T ss_dssp             TTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC--
T ss_pred             hhHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCC
Confidence            12999999999999999854  6777888886543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-60  Score=467.69  Aligned_cols=284  Identities=35%  Similarity=0.633  Sum_probs=247.5

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccce
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTL  154 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l  154 (451)
                      ....+++|+++++||+|+||+||+|+++.+++         .||||++.+.........+.+.+|+.+|+.++|||||++
T Consensus        36 ~~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~---------~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~  106 (350)
T d1rdqe_          36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGN---------HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL  106 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             CCCCccCeEEEEEeecCcCcEEEEEEECCCCC---------EEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeec
Confidence            33456899999999999999999999987765         499999988766666667788899999999999999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++...+.+++||||+.||+|.+++...  +.+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|
T Consensus       107 ~~~~~~~~~~~~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~D  184 (350)
T d1rdqe_         107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD  184 (350)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             ccccccccccccccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeee
Confidence            99999999999999999999999988775  4599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|+....                                                          ...+.+||+.|||
T Consensus       185 FG~a~~~~~----------------------------------------------------------~~~~~~Gt~~Y~A  206 (350)
T d1rdqe_         185 FGFAKRVKG----------------------------------------------------------RTWTLCGTPEALA  206 (350)
T ss_dssp             CTTCEECSS----------------------------------------------------------CBCCCEECGGGCC
T ss_pred             ceeeeeccc----------------------------------------------------------ccccccCccccCC
Confidence            999853221                                                          1123589999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ||++.+..|+.++|||||||++|+|+||+.||.+.+....+.++..+...++...     +.++.+||++||++||.+|+
T Consensus       207 PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----s~~~~~li~~~L~~dP~kR~  281 (350)
T d1rdqe_         207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF-----SSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTC-----CHHHHHHHHHHSCSCTTTCT
T ss_pred             HHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccC-----CHHHHHHHHHHhhhCHHhcc
Confidence            9999999999999999999999999999999999998999999988877665432     33899999999999999995


Q ss_pred             C-CCCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCCCC
Q 013016          395 G-SKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRRQK  432 (451)
Q Consensus       395 t-~~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~~  432 (451)
                      . ..+.++||++||||++++|..+  +.+.+|++|....+.
T Consensus       282 ~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~  322 (350)
T d1rdqe_         282 GNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG  322 (350)
T ss_dssp             TSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTT
T ss_pred             ccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCcc
Confidence            1 1222999999999999999754  667888899877543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-61  Score=452.70  Aligned_cols=259  Identities=25%  Similarity=0.419  Sum_probs=212.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|+++.+++         .||||++......  ...+.+.+|+.++++++|||||++++++.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~---------~vAiK~i~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~   73 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEE---------AVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRR   73 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEEehhhcc--hHHHHHHHHHHHHHhCCCCCEeeEeeeec
Confidence            789999999999999999999987765         4999999765322  23356778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++.+|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        74 ~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~  151 (271)
T d1nvra_          74 EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT  151 (271)
T ss_dssp             ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCceeEEEEeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhhe
Confidence            999999999999999999998654  569999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                     ..........+||+.|||||++.
T Consensus       152 ~~~~-----------------------------------------------------~~~~~~~~~~~GT~~Y~APE~~~  178 (271)
T d1nvra_         152 VFRY-----------------------------------------------------NNRERLLNKMCGTLPYVAPELLK  178 (271)
T ss_dssp             ECEE-----------------------------------------------------TTEECCBCCCCSCGGGSCTHHHH
T ss_pred             eecc-----------------------------------------------------CCccccccceeeCcCccCHhHhc
Confidence            3211                                                     00111223458999999999998


Q ss_pred             CCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          320 GGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       320 ~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      +..+ +.++|||||||++|||++|+.||....... .+..+.......+.  +. ..+.++.+||.+||+.||++|||  
T Consensus       179 ~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~--~~-~~s~~~~~li~~~L~~dP~~R~t--  253 (271)
T d1nvra_         179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--WK-KIDSAPLALLHKILVENPSARIT--  253 (271)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTT--GG-GSCHHHHHHHHHHSCSSTTTSCC--
T ss_pred             CCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCc--cc-cCCHHHHHHHHHHcCCChhHCcC--
Confidence            8776 678999999999999999999998765443 33333333222111  12 23348999999999999999999  


Q ss_pred             CChHHHHcCCCcCC
Q 013016          398 RGAADVKTHPFFKG  411 (451)
Q Consensus       398 ~~~~ell~hp~~~~  411 (451)
                        ++|+|+||||++
T Consensus       254 --~~eil~hpwf~~  265 (271)
T d1nvra_         254 --IPDIKKDRWYNK  265 (271)
T ss_dssp             --HHHHTTCTTTTC
T ss_pred             --HHHHhcCHhhCc
Confidence              999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-60  Score=459.69  Aligned_cols=277  Identities=34%  Similarity=0.719  Sum_probs=233.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHH-HCCCCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILK-MLDHPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~nIv~l~~~~  158 (451)
                      ++|++.+.||+|+||+||+|.++.+++         .||||++.+...........+..|..++. .++|||||++++++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~---------~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~   72 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF   72 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCC---------EEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEE
Confidence            689999999999999999999987765         49999998876555555566667777765 68999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++++|||||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        73 ~~~~~~yivmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a  150 (320)
T d1xjda_          73 QTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC  150 (320)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ccCCceeEEEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchh
Confidence            9999999999999999999999875  55999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +.....                                                       .......+||+.|+|||++
T Consensus       151 ~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~~  175 (320)
T d1xjda_         151 KENMLG-------------------------------------------------------DAKTNTFCGTPDYIAPEIL  175 (320)
T ss_dssp             BCCCCT-------------------------------------------------------TCCBCCCCSCGGGCCHHHH
T ss_pred             hhcccc-------------------------------------------------------cccccccCCCCCcCCHHHH
Confidence            532210                                                       1111234799999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      .+..|+.++|||||||++|+|++|+.||.+.+..+.+.++..+.+.++..     .+.++.+||++||++||++||+   
T Consensus       176 ~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~-----~s~~~~dli~~~L~~dP~~R~s---  247 (320)
T d1xjda_         176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW-----LEKEAKDLLVKLFVREPEKRLG---  247 (320)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHSCSSGGGSBT---
T ss_pred             cCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc-----CCHHHHHHHHHhcccCCCCCcC---
Confidence            99999999999999999999999999999999999999998887665543     2348999999999999999999   


Q ss_pred             ChH-HHHcCCCcCCCCcccc--cccCCCCCCCCCCC
Q 013016          399 GAA-DVKTHPFFKGLNFALI--RSLTPPEIPGMRRQ  431 (451)
Q Consensus       399 ~~~-ell~hp~~~~~~~~~~--~~~~~~~~p~~~~~  431 (451)
                       +. +|++||||++++|..+  +...||..|...++
T Consensus       248 -~~~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~  282 (320)
T d1xjda_         248 -VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP  282 (320)
T ss_dssp             -TBSCGGGSGGGTTCCHHHHHTTCSCC---------
T ss_pred             -HHHHHHhCchhccCCHHHHHhcCCCCCCCCCCCCc
Confidence             85 8999999999999754  66677888877664

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-59  Score=448.07  Aligned_cols=256  Identities=26%  Similarity=0.373  Sum_probs=219.0

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|.++.+++         .||||++.....   ...+.+.+|+.++++++|||||+++++|.
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~---------~vAvK~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~   87 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQ---------EVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYL   87 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCC---------EEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCC---------EEEEEEEecccC---hHHHHHHHHHHHHHhCCCCCEeeEeEEEE
Confidence            579999999999999999999887665         499999976532   23456778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|||||||+||+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|.
T Consensus        88 ~~~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~  164 (293)
T d1yhwa1          88 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA  164 (293)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ECCEEEEEEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhhe
Confidence            99999999999999999998876   359999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       .......+||+.|||||++.
T Consensus       165 ~~~~~-------------------------------------------------------~~~~~~~~gt~~Y~aPE~~~  189 (293)
T d1yhwa1         165 QITPE-------------------------------------------------------QSKRSTMVGTPYWMAPEVVT  189 (293)
T ss_dssp             ECCST-------------------------------------------------------TCCBCCCCSCGGGCCHHHHS
T ss_pred             eeccc-------------------------------------------------------cccccccccCCCccChhhhc
Confidence            33210                                                       11122348999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG  399 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~  399 (451)
                      +..|+.++|||||||++|+|++|+.||.+.+..+.+..+........ ..+ ...+.++++||.+||+.||.+|||    
T Consensus       190 ~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~s~~~~~li~~~L~~dP~~R~s----  263 (293)
T d1yhwa1         190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-QNP-EKLSAIFRDFLNRCLDMDVEKRGS----  263 (293)
T ss_dssp             SSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-SSG-GGSCHHHHHHHHHHTCSSTTTSCC----
T ss_pred             CCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC-CCc-ccCCHHHHHHHHHHccCChhHCcC----
Confidence            99999999999999999999999999998888777776665432211 111 223448999999999999999999    


Q ss_pred             hHHHHcCCCcCC
Q 013016          400 AADVKTHPFFKG  411 (451)
Q Consensus       400 ~~ell~hp~~~~  411 (451)
                      +.|+|+||||+.
T Consensus       264 ~~eil~Hp~~~~  275 (293)
T d1yhwa1         264 AKELLQHQFLKI  275 (293)
T ss_dssp             HHHHTTCGGGGG
T ss_pred             HHHHhcCHhhCC
Confidence            999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-59  Score=451.64  Aligned_cols=258  Identities=31%  Similarity=0.520  Sum_probs=213.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|++.+.||+|+||+||+|+++.+++         .||||++.+.....  ....+.+|+.++++++|||||++++++.
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~   77 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQK---------LVAIKCIAKKALEG--KEGSMENEIAVLHKIKHPNIVALDDIYE   77 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCC---------EEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCC---------EEEEEEEchHHhhh--HHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            569999999999999999999887665         49999998664432  2355678999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc---cCCCEEEeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR---SDGHIMLSDFD  236 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg  236 (451)
                      +++++|||||||+||+|.+++...  +.+++..+..++.||+.||+|||++||+||||||+|||+.   .++.+||+|||
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG  155 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG  155 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-
T ss_pred             ECCEEEEEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccc
Confidence            999999999999999999999764  5699999999999999999999999999999999999995   47899999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|+....                                                        .....+.+||+.|||||
T Consensus       156 ~a~~~~~--------------------------------------------------------~~~~~~~~GT~~y~APE  179 (307)
T d1a06a_         156 LSKMEDP--------------------------------------------------------GSVLSTACGTPGYVAPE  179 (307)
T ss_dssp             -------------------------------------------------------------------------CTTSCHH
T ss_pred             eeEEccC--------------------------------------------------------CCeeeeeeeCccccCcH
Confidence            9853211                                                        01112358999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      ++.+..|+.++|||||||++|+|++|+.||.+....+....+......++....+...+ ++++||.+||++||++||| 
T Consensus       180 ~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~R~s-  257 (307)
T d1a06a_         180 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD-SAKDFIRHLMEKDPEKRFT-  257 (307)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCH-HHHHHHHHHSCSSGGGSCC-
T ss_pred             HHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCH-HHHHHHHHHccCCHhHCcC-
Confidence            99999999999999999999999999999999988899999998877766655555544 8999999999999999999 


Q ss_pred             CCChHHHHcCCCcCC
Q 013016          397 KRGAADVKTHPFFKG  411 (451)
Q Consensus       397 ~~~~~ell~hp~~~~  411 (451)
                         +.|+|+||||++
T Consensus       258 ---~~eil~hp~~~~  269 (307)
T d1a06a_         258 ---CEQALQHPWIAG  269 (307)
T ss_dssp             ---HHHHHHSTTTTS
T ss_pred             ---HHHHhcCHhhCC
Confidence               999999999987

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.9e-59  Score=457.23  Aligned_cols=280  Identities=33%  Similarity=0.607  Sum_probs=228.3

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHH---HHHHHHHCCCCCccce
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEM---EKKILKMLDHPFLPTL  154 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---e~~~l~~l~h~nIv~l  154 (451)
                      ++++|++.++||+|+||+||+|+++.+++         .||||++.+...........+.+   ++.+++.++|||||++
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~---------~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l   72 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKADTGK---------MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM   72 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCE
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEECCCCC---------EEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence            46899999999999999999999987765         49999998766544433333333   4666777789999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      +++|.+.+.+|||||||+||+|.+++...  ..+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|
T Consensus        73 ~~~~~~~~~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~D  150 (364)
T d1omwa3          73 SYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD  150 (364)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECC
T ss_pred             EEEEEECCEEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEee
Confidence            99999999999999999999999999775  5589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|.....                                                         ......+||+.|||
T Consensus       151 FGla~~~~~---------------------------------------------------------~~~~~~~GT~~y~A  173 (364)
T d1omwa3         151 LGLACDFSK---------------------------------------------------------KKPHASVGTHGYMA  173 (364)
T ss_dssp             CTTCEECSS---------------------------------------------------------SCCCSCCSCGGGCC
T ss_pred             eceeeecCC---------------------------------------------------------Ccccccccccccch
Confidence            999853221                                                         11123479999999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      ||++.+ ..|+.++|||||||+||||+||+.||.......   ....+......++.    . .+.++++||.+||++||
T Consensus       174 PE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----~-~s~~~~~li~~~L~~dP  248 (364)
T d1omwa3         174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----S-FSPELRSLLEGLLQRDV  248 (364)
T ss_dssp             HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCS----S-SCHHHHHHHHHHTCSST
T ss_pred             hHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCC----C-CCHHHHHHHHHHcccCH
Confidence            999975 568999999999999999999999998754332   23333333333332    2 33489999999999999


Q ss_pred             CCcCCC-CCChHHHHcCCCcCCCCcccc--cccCCCCCCCCCC
Q 013016          391 CNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMRR  430 (451)
Q Consensus       391 ~~Rpt~-~~~~~ell~hp~~~~~~~~~~--~~~~~~~~p~~~~  430 (451)
                      ++|||. ...++||++||||++++|..+  +...+|.+|....
T Consensus       249 ~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~  291 (364)
T d1omwa3         249 NRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGE  291 (364)
T ss_dssp             TTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC-
T ss_pred             HHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCC
Confidence            999994 344799999999999999754  6778888886664

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=6.6e-59  Score=454.75  Aligned_cols=265  Identities=28%  Similarity=0.435  Sum_probs=229.0

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.++||+|+||+||+|+++.+++         .||||++.+....   ..+.+.+|+.+|++++|||||+++++
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~---------~vAvK~i~~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~   91 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGN---------NFAAKFVMTPHES---DKETVRKEIQTMSVLRHPTLVNLHDA   91 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTE---------EEEEEEECCCSHH---HHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEEcccchh---hHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34789999999999999999999987765         4999999765332   34567789999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc--CCCEEEecc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS--DGHIMLSDF  235 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~Df  235 (451)
                      +.+++++|||||||+||+|.+++... .+.+++..++.|+.||+.||+|||++|||||||||+|||++.  ++.+||+||
T Consensus        92 ~~~~~~~~ivmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DF  170 (350)
T d1koaa2          92 FEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF  170 (350)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCC
T ss_pred             EEECCEEEEEEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeec
Confidence            99999999999999999999988654 345999999999999999999999999999999999999964  578999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|......                                                        ....+.+||+.||||
T Consensus       171 G~a~~~~~~--------------------------------------------------------~~~~~~~gT~~Y~aP  194 (350)
T d1koaa2         171 GLTAHLDPK--------------------------------------------------------QSVKVTTGTAEFAAP  194 (350)
T ss_dssp             TTCEECCTT--------------------------------------------------------SCEEEECSCTTTCCH
T ss_pred             chheecccc--------------------------------------------------------cccceecCcccccCH
Confidence            998533210                                                        111235899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......++......+.+ ++++||.+||+.||++|||
T Consensus       195 Ev~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~R~t  273 (350)
T d1koaa2         195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMT  273 (350)
T ss_dssp             HHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCH-HHHHHHHHHCCSSGGGSCC
T ss_pred             HHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH-HHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999999988877666544443334 8999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCCCccc
Q 013016          396 SKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~~~~~  416 (451)
                          ++|||+||||++.++..
T Consensus       274 ----~~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         274 ----IHQALEHPWLTPGNAPG  290 (350)
T ss_dssp             ----HHHHHHSTTTSCTTCCS
T ss_pred             ----HHHHhcCcccCCCCCCC
Confidence                99999999999876643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-59  Score=445.97  Aligned_cols=265  Identities=27%  Similarity=0.428  Sum_probs=225.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHH---HHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKK---KKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ++|++.+.||+|+||+||+|+++.+++         .||||++.+......   ...+.+.+|+.+|++++|||||++++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~---------~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~   80 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGL---------QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE   80 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCC---------EEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            569999999999999999999987765         499999976533221   12456788999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC----CEEE
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIML  232 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~----~~kl  232 (451)
                      +|.+.+++|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++    .+||
T Consensus        81 ~~~~~~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl  158 (293)
T d1jksa_          81 VYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  158 (293)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEE
T ss_pred             EEEECCEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEe
Confidence            999999999999999999999999775  4699999999999999999999999999999999999999776    5999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||+|......                                                        .......||+.|
T Consensus       159 ~DfG~a~~~~~~--------------------------------------------------------~~~~~~~~t~~y  182 (293)
T d1jksa_         159 IDFGLAHKIDFG--------------------------------------------------------NEFKNIFGTPEF  182 (293)
T ss_dssp             CCCTTCEECTTS--------------------------------------------------------CBCSCCCCCGGG
T ss_pred             cchhhhhhcCCC--------------------------------------------------------ccccccCCCCcc
Confidence            999998533211                                                        111234789999


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       313 ~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      ||||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......++....+.. +.++++||++||+.||.+
T Consensus       183 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~  261 (293)
T d1jksa_         183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT-SALAKDFIRRLLVKDPKK  261 (293)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS-CHHHHHHHHTTSCSSGGG
T ss_pred             cCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCC-CHHHHHHHHHHccCChhH
Confidence            9999999989999999999999999999999999999999999999888766654433333 338999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcCCCCccc
Q 013016          393 RLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                      |||    ++|+|+||||++.++..
T Consensus       262 R~s----~~eil~hp~~~~~~~~~  281 (293)
T d1jksa_         262 RMT----IQDSLQHPWIKPKDTQQ  281 (293)
T ss_dssp             SCC----HHHHHHSTTTCC-----
T ss_pred             CcC----HHHHhcCcccCCCChhH
Confidence            999    99999999999977653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-59  Score=445.32  Aligned_cols=259  Identities=27%  Similarity=0.394  Sum_probs=220.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|++.++||+|+||+||+|+++.+++         .||||++.+..   ....+.+.+|++++++++|||||++++++.
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~   79 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSV---------LAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY   79 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECSS---SGGGGGTHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCe---------EEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            469999999999999999999987765         49999997542   234566778999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++.+|||||||+||+|.+++... .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|.
T Consensus        80 ~~~~~~lvmEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~  158 (288)
T d2jfla1          80 YENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA  158 (288)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eCCeEEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhh
Confidence            999999999999999999987654 2459999999999999999999999999999999999999999999999999984


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ....                                                       ......+.+||+.|||||++.
T Consensus       159 ~~~~-------------------------------------------------------~~~~~~~~~Gt~~y~APE~l~  183 (288)
T d2jfla1         159 KNTR-------------------------------------------------------TIQRRDSFIGTPYWMAPEVVM  183 (288)
T ss_dssp             ECHH-------------------------------------------------------HHHHHTCCCSCCTTCCHHHHT
T ss_pred             ccCC-------------------------------------------------------CcccccccccccccCCHHHHh
Confidence            2110                                                       001122458999999999984


Q ss_pred             -----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          320 -----GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       320 -----~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                           +..|+.++|||||||++|||++|+.||.+.+..+.+.++..+......  .+...+.++++||.+||+.||++||
T Consensus       184 ~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R~  261 (288)
T d2jfla1         184 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA--QPSRWSSNFKDFLKKCLEKNVDARW  261 (288)
T ss_dssp             TCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCS--SGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             hcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC--ccccCCHHHHHHHHHHccCChhHCc
Confidence                 455789999999999999999999999998888888888876543221  1223445899999999999999999


Q ss_pred             CCCCChHHHHcCCCcCCC
Q 013016          395 GSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       395 t~~~~~~ell~hp~~~~~  412 (451)
                      |    +.|||+||||+..
T Consensus       262 t----~~ell~hp~~~~~  275 (288)
T d2jfla1         262 T----TSQLLQHPFVTVD  275 (288)
T ss_dssp             C----HHHHTTSGGGCCC
T ss_pred             C----HHHHhcCcccCCC
Confidence            9    9999999999863

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.1e-58  Score=451.58  Aligned_cols=261  Identities=28%  Similarity=0.447  Sum_probs=228.1

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|+++++||+|+||+||+|+++.+++         .||||++.+....   ....+.+|+.+|++++|||||+++++
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~---------~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIv~~~~~   94 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGR---------VFVAKFINTPYPL---DKYTVKNEISIMNQLHHPKLINLHDA   94 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCSHH---HHHHHHHHHHHHTTCCSTTBCCEEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEECCcchh---HHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34789999999999999999999887765         4999999765332   23456779999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEc--cCCCEEEecc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR--SDGHIMLSDF  235 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~--~~~~~kl~Df  235 (451)
                      |.+++++|||||||+||+|.+++... ..++++..++.|+.||+.||+|||++||+||||||+||||+  .++.+||+||
T Consensus        95 ~~~~~~~~ivmE~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DF  173 (352)
T d1koba_          95 FEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF  173 (352)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred             EEECCEEEEEEEcCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeec
Confidence            99999999999999999998877554 34699999999999999999999999999999999999998  5789999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|......                                                        .......||+.||||
T Consensus       174 Gla~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aP  197 (352)
T d1koba_         174 GLATKLNPD--------------------------------------------------------EIVKVTTATAEFAAP  197 (352)
T ss_dssp             TTCEECCTT--------------------------------------------------------SCEEEECSSGGGCCH
T ss_pred             ccceecCCC--------------------------------------------------------CceeeccCcccccCH
Confidence            998533210                                                        111234799999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..|+.++|||||||++|+|+||+.||.+....+.+..+......++......+.+ ++.+||.+||++||.+|||
T Consensus       198 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dp~~R~s  276 (352)
T d1koba_         198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP-EAKDFIKNLLQKEPRKRLT  276 (352)
T ss_dssp             HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH-HHHHHHHTTSCSSGGGSCC
T ss_pred             HHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH-HHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999999999887777665555555 8999999999999999999


Q ss_pred             CCCChHHHHcCCCcCCC
Q 013016          396 SKRGAADVKTHPFFKGL  412 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~~  412 (451)
                          +.|+|+||||++.
T Consensus       277 ----~~eil~Hp~~~~~  289 (352)
T d1koba_         277 ----VHDALEHPWLKGD  289 (352)
T ss_dssp             ----HHHHHTSTTTSSC
T ss_pred             ----HHHHhcCHhhCCC
Confidence                9999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-59  Score=438.49  Aligned_cols=257  Identities=25%  Similarity=0.372  Sum_probs=210.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|+++.+++         .||||++...... ....+.+.+|++++++++|||||++++++.
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~   73 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGK---------ILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRII   73 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCC---------EEEEEEEChhhCC-HHHHHHHHHHHHHHHHCCCCCEeeEEEEEE
Confidence            789999999999999999999987765         4999999765432 334567888999999999999999999986


Q ss_pred             e--CCeEEEEEeeccCCchhhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeccCCCCcEEEccCCCE
Q 013016          160 A--SNFSCIVMEFCSGGDLHSLRHKQ--PHKRFSLTSARFYAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       160 ~--~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-----ivH~Dlkp~NIll~~~~~~  230 (451)
                      +  ++.+|||||||+||+|.+++...  ....+++..++.++.||+.||+|||++|     |+||||||+|||++.+|.+
T Consensus        74 ~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~v  153 (269)
T d2java1          74 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV  153 (269)
T ss_dssp             C----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCE
T ss_pred             eCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcE
Confidence            4  56789999999999999988643  2456999999999999999999999876     9999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||+|+.....                                                       .......+||+
T Consensus       154 kl~DFG~a~~~~~~-------------------------------------------------------~~~~~~~~gt~  178 (269)
T d2java1         154 KLGDFGLARILNHD-------------------------------------------------------TSFAKAFVGTP  178 (269)
T ss_dssp             EECCHHHHHHC------------------------------------------------------------------CCC
T ss_pred             EEeeccceeecccC-------------------------------------------------------CCccccCCCCc
Confidence            99999998543210                                                       01112358999


Q ss_pred             CccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       311 ~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      .|||||++.+..|+.++|||||||++|||+||+.||.+.+..+....+..+.....   + ...+.++.+||.+||+.||
T Consensus       179 ~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~---~-~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         179 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI---P-YRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             SCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---C-TTSCHHHHHHHHHHTCSSG
T ss_pred             ccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---C-cccCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999999999999999999888888888887754322   1 1234489999999999999


Q ss_pred             CCcCCCCCChHHHHcCCCc
Q 013016          391 CNRLGSKRGAADVKTHPFF  409 (451)
Q Consensus       391 ~~Rpt~~~~~~ell~hp~~  409 (451)
                      .+|||    +.|||+|||+
T Consensus       255 ~~Rps----~~ell~hp~i  269 (269)
T d2java1         255 YHRPS----VEEILENPLI  269 (269)
T ss_dssp             GGSCC----HHHHHTSTTC
T ss_pred             hHCcC----HHHHHhCCcC
Confidence            99999    9999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.9e-58  Score=444.05  Aligned_cols=254  Identities=25%  Similarity=0.342  Sum_probs=220.6

Q ss_pred             CceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        81 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      .|+++++||+|+||+||+|+++.+++         .||||++.+.........+.+.+|+.++++++|||||++++++.+
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~---------~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~   86 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR   86 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCc---------EEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE
Confidence            49999999999999999999887765         499999986654555666778899999999999999999999999


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      ++++|||||||.||+|..++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|..
T Consensus        87 ~~~~~iv~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~  164 (309)
T d1u5ra_          87 EHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI  164 (309)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred             CCEEEEEEEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccc
Confidence            99999999999999998766554  5699999999999999999999999999999999999999999999999999842


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ..                                                           .....+||+.|||||++.+
T Consensus       165 ~~-----------------------------------------------------------~~~~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         165 MA-----------------------------------------------------------PANSFVGTPYWMAPEVILA  185 (309)
T ss_dssp             SS-----------------------------------------------------------SBCCCCSCGGGCCHHHHTT
T ss_pred             cC-----------------------------------------------------------CCCccccCccccCHHHHhc
Confidence            11                                                           0113479999999999865


Q ss_pred             ---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          321 ---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       321 ---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                         ..|+.++|||||||++|||++|+.||.+....+.+..+..+......   +...+.++++||.+||+.||.+|||  
T Consensus       186 ~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rpt--  260 (309)
T d1u5ra_         186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPT--  260 (309)
T ss_dssp             TTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS---CTTSCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHCcCChhHCcC--
Confidence               45899999999999999999999999998888888888776543322   1223448999999999999999999  


Q ss_pred             CChHHHHcCCCcCC
Q 013016          398 RGAADVKTHPFFKG  411 (451)
Q Consensus       398 ~~~~ell~hp~~~~  411 (451)
                        ++|||+||||++
T Consensus       261 --~~ell~Hp~~~~  272 (309)
T d1u5ra_         261 --SEVLLKHRFVLR  272 (309)
T ss_dssp             --HHHHTTCHHHHS
T ss_pred             --HHHHHhCHHhcC
Confidence              999999999986

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-59  Score=454.10  Aligned_cols=262  Identities=28%  Similarity=0.402  Sum_probs=213.4

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|+++++||+|+||+||+|+++.+++         .||+|++++..  .......+.+|+.+|+.++|||||+++++|
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~---------~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~   73 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGL---------VMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAF   73 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTE---------EEEEEEEECCC--CTTHHHHHHHHGGGGGGCCCTTBCCEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCc---------EEEEEEEChhh--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3789999999999999999999887655         59999997542  223345677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      .+++++|||||||+||+|.+++.+.  +.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||+
T Consensus        74 ~~~~~~~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGl  151 (322)
T d1s9ja_          74 YSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV  151 (322)
T ss_dssp             ECSSEEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred             EECCEEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCC
Confidence            9999999999999999999999765  459999999999999999999997 5999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |....                                                         .....+++||+.|||||+
T Consensus       152 a~~~~---------------------------------------------------------~~~~~~~~GT~~Y~APEv  174 (322)
T d1s9ja_         152 SGQLI---------------------------------------------------------DSMANSFVGTRSYMSPER  174 (322)
T ss_dssp             CHHHH---------------------------------------------------------HHTC---CCSSCCCCHHH
T ss_pred             ccccC---------------------------------------------------------CCccccccCCccccCchH
Confidence            84211                                                         011124589999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CC--------------------------------
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---KP--------------------------------  362 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~---~~--------------------------------  362 (451)
                      +.+..|+.++|||||||++|||++|+.||.+.+..........   +.                                
T Consensus       175 l~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (322)
T d1s9ja_         175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL  254 (322)
T ss_dssp             HHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHH
T ss_pred             HcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHH
Confidence            9999999999999999999999999999987554322111000   00                                


Q ss_pred             ----CCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          363 ----LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       363 ----~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                          ...+........+.++++||.+||++||.+|||    ++|+|+||||++.++
T Consensus       255 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD----LKQLMVHAFIKRSDA  306 (322)
T ss_dssp             HHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHHHH
T ss_pred             hhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCHhhCcCCc
Confidence                000111122234458999999999999999999    999999999987544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-57  Score=430.08  Aligned_cols=252  Identities=24%  Similarity=0.410  Sum_probs=209.0

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe-
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA-  160 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~-  160 (451)
                      |++.++||+|+||+||+|.++.+++         .||+|++...... ....+.+.+|++++++++|||||++++++.+ 
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~---------~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   80 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTV---------EVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWEST   80 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCC---------EEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCe---------EEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeec
Confidence            5788899999999999999987765         4999999766432 3345678889999999999999999999875 


Q ss_pred             ---CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEc-cCCCEEEec
Q 013016          161 ---SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVLVR-SDGHIMLSD  234 (451)
Q Consensus       161 ---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivH~Dlkp~NIll~-~~~~~kl~D  234 (451)
                         ++.+|||||||+||+|.+++...  ..+++..++.++.||+.||+|||++|  |+||||||+|||++ .++.+||+|
T Consensus        81 ~~~~~~~~ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~D  158 (270)
T d1t4ha_          81 VKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD  158 (270)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred             cccCCEEEEEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEee
Confidence               45789999999999999999775  45999999999999999999999999  99999999999997 578999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|....                                                         .....+.+||+.|||
T Consensus       159 FGla~~~~---------------------------------------------------------~~~~~~~~GT~~Y~a  181 (270)
T d1t4ha_         159 LGLATLKR---------------------------------------------------------ASFAKAVIGTPEFMA  181 (270)
T ss_dssp             TTGGGGCC---------------------------------------------------------TTSBEESCSSCCCCC
T ss_pred             cCcceecc---------------------------------------------------------CCccCCcccCccccC
Confidence            99984211                                                         011224589999999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE-TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       315 PE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      ||++.+ .++.++|||||||++|||++|+.||...... .....+..+.....  . +...+.++.+||.+||++||++|
T Consensus       182 PE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~li~~~l~~dp~~R  257 (270)
T d1t4ha_         182 PEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--F-DKVAIPEVKEIIEGCIRQNKDER  257 (270)
T ss_dssp             GGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG--G-GGCCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcc--c-CccCCHHHHHHHHHHccCCHhHC
Confidence            999876 6999999999999999999999999875544 44555554432211  1 12233489999999999999999


Q ss_pred             CCCCCChHHHHcCCCcC
Q 013016          394 LGSKRGAADVKTHPFFK  410 (451)
Q Consensus       394 pt~~~~~~ell~hp~~~  410 (451)
                      ||    ++|||+||||+
T Consensus       258 ~s----~~ell~Hp~fk  270 (270)
T d1t4ha_         258 YS----IKDLLNHAFFQ  270 (270)
T ss_dssp             CC----HHHHHTSGGGC
T ss_pred             cC----HHHHhCCcccC
Confidence            99    99999999996

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.1e-57  Score=429.08  Aligned_cols=260  Identities=27%  Similarity=0.440  Sum_probs=224.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH------HHHHHHHHHHHHHHHHHCC-CCCcc
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE------KKKKVHRAEMEKKILKMLD-HPFLP  152 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~e~~~l~~l~-h~nIv  152 (451)
                      ++|++.+.||+|+||+||+|+++.+++         .||||++.+....      .....+.+.+|+.+++++. |||||
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~---------~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv   73 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCK---------EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII   73 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCC---------EEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence            789999999999999999999877655         5999999764321      2234456788999999997 99999


Q ss_pred             ceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEE
Q 013016          153 TLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML  232 (451)
Q Consensus       153 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  232 (451)
                      ++++++.+++++|||||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        74 ~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl  151 (277)
T d1phka_          74 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  151 (277)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             EEEeecccCcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEE
Confidence            9999999999999999999999999999765  56999999999999999999999999999999999999999999999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||++......                                                        ......+||+.|
T Consensus       152 ~DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~~y  175 (277)
T d1phka_         152 TDFGFSCQLDPG--------------------------------------------------------EKLREVCGTPSY  175 (277)
T ss_dssp             CCCTTCEECCTT--------------------------------------------------------CCBCCCCSCGGG
T ss_pred             ccchheeEccCC--------------------------------------------------------CceeeeeccCCC
Confidence            999998543210                                                        011234799999


Q ss_pred             cCcccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          313 VSPEVASG------GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       313 ~aPE~~~~------~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      +|||++.+      ..++.++||||+||++|+|++|+.||.+.+....+..+..+...++........+ ++++||++||
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L  254 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD-TVKDLVSRFL  254 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCH-HHHHHHHHHC
T ss_pred             CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCH-HHHHHHHHHc
Confidence            99999863      3468899999999999999999999999998888889988877665544444444 8999999999


Q ss_pred             ccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          387 NKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +.||.+||+    ++|||+||||++
T Consensus       255 ~~~p~~R~s----~~eil~h~~~~~  275 (277)
T d1phka_         255 VVQPQKRYT----AEEALAHPFFQQ  275 (277)
T ss_dssp             CSSGGGSCC----HHHHTTSGGGCT
T ss_pred             cCChhHCcC----HHHHHcCHHHHH
Confidence            999999999    999999999987

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-57  Score=438.51  Aligned_cols=259  Identities=24%  Similarity=0.397  Sum_probs=225.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      .+++|++.+.||+|+||+||+|.++.+++         .||||++++....    ...+.+|+++|+.++|||||+++++
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~---------~~AiK~i~~~~~~----~~~~~~Ei~il~~l~HpnIv~~~~~   69 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKK---------TYMAKFVKVKGTD----QVLVKKEISILNIARHRNILHLHES   69 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECCCTHH----HHHHHHHHHHHHHSCCTTBCCEEEE
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCc---------EEEEEEEcCCccc----HHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            35889999999999999999999987765         4999999865322    2346679999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC--CCEEEecc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD--GHIMLSDF  235 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~--~~~kl~Df  235 (451)
                      |++++++|||||||+||+|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++.+  +.+||+||
T Consensus        70 ~~~~~~~~lvmE~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DF  148 (321)
T d1tkia_          70 FESMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF  148 (321)
T ss_dssp             EEETTEEEEEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EEECCEEEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEccc
Confidence            99999999999999999999998765 2469999999999999999999999999999999999999854  48999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                        .......+||+.|+||
T Consensus       149 G~~~~~~~--------------------------------------------------------~~~~~~~~~t~~y~ap  172 (321)
T d1tkia_         149 GQARQLKP--------------------------------------------------------GDNFRLLFTAPEYYAP  172 (321)
T ss_dssp             TTCEECCT--------------------------------------------------------TCEEEEEESCGGGSCH
T ss_pred             chhhcccc--------------------------------------------------------CCcccccccccccccc
Confidence            99853211                                                        0111234789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |.+.+..|+.++|||||||++|+|++|+.||...+..+.+.++.+....++...++.+.+ ++++||.+||+.||.+|||
T Consensus       173 e~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dp~~R~s  251 (321)
T d1tkia_         173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI-EAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             HHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCH-HHHHHHHTTSCSSGGGSCC
T ss_pred             hhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCH-HHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999999999887766544444434 8999999999999999999


Q ss_pred             CCCChHHHHcCCCcCC
Q 013016          396 SKRGAADVKTHPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~hp~~~~  411 (451)
                          +.|+|+||||++
T Consensus       252 ----~~eil~hp~~~~  263 (321)
T d1tkia_         252 ----ASEALQHPWLKQ  263 (321)
T ss_dssp             ----HHHHHHSHHHHS
T ss_pred             ----HHHHhcCHhhcc
Confidence                999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-56  Score=425.58  Aligned_cols=265  Identities=27%  Similarity=0.374  Sum_probs=214.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|.++.+++         .||||++..... .......+.+|+.++++++|||||++++++.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~   71 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGE---------VVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIH   71 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCC---------EEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEEeccccc
Confidence            689999999999999999999987665         499999976532 2334567788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +++++|+||||+ ++.+.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+
T Consensus        72 ~~~~~~iv~e~~-~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~  150 (298)
T d1gz8a_          72 TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR  150 (298)
T ss_dssp             ETTEEEEEEECC-SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHH
T ss_pred             cccceeEEEeec-CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcce
Confidence            999999999999 4566666666556779999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........||+.|+|||++.
T Consensus       151 ~~~~~-------------------------------------------------------~~~~~~~~gt~~y~apE~~~  175 (298)
T d1gz8a_         151 AFGVP-------------------------------------------------------VRTYTHEVVTLWYRAPEILL  175 (298)
T ss_dssp             HHCCC-------------------------------------------------------SBCTTCCBCCCTTCCHHHHT
T ss_pred             eccCC-------------------------------------------------------cccceeecccceeeehhhhc
Confidence            32211                                                       11122347999999999987


Q ss_pred             CCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCC------------------------CcC
Q 013016          320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPS------------------------SMS  374 (451)
Q Consensus       320 ~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~~  374 (451)
                      ... ++.++|||||||++|+|++|+.||.+.+..+.+.++.............                        ...
T Consensus       176 ~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (298)
T d1gz8a_         176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL  255 (298)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTC
T ss_pred             cccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCC
Confidence            766 4889999999999999999999999888777776665421111111000                        112


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +.++++||++||.+||++|||    ++|||+||||++++.
T Consensus       256 s~~~~dll~~mL~~dP~~R~t----~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         256 DEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQDVTK  291 (298)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGTTCCC
T ss_pred             CHHHHHHHHHHccCChhHCcC----HHHHhCCHhhccCCC
Confidence            347899999999999999999    999999999998744

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-56  Score=428.01  Aligned_cols=262  Identities=26%  Similarity=0.320  Sum_probs=209.3

Q ss_pred             EEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH--HHHHHHHHHHHHHHHHCCCCCccceeEEEEeC
Q 013016           84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK--KKKVHRAEMEKKILKMLDHPFLPTLYAEFEAS  161 (451)
Q Consensus        84 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~~  161 (451)
                      .+++||+|+||+||+|+++.+++         .||||+++......  ......+.+|+.++++++|||||++++++..+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~   72 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQ---------IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   72 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCS---------EEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cceEeccCcCeEEEEEEECCCCc---------EEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC
Confidence            46789999999999999887665         49999997654322  12245678899999999999999999999999


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +++|||||||.|+++..+...  ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        73 ~~~~ivmE~~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~  150 (299)
T d1ua2a_          73 SNISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF  150 (299)
T ss_dssp             TCCEEEEECCSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             CceeehhhhhcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCcccccc
Confidence            999999999988877665543  356999999999999999999999999999999999999999999999999998532


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      ...                                                       .......+||+.|||||++.+.
T Consensus       151 ~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~  175 (299)
T d1ua2a_         151 GSP-------------------------------------------------------NRAYTHQVVTRWYRAPELLFGA  175 (299)
T ss_dssp             TSC-------------------------------------------------------CCCCCCSCCCCTTCCHHHHTTC
T ss_pred             CCC-------------------------------------------------------cccccceecChhhccHHHHccC
Confidence            211                                                       0111234799999999998764


Q ss_pred             -CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCC-----------------------CCcChHH
Q 013016          322 -SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-----------------------SSMSEYH  377 (451)
Q Consensus       322 -~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~-----------------------~~~~~~~  377 (451)
                       .|+.++|||||||++|||++|..||.+.+..+.+.++...........+                       ....+.+
T Consensus       176 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  255 (299)
T d1ua2a_         176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD  255 (299)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred             CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHH
Confidence             5799999999999999999999999998888887777642111111000                       0112348


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                      +++||.+||+.||++|||    +.|+|+||||++.+.+
T Consensus       256 ~~dll~~~L~~dP~~R~s----a~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         256 LLDLIQGLFLFNPCARIT----ATQALKMKYFSNRPGP  289 (299)
T ss_dssp             HHHHHHHHHCSSTTTSCC----HHHHHTSGGGTSSSCC
T ss_pred             HHHHHHHHccCChhhCcC----HHHHhCCHhhCCCCCC
Confidence            999999999999999999    9999999999986554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-56  Score=435.87  Aligned_cols=256  Identities=24%  Similarity=0.375  Sum_probs=207.3

Q ss_pred             ccCCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHH-CCCCCcccee
Q 013016           78 TFRDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKM-LDHPFLPTLY  155 (451)
Q Consensus        78 ~~~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~nIv~l~  155 (451)
                      ..++|.+.. .||+|+||+||+|+++.+++         .||||++.+.        ..+.+|+.++.+ ++|||||+++
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~---------~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~   71 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQE---------KFALKMLQDC--------PKARREVELHWRASQCPHIVRIV   71 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCC---------EEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCC---------EEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEE
Confidence            347899876 59999999999999987765         4999999743        234568888655 5899999999


Q ss_pred             EEEEe----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CC
Q 013016          156 AEFEA----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DG  228 (451)
Q Consensus       156 ~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~  228 (451)
                      ++|++    ++++|||||||+||+|.+++.......+++..++.|+.||+.||+|||++||+||||||+|||++.   ++
T Consensus        72 ~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~  151 (335)
T d2ozaa1          72 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  151 (335)
T ss_dssp             EEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTC
T ss_pred             EEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccc
Confidence            99976    468999999999999999998765667999999999999999999999999999999999999985   46


Q ss_pred             CEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccccccccc
Q 013016          229 HIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG  308 (451)
Q Consensus       229 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  308 (451)
                      .+||+|||+|+.....                                                        ......+|
T Consensus       152 ~~Kl~DFG~a~~~~~~--------------------------------------------------------~~~~~~~g  175 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSH--------------------------------------------------------NSLTTPCY  175 (335)
T ss_dssp             CEEECCCTTCEECCCC--------------------------------------------------------CCCCCCSC
T ss_pred             cccccccceeeeccCC--------------------------------------------------------CccccccC
Confidence            7999999998533211                                                        11123479


Q ss_pred             CCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh----cCCCCCCCCCCCCcChHHHHHHHHH
Q 013016          309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV----KKPLTFPTQSPSSMSEYHARDLISG  384 (451)
Q Consensus       309 t~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~ll~~  384 (451)
                      |+.|||||++.+..|+.++|||||||++|+|+||+.||.+.+.......+.    .....++...... .+.++.+||++
T Consensus       176 t~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~  254 (335)
T d2ozaa1         176 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE-VSEEVKMLIRN  254 (335)
T ss_dssp             CCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHH-SCHHHHHHHHH
T ss_pred             CcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCccccc-CCHHHHHHHHH
Confidence            999999999999999999999999999999999999998766554443333    3333333322222 33489999999


Q ss_pred             hcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          385 LLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       385 ~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      ||++||++|||    +.|+|+||||++
T Consensus       255 ~L~~dP~~R~s----~~eil~hp~~~~  277 (335)
T d2ozaa1         255 LLKTEPTQRMT----ITEFMNHPWIMQ  277 (335)
T ss_dssp             HSCSSTTTSCC----HHHHHHSHHHHT
T ss_pred             HccCChhHCcC----HHHHHcCHHhhC
Confidence            99999999999    999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.8e-55  Score=419.58  Aligned_cols=279  Identities=20%  Similarity=0.264  Sum_probs=215.7

Q ss_pred             hhhhhhhhhccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHH
Q 013016           61 FAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEK  140 (451)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~  140 (451)
                      +++.++..++......+..++|++.++||+|+||+||+|.++.+++.      ...||||.+....  .....+.+.+|+
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~------~~~vavK~~~~~~--~~~~~~~~~~E~   78 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKR------EIFVAIKTLKSGY--TEKQRRDFLSEA   78 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---C------CEEEEEEECCSSC--CHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCE------EEEEEEEEECccc--CHHHHHHHHHHH
Confidence            45555566654444455668899999999999999999998755421      2358999986542  233446788899


Q ss_pred             HHHHHCCCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 013016          141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPE  220 (451)
Q Consensus       141 ~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~  220 (451)
                      .+|++++|||||++++++..++.+|+|||||+||+|.+++... .+.+++..+..++.||+.||+|||++||+||||||+
T Consensus        79 ~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~  157 (299)
T d1jpaa_          79 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAAR  157 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             HHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccc
Confidence            9999999999999999999999999999999999999988764 345999999999999999999999999999999999


Q ss_pred             cEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccc
Q 013016          221 NVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVA  300 (451)
Q Consensus       221 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (451)
                      ||||+.++.+||+|||+++.........                                                  ..
T Consensus       158 NILl~~~~~~Kl~DFGla~~~~~~~~~~--------------------------------------------------~~  187 (299)
T d1jpaa_         158 NILVNSNLVCKVSDFGLSRFLEDDTSDP--------------------------------------------------TY  187 (299)
T ss_dssp             GEEECTTCCEEECCC-----------------------------------------------------------------
T ss_pred             eEEECCCCcEEECCcccceEccCCCCcc--------------------------------------------------ee
Confidence            9999999999999999986432110000                                                  00


Q ss_pred             ccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHH
Q 013016          301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR  379 (451)
Q Consensus       301 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  379 (451)
                      .......||+.|||||++.+..++.++|||||||+||||+| |+.||.+....+.+..+..+.....    +...+.++.
T Consensus       188 ~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~  263 (299)
T d1jpaa_         188 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP----PMDCPSALH  263 (299)
T ss_dssp             --------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC----CTTCCHHHH
T ss_pred             eecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CccchHHHH
Confidence            11112368899999999999999999999999999999998 8999999888888888776543221    112344899


Q ss_pred             HHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          380 DLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       380 ~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +|+.+||+.||++|||    +.||+++
T Consensus       264 ~li~~cl~~~P~~RPs----~~ei~~~  286 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPK----FGQIVNT  286 (299)
T ss_dssp             HHHHHHTCSSTTTSCC----HHHHHHH
T ss_pred             HHHHHHcCCCHhHCcC----HHHHHHH
Confidence            9999999999999999    8888763

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-55  Score=425.68  Aligned_cols=272  Identities=16%  Similarity=0.264  Sum_probs=218.1

Q ss_pred             hccCCCCCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-C
Q 013016           69 ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-D  147 (451)
Q Consensus        69 ~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~  147 (451)
                      ..+..++.+..++|++.++||+|+||+||+|+++...+.    .....||+|++....  .......+.+|+.++.++ +
T Consensus        26 ~~~~~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~   99 (325)
T d1rjba_          26 YEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKT----GVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGS   99 (325)
T ss_dssp             SCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSS----SCEEEEEEEEECC--------CHHHHHHHHHHHHHCC
T ss_pred             cCCCccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcc----cceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcC
Confidence            333444555668899999999999999999998765432    122359999987553  233445677899999988 8


Q ss_pred             CCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCC---------------------CCCCHHHHHHHHHHHHHHHHH
Q 013016          148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH---------------------KRFSLTSARFYAAEVLVALEY  206 (451)
Q Consensus       148 h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~~  206 (451)
                      |||||++++++.+.+.+|||||||+||+|.+++.....                     ..+++..++.|+.||+.||+|
T Consensus       100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  179 (325)
T d1rjba_         100 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF  179 (325)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999976532                     358999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCcccc
Q 013016          207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQ  286 (451)
Q Consensus       207 LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (451)
                      ||++|||||||||+|||++.++.+||+|||+|+.....                                          
T Consensus       180 LH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~------------------------------------------  217 (325)
T d1rjba_         180 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD------------------------------------------  217 (325)
T ss_dssp             HHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGC------------------------------------------
T ss_pred             HHhCCeeeccCchhccccccCCeEEEeeccccccccCC------------------------------------------
Confidence            99999999999999999999999999999998532211                                          


Q ss_pred             ccCCCcccccccccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCC
Q 013016          287 TLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTF  365 (451)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~  365 (451)
                                 .......+..||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+....+.+++.....+
T Consensus       218 -----------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~  286 (325)
T d1rjba_         218 -----------SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM  286 (325)
T ss_dssp             -----------TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC
T ss_pred             -----------CceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC
Confidence                       01111223478999999999999999999999999999999998 899999877777777776654433


Q ss_pred             CCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       366 ~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.   +...+.++.+||.+||+.||++|||    ++||++|
T Consensus       287 ~~---p~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~~  320 (325)
T d1rjba_         287 DQ---PFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF  320 (325)
T ss_dssp             CC---CTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             CC---CCcCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            22   1223448999999999999999999    9999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-55  Score=415.64  Aligned_cols=258  Identities=22%  Similarity=0.317  Sum_probs=206.0

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|.+.++||+|+||+||+|+++..            ||||+++.... .....+.+.+|+.++++++|||||++++
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~------------vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~~   71 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWHGD------------VAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMG   71 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESSSE------------EEEEECCCSSC-CTTHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEECCE------------EEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeeeE
Confidence            4457899999999999999999986542            99999975432 2344567888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++. .+.++||||||+||+|.+++.... ..+++..+..|+.||+.||+|||++|||||||||+|||++.++.+||+|||
T Consensus        72 ~~~-~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFG  149 (276)
T d1uwha_          72 YST-APQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG  149 (276)
T ss_dssp             EEC-SSSCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCC
T ss_pred             EEe-ccEEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccc
Confidence            875 456899999999999999997653 459999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|......                                                     .......+..||+.|||||
T Consensus       150 la~~~~~~-----------------------------------------------------~~~~~~~~~~gt~~y~APE  176 (276)
T d1uwha_         150 LATVKSRW-----------------------------------------------------SGSHQFEQLSGSILWMAPE  176 (276)
T ss_dssp             CSCC-----------------------------------------------------------------CCCCGGGCCHH
T ss_pred             ceeecccc-----------------------------------------------------CCcccccccccCcccCCHH
Confidence            98532210                                                     0111122457999999999


Q ss_pred             cccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-CCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          317 VASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       317 ~~~~---~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      ++.+   ..|+.++|||||||+||||+||+.||.+......+..+.. +.........+...+.++.+|+.+||+.||.+
T Consensus       177 ~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~  256 (276)
T d1uwha_         177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE  256 (276)
T ss_dssp             HHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhH
Confidence            9865   3479999999999999999999999998776655544443 33222212222334458999999999999999


Q ss_pred             cCCCCCChHHHHcC
Q 013016          393 RLGSKRGAADVKTH  406 (451)
Q Consensus       393 Rpt~~~~~~ell~h  406 (451)
                      |||    +.||+++
T Consensus       257 RPt----~~~il~~  266 (276)
T d1uwha_         257 RPL----FPQILAS  266 (276)
T ss_dssp             SCC----HHHHHHH
T ss_pred             CcC----HHHHHHH
Confidence            999    9999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-55  Score=419.15  Aligned_cols=265  Identities=25%  Similarity=0.324  Sum_probs=210.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC---CCCCccceeE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML---DHPFLPTLYA  156 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~nIv~l~~  156 (451)
                      ++|+++++||+|+||+||+|++..+..        ..||||++...... ......+.+|+.+++.+   +||||+++++
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~--------~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~   77 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGG--------RFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFD   77 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTT--------EEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCC--------EEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeee
Confidence            789999999999999999999865432        25999999754322 12223344577776655   8999999999


Q ss_pred             EEEe-----CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEE
Q 013016          157 EFEA-----SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM  231 (451)
Q Consensus       157 ~~~~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~k  231 (451)
                      +|..     ..+++++|||+.++.+.. ........+++..++.++.||+.||+|||++|||||||||+|||++.++.+|
T Consensus        78 ~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~k  156 (305)
T d1blxa_          78 VCTVSRTDRETKLTLVFEHVDQDLTTY-LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  156 (305)
T ss_dssp             EEEEEECSSEEEEEEEEECCSCBHHHH-HHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             eecccccccCceEEEEEEeccCCchhh-hhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCee
Confidence            9853     358899999997776654 3444456799999999999999999999999999999999999999999999


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++.....                                                        .......+||+.
T Consensus       157 l~dfg~~~~~~~--------------------------------------------------------~~~~~~~~gT~~  180 (305)
T d1blxa_         157 LADFGLARIYSF--------------------------------------------------------QMALTSVVVTLW  180 (305)
T ss_dssp             ECSCCSCCCCCG--------------------------------------------------------GGGGCCCCCCCT
T ss_pred             ecchhhhhhhcc--------------------------------------------------------cccCCCcccChh
Confidence            999999743210                                                        011123589999


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCC----------------------CCC
Q 013016          312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP----------------------TQS  369 (451)
Q Consensus       312 y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------------------~~~  369 (451)
                      |||||++.+..|+.++|||||||++|||++|+.||.+.+..+.+..+........                      ...
T Consensus       181 Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
T d1blxa_         181 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  260 (305)
T ss_dssp             TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             hcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhh
Confidence            9999999999999999999999999999999999999888887777654211100                      000


Q ss_pred             CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       370 ~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      .....+..+++||.+||++||++|||    +.|+|+||||++++.
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~s----a~e~L~Hpff~~i~~  301 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYFQDLER  301 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTCCC
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcC----HHHHhcChhhcCchh
Confidence            11123448999999999999999999    999999999999764

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.6e-55  Score=415.81  Aligned_cols=262  Identities=25%  Similarity=0.388  Sum_probs=213.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.+.||+|+||+||+|.+..+++         .||||++.+...........+.+|+.+++.++|||||++++++.
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~---------~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~   77 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHR---------DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE   77 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCC---------EEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceee
Confidence            679999999999999999999887765         49999998765555566677889999999999999999999997


Q ss_pred             eCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          160 ASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       160 ~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ..+    .+|||||||+|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus        78 ~~~~~~~~~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~  155 (277)
T d1o6ya_          78 AETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF  155 (277)
T ss_dssp             EECSSSEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCC
T ss_pred             eccCCCceEEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehh
Confidence            654    489999999999999988765  56999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |.+.......                                                    .........+||+.||||
T Consensus       156 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~Gt~~Y~aP  183 (277)
T d1o6ya_         156 GIARAIADSG----------------------------------------------------NSVTQTAAVIGTAQYLSP  183 (277)
T ss_dssp             TTCEECC--------------------------------------------------------------------TTCCH
T ss_pred             hhhhhhcccc----------------------------------------------------ccccccccccCcccccCH
Confidence            9874322110                                                    011122345899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      |++.+..++.++|||||||++|+|+||+.||.+.+..+.+.++.......+....+.+.+ ++.+||.+||++||.+||+
T Consensus       184 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~l~~li~~~L~~dp~~R~~  262 (277)
T d1o6ya_         184 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRYQ  262 (277)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCH-HHHHHHHHHTCSSGGGSCS
T ss_pred             HHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCH-HHHHHHHHHccCCHhHCHh
Confidence            999999999999999999999999999999999988888888888766555444444444 8999999999999999994


Q ss_pred             CCCChHHHHcCCCc
Q 013016          396 SKRGAADVKTHPFF  409 (451)
Q Consensus       396 ~~~~~~ell~hp~~  409 (451)
                      .   ++++ .|+|.
T Consensus       263 s---a~~l-~~~l~  272 (277)
T d1o6ya_         263 T---AAEM-RADLV  272 (277)
T ss_dssp             S---HHHH-HHHHH
T ss_pred             H---HHHH-HHHHH
Confidence            1   5554 45554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-55  Score=426.94  Aligned_cols=288  Identities=35%  Similarity=0.670  Sum_probs=230.3

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH-HHHHHHHHHHHHHHHHHCCC-CCccce
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE-KKKKVHRAEMEKKILKMLDH-PFLPTL  154 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~nIv~l  154 (451)
                      ..+++|++.++||+|+||+||+|.+....      ..++.||||++.+.... .....+.+.+|++++++++| |||+++
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~   94 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISGH------DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL   94 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSST------TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECccC------CCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEe
Confidence            34588999999999999999999875432      12346999999754321 12234556679999999966 899999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ++++.+...+++||||+.||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|
T Consensus        95 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~D  172 (322)
T d1vzoa_          95 HYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD  172 (322)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESC
T ss_pred             eeeeccCCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEee
Confidence            99999999999999999999999998776  4588999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+++.....                                                      ......+..|++.|+|
T Consensus       173 FG~a~~~~~~------------------------------------------------------~~~~~~~~~g~~~~~~  198 (322)
T d1vzoa_         173 FGLSKEFVAD------------------------------------------------------ETERAYDFCGTIEYMA  198 (322)
T ss_dssp             SSEEEECCGG------------------------------------------------------GGGGGCGGGSCCTTCC
T ss_pred             ccchhhhccc------------------------------------------------------ccccccccccccccch
Confidence            9998532210                                                      1111223479999999


Q ss_pred             cccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----hcCCCCCCCCCCCCcChHHHHHHHHHhccc
Q 013016          315 PEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI----VKKPLTFPTQSPSSMSEYHARDLISGLLNK  388 (451)
Q Consensus       315 PE~~~~~~--~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  388 (451)
                      ||.+.+..  ++.++|||||||+||+|++|+.||.+.+.......+    ......++..     .+.++.+||.+||++
T Consensus       199 pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~-----~s~~~~~li~~~l~~  273 (322)
T d1vzoa_         199 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE-----MSALAKDLIQRLLMK  273 (322)
T ss_dssp             HHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT-----SCHHHHHHHHHHTCS
T ss_pred             hHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCccc-----CCHHHHHHHHHHccc
Confidence            99998754  688999999999999999999999876554433333    3333333332     334899999999999


Q ss_pred             CcCCcCCCCC-ChHHHHcCCCcCCCCccc--ccccCCCCCCCCCCC
Q 013016          389 DPCNRLGSKR-GAADVKTHPFFKGLNFAL--IRSLTPPEIPGMRRQ  431 (451)
Q Consensus       389 dP~~Rpt~~~-~~~ell~hp~~~~~~~~~--~~~~~~~~~p~~~~~  431 (451)
                      ||.+||+... .++|+|+||||++++|..  .+...+|.+|+++..
T Consensus       274 dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~  319 (322)
T d1vzoa_         274 DPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDE  319 (322)
T ss_dssp             SGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-
T ss_pred             CHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCC
Confidence            9999996432 389999999999999864  478888999998865

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-54  Score=413.46  Aligned_cols=254  Identities=20%  Similarity=0.275  Sum_probs=209.7

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||+||+|.++.+++         .||||+++...    ...+.+.+|+.++++++|||||++++
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~---------~vAvK~i~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~   80 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLG   80 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTE---------EEEEEECCTTC----SCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCe---------EEEEEEECCcc----chHHHHHHHHHHHHhCCCCCEecCCc
Confidence            344789999999999999999999987765         49999997542    23356778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      +|.+++.++||||||++|+|.+++.......+++..+..|+.||+.||+|||++||+||||||+||||+.++.+||+|||
T Consensus        81 ~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG  160 (287)
T d1opja_          81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG  160 (287)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             cEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEcccc
Confidence            99999999999999999999999988777789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|+.....                                                      .........|++.|||||
T Consensus       161 ~a~~~~~~------------------------------------------------------~~~~~~~~~g~~~y~aPE  186 (287)
T d1opja_         161 LSRLMTGD------------------------------------------------------TYTAHAGAKFPIKWTAPE  186 (287)
T ss_dssp             CTTTCCSS------------------------------------------------------SSEEETTEEECGGGCCHH
T ss_pred             ceeecCCC------------------------------------------------------CceeeccccccccccChH
Confidence            98532210                                                      011111236888999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..|+.++|||||||++|||++|..||.. .+.......+..+ ..++.  + ...+.++.+||.+||+.||++|||
T Consensus       187 ~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~~~~--~-~~~~~~l~~li~~cl~~dP~~Rps  262 (287)
T d1opja_         187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMER--P-EGCPEKVYELMRACWQWNPSDRPS  262 (287)
T ss_dssp             HHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCC--C-TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CCCCC--C-ccchHHHHHHHHHHcCCCHhHCcC
Confidence            99999999999999999999999997666554 4444444444433 22211  1 223448999999999999999999


Q ss_pred             CCCChHHHHc
Q 013016          396 SKRGAADVKT  405 (451)
Q Consensus       396 ~~~~~~ell~  405 (451)
                          +.||++
T Consensus       263 ----~~ei~~  268 (287)
T d1opja_         263 ----FAEIHQ  268 (287)
T ss_dssp             ----HHHHHH
T ss_pred             ----HHHHHH
Confidence                999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-55  Score=415.34  Aligned_cols=252  Identities=24%  Similarity=0.381  Sum_probs=208.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHH---HHHHHHHHHHHHHHCC--CCCccce
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKK---KVHRAEMEKKILKMLD--HPFLPTL  154 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~e~~~l~~l~--h~nIv~l  154 (451)
                      ++|++.++||+|+||+||+|+++.+++         .||||++.+.......   ...++.+|+.++++++  |||||++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~---------~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~   74 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNL---------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL   74 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCC---------EEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEE
Confidence            679999999999999999999987765         4999999865432211   1223456999999986  8999999


Q ss_pred             eEEEEeCCeEEEEEeeccC-CchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC-CCEEE
Q 013016          155 YAEFEASNFSCIVMEFCSG-GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIML  232 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~-~~~kl  232 (451)
                      ++++.+.+..|+||||+.+ +++.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl  152 (273)
T d1xwsa_          75 LDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL  152 (273)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             EEEEeeCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEE
Confidence            9999999999999999976 5777777664  569999999999999999999999999999999999999855 79999


Q ss_pred             eccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCc
Q 013016          233 SDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY  312 (451)
Q Consensus       233 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  312 (451)
                      +|||+|.....                                                         ....+++||+.|
T Consensus       153 ~DFG~a~~~~~---------------------------------------------------------~~~~~~~GT~~y  175 (273)
T d1xwsa_         153 IDFGSGALLKD---------------------------------------------------------TVYTDFDGTRVY  175 (273)
T ss_dssp             CCCTTCEECCS---------------------------------------------------------SCBCCCCSCGGG
T ss_pred             Cccccceeccc---------------------------------------------------------ccccccccCCCc
Confidence            99999853211                                                         111235799999


Q ss_pred             cCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcC
Q 013016          313 VSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPC  391 (451)
Q Consensus       313 ~aPE~~~~~~~-~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  391 (451)
                      ||||++.+..+ +.++|||||||++|+|++|+.||...      ..+..+...++..     .+.++++||.+||+.||+
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~~~-----~s~~~~~li~~~L~~dp~  244 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-----VSSECQHLIRWCLALRPS  244 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCSSC-----CCHHHHHHHHHHTCSSGG
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCCCC-----CCHHHHHHHHHHccCCHh
Confidence            99999987665 67899999999999999999999752      2344555444432     334899999999999999


Q ss_pred             CcCCCCCChHHHHcCCCcCCCCc
Q 013016          392 NRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       392 ~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                      +|||    ++|+|+||||+++-.
T Consensus       245 ~R~s----~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         245 DRPT----FEEIQNHPWMQDVLL  263 (273)
T ss_dssp             GSCC----HHHHHTSGGGSSCCC
T ss_pred             HCcC----HHHHhcCHhhCCCCC
Confidence            9999    999999999998643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-54  Score=407.16  Aligned_cols=251  Identities=23%  Similarity=0.324  Sum_probs=205.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.++++.          .||||+++....    ..+.+.+|++++++++|||||++++++
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~----------~vAvK~i~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~   69 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVC   69 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTE----------EEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCC----------EEEEEEECCCcC----cHHHHHHHHHHHHhcCCCCccccccee
Confidence            368999999999999999999987543          399999975432    234677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      ..++.+|+|||||++|+|.+++.... ..+++..+..|+.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        70 ~~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla  148 (263)
T d1sm2a_          70 LEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT  148 (263)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC--
T ss_pred             ccCCceEEEEEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchh
Confidence            99999999999999999999887653 55899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      +.....                                                      .........||+.|||||++
T Consensus       149 ~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE~l  174 (263)
T d1sm2a_         149 RFVLDD------------------------------------------------------QYTSSTGTKFPVKWASPEVF  174 (263)
T ss_dssp             ----------------------------------------------------------------------CTTSCCHHHH
T ss_pred             eeccCC------------------------------------------------------CceeecceecCcccCChHHh
Confidence            533211                                                      00111124789999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..|+.++|||||||++|||+| |.+||...+..+.+..+..+.....    +...+.++.+|+.+||+.||++|||  
T Consensus       175 ~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~~p~~Rps--  248 (263)
T d1sm2a_         175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----PRLASTHVYQIMNHCWKERPEDRPA--  248 (263)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC----ccccCHHHHHHHHHHccCCHhHCcC--
Confidence            99999999999999999999999 6777777777778877777543221    2233458999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        ++||++|
T Consensus       249 --~~~il~~  255 (263)
T d1sm2a_         249 --FSRLLRQ  255 (263)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHHH
Confidence              9999976

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-55  Score=412.96  Aligned_cols=259  Identities=20%  Similarity=0.301  Sum_probs=212.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|++.++||+|+||+||+|.++.+.          .||||++.....    ..+.+.+|+.++++++|||||+++
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~----------~vAvK~~~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~   74 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----------KVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY   74 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTE----------EEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ecCHHHeEEeEEEecCCCcEEEEEEECCCC----------EEEEEEEccCcC----CHHHHHHHHHHHHhCCCCCEeEEE
Confidence            344578999999999999999999987543          399999975432    234678899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      +++.+ +.+|+|||||++|+|.+++.......+++..+..|+.||+.||.|||++||+||||||+||||+.++.+||+||
T Consensus        75 g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DF  153 (272)
T d1qpca_          75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF  153 (272)
T ss_dssp             EEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             eeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccc
Confidence            98754 56799999999999999876655556999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|+.....                                                      .........||+.||||
T Consensus       154 Gla~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~AP  179 (272)
T d1qpca_         154 GLARLIEDN------------------------------------------------------EYTAREGAKFPIKWTAP  179 (272)
T ss_dssp             TTCEECSSS------------------------------------------------------CEECCTTCCCCTTTSCH
T ss_pred             cceEEccCC------------------------------------------------------ccccccccCCcccccCh
Confidence            998543211                                                      01111234789999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      |++.++.++.++|||||||++|||+|| .+||......+.+..+..+.....    +...+.++.+|+.+||+.||++||
T Consensus       180 E~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR----PDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             HHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC----cccChHHHHHHHHHHcCCCHhHCc
Confidence            999988999999999999999999994 566666777777777766532221    122344899999999999999999


Q ss_pred             CCCCChHHHHc--CCCcCC
Q 013016          395 GSKRGAADVKT--HPFFKG  411 (451)
Q Consensus       395 t~~~~~~ell~--hp~~~~  411 (451)
                      |    ++||++  |+||..
T Consensus       256 t----~~ei~~~L~~~fts  270 (272)
T d1qpca_         256 T----FDYLRSVLEDFFTA  270 (272)
T ss_dssp             C----HHHHHHHHHHHHHH
T ss_pred             C----HHHHHHHhhhhhhc
Confidence            9    999987  777753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.6e-54  Score=411.80  Aligned_cols=260  Identities=24%  Similarity=0.338  Sum_probs=210.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|+++.+.          .||||++..... .....+.+.+|+.+|++++|||||++++++.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~----------~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~   70 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGE----------TFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIH   70 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSC----------EEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCC----------EEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEeeeeecc
Confidence            68999999999999999999986432          499999976532 2334567788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .++..|+|||++.++.+..+....  +.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||.+.
T Consensus        71 ~~~~~~i~~e~~~~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~  148 (286)
T d1ob3a_          71 TKKRLVLVFEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR  148 (286)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             cCCceeEEEEeehhhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccce
Confidence            999999999999776666555443  669999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .....                                                       ........|++.|+|||.+.
T Consensus       149 ~~~~~-------------------------------------------------------~~~~~~~~~~~~y~~pE~~~  173 (286)
T d1ob3a_         149 AFGIP-------------------------------------------------------VRKYTHEIVTLWYRAPDVLM  173 (286)
T ss_dssp             HHCC----------------------------------------------------------------CCCTTCCHHHHT
T ss_pred             ecccC-------------------------------------------------------ccccceecccchhhhHHHHh
Confidence            32211                                                       11112346899999999997


Q ss_pred             CC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCC------------------------CCCcC
Q 013016          320 GG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS------------------------PSSMS  374 (451)
Q Consensus       320 ~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~  374 (451)
                      +. .++.++|||||||++|||++|+.||.+.+..+.+.++...........                        .....
T Consensus       174 ~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T d1ob3a_         174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (286)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccC
Confidence            65 469999999999999999999999998888777776653211111000                        01122


Q ss_pred             hHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCC
Q 013016          375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG  411 (451)
Q Consensus       375 ~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~  411 (451)
                      +.++.+||++||++||++|||    +.|+|+||||++
T Consensus       254 s~~~~dli~~~L~~dP~~R~s----~~ell~Hp~f~~  286 (286)
T d1ob3a_         254 DESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE  286 (286)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred             CHHHHHHHHHHccCChhHCcC----HHHHhcCcccCc
Confidence            348899999999999999999    999999999985

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-54  Score=409.57  Aligned_cols=261  Identities=20%  Similarity=0.280  Sum_probs=212.0

Q ss_pred             ccCCceEEe-eeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           78 TFRDFDLHR-RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~-~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      ..++|.+.+ +||+|+||+||+|.++...+       +..||||++....  .....+.+.+|+.+|++++|||||++++
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~-------~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g   76 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKK-------QIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIG   76 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---C-------CEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCC-------cEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEee
Confidence            336788888 49999999999998765432       2359999997542  2344567888999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++.. +.+|||||||+||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        77 ~~~~-~~~~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFG  154 (285)
T d1u59a_          77 VCQA-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG  154 (285)
T ss_dssp             EEES-SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             eecc-CeEEEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccch
Confidence            9875 4689999999999999987654 3469999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +|........                                                    .........||+.|||||
T Consensus       155 la~~~~~~~~----------------------------------------------------~~~~~~~~~gt~~y~aPE  182 (285)
T d1u59a_         155 LSKALGADDS----------------------------------------------------YYTARSAGKWPLKWYAPE  182 (285)
T ss_dssp             TCEECTTCSC----------------------------------------------------EECCCCSSCCCGGGCCHH
T ss_pred             hhhccccccc----------------------------------------------------ccccccccccCccccChH
Confidence            9864321110                                                    011112346899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRL  394 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rp  394 (451)
                      ++.+..++.++|||||||++|||+| |+.||.+.+..+.+..+..+.. ..|.     ..+.++.+||.+||+.||++||
T Consensus       183 ~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~-----~~~~~l~~li~~cl~~~p~~RP  257 (285)
T d1u59a_         183 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP-----ECPPELYALMSDCWIYKWEDRP  257 (285)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT-----TCCHHHHHHHHHTTCSSGGGSC
T ss_pred             HHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC-----cCCHHHHHHHHHHcCCCHhHCc
Confidence            9998899999999999999999998 9999999888888888877643 2222     2344899999999999999999


Q ss_pred             CCCCChHHH---HcCCCcC
Q 013016          395 GSKRGAADV---KTHPFFK  410 (451)
Q Consensus       395 t~~~~~~el---l~hp~~~  410 (451)
                      |    +.+|   |+|+|+.
T Consensus       258 s----~~~i~~~L~~~~~~  272 (285)
T d1u59a_         258 D----FLTVEQRMRACYYS  272 (285)
T ss_dssp             C----HHHHHHHHHHHHHH
T ss_pred             C----HHHHHHHHHHHHHH
Confidence            9    7776   6777763

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-54  Score=406.85  Aligned_cols=258  Identities=21%  Similarity=0.276  Sum_probs=207.0

Q ss_pred             ceEE-eeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe
Q 013016           82 FDLH-RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA  160 (451)
Q Consensus        82 y~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~  160 (451)
                      +.+. ++||+|+||+||+|.++...       .+..||||++..... .....+.+.+|+.+|++++|||||++++++..
T Consensus         8 ~~le~k~iG~G~fG~Vy~~~~~~~~-------~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~   79 (277)
T d1xbba_           8 LTLEDKELGSGNFGTVKKGYYQMKK-------VVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA   79 (277)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSS-------SEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES
T ss_pred             CeecCCCcccCCCeEEEEEEEccCC-------cCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhCCCCCCceEEEEecc
Confidence            4443 46999999999999876432       123599999976532 33445678899999999999999999999965


Q ss_pred             CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcccc
Q 013016          161 SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLC  240 (451)
Q Consensus       161 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  240 (451)
                      + ..|||||||+||+|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        80 ~-~~~lvmE~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~  156 (277)
T d1xbba_          80 E-SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  156 (277)
T ss_dssp             S-SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             C-CEEEEEEcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhh
Confidence            4 578999999999999998875  5599999999999999999999999999999999999999999999999999854


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccC
Q 013016          241 SNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG  320 (451)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  320 (451)
                      ......                                                    .........||+.|||||++.+
T Consensus       157 ~~~~~~----------------------------------------------------~~~~~~~~~gt~~y~APE~l~~  184 (277)
T d1xbba_         157 LRADEN----------------------------------------------------YYKAQTHGKWPVKWYAPECINY  184 (277)
T ss_dssp             CCTTCS----------------------------------------------------EEEC----CCCGGGCCHHHHHH
T ss_pred             cccccc----------------------------------------------------ccccccccCCCceecCchhhcC
Confidence            321100                                                    0111123478999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          321 GSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       321 ~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      ..++.++|||||||++|||+| |+.||.+.+..+....+..+.. ..|.     ..+.++.+||.+||+.||++|||   
T Consensus       185 ~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~-----~~~~~~~~li~~cl~~dp~~RPs---  256 (277)
T d1xbba_         185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-----GCPREMYDLMNLCWTYDVENRPG---  256 (277)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT-----TCCHHHHHHHHHHTCSSTTTSCC---
T ss_pred             CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCc-----ccCHHHHHHHHHHcCCCHhHCcC---
Confidence            899999999999999999998 9999999888888777776542 2222     23448999999999999999999   


Q ss_pred             ChHHH---HcCCCcCC
Q 013016          399 GAADV---KTHPFFKG  411 (451)
Q Consensus       399 ~~~el---l~hp~~~~  411 (451)
                       +.+|   |+|+|++-
T Consensus       257 -~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         257 -FAAVELRLRNYYYDV  271 (277)
T ss_dssp             -HHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHhhCHHhhc
Confidence             8887   56766643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-53  Score=400.13  Aligned_cols=251  Identities=22%  Similarity=0.310  Sum_probs=213.5

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|+++.+.          .||||++++...    ..+.+.+|+.++++++||||+++++++
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~----------~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~HpnIv~~~g~~   68 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQY----------DVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVC   68 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTE----------EEEEEEEESSSS----CHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCC----------EEEEEEECcCcC----CHHHHHHHHHHHHhcCCCceeeEEEEE
Confidence            378999999999999999999986433          399999986532    234677899999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+++.+++||||+++|+|.+++.... ..+++..+++++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        69 ~~~~~~~iv~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a  147 (258)
T d1k2pa_          69 TKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS  147 (258)
T ss_dssp             CCSSSEEEEEECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             eeCCceEEEEEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhh
Confidence            99999999999999999998876543 45899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                      .......||+.|+|||++
T Consensus       148 ~~~~~~~~------------------------------------------------------~~~~~~~~t~~y~aPE~~  173 (258)
T d1k2pa_         148 RYVLDDEY------------------------------------------------------TSSVGSKFPVRWSPPEVL  173 (258)
T ss_dssp             CBCSSSSC------------------------------------------------------CCCCCSCCCGGGCCHHHH
T ss_pred             eeccCCCc------------------------------------------------------eeecccCCCCCcCCcHHh
Confidence            53321100                                                      111124789999999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||+| |+.||...+..+....+..+.....    +...+.++.+||.+||+.||++|||  
T Consensus       174 ~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~dP~~RPt--  247 (258)
T d1k2pa_         174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----PHLASEKVYTIMYSCWHEKADERPT--  247 (258)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHTTCSSGGGSCC--
T ss_pred             cCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccccHHHHHHHHHHccCCHhHCcC--
Confidence            99999999999999999999998 8999999999888888877543222    2234458999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        ++||++|
T Consensus       248 --~~eil~~  254 (258)
T d1k2pa_         248 --FKILLSN  254 (258)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHHH
Confidence              9999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-53  Score=408.55  Aligned_cols=267  Identities=26%  Similarity=0.320  Sum_probs=209.0

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|+++++||+|+||+||+|+++.+++         .||||++..... .......+.+|+.+|++++|+||+++++++
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~---------~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~nii~~~~~~   78 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQ---------KVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEIC   78 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEC----C-TTSSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEEehhhc-chHHHHHHHHHHHHHHHhcCCCccceEeee
Confidence            3789999999999999999999987665         499999976533 233445677899999999999999999988


Q ss_pred             Ee--------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCE
Q 013016          159 EA--------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHI  230 (451)
Q Consensus       159 ~~--------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~  230 (451)
                      ..        .+++|+||||+.++.+..+...  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        79 ~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~--~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~  156 (318)
T d3blha1          79 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL  156 (318)
T ss_dssp             EC----------CEEEEEECCCEEHHHHHTCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             ecccccccccCceEEEEEeccCCCccchhhhc--ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcE
Confidence            54        4578999999977666544333  3569999999999999999999999999999999999999999999


Q ss_pred             EEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCC
Q 013016          231 MLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH  310 (451)
Q Consensus       231 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  310 (451)
                      ||+|||++.........                                                   ......+.+||+
T Consensus       157 kl~dfg~~~~~~~~~~~---------------------------------------------------~~~~~~~~~gT~  185 (318)
T d3blha1         157 KLADFGLARAFSLAKNS---------------------------------------------------QPNRYTNRVVTL  185 (318)
T ss_dssp             EECCCTTCEECCC--------------------------------------------------------CCCCCSCCSCG
T ss_pred             Eeeecceeeeccccccc---------------------------------------------------ccccccceecCH
Confidence            99999998533211000                                                   011112347999


Q ss_pred             CccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCCCCCCCc----------------
Q 013016          311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM----------------  373 (451)
Q Consensus       311 ~y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------  373 (451)
                      .|+|||++.+. .|+.++|||||||++|||++|+.||.+......+..+......++.......                
T Consensus       186 ~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T d3blha1         186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK  265 (318)
T ss_dssp             GGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCC
T ss_pred             HHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhccccccc
Confidence            99999999875 5899999999999999999999999988877776665543322222111110                


Q ss_pred             -----------ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          374 -----------SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       374 -----------~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                                 .+.++++||.+||++||++|||    ++|+|+||||+..
T Consensus       266 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~s----a~elL~Hpff~~~  311 (318)
T d3blha1         266 RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDALNHDFFWSD  311 (318)
T ss_dssp             BCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGSSS
T ss_pred             ccchhhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHHcChhhccC
Confidence                       1336789999999999999999    9999999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-53  Score=403.28  Aligned_cols=258  Identities=23%  Similarity=0.334  Sum_probs=209.2

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +.+++|++.+.||+|+||+||+|+++++.+          ||||++.....    ..+.+.+|+.++++++|+|||++++
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~----------vAiK~l~~~~~----~~~~~~~E~~~l~~l~h~nIv~~~g   79 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYA   79 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEE----------EEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCE----------EEEEEECcccC----CHHHHHHHHHHHHhcccCCEeEEEE
Confidence            445789999999999999999999876643          99999975532    2356778999999999999999999


Q ss_pred             EEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccC
Q 013016          157 EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD  236 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg  236 (451)
                      ++.+ +.+++|||||++|+|..++.......+++..+..++.||+.||+|||++||+||||||+||||+.++++||+|||
T Consensus        80 ~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfG  158 (285)
T d1fmka3          80 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  158 (285)
T ss_dssp             EECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccc
Confidence            9854 567899999999999998876555669999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcc
Q 013016          237 LSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE  316 (451)
Q Consensus       237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  316 (451)
                      +++.....                                                      .........||+.|+|||
T Consensus       159 la~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE  184 (285)
T d1fmka3         159 LARLIEDN------------------------------------------------------EYTARQGAKFPIKWTAPE  184 (285)
T ss_dssp             TTC--------------------------------------------------------------------CCGGGSCHH
T ss_pred             hhhhccCC------------------------------------------------------CceeeccccccccccChH
Confidence            98533211                                                      011112247899999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCC
Q 013016          317 VASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG  395 (451)
Q Consensus       317 ~~~~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt  395 (451)
                      ++.+..++.++|||||||++|||++| .+|+......+.+..+..+... +  ... ..+.++++||.+||+.||++||+
T Consensus       185 ~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~-~--~~~-~~~~~l~~li~~cl~~dP~~Rps  260 (285)
T d1fmka3         185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-P--CPP-ECPESLHDLMCQCWRKEPEERPT  260 (285)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-C--CCT-TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC-C--CCc-ccCHHHHHHHHHHcccCHhHCcC
Confidence            99999999999999999999999995 5555666666666666655321 1  112 23448999999999999999999


Q ss_pred             CCCChHHHHc--CCCcCC
Q 013016          396 SKRGAADVKT--HPFFKG  411 (451)
Q Consensus       396 ~~~~~~ell~--hp~~~~  411 (451)
                          +++|+.  |+||+.
T Consensus       261 ----~~~i~~~L~~~~~~  274 (285)
T d1fmka3         261 ----FEYLQAFLEDYFTS  274 (285)
T ss_dssp             ----HHHHHHHHHTTTSC
T ss_pred             ----HHHHHHHHhhhhcC
Confidence                999987  889987

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-52  Score=410.24  Aligned_cols=260  Identities=27%  Similarity=0.374  Sum_probs=207.1

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|.++.+++         .||||++.+... .....+.+.+|+.+|+.++|||||+++++|.
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~---------~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~   87 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGA---------KVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFT   87 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCC---------EEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEEchhhc-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEec
Confidence            689999999999999999999987665         599999976432 3345567888999999999999999999997


Q ss_pred             eCC------eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 ASN------FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~~~------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      ..+      ++||||||| +.+|..+++.   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        88 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~  163 (346)
T d1cm8a_          88 PDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL  163 (346)
T ss_dssp             SCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             cCccccccceEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccc
Confidence            665      579999999 7888887765   459999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|.....                                                          .....+||+.|+
T Consensus       164 Dfg~a~~~~~----------------------------------------------------------~~~~~~~t~~y~  185 (346)
T d1cm8a_         164 DFGLARQADS----------------------------------------------------------EMTGYVVTRWYR  185 (346)
T ss_dssp             CCTTCEECCS----------------------------------------------------------SCCSSCSCGGGC
T ss_pred             cccceeccCC----------------------------------------------------------cccccccccccc
Confidence            9999853211                                                          111347999999


Q ss_pred             CcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-----------------------CCCC
Q 013016          314 SPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF-----------------------PTQS  369 (451)
Q Consensus       314 aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-----------------------~~~~  369 (451)
                      |||++.+. .++.++|||||||++|+|++|+.||.+.+....+..+.......                       ....
T Consensus       186 aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (346)
T d1cm8a_         186 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKD  265 (346)
T ss_dssp             CTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCC
T ss_pred             CHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccc
Confidence            99999875 46899999999999999999999999887766655544321111                       0000


Q ss_pred             ---CCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcc
Q 013016          370 ---PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFA  415 (451)
Q Consensus       370 ---~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~  415 (451)
                         .....+.++++||++||..||.+|||    +.|||+||||+++...
T Consensus       266 ~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         266 FASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPYFESLHDT  310 (346)
T ss_dssp             GGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTC--
T ss_pred             hHHhccCCCHHHHHHHHHHCcCChhHCcC----HHHHhcChhhCcCCCc
Confidence               01122348999999999999999999    9999999999997644

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-52  Score=396.77  Aligned_cols=257  Identities=24%  Similarity=0.343  Sum_probs=205.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAE  157 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~  157 (451)
                      ..++|++.+.||+|+||+||+|.+....+      .+..||||++....  .......+.+|+.++++++|||||+++++
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~------~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~   76 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPEN------PALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGV   76 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--------CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCc------eeEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34789999999999999999999865432      23358999986542  33445678889999999999999999999


Q ss_pred             EEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCc
Q 013016          158 FEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL  237 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  237 (451)
                      +. .+.+|+|||||++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        77 ~~-~~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~  154 (273)
T d1mp8a_          77 IT-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  154 (273)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             Ee-cCeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchh
Confidence            86 567899999999999999876653 4699999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccc
Q 013016          238 SLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV  317 (451)
Q Consensus       238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  317 (451)
                      |+.....                                                      .........||+.|+|||+
T Consensus       155 a~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~apE~  180 (273)
T d1mp8a_         155 SRYMEDS------------------------------------------------------TYYKASKGKLPIKWMAPES  180 (273)
T ss_dssp             ----------------------------------------------------------------------CCGGGCCHHH
T ss_pred             heeccCC------------------------------------------------------cceeccceecCcccchhhH
Confidence            8532211                                                      0111123468999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCC
Q 013016          318 ASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS  396 (451)
Q Consensus       318 ~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~  396 (451)
                      +.+..++.++|||||||++|||++ |..||...+..+.+..+..+....   .++ ..+.++.+||.+||+.||++||| 
T Consensus       181 l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~---~~~-~~~~~~~~li~~cl~~dp~~Rps-  255 (273)
T d1mp8a_         181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPP-NCPPTLYSLMTKCWAYDPSRRPR-  255 (273)
T ss_dssp             HHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCT-TCCHHHHHHHHHHTCSSGGGSCC-
T ss_pred             hccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCC-CCCHHHHHHHHHHcCCCHhHCcC-
Confidence            999999999999999999999998 899999998888888887764321   112 23448999999999999999999 


Q ss_pred             CCChHHHHcC
Q 013016          397 KRGAADVKTH  406 (451)
Q Consensus       397 ~~~~~ell~h  406 (451)
                         +.||++|
T Consensus       256 ---~~ei~~~  262 (273)
T d1mp8a_         256 ---FTELKAQ  262 (273)
T ss_dssp             ---HHHHHHH
T ss_pred             ---HHHHHHH
Confidence               9999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-52  Score=409.71  Aligned_cols=259  Identities=26%  Similarity=0.407  Sum_probs=205.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      -+|...++||+|+||+||+|+++.+++         .||||++.+..       ....+|+.+|++++|+||++++++|.
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~---------~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~~~~~~~   83 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGE---------LVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFY   83 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCC---------EEEEEEEECCS-------SSCCHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCC---------EEEEEEECccc-------hHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence            359999999999999999999987765         59999997542       12235999999999999999999985


Q ss_pred             eC------CeEEEEEeeccCCchhhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEE
Q 013016          160 AS------NFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIM  231 (451)
Q Consensus       160 ~~------~~~~lV~E~~~ggsL~~~l~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~k  231 (451)
                      ..      .++|||||||+++.+..+.. ......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|
T Consensus        84 ~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~k  163 (350)
T d1q5ka_          84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK  163 (350)
T ss_dssp             EC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEE
T ss_pred             ecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCcee
Confidence            43      36899999996664444432 22345699999999999999999999999999999999999999875 899


Q ss_pred             EeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCC
Q 013016          232 LSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE  311 (451)
Q Consensus       232 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  311 (451)
                      |+|||++......                                                        ....+.+||+.
T Consensus       164 l~DFG~a~~~~~~--------------------------------------------------------~~~~~~~gt~~  187 (350)
T d1q5ka_         164 LCDFGSAKQLVRG--------------------------------------------------------EPNVSYICSRY  187 (350)
T ss_dssp             ECCCTTCEECCTT--------------------------------------------------------SCCCSCCSCTT
T ss_pred             EecccchhhccCC--------------------------------------------------------ccccccccccc
Confidence            9999998533210                                                        11123479999


Q ss_pred             ccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-----------------CCCCCC-----
Q 013016          312 YVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP-----------------LTFPTQ-----  368 (451)
Q Consensus       312 y~aPE~~~~~-~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-----------------~~~~~~-----  368 (451)
                      |+|||.+.+. .++.++|||||||++|||++|+.||...+..+.+..+....                 ..++..     
T Consensus       188 y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (350)
T d1q5ka_         188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW  267 (350)
T ss_dssp             SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCG
T ss_pred             ccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCch
Confidence            9999998764 68999999999999999999999999888777766664310                 011110     


Q ss_pred             --CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          369 --SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       369 --~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                        ......+.++.+||.+||++||++|||    +.|+|+||||+++..
T Consensus       268 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         268 TKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSFFDELRD  311 (350)
T ss_dssp             GGTSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGGGGGC
T ss_pred             hhhcccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhccccC
Confidence              011123448999999999999999999    999999999998543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-52  Score=393.85  Aligned_cols=258  Identities=22%  Similarity=0.258  Sum_probs=203.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      +.|.+.++||+|+||+||+|.++.+..     .....||||++.....  ......+.+|+.++++++|||||++++++.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~-----~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~~~g~~~   79 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSG-----KKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVIS   79 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC--------CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCC-----EEEEEEEEEEECcccC--hHHHHHHHHHHHHHHhcCCCCEeeeeEEEe
Confidence            679999999999999999999876532     1123599999975432  233456788999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      +.+.+++|||||.+++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  158 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  158 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             cCCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhh
Confidence            9999999999999999998876653 569999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                    .........||+.|||||++.
T Consensus       159 ~~~~~~~----------------------------------------------------~~~~~~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         159 VLEDDPE----------------------------------------------------ATYTTSGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             -------------------------------------------------------------------CCCGGGSCHHHHH
T ss_pred             cccCCCc----------------------------------------------------cceEeccCCCCccccCHHHHc
Confidence            4321100                                                    001112346899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKR  398 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~  398 (451)
                      +..++.++|||||||++|||++| .+|+...+..+.+..+..+... +.   +...+..+.+|+.+||+.||++|||   
T Consensus       187 ~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~-~~---~~~~~~~l~~li~~cl~~~p~~RPt---  259 (283)
T d1mqba_         187 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL-PT---PMDCPSAIYQLMMQCWQQERARRPK---  259 (283)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-CC---CTTCBHHHHHHHHHHTCSSTTTSCC---
T ss_pred             cCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC-CC---chhhHHHHHHHHHHHCcCCHhHCcC---
Confidence            99999999999999999999995 5556666666676666655322 11   1223448999999999999999999   


Q ss_pred             ChHHHHc
Q 013016          399 GAADVKT  405 (451)
Q Consensus       399 ~~~ell~  405 (451)
                       +.||++
T Consensus       260 -~~eil~  265 (283)
T d1mqba_         260 -FADIVS  265 (283)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-52  Score=396.75  Aligned_cols=262  Identities=23%  Similarity=0.347  Sum_probs=211.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|+++.+++         .||||+++... ........+.+|+.+++.++||||+++++++.
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~---------~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   71 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHE---------IVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLH   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCC---------EEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCc---------EEEEEEEehhh-CChHHHHHHHHHHHHHHhcCcCCEEeeccccc
Confidence            689999999999999999999987765         59999997553 23345677888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ..++.++|+|++.|++|..++...  +.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.+.
T Consensus        72 ~~~~~~iv~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~  149 (292)
T d1unla_          72 SDKKLTLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR  149 (292)
T ss_dssp             CSSEEEEEEECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cccceeEEeeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhh
Confidence            999999999999999988877654  568999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      .......                                                       ......+++.|+|||++.
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~pe~~~  174 (292)
T d1unla_         150 AFGIPVR-------------------------------------------------------CYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             ECCSCCS-------------------------------------------------------CCCSCCSCGGGCCHHHHT
T ss_pred             cccCCCc-------------------------------------------------------cceeeccccchhhhhHhc
Confidence            4321111                                                       011225677899999988


Q ss_pred             CCC-CCcchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHhcCCCCCC------------------------CCCCCCc
Q 013016          320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAA-PSNETTLRNIVKKPLTFP------------------------TQSPSSM  373 (451)
Q Consensus       320 ~~~-~~~~~DIwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~~~------------------------~~~~~~~  373 (451)
                      +.. ++.++|||||||++|||++|+.||.. .+..+.+..+........                        .......
T Consensus       175 ~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (292)
T d1unla_         175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPK  254 (292)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTT
T ss_pred             cCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhcccc
Confidence            765 68999999999999999999998654 444444444432111100                        0001112


Q ss_pred             ChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCC
Q 013016          374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL  412 (451)
Q Consensus       374 ~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~  412 (451)
                      .+..+.+||++||++||.+|||    ++|||+||||++.
T Consensus       255 ~s~~~~dll~~mL~~dP~~R~s----a~e~L~Hp~f~~~  289 (292)
T d1unla_         255 LNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFSDF  289 (292)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGSSC
T ss_pred             CCHHHHHHHHHHccCChhHCcC----HHHHhcChhhcCC
Confidence            2348899999999999999999    9999999999983

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-52  Score=405.01  Aligned_cols=265  Identities=22%  Similarity=0.319  Sum_probs=206.6

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|+++++||+|+||+||+|.++.+++         .||||++.+..  .....+.+.+|+.+|+.++||||+++++++.
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~---------~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~   76 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKV---------RVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIR   76 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCS---------EEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEEC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCc---------EEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence            569999999999999999999887765         49999997542  2344566788999999999999999999997


Q ss_pred             eCC-----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 ASN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ...     ++||||+ +.||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|
T Consensus        77 ~~~~~~~~~~~l~~~-~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~D  152 (345)
T d1pmea_          77 APTIEQMKDVYLVTH-LMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD  152 (345)
T ss_dssp             CSSTTTCCCEEEEEE-CCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             eccccccceEEEEEe-ecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcc
Confidence            653     3556555 5599999999763   599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++........                                                    ........+||+.|+|
T Consensus       153 fG~a~~~~~~~~----------------------------------------------------~~~~~~~~~gt~~y~a  180 (345)
T d1pmea_         153 FGLARVADPDHD----------------------------------------------------HTGFLTEYVATRWYRA  180 (345)
T ss_dssp             CTTCEECCGGGC----------------------------------------------------BCCTTCCCCSCGGGCC
T ss_pred             cCceeeccCCCc----------------------------------------------------cceeeccccccceech
Confidence            999854321100                                                    1111223479999999


Q ss_pred             cccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--------------------CCCC-----
Q 013016          315 PEVASG-GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--------------------FPTQ-----  368 (451)
Q Consensus       315 PE~~~~-~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------------------~~~~-----  368 (451)
                      ||++.. ..++.++||||+||++|+|++|+.||......+...........                    .+..     
T Consensus       181 PE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (345)
T d1pmea_         181 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW  260 (345)
T ss_dssp             GGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCH
T ss_pred             HHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCH
Confidence            999855 45789999999999999999999999887765554443321100                    0000     


Q ss_pred             --CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCccc
Q 013016          369 --SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL  416 (451)
Q Consensus       369 --~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~  416 (451)
                        ..+. .+.++++||.+||++||.+|||    +.|+|+||||++.....
T Consensus       261 ~~~~~~-~s~~~~~li~~~L~~dP~~R~t----a~e~L~hpf~~~~~~~~  305 (345)
T d1pmea_         261 NRLFPN-ADSKALDLLDKMLTFNPHKRIE----VEQALAHPYLEQYYDPS  305 (345)
T ss_dssp             HHHCTT-SCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTTCCGG
T ss_pred             HHhCCC-CCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhccCCCCc
Confidence              0112 2337999999999999999999    99999999999865543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.1e-52  Score=402.64  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=203.9

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~  157 (451)
                      .++|+++++||+|+||+||+|+++.+++         .||||++.+..      ...+.+|+.+|+.+. ||||++++++
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~---------~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~   98 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNE---------KVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADI   98 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCC---------EEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEE
Confidence            3789999999999999999999887665         59999997542      245667999999995 9999999999


Q ss_pred             EEe--CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCC-CEEEec
Q 013016          158 FEA--SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSD  234 (451)
Q Consensus       158 ~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~D  234 (451)
                      |..  ..++|+|||||.+++|.++.     +.+++..++.++.||+.||+|||++||+||||||+||||+.++ .+||+|
T Consensus        99 ~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~D  173 (328)
T d3bqca1          99 VKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLID  173 (328)
T ss_dssp             EECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             EEecCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecc
Confidence            974  45799999999999997763     3499999999999999999999999999999999999999765 699999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||+|......                                                        ......+||+.|+|
T Consensus       174 FG~a~~~~~~--------------------------------------------------------~~~~~~~~t~~y~a  197 (328)
T d3bqca1         174 WGLAEFYHPG--------------------------------------------------------QEYNVRVASRYFKG  197 (328)
T ss_dssp             GGGCEECCTT--------------------------------------------------------CCCCSCCSCGGGCC
T ss_pred             cccceeccCC--------------------------------------------------------CcccccccCccccC
Confidence            9998533211                                                        01123478999999


Q ss_pred             cccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhc-------------CCCC---------------
Q 013016          315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNET-TLRNIVK-------------KPLT---------------  364 (451)
Q Consensus       315 PE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~-~~~~i~~-------------~~~~---------------  364 (451)
                      ||.+.+.. ++.++|||||||++|+|++|+.||....... ....+..             ....               
T Consensus       198 PE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (328)
T d3bqca1         198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK  277 (328)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCC
T ss_pred             cccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccccc
Confidence            99988754 7999999999999999999999997754332 2111110             0000               


Q ss_pred             ----CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          365 ----FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       365 ----~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                          ..........+.++++||++||.+||++|||    ++|+|+||||+.+.|
T Consensus       278 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         278 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREAMEHPYFYTVVK  327 (328)
T ss_dssp             CGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTSCC
T ss_pred             chhhcccccccccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCCC
Confidence                0000111223448999999999999999999    999999999999876

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-52  Score=409.28  Aligned_cols=271  Identities=24%  Similarity=0.359  Sum_probs=206.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|+++.+++         .||||++.+... .......+.+|+.++++++|||||+++++|.
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~---------~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~   86 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDR---------NVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFT   86 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTE---------EEEEEEEESTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCC---------EEEEEEEChhhc-CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEe
Confidence            689999999999999999999987665         599999976543 3344567788999999999999999999995


Q ss_pred             e------CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEe
Q 013016          160 A------SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS  233 (451)
Q Consensus       160 ~------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~  233 (451)
                      .      .+++|+|||||.++.+ +.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++
T Consensus        87 ~~~~~~~~~~~~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~  161 (355)
T d2b1pa1          87 PQKTLEEFQDVYLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL  161 (355)
T ss_dssp             SCCSTTTCCEEEEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             cccccccCceeEEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeee
Confidence            3      3689999999965544 4443    348999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||++.....                                                        .......+||+.|+
T Consensus       162 df~~~~~~~~--------------------------------------------------------~~~~~~~~~t~~y~  185 (355)
T d2b1pa1         162 DFGLARTAGT--------------------------------------------------------SFMMTPYVVTRYYR  185 (355)
T ss_dssp             CCCC-----------------------------------------------------------------------CCTTC
T ss_pred             chhhhhcccc--------------------------------------------------------cccccccccccccc
Confidence            9998743211                                                        11112347999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC----------------------CCCCC--
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT----------------------FPTQS--  369 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~----------------------~~~~~--  369 (451)
                      |||++.+..++.++||||+||++|+|++|+.||.+.+.......+......                      .....  
T Consensus       186 aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (355)
T d2b1pa1         186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP  265 (355)
T ss_dssp             CHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHH
T ss_pred             ChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccc
Confidence            999999999999999999999999999999999988776665555431111                      00000  


Q ss_pred             -------CC------CcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCcccccccCCCCC
Q 013016          370 -------PS------SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI  425 (451)
Q Consensus       370 -------~~------~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~~~~~~~~~~~~  425 (451)
                             ..      ...+.++++||++||.+||++|||    |+|||+||||++...+......+|++
T Consensus       266 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----a~elL~Hpw~~~~~~~~~~~~~~~~~  330 (355)
T d2b1pa1         266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS----VDDALQHPYINVWYDPAEVEAPPPQI  330 (355)
T ss_dssp             HHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTGGGCCHHHHTCCCC--
T ss_pred             cccccccccccccccccCCHHHHHHHHHHCcCChhHCcC----HHHHhcCcccCCCCCcccccCCCCCC
Confidence                   00      012337899999999999999999    99999999999854444444444433

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-52  Score=393.75  Aligned_cols=260  Identities=21%  Similarity=0.283  Sum_probs=205.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEF  158 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~  158 (451)
                      .++|++.++||+|+||+||+|.++...+      ..+.||||++.+.........+.+.+|+.++++++|||||++++++
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~------~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~   80 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSG------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   80 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTS------CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCC------cEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            4789999999999999999998765432      1234999999877666666677889999999999999999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCcc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS  238 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a  238 (451)
                      .+ +..++|||||++|+|.+++.... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~-~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~  158 (273)
T d1u46a_          81 LT-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM  158 (273)
T ss_dssp             CS-SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             ee-cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhh
Confidence            75 46789999999999998776542 45999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccc
Q 013016          239 LCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA  318 (451)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  318 (451)
                      ........                                                    .........|+..|+|||++
T Consensus       159 ~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~aPE~~  186 (273)
T d1u46a_         159 RALPQNDD----------------------------------------------------HYVMQEHRKVPFAWCAPESL  186 (273)
T ss_dssp             EECCC-CC----------------------------------------------------EEEC-----CCGGGCCHHHH
T ss_pred             hhcccCCC----------------------------------------------------cceecCccccCcccCCHHHH
Confidence            64321100                                                    01111234678899999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          319 SGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       319 ~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      .+..++.++|||||||++|||+| |+.||.+.+..+.+..+......++..  + ..+..+.+||.+||+.||++|||  
T Consensus       187 ~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~--~-~~~~~l~~li~~cl~~dp~~RPt--  261 (273)
T d1u46a_         187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP--E-DCPQDIYNVMVQCWAHKPEDRPT--  261 (273)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCC--T-TCCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             hCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCc--c-cccHHHHHHHHHHcCCChhHCcC--
Confidence            99999999999999999999998 899999999999988887765444321  2 23448999999999999999999  


Q ss_pred             CChHHHHc
Q 013016          398 RGAADVKT  405 (451)
Q Consensus       398 ~~~~ell~  405 (451)
                        +.||++
T Consensus       262 --~~ei~~  267 (273)
T d1u46a_         262 --FVALRD  267 (273)
T ss_dssp             --HHHHHH
T ss_pred             --HHHHHH
Confidence              998863

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=399.32  Aligned_cols=256  Identities=16%  Similarity=0.208  Sum_probs=205.7

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      .+|+++++||+|+||+||+|.+..+++.     ....||+|.+....  .....+.+.+|+.++++++|||||++++++.
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~   81 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICL   81 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC---------CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCE-----EEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            5799999999999999999998766532     12248888886442  3334567888999999999999999999998


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      ++ ..++|+|++.+|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.
T Consensus        82 ~~-~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          82 TS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             SS-SEEEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             cC-CeeEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            75 467888889899999887765 3569999999999999999999999999999999999999999999999999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCccccc
Q 013016          240 CSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS  319 (451)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  319 (451)
                      ......                                                     .........||+.|||||++.
T Consensus       160 ~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~APE~l~  186 (317)
T d1xkka_         160 LLGAEE-----------------------------------------------------KEYHAEGGKVPIKWMALESIL  186 (317)
T ss_dssp             HTTTTC-----------------------------------------------------C--------CCTTTSCHHHHH
T ss_pred             eccccc-----------------------------------------------------ccccccccccCccccChHHHh
Confidence            432110                                                     111122346899999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCC
Q 013016          320 GGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK  397 (451)
Q Consensus       320 ~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~  397 (451)
                      ++.++.++|||||||++|||+| |..||.+.+..+....+..+.. ..+     ...+.++.+|+.+||+.||.+|||  
T Consensus       187 ~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p-----~~~~~~~~~li~~cl~~dP~~RPs--  259 (317)
T d1xkka_         187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-----PICTIDVYMIMVKCWMIDADSRPK--  259 (317)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCC--
T ss_pred             cCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-----cccCHHHHHHHHHhCCCChhhCcC--
Confidence            9999999999999999999998 8999998888777777766542 222     223448999999999999999999  


Q ss_pred             CChHHHHcC
Q 013016          398 RGAADVKTH  406 (451)
Q Consensus       398 ~~~~ell~h  406 (451)
                        +.||+.|
T Consensus       260 --~~eil~~  266 (317)
T d1xkka_         260 --FRELIIE  266 (317)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHHH
Confidence              9999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-52  Score=392.35  Aligned_cols=247  Identities=21%  Similarity=0.313  Sum_probs=204.2

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeE
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYA  156 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~  156 (451)
                      +..++|++.++||+|+||.||+|.+++.           .||||++++..     ..+.+.+|++++++++||||+++++
T Consensus         4 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-----------~vAvK~i~~~~-----~~~~~~~E~~~l~~l~HpnIv~~~g   67 (262)
T d1byga_           4 LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLG   67 (262)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTE-----------EEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEE
T ss_pred             cCHHHeEEeEEEecCCCeEEEEEEECCe-----------EEEEEEECcHH-----HHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            4568899999999999999999998643           39999997542     3356778999999999999999999


Q ss_pred             EEEe-CCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEecc
Q 013016          157 EFEA-SNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF  235 (451)
Q Consensus       157 ~~~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Df  235 (451)
                      ++.+ .+.+|+||||+++|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.+|.+||+||
T Consensus        68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~df  147 (262)
T d1byga_          68 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF  147 (262)
T ss_dssp             EECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccc
Confidence            9854 567899999999999999997654456899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |++.....                                                          ......+|..|+||
T Consensus       148 g~s~~~~~----------------------------------------------------------~~~~~~~~~~y~aP  169 (262)
T d1byga_         148 GLTKEASS----------------------------------------------------------TQDTGKLPVKWTAP  169 (262)
T ss_dssp             CC----------------------------------------------------------------------CCTTTSCH
T ss_pred             ccceecCC----------------------------------------------------------CCccccccccCCCh
Confidence            99843211                                                          11123678899999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCC-CCCCCCCCCcChHHHHHHHHHhcccCcCCc
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPL-TFPTQSPSSMSEYHARDLISGLLNKDPCNR  393 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R  393 (451)
                      |++.+..++.++|||||||++|||+| |+.||......+....+..+.. ..+.     ..+.++.+||.+||+.||.+|
T Consensus       170 E~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         170 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-----GCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCT-----TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc-----cCCHHHHHHHHHHcccCHhHC
Confidence            99999999999999999999999998 7999998888888888776532 2222     233489999999999999999


Q ss_pred             CCCCCChHHHHcC
Q 013016          394 LGSKRGAADVKTH  406 (451)
Q Consensus       394 pt~~~~~~ell~h  406 (451)
                      ||    +.+|+++
T Consensus       245 ps----~~~l~~~  253 (262)
T d1byga_         245 PS----FLQLREQ  253 (262)
T ss_dssp             CC----HHHHHHH
T ss_pred             cC----HHHHHHH
Confidence            99    9998763

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-52  Score=397.70  Aligned_cols=262  Identities=18%  Similarity=0.272  Sum_probs=199.1

Q ss_pred             cCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccceeEE
Q 013016           79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLYAE  157 (451)
Q Consensus        79 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~~~  157 (451)
                      .++|++.++||+|+||+||+|.+....+.    ..+..||||++.....  ......+..|..++.++ +|+||+.++++
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~----~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   85 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKT----ATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGA   85 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSS----SCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcc----cCCeEEEEEEEccccC--cHHHHHHHHHHHHHHhhcCCCeEEEeeee
Confidence            37899999999999999999998765432    2334699999975432  23344566677777666 68999999998


Q ss_pred             EEeC-CeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 013016          158 FEAS-NFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV  222 (451)
Q Consensus       158 ~~~~-~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NI  222 (451)
                      +... +.+++|||||+||+|.+++....              ...+++..++.++.||+.||+|||++|||||||||+||
T Consensus        86 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NI  165 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  165 (299)
T ss_dssp             ECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             eccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccce
Confidence            8654 57899999999999999987542              23589999999999999999999999999999999999


Q ss_pred             EEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccccccc
Q 013016          223 LVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR  302 (451)
Q Consensus       223 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (451)
                      ||+.++.+||+|||+|+......                                                     ....
T Consensus       166 Ll~~~~~~Kl~DFGla~~~~~~~-----------------------------------------------------~~~~  192 (299)
T d1ywna1         166 LLSEKNVVKICDFGLARDIYKDP-----------------------------------------------------DYVR  192 (299)
T ss_dssp             EECGGGCEEECC------CCSCT-----------------------------------------------------TSCC
T ss_pred             eECCCCcEEEccCcchhhccccc-----------------------------------------------------cccc
Confidence            99999999999999985332111                                                     1112


Q ss_pred             ccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHH
Q 013016          303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL  381 (451)
Q Consensus       303 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l  381 (451)
                      .....||+.|||||++.+..++.++|||||||++|||+|| ..||......+.+..++.....++  . +...+.++.+|
T Consensus       193 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l~~l  269 (299)
T d1ywna1         193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--A-PDYTTPEMYQT  269 (299)
T ss_dssp             TTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC--C-CTTCCHHHHHH
T ss_pred             cCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC--C-CccCCHHHHHH
Confidence            2245799999999999999999999999999999999986 568887665555544443322221  1 12234489999


Q ss_pred             HHHhcccCcCCcCCCCCChHHHHcC
Q 013016          382 ISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       382 l~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      +.+||+.||++|||    +.||++|
T Consensus       270 i~~cl~~dP~~Rpt----~~eil~~  290 (299)
T d1ywna1         270 MLDCWHGEPSQRPT----FSELVEH  290 (299)
T ss_dssp             HHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHcCCChhHCcC----HHHHHHH
Confidence            99999999999999    9999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-51  Score=392.97  Aligned_cols=266  Identities=19%  Similarity=0.264  Sum_probs=211.6

Q ss_pred             CCcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccc
Q 013016           75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPT  153 (451)
Q Consensus        75 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~  153 (451)
                      +.+..++|++.++||+|+||.||+|++....+.  ....+..||||++.+...  ......+..|...+.++ +|||||+
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~--~~~~~~~vAvK~~~~~~~--~~~~~~~~~e~~~l~~~~~HpnIv~   83 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIIN   83 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC------CCCEEEEEEECCCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcc--cccCceEEEEEEECcccC--hHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            445558899999999999999999998765432  122334699999976532  33445677788888887 7999999


Q ss_pred             eeEEEEeCCeEEEEEeeccCCchhhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 013016          154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQP--------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP  219 (451)
Q Consensus       154 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp  219 (451)
                      ++++|.+++..++|||||.+|+|.+++....              ...+++..++.++.||+.||+|||++|||||||||
T Consensus        84 ~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp  163 (299)
T d1fgka_          84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  163 (299)
T ss_dssp             EEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             cccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecc
Confidence            9999999999999999999999999997553              24589999999999999999999999999999999


Q ss_pred             CcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccc
Q 013016          220 ENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPV  299 (451)
Q Consensus       220 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (451)
                      +|||++.++.+||+|||++......                                                     ..
T Consensus       164 ~NiLl~~~~~~kl~dfg~~~~~~~~-----------------------------------------------------~~  190 (299)
T d1fgka_         164 RNVLVTEDNVMKIADFGLARDIHHI-----------------------------------------------------DY  190 (299)
T ss_dssp             GGEEECTTCCEEECSTTCCCCGGGC-----------------------------------------------------CT
T ss_pred             cceeecCCCCeEeccchhhcccccc-----------------------------------------------------cc
Confidence            9999999999999999998543211                                                     11


Q ss_pred             cccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHH
Q 013016          300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA  378 (451)
Q Consensus       300 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  378 (451)
                      ........||+.|+|||.+.++.|+.++|||||||++|||++ |..||.+......+..+..+.....    +...+.++
T Consensus       191 ~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~----p~~~~~~l  266 (299)
T d1fgka_         191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK----PSNCTNEL  266 (299)
T ss_dssp             TCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC----CSSCCHHH
T ss_pred             ccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCC----CccchHHH
Confidence            112234578999999999999999999999999999999998 7999998888887777766532211    12234489


Q ss_pred             HHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          379 RDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       379 ~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      .+||.+||+.||++|||    +.||++
T Consensus       267 ~~li~~cl~~dP~~Rps----~~eil~  289 (299)
T d1fgka_         267 YMMMRDCWHAVPSQRPT----FKQLVE  289 (299)
T ss_dssp             HHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHHccCCHhHCcC----HHHHHH
Confidence            99999999999999999    999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-51  Score=393.24  Aligned_cols=259  Identities=19%  Similarity=0.288  Sum_probs=213.5

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|++.++||+|+||+||+|++++...    ...+..||||++....  .......+.+|+.++++++||||+++++++.
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~----~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLP----YEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSST----TSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCcc----CCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            789999999999999999999875321    1233469999997543  2334567888999999999999999999999


Q ss_pred             eCCeEEEEEeeccCCchhhhhhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 013016          160 ASNFSCIVMEFCSGGDLHSLRHKQP----------------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDL  217 (451)
Q Consensus       160 ~~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dl  217 (451)
                      ..+..++||||+++|+|.+++....                      ...+++..+..|+.||+.||+|||++|||||||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEE
Confidence            9999999999999999999986532                      234899999999999999999999999999999


Q ss_pred             CCCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccc
Q 013016          218 KPENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAE  297 (451)
Q Consensus       218 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (451)
                      ||+|||++.++.+||+|||+|+.....                                                     
T Consensus       167 Kp~NILld~~~~~Kl~DFGls~~~~~~-----------------------------------------------------  193 (301)
T d1lufa_         167 ATRNCLVGENMVVKIADFGLSRNIYSA-----------------------------------------------------  193 (301)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGG-----------------------------------------------------
T ss_pred             cccceEECCCCcEEEccchhheeccCC-----------------------------------------------------
Confidence            999999999999999999998532211                                                     


Q ss_pred             cccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHhcCCCCCCCCCCCCcChH
Q 013016          298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGR-TPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY  376 (451)
Q Consensus       298 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  376 (451)
                      .......+..||+.|+|||++.+..|+.++|||||||++|||++|. .||...+..+.+..+..+.....   +. ..+.
T Consensus       194 ~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~---p~-~~~~  269 (301)
T d1lufa_         194 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC---PE-NCPL  269 (301)
T ss_dssp             GCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CT-TCCH
T ss_pred             ccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC---Cc-cchH
Confidence            1111222357889999999999999999999999999999999985 68999888888888887754221   11 2334


Q ss_pred             HHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          377 HARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       377 ~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ++.+||.+||+.||++|||    +.||++
T Consensus       270 ~~~~li~~cl~~~P~~RPt----~~ev~~  294 (301)
T d1lufa_         270 ELYNLMRLCWSKLPADRPS----FCSIHR  294 (301)
T ss_dssp             HHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            8999999999999999999    999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=404.58  Aligned_cols=260  Identities=23%  Similarity=0.330  Sum_probs=207.3

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|+++++||+|+||+||+|+++.+++         .||||++.+... .......+.+|+.+|+.++|||||++++++.
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~---------~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~   87 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGL---------RVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFT   87 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTE---------EEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEECchhc-ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            679999999999999999999887665         499999976532 2334456778999999999999999999996


Q ss_pred             eC-----CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEec
Q 013016          160 AS-----NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD  234 (451)
Q Consensus       160 ~~-----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  234 (451)
                      ..     ...++||+++.||+|.+++..   +++++..++.++.||+.||+|||++||+||||||+|||++.+|.+|++|
T Consensus        88 ~~~~~~~~~~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~d  164 (348)
T d2gfsa1          88 PARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD  164 (348)
T ss_dssp             SCSSTTTCCCCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             eccccccCceEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccc
Confidence            43     234555666779999998865   4599999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccC
Q 013016          235 FDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS  314 (451)
Q Consensus       235 fg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  314 (451)
                      ||++....                                                          ....+..||+.|+|
T Consensus       165 fg~a~~~~----------------------------------------------------------~~~~~~~g~~~y~a  186 (348)
T d2gfsa1         165 FGLARHTD----------------------------------------------------------DEMTGYVATRWYRA  186 (348)
T ss_dssp             C----CCT----------------------------------------------------------GGGSSSCHHHHTSC
T ss_pred             cchhcccC----------------------------------------------------------cccccccccccccC
Confidence            99974221                                                          01123478999999


Q ss_pred             cccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCCC--------------------CCC---
Q 013016          315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT--------------------QSP---  370 (451)
Q Consensus       315 PE~~~~~~-~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~--------------------~~~---  370 (451)
                      ||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+.......+.                    ...   
T Consensus       187 pE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (348)
T d2gfsa1         187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF  266 (348)
T ss_dssp             HHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCH
T ss_pred             chhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcch
Confidence            99987765 589999999999999999999999988777766666543221110                    000   


Q ss_pred             ---CCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCCc
Q 013016          371 ---SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF  414 (451)
Q Consensus       371 ---~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~~  414 (451)
                         ....+.++++||.+||+.||.+|||    +.|+|+||||++...
T Consensus       267 ~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         267 ANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHAYFAQYHD  309 (348)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGTTTCC
T ss_pred             hhhcCCCCHHHHHHHHHHCcCChhhCcC----HHHHhcCHhhCCCCC
Confidence               0112348999999999999999999    999999999998543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-51  Score=394.84  Aligned_cols=257  Identities=20%  Similarity=0.292  Sum_probs=210.5

Q ss_pred             cccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCcccee
Q 013016           77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTLY  155 (451)
Q Consensus        77 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l~  155 (451)
                      +.+++|++.++||+|+||+||+|+++.++..       ..||||.+....  .....+.+.+|+++|.++ +|||||+++
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~-------~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~   77 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLL   77 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEE-------EEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEE
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeE-------EEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEE
Confidence            4568999999999999999999999876532       137788875432  233456788899999998 799999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQ--------------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN  221 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~N  221 (451)
                      +++.+++.+++||||++||+|.+++...              ....+++..+.+++.||+.||.|||++||+||||||+|
T Consensus        78 ~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~N  157 (309)
T d1fvra_          78 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  157 (309)
T ss_dssp             EEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccce
Confidence            9999999999999999999999998754              24569999999999999999999999999999999999


Q ss_pred             EEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccc
Q 013016          222 VLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAA  301 (451)
Q Consensus       222 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (451)
                      ||++.++.+||+|||++......                                                        .
T Consensus       158 IL~~~~~~~kl~DfG~a~~~~~~--------------------------------------------------------~  181 (309)
T d1fvra_         158 ILVGENYVAKIADFGLSRGQEVY--------------------------------------------------------V  181 (309)
T ss_dssp             EEECGGGCEEECCTTCEESSCEE--------------------------------------------------------C
T ss_pred             EEEcCCCceEEcccccccccccc--------------------------------------------------------c
Confidence            99999999999999998532210                                                        0


Q ss_pred             cccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHH
Q 013016          302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGR-TPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD  380 (451)
Q Consensus       302 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  380 (451)
                      ......||..|+|||.+.+..++.++|||||||++|||++|. .||.+.+..+.+..+..+....   .+. ..+.++.+
T Consensus       182 ~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~---~~~-~~~~~~~~  257 (309)
T d1fvra_         182 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE---KPL-NCDDEVYD  257 (309)
T ss_dssp             CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC---CCT-TBCHHHHH
T ss_pred             cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCC---CCc-cCCHHHHH
Confidence            111236899999999999999999999999999999999965 6788888888888887753211   112 23348999


Q ss_pred             HHHHhcccCcCCcCCCCCChHHHHcC
Q 013016          381 LISGLLNKDPCNRLGSKRGAADVKTH  406 (451)
Q Consensus       381 ll~~~L~~dP~~Rpt~~~~~~ell~h  406 (451)
                      ||.+||+.||++|||    +.||++|
T Consensus       258 li~~cl~~dP~~RPs----~~eil~~  279 (309)
T d1fvra_         258 LMRQCWREKPYERPS----FAQILVS  279 (309)
T ss_dssp             HHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcCCChhHCcC----HHHHHHH
Confidence            999999999999999    9999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-51  Score=394.76  Aligned_cols=271  Identities=21%  Similarity=0.281  Sum_probs=220.7

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcccee
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLY  155 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~  155 (451)
                      .+..++|.+.++||+|+||+||+|.++...+.    ..+..||||+++...  .......+.+|+.++++++|||||+++
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~----~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~   89 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKD----EPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLL   89 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETT----EEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccC----CCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeee
Confidence            34458899999999999999999998653211    112249999997553  233445678899999999999999999


Q ss_pred             EEEEeCCeEEEEEeeccCCchhhhhhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccC
Q 013016          156 AEFEASNFSCIVMEFCSGGDLHSLRHKQ--------PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       156 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~  227 (451)
                      +++..++..++|||||++|+|.+++...        ....+++..+..++.||+.||.|||+++|+||||||+|||++.+
T Consensus        90 ~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~  169 (308)
T d1p4oa_          90 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  169 (308)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT
T ss_pred             eEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC
Confidence            9999999999999999999999987643        12347899999999999999999999999999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      +++||+|||+++.....                                                     ..........
T Consensus       170 ~~~Kl~DFGla~~~~~~-----------------------------------------------------~~~~~~~~~~  196 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYET-----------------------------------------------------DYYRKGGKGL  196 (308)
T ss_dssp             CCEEECCTTCCCGGGGG-----------------------------------------------------GCEEGGGSSE
T ss_pred             ceEEEeecccceeccCC-----------------------------------------------------cceeecccee
Confidence            99999999998532210                                                     0111222347


Q ss_pred             cCCCccCcccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhc
Q 013016          308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLL  386 (451)
Q Consensus       308 gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L  386 (451)
                      ||+.|+|||.+.+..++.++|||||||++|||+|| +.||.+.+..+.+..+.++......    ...+..+.+||.+||
T Consensus       197 ~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl  272 (308)
T d1p4oa_         197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCW  272 (308)
T ss_dssp             ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHT
T ss_pred             cccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCc----ccchHHHHHHHHHHc
Confidence            89999999999999999999999999999999997 5889998888888888876532211    223348999999999


Q ss_pred             ccCcCCcCCCCCChHHHHc------CCCcCCCC
Q 013016          387 NKDPCNRLGSKRGAADVKT------HPFFKGLN  413 (451)
Q Consensus       387 ~~dP~~Rpt~~~~~~ell~------hp~~~~~~  413 (451)
                      +.||.+|||    +.+|++      +|+|++++
T Consensus       273 ~~~P~~RPs----~~~il~~L~~~~~~~~~~~~  301 (308)
T d1p4oa_         273 QYNPKMRPS----FLEIISSIKEEMEPGFREVS  301 (308)
T ss_dssp             CSSGGGSCC----HHHHHHHHGGGSCTTHHHHC
T ss_pred             CCChhHCcC----HHHHHHHHHHhcCCCCcCCC
Confidence            999999999    999987      77776543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-50  Score=390.48  Aligned_cols=264  Identities=17%  Similarity=0.284  Sum_probs=214.4

Q ss_pred             CcccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHC-CCCCccce
Q 013016           76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKML-DHPFLPTL  154 (451)
Q Consensus        76 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~nIv~l  154 (451)
                      .+..++|++.++||+|+||.||+|+++...+    ...+..||||++.....  ......+.+|+.+++++ +|||||++
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~----~~~~~~vAvK~i~~~~~--~~~~~~~~~E~~~~~~l~~HpnIv~~   92 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIK----SDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNL   92 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSS----TTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCCHHHeEEeeEEeecCCeEEEEEEEecccc----CCCCeEEEEEEECcccC--HHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            3444789999999999999999999865432    23445799999976532  23345677899999998 69999999


Q ss_pred             eEEEEeCCeEEEEEeeccCCchhhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 013016          155 YAEFEASNFSCIVMEFCSGGDLHSLRHKQP----------------HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLK  218 (451)
Q Consensus       155 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlk  218 (451)
                      ++++.+.+.++||||||+||+|.+++....                ...+++..+..++.||+.||+|||++|+||||||
T Consensus        93 ~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLK  172 (311)
T d1t46a_          93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (311)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccc
Confidence            999999999999999999999999987643                2358999999999999999999999999999999


Q ss_pred             CCcEEEccCCCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccc
Q 013016          219 PENVLVRSDGHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP  298 (451)
Q Consensus       219 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (451)
                      |+|||++.++.+||+|||+++......                                                     
T Consensus       173 p~NIl~~~~~~~ki~DfG~~~~~~~~~-----------------------------------------------------  199 (311)
T d1t46a_         173 ARNILLTHGRITKICDFGLARDIKNDS-----------------------------------------------------  199 (311)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCT-----------------------------------------------------
T ss_pred             cccccccccCcccccccchheeccCCC-----------------------------------------------------
Confidence            999999999999999999985332110                                                     


Q ss_pred             ccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCCCCCCCCcChHH
Q 013016          299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH  377 (451)
Q Consensus       299 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  377 (451)
                      ........+||+.|+|||++.+..++.++|||||||++|||+| |.+||...+..+.+.+++........   +...+.+
T Consensus       200 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~  276 (311)
T d1t46a_         200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS---PEHAPAE  276 (311)
T ss_dssp             TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC---CTTSCHH
T ss_pred             cceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC---cccccHH
Confidence            1111223589999999999999999999999999999999998 77778777777766666654332221   1223448


Q ss_pred             HHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          378 ARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       378 ~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      +.+||.+||+.||.+|||    +.||++
T Consensus       277 l~~Li~~cl~~dP~~RPs----~~~il~  300 (311)
T d1t46a_         277 MYDIMKTCWDADPLKRPT----FKQIVQ  300 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHHHcCCChhHCcC----HHHHHH
Confidence            999999999999999999    999885

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-48  Score=376.45  Aligned_cols=256  Identities=15%  Similarity=0.197  Sum_probs=201.1

Q ss_pred             eEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEEe-C
Q 013016           83 DLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFEA-S  161 (451)
Q Consensus        83 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~~-~  161 (451)
                      .+.++||+|+||+||+|++..+..      ....||||++++.  ........+.+|++++++++|||||++++++.. +
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~------~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~  101 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE  101 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----------CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETT
T ss_pred             ccceEEeecCCeEEEEEEEECCCC------EEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecC
Confidence            346789999999999999875432      1235899998743  234455778899999999999999999999875 5


Q ss_pred             CeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEccCCCEEEeccCccccc
Q 013016          162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCS  241 (451)
Q Consensus       162 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  241 (451)
                      +..++|||||++|+|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||+++++.+||+|||+++..
T Consensus       102 ~~~~lv~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~  180 (311)
T d1r0pa_         102 GSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM  180 (311)
T ss_dssp             TEEEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCT
T ss_pred             CceEEEEEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhc
Confidence            6899999999999999988765 345788999999999999999999999999999999999999999999999998644


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCcccccCC
Q 013016          242 NAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG  321 (451)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  321 (451)
                      .......                                                   ........||+.|+|||.+.+.
T Consensus       181 ~~~~~~~---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~  209 (311)
T d1r0pa_         181 YDKEFDS---------------------------------------------------VHNKTGAKLPVKWMALESLQTQ  209 (311)
T ss_dssp             TTTTCCC---------------------------------------------------TTCTTCSSCCGGGSCHHHHHHC
T ss_pred             ccccccc---------------------------------------------------ceecccccccccccChHHHhcC
Confidence            3211100                                                   0111123689999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCCh
Q 013016          322 SHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGA  400 (451)
Q Consensus       322 ~~~~~~DIwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~  400 (451)
                      .++.++||||||+++|||+||..||... +..+....+..+.....    +...+.++.+||.+||+.||++||+    +
T Consensus       210 ~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~----p~~~~~~l~~li~~cl~~dP~~RPs----~  281 (311)
T d1r0pa_         210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLYEVMLKCWHPKAEMRPS----F  281 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC----H
T ss_pred             CCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC----cccCcHHHHHHHHHHcCCCHhHCcC----H
Confidence            9999999999999999999977777653 34445555555543221    1233458999999999999999999    9


Q ss_pred             HHHHcC
Q 013016          401 ADVKTH  406 (451)
Q Consensus       401 ~ell~h  406 (451)
                      .||++|
T Consensus       282 ~ei~~~  287 (311)
T d1r0pa_         282 SELVSR  287 (311)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-48  Score=372.13  Aligned_cols=253  Identities=22%  Similarity=0.277  Sum_probs=190.4

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCccceeEEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLPTLYAEFE  159 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv~l~~~~~  159 (451)
                      ++|.+.++||+|+||+||+|++.+.           .||||++.....    .....+.|+..+.+++|||||++++++.
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~-----------~vAvK~~~~~~~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~   67 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGE-----------EVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTE-----------EEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCE-----------EEEEEEECccch----hHHHHHHHHHHHhhCCCCcCcceEEEEE
Confidence            5799999999999999999987543           399999975422    1222334556667789999999999997


Q ss_pred             eCC----eEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeeccCCCCcEEEccC
Q 013016          160 ASN----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM--------LGIIYRDLKPENVLVRSD  227 (451)
Q Consensus       160 ~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~--------~givH~Dlkp~NIll~~~  227 (451)
                      ..+    .+|+|||||++|+|.+++++.   .+++..+..++.|++.||+|||+        +||+||||||+||||+.+
T Consensus        68 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~  144 (303)
T d1vjya_          68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             EECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred             eCCCcceEEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC
Confidence            654    689999999999999999874   48999999999999999999996        599999999999999999


Q ss_pred             CCEEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccc
Q 013016          228 GHIMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV  307 (451)
Q Consensus       228 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (451)
                      |.+||+|||++........                                                   .........+
T Consensus       145 ~~~Kl~DFGl~~~~~~~~~---------------------------------------------------~~~~~~~~~~  173 (303)
T d1vjya_         145 GTCCIADLGLAVRHDSATD---------------------------------------------------TIDIAPNHRV  173 (303)
T ss_dssp             SCEEECCCTTCEEEETTTT---------------------------------------------------EECC----CC
T ss_pred             CCeEEEecCccccccCCCc---------------------------------------------------ceecccccee
Confidence            9999999999853321100                                                   0011122358


Q ss_pred             cCCCccCcccccCCC------CCcchhHHHHHHHHHHHHhCCCCCCCC---------------ChHHHHHHHhcCCCC--
Q 013016          308 GTHEYVSPEVASGGS------HGNAVDWWAFGIFIYEMIYGRTPFAAP---------------SNETTLRNIVKKPLT--  364 (451)
Q Consensus       308 gt~~y~aPE~~~~~~------~~~~~DIwSlG~il~elltg~~pf~~~---------------~~~~~~~~i~~~~~~--  364 (451)
                      ||+.|||||++.+..      ++.++|||||||+||||+||..||...               ........+......  
T Consensus       174 gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  253 (303)
T d1vjya_         174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN  253 (303)
T ss_dssp             SCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC
T ss_pred             cccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCC
Confidence            999999999987643      567899999999999999998877431               112222233222221  


Q ss_pred             CCCCCCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHc
Q 013016          365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKT  405 (451)
Q Consensus       365 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~  405 (451)
                      ++...........+.+|+.+||+.||++|||    +.||++
T Consensus       254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ei~~  290 (303)
T d1vjya_         254 IPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK  290 (303)
T ss_dssp             CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred             CCcccCChHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence            1211111112235889999999999999999    999876

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-47  Score=365.14  Aligned_cols=266  Identities=20%  Similarity=0.272  Sum_probs=197.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCC-ccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPF-LPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-Iv~l~~~~  158 (451)
                      ++|++.++||+|+||+||+|+++.+++         .||||++....     ....+..|+++++.++|+| |+.+.+++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~---------~vAvK~~~~~~-----~~~~~~~E~~i~~~l~~~~~i~~~~~~~   72 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGE---------EVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCG   72 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTE---------EEEEEEEESCT-----TSCCHHHHHHHHHHSTTSTTCCCEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCC---------EEEEEEEchhc-----cCHHHHHHHHHHHHccCCCcccEEEEEE
Confidence            569999999999999999999887665         49999987542     2234667999999998776 55556666


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc---CCCEEEecc
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDF  235 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~---~~~~kl~Df  235 (451)
                      .+.+..++||||+ +++|.+.+... ...+++..+..++.||+.||+|||++||+||||||+|||++.   +..+||+||
T Consensus        73 ~~~~~~~ivme~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DF  150 (299)
T d1ckia_          73 AEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF  150 (299)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             ecCCEEEEEEEEc-CCchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeecc
Confidence            8888999999999 77777766544 356999999999999999999999999999999999999863   457999999


Q ss_pred             CcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCccCc
Q 013016          236 DLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP  315 (451)
Q Consensus       236 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  315 (451)
                      |+|+..........                                                ........++||+.||||
T Consensus       151 G~a~~~~~~~~~~~------------------------------------------------~~~~~~~~~~gt~~y~aP  182 (299)
T d1ckia_         151 GLAKKYRDARTHQH------------------------------------------------IPYRENKNLTGTARYASI  182 (299)
T ss_dssp             SSCEECBCTTTCCB------------------------------------------------CCCCBCCSCCCCSSSCCH
T ss_pred             Ccceeccccccccc------------------------------------------------eeccccCCcCCCccccCH
Confidence            99864432111000                                                001122346899999999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCCCCCCCCCCCCcChHHHHHHHHHhcccCcCC
Q 013016          316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI---VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN  392 (451)
Q Consensus       316 E~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  392 (451)
                      |++.+..++.++|||||||++|||++|+.||...........+   .......+........+.++.+|+.+||+.||++
T Consensus       183 E~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~  262 (299)
T d1ckia_         183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD  262 (299)
T ss_dssp             HHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTC
T ss_pred             HHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhH
Confidence            9999999999999999999999999999999876554432222   1111111111111123348999999999999999


Q ss_pred             cCCCCCChHHHHcCCCcC
Q 013016          393 RLGSKRGAADVKTHPFFK  410 (451)
Q Consensus       393 Rpt~~~~~~ell~hp~~~  410 (451)
                      ||++.. +.++|+|+|.+
T Consensus       263 RP~~~~-i~~~l~~~~~~  279 (299)
T d1ckia_         263 KPDYSY-LRQLFRNLFHR  279 (299)
T ss_dssp             CCCHHH-HHHHHHHHHHH
T ss_pred             CcCHHH-HHHHHHHHHHH
Confidence            999221 23557777654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5.5e-47  Score=361.90  Aligned_cols=257  Identities=18%  Similarity=0.242  Sum_probs=200.2

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC-CCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH-PFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~nIv~l~~~~  158 (451)
                      ++|++.++||+|+||+||+|++..+++         .||||++....     ....+..|+++++.+.| +||+.+++++
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~---------~vAvK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~   70 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQ---------QVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFG   70 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTE---------EEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCC---------EEEEEEEcccc-----CcHHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence            689999999999999999999887665         49999986542     12345568899999975 8999999999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc-----CCCEEEe
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS-----DGHIMLS  233 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~-----~~~~kl~  233 (451)
                      ....+.|+||||+ +++|.+++... ...+++..+..++.|++.||+|||++||+||||||+|||++.     ++.+||+
T Consensus        71 ~~~~~~~~vme~~-~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~  148 (293)
T d1csna_          71 QEGLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV  148 (293)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             ecCCccEEEEEec-CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEc
Confidence            9999999999999 89999988765 346999999999999999999999999999999999999974     5789999


Q ss_pred             ccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCcccccccccccccccccCCCcc
Q 013016          234 DFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV  313 (451)
Q Consensus       234 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  313 (451)
                      |||+|+..........                                                ........++||+.||
T Consensus       149 DFG~a~~~~~~~~~~~------------------------------------------------~~~~~~~~~~GT~~y~  180 (293)
T d1csna_         149 DFGMVKFYRDPVTKQH------------------------------------------------IPYREKKNLSGTARYM  180 (293)
T ss_dssp             CCTTCEESBCTTTCCB------------------------------------------------CCCCCCCCCCSCTTTC
T ss_pred             ccceeEEcccCccccc------------------------------------------------eeecccCceEEchhhc
Confidence            9999965432111000                                                0011223468999999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHhcCCCCCCCCCCCCcChHHHHHHHHHhcccCc
Q 013016          314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS---NETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDP  390 (451)
Q Consensus       314 aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  390 (451)
                      |||++.+..++.++|||||||++|||++|+.||.+..   .......+.......+........+.++.+++..|+..+|
T Consensus       181 aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~  260 (293)
T d1csna_         181 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAF  260 (293)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCT
T ss_pred             CHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCc
Confidence            9999999999999999999999999999999997643   2333333332221111111111123489999999999999


Q ss_pred             CCcCCCCCChHHHH
Q 013016          391 CNRLGSKRGAADVK  404 (451)
Q Consensus       391 ~~Rpt~~~~~~ell  404 (451)
                      ++||+    .+.+.
T Consensus       261 ~~rP~----y~~l~  270 (293)
T d1csna_         261 DATPD----YDYLQ  270 (293)
T ss_dssp             TCCCC----HHHHH
T ss_pred             ccCcC----HHHHH
Confidence            99998    55543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-45  Score=361.53  Aligned_cols=259  Identities=28%  Similarity=0.406  Sum_probs=192.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-----------C
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-----------H  148 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h  148 (451)
                      ++|+++++||+|+||+||+|+++.+++         .||||++++....    .+.+.+|+.+++.++           |
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~---------~vAvKvi~~~~~~----~~~~~~Ei~~l~~l~~~~~~~~~~~~~   79 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNT---------HVAMKIVRGDKVY----TEAAEDEIKLLQRVNDADNTKEDSMGA   79 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE---------EEEEEEECSCHHH----HHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCC---------EEEEEEEeccccc----hHHHHHHHHHHHHhcchhhhhhhhcCc
Confidence            359999999999999999999887765         4999999865322    244556888887764           5


Q ss_pred             CCccceeEEEEeC--CeEEEEEeeccCCc-hhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEE
Q 013016          149 PFLPTLYAEFEAS--NFSCIVMEFCSGGD-LHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-LGIIYRDLKPENVLV  224 (451)
Q Consensus       149 ~nIv~l~~~~~~~--~~~~lV~E~~~ggs-L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givH~Dlkp~NIll  224 (451)
                      +||+++++++...  ...++||+++..+. ............+++..++.++.||+.||+|||+ .||+||||||+|||+
T Consensus        80 ~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll  159 (362)
T d1q8ya_          80 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM  159 (362)
T ss_dssp             TTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred             CceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeee
Confidence            7899999988643  46666666664443 3444555556779999999999999999999997 899999999999999


Q ss_pred             ccCCC------EEEeccCcccccCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhhccccCCccccccCCCccccccc
Q 013016          225 RSDGH------IMLSDFDLSLCSNAIPAVESPASSPEAASPRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEP  298 (451)
Q Consensus       225 ~~~~~------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (451)
                      +.++.      ++++|||.+.....                                                       
T Consensus       160 ~~~~~~~~~~~~kl~dfg~s~~~~~-------------------------------------------------------  184 (362)
T d1q8ya_         160 EIVDSPENLIQIKIADLGNACWYDE-------------------------------------------------------  184 (362)
T ss_dssp             EEEETTTTEEEEEECCCTTCEETTB-------------------------------------------------------
T ss_pred             eccCcccccceeeEeeccccccccc-------------------------------------------------------
Confidence            87653      99999999743211                                                       


Q ss_pred             ccccccccccCCCccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcC--C--------
Q 013016          299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE------TTLRNIVKK--P--------  362 (451)
Q Consensus       299 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~elltg~~pf~~~~~~------~~~~~i~~~--~--------  362 (451)
                         .....+||+.|+|||++.+..++.++||||+||++++|++|+.||......      ..+......  .        
T Consensus       185 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~  261 (362)
T d1q8ya_         185 ---HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN  261 (362)
T ss_dssp             ---CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             ---ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhc
Confidence               111347999999999999999999999999999999999999999754321      111111110  0        


Q ss_pred             ----------C----CCCCC-------------CCCCcChHHHHHHHHHhcccCcCCcCCCCCChHHHHcCCCcCCCC
Q 013016          363 ----------L----TFPTQ-------------SPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN  413 (451)
Q Consensus       363 ----------~----~~~~~-------------~~~~~~~~~~~~ll~~~L~~dP~~Rpt~~~~~~ell~hp~~~~~~  413 (451)
                                .    .....             ......+.++.+||.+||.+||.+|||    ++|||+||||++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpt----a~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         262 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDTL  335 (362)
T ss_dssp             CTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTCT
T ss_pred             ccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcC----HHHHhcCcccCCCC
Confidence                      0    00000             001112347899999999999999999    99999999999744

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=3.4e-26  Score=203.23  Aligned_cols=134  Identities=21%  Similarity=0.240  Sum_probs=104.3

Q ss_pred             ceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHH---------------HHHHHHHHHHHHHHHHHC
Q 013016           82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLE---------------KKKKVHRAEMEKKILKML  146 (451)
Q Consensus        82 y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------~~~~~~~~~~e~~~l~~l  146 (451)
                      +.+.++||+|+||+||+|.+..+.          .||||+++.....               ..........|...+.++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~----------~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l   71 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFG----------ECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL   71 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTE----------EEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             chhCCEeeeCcceEEEEEECCCCC----------EEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            467899999999999999876433          3999987532211               011223345688899999


Q ss_pred             CCCCccceeEEEEeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEcc
Q 013016          147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS  226 (451)
Q Consensus       147 ~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH~Dlkp~NIll~~  226 (451)
                      .|.+++..+++..    .++||||+++..+.+         ++...+..++.||+.||+|||++||+||||||+|||++.
T Consensus        72 ~~~~v~~~~~~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~  138 (191)
T d1zara2          72 QGLAVPKVYAWEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE  138 (191)
T ss_dssp             TTSSSCCEEEEET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET
T ss_pred             cCCCcceEEEecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC
Confidence            9999999886532    379999998766543         445556789999999999999999999999999999996


Q ss_pred             CCCEEEeccCccc
Q 013016          227 DGHIMLSDFDLSL  239 (451)
Q Consensus       227 ~~~~kl~Dfg~a~  239 (451)
                      + .++|+|||+|.
T Consensus       139 ~-~~~liDFG~a~  150 (191)
T d1zara2         139 E-GIWIIDFPQSV  150 (191)
T ss_dssp             T-EEEECCCTTCE
T ss_pred             C-CEEEEECCCcc
Confidence            5 58999999984

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.73  E-value=2.3e-08  Score=90.87  Aligned_cols=139  Identities=15%  Similarity=0.107  Sum_probs=95.9

Q ss_pred             CCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeEEE
Q 013016           80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYAEF  158 (451)
Q Consensus        80 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~~~  158 (451)
                      ..|++.+..+-++.+.||+....+..           ++||+......   .....+..|...++.+. +--+.+++.++
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~~~~-----------~vlk~~~~~~~---~~~~~~~~E~~~l~~l~~~vpvP~vl~~~   79 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGENEN-----------LYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFE   79 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECSSCE-----------EEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEeCCCe-----------EEEEEcCCCcc---cchhhHHHHHHHHHHHhccCCCCcEEEEE
Confidence            67888877665666799988643332           78898865422   12234556888887764 44478889999


Q ss_pred             EeCCeEEEEEeeccCCchhhhhhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------
Q 013016          159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHM-----------------------------  209 (451)
Q Consensus       159 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-----------------------------  209 (451)
                      ..++..++||++++|.++.+.....       .....++.++...|..||+                             
T Consensus        80 ~~~~~~~lv~~~l~G~~~~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (263)
T d1j7la_          80 RHDGWSNLLMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD  152 (263)
T ss_dssp             EETTEEEEEEECCSSEEHHHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred             ecCCceEEEEEeccccccccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhh
Confidence            9999999999999998876543211       1123344555555555553                             


Q ss_pred             ------------------------------CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 ------------------------------LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ------------------------------~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                                                    ..++|+|+.|.|||+++++.+-|+||+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             hhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                                          127999999999999876666799999874

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.31  E-value=8.5e-07  Score=79.68  Aligned_cols=75  Identities=15%  Similarity=0.065  Sum_probs=52.1

Q ss_pred             eccCC-eeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCC--CCccceeEEEEeCCeE
Q 013016           88 IGAGD-IGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDH--PFLPTLYAEFEASNFS  164 (451)
Q Consensus        88 LG~G~-~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~nIv~l~~~~~~~~~~  164 (451)
                      +..|. -+.||+........          +++|+.....      ...+..|...++.+..  -.+++++.+..+++..
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~----------~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~   81 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPV----------LFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD   81 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCC----------EEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE
T ss_pred             cCCcccCCeEEEEEeCCCCE----------EEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccce
Confidence            44454 36899987655432          8889876442      2335557777776643  3367889888888899


Q ss_pred             EEEEeeccCCchhh
Q 013016          165 CIVMEFCSGGDLHS  178 (451)
Q Consensus       165 ~lV~E~~~ggsL~~  178 (451)
                      ++||++++|.++.+
T Consensus        82 ~~v~~~i~G~~~~~   95 (255)
T d1nd4a_          82 WLLLGEVPGQDLLS   95 (255)
T ss_dssp             EEEEECCSSEETTT
T ss_pred             EEEEEeeecccccc
Confidence            99999998877643

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.06  E-value=4.8e-06  Score=79.94  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=48.7

Q ss_pred             EeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHH----HHHHHHHHHHHHHHHHCC-C--CCccceeEE
Q 013016           85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEK----KKKVHRAEMEKKILKMLD-H--PFLPTLYAE  157 (451)
Q Consensus        85 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~-h--~nIv~l~~~  157 (451)
                      .+.||.|....||++.+..+++.         ++||.-.......    .....+...|.+.|+.+. +  ..+++++.+
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~s---------vivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  101 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRA---------LIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS  101 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CE---------EEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeE---------EEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE
Confidence            55789999999999987665543         8888654221111    012234455777776652 2  346677754


Q ss_pred             EEeCCeEEEEEeeccCCch
Q 013016          158 FEASNFSCIVMEFCSGGDL  176 (451)
Q Consensus       158 ~~~~~~~~lV~E~~~ggsL  176 (451)
                        +.+..++|||++.+..+
T Consensus       102 --d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1         102 --DTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             --ETTTTEEEECCCTTSEE
T ss_pred             --cCCCCEEEEeccCCccc
Confidence              44556899999976543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.47  E-value=0.00014  Score=69.43  Aligned_cols=88  Identities=20%  Similarity=0.315  Sum_probs=54.4

Q ss_pred             ccCCceEEeeeccCCeeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCC-CCCccceeE
Q 013016           78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLD-HPFLPTLYA  156 (451)
Q Consensus        78 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~nIv~l~~  156 (451)
                      ..+++.+ +.|+.|-.-.+|++.........+.  ...-|.+++.....     ......+|..+++.+. +.-.+++++
T Consensus        41 ~~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~--~~~~vllRi~g~~~-----~~idr~~E~~i~~~ls~~gl~Pkll~  112 (395)
T d1nw1a_          41 PLEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRN--EPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLGPKLYG  112 (395)
T ss_dssp             CGGGEEE-EEECCCTTEEEEEEEECTTSCCSSS--CCSEEEEEEECSCC-----CHHHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred             CccceEE-EEcCCccccceEEEEeCCCCccccC--CCCcEEEEecCCcc-----hhhHHHHHHHHHHHHHhCCCCCeEEE
Confidence            3345555 5788899999999987654321111  11236777765221     1223456888888775 433568888


Q ss_pred             EEEeCCeEEEEEeeccCCchh
Q 013016          157 EFEASNFSCIVMEFCSGGDLH  177 (451)
Q Consensus       157 ~~~~~~~~~lV~E~~~ggsL~  177 (451)
                      ++.+    .+||||++|.+|.
T Consensus       113 ~~~~----g~I~efi~g~~l~  129 (395)
T d1nw1a_         113 IFSG----GRLEEYIPSRPLS  129 (395)
T ss_dssp             EETT----EEEECCCCEEECC
T ss_pred             EcCC----ceEEEEeccccCC
Confidence            7753    5899999886653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00031  Score=65.03  Aligned_cols=70  Identities=16%  Similarity=0.185  Sum_probs=43.3

Q ss_pred             eeEEEEEEeccccccCCCCCCcceEEEEEcchHHHHHHHHHHHHHHHHHHHHHCCCCCcc--cee-----EEEEeCCeEE
Q 013016           93 IGTVYLCSLNNKYRQDRGHEPCCLYAMKVVNKEVLEKKKKVHRAEMEKKILKMLDHPFLP--TLY-----AEFEASNFSC  165 (451)
Q Consensus        93 ~g~Vy~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~nIv--~l~-----~~~~~~~~~~  165 (451)
                      --.||++...++.+          |++|+.+.....    ...+..|...+..|...+|.  ..+     ..+...+..+
T Consensus        35 EN~vy~v~~~dg~~----------~VlK~~rp~~~s----~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~  100 (325)
T d1zyla1          35 ENRVYQFQDEDRRR----------FVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYF  100 (325)
T ss_dssp             SSEEEEECCTTCCC----------EEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEE
T ss_pred             cceeEEEEcCCCCE----------EEEEEeCCCCCC----HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEE
Confidence            36899998765543          999998754322    23344577777766432221  111     2335567889


Q ss_pred             EEEeeccCCch
Q 013016          166 IVMEFCSGGDL  176 (451)
Q Consensus       166 lV~E~~~ggsL  176 (451)
                      .+++++.|..+
T Consensus       101 ~l~~~~~G~~~  111 (325)
T d1zyla1         101 AVFPSVGGRQF  111 (325)
T ss_dssp             EEEECCCCEEC
T ss_pred             EEEeecCCcCC
Confidence            99999977544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.05  E-value=0.00032  Score=64.47  Aligned_cols=30  Identities=33%  Similarity=0.384  Sum_probs=27.0

Q ss_pred             CCCeeccCCCCcEEEccCCCEEEeccCccc
Q 013016          210 LGIIYRDLKPENVLVRSDGHIMLSDFDLSL  239 (451)
Q Consensus       210 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~  239 (451)
                      .|+||+|+.++||+++.+...-|+||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            579999999999999988777899999984