Citrus Sinensis ID: 013145

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
MDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
ccccccccccHHHHHHHHcccccHHHHHccccccccccEEEEEEEEEEEEEHHHHHcccHHHHHHHccccccccccEEEEEEccccHHHHHHHHHcccccEEEEcccccHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEcccccccEEEEEccccEEEEEEEEccEEEEEEccccccccccEEEEcccccccccccEEEEEEEEEEEEccccccccccccccEEEcccccccccccccccccEEEEccccEEEccEEEEEEEEEEcc
ccccccccccccccHHHHcHHHHHHHHHHHcccccccEEEEEEEEEEEcccHEEEEcccHHHHHHHcccccHccccEEEEEEccccHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHcHHcccccccccccEEEEcccEEccEEEEEEEcccccEEEEcccccccccEEEEcEEEEEEEEEEcccccEEEEcccccccccccEEEEEEEEcccccEEEEEEEEEEEEccccccEEEcccccEEEccccEccccccccccHHHHHcccccHHEccEEEEEEEEEEcc
mddcvgcenQDEEVEAMiegspsgdeaangnesswsmdcsTVVRVKTLhisspilaakspfFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYsntlsttaaPALLDVLMAADKFEVASCMRYCSRllrnmpmtpeSALLYLelpssvlmgeavqPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAIlssddlqiasEDAVYDFVLKWARAQYPRVEERREVLGSRLARfirfphmtcRKLKKvltcndfdhDVASKLVLEALFFkaeaphrqrtlaaeESVTLNRRFVEraykyrpvkvveferprqqCVVYLDLKreecenlfpsgrvysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYefaarskpteefvskykgnytftggkavgyrnlfaipwtsfmaddsLYFINGILHLRAELTIRH
mddcvgceNQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARaqyprveerrEVLGsrlarfirfphmtCRKLKKVLTCNDFDHDVASKLVLEALFFKAeaphrqrtlaaeesvtlnrrfveraykyrpvkvveferprqQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAarskpteefvskyKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
MDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
***********************************SMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGM*****RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELT***
**********************************WSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFF***************************YKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR*
*********QDEEVEAMIEG*************SWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
**********DEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
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MDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query449 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 0.997 0.798 0.846 0.0
O82343561 BTB/POZ domain-containing no no 0.995 0.796 0.841 0.0
O04615527 BTB/POZ domain-containing no no 0.982 0.836 0.609 1e-153
Q8NFY9 601 Kelch repeat and BTB doma yes no 0.432 0.322 0.278 3e-12
B1H285 575 Kelch repeat and BTB doma yes no 0.414 0.323 0.28 6e-12
Q3UQV5 599 Kelch repeat and BTB doma yes no 0.432 0.323 0.274 9e-12
Q8K430 640 Kelch-like protein 17 OS= no no 0.425 0.298 0.291 2e-11
Q6TDP3 640 Kelch-like protein 17 OS= no no 0.425 0.298 0.291 2e-11
Q6TDP4 642 Kelch-like protein 17 OS= no no 0.425 0.297 0.291 2e-11
O94889 574 Kelch-like protein 18 OS= no no 0.398 0.311 0.288 4e-11
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/449 (84%), Positives = 414/449 (92%), Gaps = 1/449 (0%)

Query: 1   MDDCVGCENQDEEV-EAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKS 59
           MD C G EN D+E  EAM+E + SGDE    +E +W MDCSTVVRVK LHISSPILAAKS
Sbjct: 108 MDGCPGGENPDDEGGEAMVEEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKS 167

Query: 60  PFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADK 119
           PFFYKLFSNGM+ESEQRHV LRINASEEAALMELLNFMYSN +S T APALLDVLMAADK
Sbjct: 168 PFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADK 227

Query: 120 FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTK 179
           FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLM +AVQPLTDAA+Q+LA+RYKD+TK
Sbjct: 228 FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITK 287

Query: 180 FQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFI 239
           F +EVM+LPLAG+EAILSSD+LQIASEDAVYDF+LKWARAQYP +EERRE+LGSRLA  I
Sbjct: 288 FHEEVMSLPLAGIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSI 347

Query: 240 RFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVER 299
           RFP MTCRKLKKVLTC+DF+H++ASKLVLEALFFKAEAPHRQR+LA+EES +LNRR +ER
Sbjct: 348 RFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIER 407

Query: 300 AYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMD 359
           AYKYRPVKVVEFE PR QCVVYLDLKREEC  LFPSGRVYSQAFHLGGQGFFLSAHCNMD
Sbjct: 408 AYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMD 467

Query: 360 QQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLF 419
           QQSSFHCFGLFLGMQEKGSVSF VDYEF+ARSKP E+F+SKYKGNYTFTGGKAVGYRNLF
Sbjct: 468 QQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLF 527

Query: 420 AIPWTSFMADDSLYFINGILHLRAELTIR 448
            +PWTSF+A+DS YFINGILHLRAELTI+
Sbjct: 528 GVPWTSFIAEDSQYFINGILHLRAELTIK 556
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q8K430|KLH17_RAT Kelch-like protein 17 OS=Rattus norvegicus GN=Klhl17 PE=1 SV=1 Back     alignment and function description
>sp|Q6TDP3|KLH17_MOUSE Kelch-like protein 17 OS=Mus musculus GN=Klhl17 PE=2 SV=1 Back     alignment and function description
>sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1 Back     alignment and function description
>sp|O94889|KLH18_HUMAN Kelch-like protein 18 OS=Homo sapiens GN=KLHL18 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query449
224064139 556 predicted protein [Populus trichocarpa] 1.0 0.807 0.919 0.0
255541774549 atpob1, putative [Ricinus communis] gi|2 1.0 0.817 0.913 0.0
224127832547 predicted protein [Populus trichocarpa] 0.997 0.819 0.906 0.0
297745384501 unnamed protein product [Vitis vinifera] 1.0 0.896 0.886 0.0
225454420 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.811 0.886 0.0
356573187 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.810 0.888 0.0
356506034 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.810 0.886 0.0
449432076 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.811 0.886 0.0
307136357 552 ATPOB protein binding [Cucumis melo subs 0.995 0.809 0.884 0.0
356560627 553 PREDICTED: BTB/POZ domain-containing pro 0.986 0.801 0.892 0.0
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/449 (91%), Positives = 432/449 (96%)

Query: 1   MDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSP 60
           MDDCVGC+NQDEE EAM+EGSPSGDEAA+G ESSWSMDCSTVVRVKTLHISSPILAAKSP
Sbjct: 108 MDDCVGCDNQDEEAEAMVEGSPSGDEAADGTESSWSMDCSTVVRVKTLHISSPILAAKSP 167

Query: 61  FFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKF 120
           FFYKLFSNGM+ESEQRHV LRINASEEAALMELLNFMYSNTL+ + AP LLDVLMAADKF
Sbjct: 168 FFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLTASQAPQLLDVLMAADKF 227

Query: 121 EVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKF 180
           EVASCMRYCSR LRN+PM PESALLYLELPSSVLM EAVQPLTDAA+QYLA+RYKDMTKF
Sbjct: 228 EVASCMRYCSRQLRNLPMKPESALLYLELPSSVLMAEAVQPLTDAAKQYLAARYKDMTKF 287

Query: 181 QDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIR 240
           Q+EVMALPLAG+EAILSSDDLQ+ASEDAVYDFVLKWARAQYPR+EERREVLG+RLAR+IR
Sbjct: 288 QEEVMALPLAGIEAILSSDDLQVASEDAVYDFVLKWARAQYPRLEERREVLGARLARYIR 347

Query: 241 FPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERA 300
           FP+MTCRKLKKVLTC DF+HD ASKLVLEALFFK E PHRQRTLAAEES TLNRRFVERA
Sbjct: 348 FPYMTCRKLKKVLTCTDFEHDAASKLVLEALFFKGEPPHRQRTLAAEESATLNRRFVERA 407

Query: 301 YKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQ 360
           YKYRPVKVVEFE PRQQCVVYLDLKREEC NLFPSGRVYSQAFHLGGQGFFLSAHCNMDQ
Sbjct: 408 YKYRPVKVVEFELPRQQCVVYLDLKREECVNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQ 467

Query: 361 QSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFA 420
           QSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFA
Sbjct: 468 QSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFA 527

Query: 421 IPWTSFMADDSLYFINGILHLRAELTIRH 449
           IPWTSFMA+DS YFING+LHLRAELTIRH
Sbjct: 528 IPWTSFMAEDSPYFINGVLHLRAELTIRH 556

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297745384|emb|CBI40464.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|307136357|gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|356560627|ref|XP_003548592.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query449
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 0.997 0.798 0.846 3.7e-206
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 0.995 0.796 0.841 1.5e-202
UNIPROTKB|Q6TDP4 642 KLHL17 "Kelch-like protein 17" 0.494 0.345 0.280 3.3e-12
MGI|MGI:2678948 640 Klhl17 "kelch-like 17" [Mus mu 0.494 0.346 0.280 4.3e-12
RGD|708444 640 Klhl17 "kelch-like family memb 0.494 0.346 0.280 4.3e-12
MGI|MGI:2661430 599 Kbtbd8 "kelch repeat and BTB ( 0.432 0.323 0.278 2.3e-11
ZFIN|ZDB-GENE-050904-1 623 kbtbd12 "kelch repeat and BTB 0.492 0.354 0.270 1.1e-10
UNIPROTKB|O60662 606 KLHL41 "Kelch-like protein 41" 0.521 0.386 0.244 3e-10
FB|FBgn0037978 575 KLHL18 [Drosophila melanogaste 0.429 0.335 0.228 3.5e-10
UNIPROTKB|A4FV78 606 KBTBD10 "Uncharacterized prote 0.445 0.330 0.265 4.9e-10
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1994 (707.0 bits), Expect = 3.7e-206, P = 3.7e-206
 Identities = 380/449 (84%), Positives = 414/449 (92%)

Query:     1 MDDCVGCENQDEEV-EAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKS 59
             MD C G EN D+E  EAM+E + SGDE    +E +W MDCSTVVRVK LHISSPILAAKS
Sbjct:   108 MDGCPGGENPDDEGGEAMVEEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKS 167

Query:    60 PFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADK 119
             PFFYKLFSNGM+ESEQRHV LRINASEEAALMELLNFMYSN +S T APALLDVLMAADK
Sbjct:   168 PFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADK 227

Query:   120 FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTK 179
             FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLM +AVQPLTDAA+Q+LA+RYKD+TK
Sbjct:   228 FEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITK 287

Query:   180 FQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFI 239
             F +EVM+LPLAG+EAILSSD+LQIASEDAVYDF+LKWARAQYP +EERRE+LGSRLA  I
Sbjct:   288 FHEEVMSLPLAGIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSI 347

Query:   240 RFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVER 299
             RFP MTCRKLKKVLTC+DF+H++ASKLVLEALFFKAEAPHRQR+LA+EES +LNRR +ER
Sbjct:   348 RFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIER 407

Query:   300 AYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMD 359
             AYKYRPVKVVEFE PR QCVVYLDLKREEC  LFPSGRVYSQAFHLGGQGFFLSAHCNMD
Sbjct:   408 AYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMD 467

Query:   360 QQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLF 419
             QQSSFHCFGLFLGMQEKGSVSF VDYEF+ARSKP E+F+SKYKGNYTFTGGKAVGYRNLF
Sbjct:   468 QQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLF 527

Query:   420 AIPWTSFMADDSLYFINGILHLRAELTIR 448
              +PWTSF+A+DS YFINGILHLRAELTI+
Sbjct:   528 GVPWTSFIAEDSQYFINGILHLRAELTIK 556
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6TDP4 KLHL17 "Kelch-like protein 17" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2678948 Klhl17 "kelch-like 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708444 Klhl17 "kelch-like family member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2661430 Kbtbd8 "kelch repeat and BTB (POZ) domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050904-1 kbtbd12 "kelch repeat and BTB (POZ) domain containing 12" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O60662 KLHL41 "Kelch-like protein 41" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0037978 KLHL18 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A4FV78 KBTBD10 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FPW6POB1_ARATHNo assigned EC number0.84630.99770.7985yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query449
smart0022597 smart00225, BTB, Broad-Complex, Tramtrack and Bric 7e-13
smart00875101 smart00875, BACK, BTB And C-terminal Kelch 2e-10
pfam07707101 pfam07707, BACK, BTB And C-terminal Kelch 6e-10
pfam00651101 pfam00651, BTB, BTB/POZ domain 8e-08
PHA03098 534 PHA03098, PHA03098, kelch-like protein; Provisiona 3e-07
cd13342147 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) relate 3e-04
>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information 
 Score = 63.9 bits (156), Expect = 7e-13
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 38  DCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFM 97
           D + VV  K  H    +LAA SP+F  LFS+  KES++  +   ++         LLNF+
Sbjct: 1   DVTLVVGGKKFHAHKAVLAAHSPYFKALFSSDFKESDKSEI--YLDDVSPEDFRALLNFL 58

Query: 98  YSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 135
           Y+  L       + ++L  AD  ++   +  C   L  
Sbjct: 59  YTGKLDLPEEN-VEELLELADYLQIPGLVELCEEFLLK 95

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97
>gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain Back     alignment and domain information
>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional Back     alignment and domain information
>gnl|CDD|241496 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) related 4 protein (MTMR4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 449
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 100.0
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.93
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 99.87
PHA02713557 hypothetical protein; Provisional 99.81
KOG4682488 consensus Uncharacterized conserved protein, conta 99.8
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 99.76
KOG4591280 consensus Uncharacterized conserved protein, conta 99.75
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 99.75
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 99.67
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 99.62
PHA03098534 kelch-like protein; Provisional 99.6
KOG0783 1267 consensus Uncharacterized conserved protein, conta 99.53
PHA02790480 Kelch-like protein; Provisional 99.44
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.36
TIGR03547 346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.29
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.26
PLN02153341 epithiospecifier protein 99.21
PLN02153341 epithiospecifier protein 99.2
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.19
PLN02193470 nitrile-specifier protein 99.17
PRK14131 376 N-acetylneuraminic acid mutarotase; Provisional 99.13
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.1
PLN02193470 nitrile-specifier protein 99.02
KOG4693392 consensus Uncharacterized conserved protein, conta 98.85
PF1396450 Kelch_6: Kelch motif 98.62
KOG0511516 consensus Ankyrin repeat protein [General function 98.48
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.44
KOG4693 392 consensus Uncharacterized conserved protein, conta 98.35
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.27
KOG2838401 consensus Uncharacterized conserved protein, conta 98.03
KOG2838401 consensus Uncharacterized conserved protein, conta 97.88
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.83
KOG1230 521 consensus Protein containing repeated kelch motifs 97.74
KOG2716230 consensus Polymerase delta-interacting protein PDI 97.64
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.63
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.55
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 97.53
KOG1230 521 consensus Protein containing repeated kelch motifs 97.4
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 97.39
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 97.3
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 97.26
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 97.15
KOG3473112 consensus RNA polymerase II transcription elongati 97.13
smart0061247 Kelch Kelch domain. 96.91
COG3055 381 Uncharacterized protein conserved in bacteria [Fun 96.78
smart0061247 Kelch Kelch domain. 96.46
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 96.07
PF1385442 Kelch_5: Kelch motif 95.69
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 95.48
KOG1665302 consensus AFH1-interacting protein FIP2, contains 95.19
COG3055 381 Uncharacterized protein conserved in bacteria [Fun 94.78
PF1341549 Kelch_3: Galactose oxidase, central domain 94.31
KOG2714465 consensus SETA binding protein SB1 and related pro 94.29
PF0393162 Skp1_POZ: Skp1 family, tetramerisation domain; Int 93.44
PF1341549 Kelch_3: Galactose oxidase, central domain 93.34
KOG0511516 consensus Ankyrin repeat protein [General function 93.29
PF1396450 Kelch_6: Kelch motif 91.98
KOG4350 620 consensus Uncharacterized conserved protein, conta 91.54
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 88.89
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 88.39
KOG1778319 consensus CREB binding protein/P300 and related TA 87.83
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 86.71
COG5201158 SKP1 SCF ubiquitin ligase, SKP1 component [Posttra 86.0
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 83.81
KOG3840438 consensus Uncharaterized conserved protein, contai 82.5
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 81.85
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=5.7e-71  Score=566.33  Aligned_cols=379  Identities=22%  Similarity=0.371  Sum_probs=340.7

Q ss_pred             CCceeEEEEe--eeEEeeeeeecccCHHHHHhhcCCCCcCccceEEEecCCCCHHHHHHHhhhhccCeeecCCcchHHHH
Q 013145           36 SMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDV  113 (449)
Q Consensus        36 ~~~~Dv~l~~--~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~v~~~~f~~~l~yiYtg~i~~~~~~~v~~l  113 (449)
                      +.+|||++.+  ++|+|||+||||+||||++||+++++|+.+++|.|.  ++++.+++.+++|+|||++.++. +||++|
T Consensus        34 ~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~--~v~~~~l~~ll~y~Yt~~i~i~~-~nVq~l  110 (571)
T KOG4441|consen   34 GLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLE--GVDPETLELLLDYAYTGKLEISE-DNVQEL  110 (571)
T ss_pred             CCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEe--cCCHHHHHHHHHHhhcceEEech-HhHHHH
Confidence            5589999988  579999999999999999999999999999999999  89999999999999999999998 999999


Q ss_pred             HHHHhhcCChhHHHHHHHHhhcCCCChhhHHHHhhhcccccchhchHHHHHHHHHHHHHhhhhhhcccccccCCCHHHHH
Q 013145          114 LMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVE  193 (449)
Q Consensus       114 l~~A~~l~l~~L~~~c~~~l~~~~l~~~n~~~i~~~a~~~~~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~  193 (449)
                      |.+|++|||+.+++.|++||++ +++++||+.|..+|+.+    ++.+|.+.+..||.+||.++.+ +++|++|+.+++.
T Consensus       111 l~aA~~lQi~~v~~~C~~fL~~-~l~~~Nclgi~~~a~~~----~~~~L~~~a~~~i~~~F~~v~~-~eefl~L~~~~l~  184 (571)
T KOG4441|consen  111 LEAASLLQIPEVVDACCEFLES-QLDPSNCLGIRRFAELH----SCTELLEVADEYILQHFAEVSK-TEEFLLLSLEELI  184 (571)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHhc-cHHhhCCCHHHHH
Confidence            9999999999999999999999 89999999999999987    9999999999999999999999 9999999999999


Q ss_pred             hcccCCCccCCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhhcCCCCCCCHHHHHhhhccCCCC--chHHHHHHHHHH
Q 013145          194 AILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HDVASKLVLEAL  271 (449)
Q Consensus       194 ~lL~~d~L~v~~E~~v~~av~~Wi~~~~~~~~~r~~~~~~~ll~~vRf~~l~~~~L~~~~~~~~l~--~~~~~~~l~ea~  271 (449)
                      .+|++|+|+|.+|.+||+++++|++||   .+.|..++ ++|+++||||+|++.+|.+.+...+++  ++.|+.++.+|+
T Consensus       185 ~ll~~d~l~v~~E~~vf~a~~~Wv~~d---~~~R~~~~-~~ll~~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~  260 (571)
T KOG4441|consen  185 GLLSSDDLNVDSEEEVFEAAMRWVKHD---FEEREEHL-PALLEAVRLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAK  260 (571)
T ss_pred             hhccccCCCcCCHHHHHHHHHHHHhcC---HhhHHHHH-HHHHHhcCccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHH
Confidence            999999999999999999999999999   88899999 899999999999999999999999876  479999999999


Q ss_pred             hhhccCccccccccccccccccc-ceeeeeeeeecceEEEeeCCccCeEEEeecCCCceeeccC--CCceeeeeeeecCe
Q 013145          272 FFKAEAPHRQRTLAAEESVTLNR-RFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFP--SGRVYSQAFHLGGQ  348 (449)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~pr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~~r~~~~~~v~gg~  348 (449)
                      +||..| .+++.+++++++  || ...+.++++||...  ..++ .+.+++||+.++.|..+++  .+|..+++++++|+
T Consensus       261 ~~~~~~-~~~~~~~~~~t~--~r~~~~~~l~~vGG~~~--~~~~-~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~  334 (571)
T KOG4441|consen  261 KYHLLP-QRRPVMQSPRTR--PRRSVSGKLVAVGGYNR--QGQS-LRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGK  334 (571)
T ss_pred             HHhhCc-ccCccccCCCcc--cCcCCCCeEEEECCCCC--CCcc-cceeEEecCCcCcEeecCCCCcccccccEEEECCE
Confidence            999985 455678888887  57 45577888888632  1122 6889999999999999998  88999999999999


Q ss_pred             eEEeeccc-ccCCCCceEEEE----------------------eEecee-------ecCcceeeeeccceeeecC---Cc
Q 013145          349 GFFLSAHC-NMDQQSSFHCFG----------------------LFLGMQ-------EKGSVSFAVDYEFAARSKP---TE  395 (449)
Q Consensus       349 iy~iGG~~-~~~~~r~~~~~~----------------------~~~g~~-------~~~~~~~~v~~~~~e~ydp---~W  395 (449)
                      ||++||++ +....+++++||                      +++|.+       +...+++ |     |||||   +|
T Consensus       335 lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~s-v-----E~YDp~~~~W  408 (571)
T KOG4441|consen  335 LYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNS-V-----ECYDPVTNKW  408 (571)
T ss_pred             EEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEecccccccccc-E-----EEecCCCCcc
Confidence            99999999 644445555555                      444544       2335666 6     99999   99


Q ss_pred             ccccCCCcee------------EEecccccC---CCcceec-c----Ccee-------------eeCCeeEEEcCcc
Q 013145          396 EFVSKYKGNY------------TFTGGKAVG---YRNLFAI-P----WTSF-------------MADDSLYFINGIL  439 (449)
Q Consensus       396 ~~v~~m~~~r------------yv~GG~~~~---~~~ve~Y-p----W~~~-------------~~~~~iyv~GG~~  439 (449)
                      +.++||+.+|            |++||.++.   +++|||| |    |+.+             +++|+|||+||..
T Consensus       409 ~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~  485 (571)
T KOG4441|consen  409 TPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFD  485 (571)
T ss_pred             cccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCcc
Confidence            9999999988            999998765   7999999 9    9987             8999999999964

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG3840 consensus Uncharaterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query449
4ap2_A297 Crystal Structure Of The Human Klhl11-cul3 Complex 2e-05
3hqi_A312 Structures Of Spop-Substrate Complexes: Insights In 3e-05
4eoz_A145 Crystal Structure Of The Spop Btb Domain Complexed 6e-05
3i3n_A279 Crystal Structure Of The Btb-Back Domains Of Human 2e-04
2nn2_A133 Crystal Structure Of The Btb Domain From The LrfZBT 6e-04
2if5_A120 Structure Of The Poz Domain Of Human Lrf, A Master 8e-04
>pdb|4AP2|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 2.8a Resolution Length = 297 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 17/224 (7%)
Query: 54  ILAAKSPFFYKLFSNGMKESEQRHVALRINASEEA----ALMELLNFMYSNTLSTTAAPA 109
           +LAA + +F  L S    ES    V +R  +SE       +  ++ +MY+  +  +   +
Sbjct: 71  VLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTG-S 129
Query: 110 LLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQY 169
           + +VL  AD+F +     +C   L+          ++  L     + +      D  R+ 
Sbjct: 130 VHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH-SLAHMYTLSQLALKAADMIRRN 188
Query: 170 LASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERRE 229
                +D     +E   LP   +   LS  ++ + SE+ +++ VLKW +    R  E RE
Sbjct: 189 FHKVIQD-----EEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQ----RNAEERE 239
Query: 230 VLGSRLARFIRFPHMTCRKLKKVLTCNDF--DHDVASKLVLEAL 271
                L + +R   M    L + +       +++V  KLV +A+
Sbjct: 240 RYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAV 283
>pdb|3HQI|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases: SpopmathxBTB3-Box-Pucsbc1 Length = 312 Back     alignment and structure
>pdb|4EOZ|A Chain A, Crystal Structure Of The Spop Btb Domain Complexed With The Cul3 N- Terminal Domain Length = 145 Back     alignment and structure
>pdb|3I3N|A Chain A, Crystal Structure Of The Btb-Back Domains Of Human Klhl11 Length = 279 Back     alignment and structure
>pdb|2NN2|A Chain A, Crystal Structure Of The Btb Domain From The LrfZBTB7 Transcriptional Regulator Length = 133 Back     alignment and structure
>pdb|2IF5|A Chain A, Structure Of The Poz Domain Of Human Lrf, A Master Regulator Of Oncogenesis Length = 120 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query449
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 3e-27
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 8e-24
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 5e-12
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 7e-12
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 9e-12
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 2e-11
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 1e-10
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 2e-10
2vpk_A116 Myoneurin; transcription regulation, transcription 9e-10
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 2e-09
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 3e-09
3b84_A119 Zinc finger and BTB domain-containing protein 48; 6e-09
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 7e-09
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 2e-08
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 2e-08
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 3e-08
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 4e-07
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 6e-07
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 9e-06
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 1e-04
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
 Score =  109 bits (274), Expect = 3e-27
 Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 21/226 (9%)

Query: 54  ILAAKSPFFYKLFSNGMKESEQRHVALRINASEE----AALMELLNFMYSNTLSTTAAPA 109
           +LAA + +F  L S    ES    V +R  +SE       +  ++ +MY+  +  +    
Sbjct: 53  VLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSV 112

Query: 110 LLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEA--VQPLTDAAR 167
             +VL  AD+F +     +C   L+   +   + +    L           +  L   A 
Sbjct: 113 H-EVLELADRFLLIRLKEFCGEFLKKK-LHLSNCVAIHSL------AHMYTLSQLALKAA 164

Query: 168 QYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEER 227
             +   +  + +  +E   LP   +   LS  ++ + SE+ +++ VLKW +      EER
Sbjct: 165 DMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEER 220

Query: 228 REVLGSRLARFIRFPHMTCRKLKKVLTCNDF--DHDVASKLVLEAL 271
                  L + +R   M    L + +       +++V  KLV +A+
Sbjct: 221 ERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query449
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.95
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.93
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.92
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.88
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.88
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.87
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.87
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.86
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.86
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.86
2vpk_A116 Myoneurin; transcription regulation, transcription 99.86
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.85
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 99.84
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 99.84
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.83
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 99.83
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 99.82
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.77
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 99.77
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.56
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.55
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.53
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.53
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.52
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.52
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.5
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 99.5
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.48
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.47
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.46
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.41
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.4
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.38
4ajy_C97 Transcription elongation factor B polypeptide 1; E 99.28
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.24
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.19
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 99.11
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 99.1
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.97
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.94
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.82
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 98.48
2fnj_C96 Transcription elongation factor B polypeptide 1; b 98.43
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 98.36
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 98.19
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 97.88
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 97.24
3kvt_A115 Potassium channel protein SHAW; tetramerization do 95.16
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 95.08
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 93.98
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 93.39
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 90.16
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 80.52
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=2.6e-46  Score=355.04  Aligned_cols=242  Identities=20%  Similarity=0.371  Sum_probs=216.1

Q ss_pred             hhHHHhhhccCCCCceeEEEEe-----eeEEeeeeeecccCHHHHHhhcCCCCcCccceEEEec----CCCCHHHHHHHh
Q 013145           24 GDEAANGNESSWSMDCSTVVRV-----KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRI----NASEEAALMELL   94 (449)
Q Consensus        24 ~~~l~~~~~~~~~~~~Dv~l~~-----~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~----~~v~~~~f~~~l   94 (449)
                      ...|.++++++.  +|||++.+     +.|+|||.|||++|+||++||+++|+|+.+.+|.|+.    +++++++|+.+|
T Consensus        20 l~~l~~l~~~~~--~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll   97 (279)
T 3i3n_A           20 SWRQNEQRRQGL--FCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVI   97 (279)
T ss_dssp             HHHHHHHHHHTT--TCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHH
T ss_pred             HHHHHHHHhcCC--CCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHH
Confidence            455666666655  56666665     4799999999999999999999999999999999862    278999999999


Q ss_pred             hhhccCeeecCCcchHHHHHHHHhhcCChhHHHHHHHHhhcCCCChhhHHHHhhhcccccchhchHHHHHHHHHHHHHhh
Q 013145           95 NFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRY  174 (449)
Q Consensus        95 ~yiYtg~i~~~~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~~l~~~n~~~i~~~a~~~~~~~~~~~L~~~~~~~i~~~f  174 (449)
                      +|+|||++.++. +++.+++.+|++|+++.|++.|++||.+ .++++||+.++.+|..+    ++..|.+.|.+||.+||
T Consensus        98 ~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f  171 (279)
T 3i3n_A           98 EYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIRRNF  171 (279)
T ss_dssp             HHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTH
T ss_pred             HhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHHHHH
Confidence            999999999997 8999999999999999999999999999 89999999999999887    89999999999999999


Q ss_pred             hhhhcccccccCCCHHHHHhcccCCCccCCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhhcCCCCCCCHHHHHhhhc
Q 013145          175 KDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLT  254 (449)
Q Consensus       175 ~~v~~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~Wi~~~~~~~~~r~~~~~~~ll~~vRf~~l~~~~L~~~~~  254 (449)
                      .++.. +++|++|+.+.+..+|++|+|+|.+|.+||+++++|++|+   +++|.+++ ++||++||||+|++++|.+.++
T Consensus       172 ~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~  246 (279)
T 3i3n_A          172 HKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTRHVK  246 (279)
T ss_dssp             HHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTT
T ss_pred             HHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhh
Confidence            99999 9999999999999999999999999999999999999999   89999999 7999999999999999999999


Q ss_pred             cCCCC--chHHHHHHHHHHhhhccCc
Q 013145          255 CNDFD--HDVASKLVLEALFFKAEAP  278 (449)
Q Consensus       255 ~~~l~--~~~~~~~l~ea~~~~~~~~  278 (449)
                      .++++  ++.|++++.+|++||..|.
T Consensus       247 ~~~l~~~~~~c~~~l~ea~~~~~~~~  272 (279)
T 3i3n_A          247 PERLVANNEVCVKLVADAVERHALRA  272 (279)
T ss_dssp             TSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred             ccchhcCCHHHHHHHHHHHHhccCch
Confidence            88876  4799999999999999764
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 449
d1r29a_122 d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB 2e-06
d1buoa_121 d.42.1.1 (A:) Promyelocytic leukaemia zinc finger 1e-05
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 38  DCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFM 97
           D   VV  +       +L A S  FY +F++ +K +                   LL+FM
Sbjct: 27  DVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVIN--LDPEINPEGFNILLDFM 84

Query: 98  YSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 134
           Y++ L+       + V+  A   ++   +  C + ++
Sbjct: 85  YTSRLNLREGNI-MAVMATAMYLQMEHVVDTCRKFIK 120
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query449
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.87
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.86
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.26
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.2
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 98.8
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 98.35
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 97.51
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 97.48
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 96.77
d3kvta_103 akv3.1 voltage-gated potassium channel {California 96.64
d1t1da_100 Shaker potassium channel {California sea hare (Apl 95.58
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 92.33
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 90.22
d1fs1b261 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 88.18
d1nexa272 Centromere DNA-binding protein complex Cbf3 subuni 86.04
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.1e-23  Score=166.49  Aligned_cols=105  Identities=17%  Similarity=0.310  Sum_probs=92.5

Q ss_pred             HHHhhhccCCCCceeEEEEe--eeEEeeeeeecccCHHHHHhhcCCCCcCccceEEEecCCCCHHHHHHHhhhhccCeee
Q 013145           26 EAANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLS  103 (449)
Q Consensus        26 ~l~~~~~~~~~~~~Dv~l~~--~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~v~~~~f~~~l~yiYtg~i~  103 (449)
                      .|.++++++  .+|||++.+  ++|+|||+|||++|+||++||.+++.|+.+..+.++  ++++++|+.+|+|+|||++.
T Consensus        15 ~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~e~~~~~~~~~--~v~~~~f~~ll~~~Ytg~~~   90 (122)
T d1r29a_          15 NLNRLRSRD--ILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDP--EINPEGFNILLDFMYTSRLN   90 (122)
T ss_dssp             HHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCT--TSCHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHhcC--CCeEEEEEECCEEEEEehHHhhhCCHHHHHHhccchhhhcceeeeec--ccCHHHHHHHHhhhcCCeec
Confidence            344555554  467777776  689999999999999999999999998877766655  99999999999999999999


Q ss_pred             cCCcchHHHHHHHHhhcCChhHHHHHHHHhhc
Q 013145          104 TTAAPALLDVLMAADKFEVASCMRYCSRLLRN  135 (449)
Q Consensus       104 ~~~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~  135 (449)
                      ++. +++.+++.+|++|+++.|++.|.+||+.
T Consensus        91 i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~~  121 (122)
T d1r29a_          91 LRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA  121 (122)
T ss_dssp             CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             Cch-hhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence            997 8999999999999999999999999975
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure