Citrus Sinensis ID: 013185

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
Protein Sequence
MQTRYMERSNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGTIF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccccccccEEccccccEEEEEEEcccccEEccccccccEEEEEEEcccccccccccccHHHHHHccccccccccccccccEEEEEcccEEEccccEEEccccccccccEEEEEEEEcccccccEEEEcccccEEEEEcccccccccccccccccccEEcccccccHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHHHccccccccEEEEEEcccccEEEEEccccEEEEEEcccEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEcccccccccccEEEEcccccEEEEEEEccccEEEcccccccEEEEEEEEcccccccccccccHHHHHHccEccccccccEEccEEEEEEcccEEEcccEEEEcccccccccEEEEEEEEEccccccEEEEEEEcccEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEccccccEEEEEccEEEEEEEEEccEEEcHHHccHHHHHHHHHHHHHHHHHHHHcEccccccHccccccccccccccccccccccccccccHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mqtrymersnskrgldsssaeegqpdrkrpALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKlgpakltgrsspkriegpdgrnlqlhfrtrlslplftggkvegeqgTAIHIVLIdantghvvttgpesLVKLDVVVLEgdfnnedddnwtqeEFVSHVVKeregkrpllsgdlQVTLKegvgtlgdltftdnsswirsRKFRLGLKVASGYCEgirireaktdaftvkdhrgelykkhyppalndEVWRLEkigkdgsfhkrlnkagifTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKtcvlsgklyvyypddprnvgvVFNNIYEFCGliadgqyhsadslsesqKVHVDTLVKKAYDNWMHVIEYDGKsllgftqnksvdapptdfqtgppnytnpfsqqlalptlsvpvppeqpsmdsgltvggtif
Flexible Loop (DISEMBL)
mqtrymersnskrgldsssaeegqpdrkrPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALaklgpakltgrsspkriegpdgrnlqlhFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDfnnedddnwtqEEFVSHvvkeregkrpllsgdlqvtlkegvgtlgdltftdnsswirsrkfrlglkvasgycegirireaktdaftvkdhrgelykkhyppalndevWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIlgsgmsnkmWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPeqpsmdsgltvggtif
Low Complexity Region (SEG)
MQTRYMERSNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGTIF
Disordered region (IsUnstruct)
********************************ASVIVEALKVDSLQKLCSSLEPILRRVVSEEV****************************LQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKE****RPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFT******************************************************
Disordered Region (DISOPRED)
***********************************IVEALKVDSL****************EEVERAL*************************QLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVK*****RPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLL**************************************************TVGGT**
Disordered Region (DISEMBL)
*****************************PALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGTIF
Disordered Region (DISPRO)
***************************KRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTG*SSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKS****************NP********TL****************V*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQTRYMERSNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGTIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	448
359495503	759	PREDICTED: uncharacterized protein LOC10	0.993	0.586	0.861	0.0
147785125	637	hypothetical protein VITISV_001611 [Viti	0.993	0.698	0.864	0.0
302144195	636	unnamed protein product [Vitis vinifera]	0.993	0.699	0.861	0.0
224114057	637	predicted protein [Populus trichocarpa]	0.993	0.698	0.812	0.0
357475877	629	Calmodulin-binding protein [Medicago tru	0.991	0.705	0.792	0.0
224114061	625	predicted protein [Populus trichocarpa]	0.982	0.704	0.796	0.0
356555022	635	PREDICTED: uncharacterized protein LOC10	0.993	0.700	0.791	0.0
224147096	599	predicted protein [Populus trichocarpa]	0.919	0.687	0.840	0.0
356521307	623	PREDICTED: uncharacterized protein LOC10	0.975	0.701	0.835	0.0
356527925	624	PREDICTED: uncharacterized protein LOC10	0.975	0.700	0.820	0.0

>gi|359495503|ref|XP_002273993.2| PREDICTED: uncharacterized protein LOC100256775 [Vitis vinifera]

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/449 (86%), Positives = 409/449 (91%), Gaps = 4/449 (0%)

Query: 1   MQTRYMERSNS----KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPIL 56
           MQTRYMERSNS    KR LD SS EEGQ DRKRPALASVIVEALKVDSLQKLCSSLEPIL
Sbjct: 129 MQTRYMERSNSLAREKRALDPSSTEEGQSDRKRPALASVIVEALKVDSLQKLCSSLEPIL 188

Query: 57  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQG 116
           RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQG
Sbjct: 189 RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQG 248

Query: 117 TAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKR 176
           T IHIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKR
Sbjct: 249 TTIHIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKR 308

Query: 177 PLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFT 236
           PLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFT
Sbjct: 309 PLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFT 368

Query: 237 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 296
           VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR
Sbjct: 369 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 428

Query: 297 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 356
           NILGSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHS
Sbjct: 429 NILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHS 488

Query: 357 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNP 416
           ADSL+++QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N 
Sbjct: 489 ADSLTDNQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNS 548

Query: 417 FSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
           F  QL LP+L V VPP+QPS+   +TVGG
Sbjct: 549 FDHQLTLPSLPVSVPPQQPSVGPSITVGG 577

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147785125|emb|CAN66517.1| hypothetical protein VITISV_001611 [Vitis vinifera]

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/449 (86%), Positives = 409/449 (91%), Gaps = 4/449 (0%)

Query: 1   MQTRYMERSNS----KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPIL 56
           MQTRYMERSNS    KR LD SS EEGQ DRKRPALASVIVEALKVDSLQKLCSSLEPIL
Sbjct: 1   MQTRYMERSNSLAREKRALDPSSTEEGQSDRKRPALASVIVEALKVDSLQKLCSSLEPIL 60

Query: 57  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQG 116
           RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQG
Sbjct: 61  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQG 120

Query: 117 TAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKR 176
           T IHIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKR
Sbjct: 121 TTIHIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKR 180

Query: 177 PLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFT 236
           PLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFT
Sbjct: 181 PLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFT 240

Query: 237 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 296
           VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR
Sbjct: 241 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 300

Query: 297 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 356
           NILGSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHS
Sbjct: 301 NILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHS 360

Query: 357 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNP 416
           ADSL+E+QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N 
Sbjct: 361 ADSLTENQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNS 420

Query: 417 FSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
           F  QL LP+L V VPP+QPS+   +TVGG
Sbjct: 421 FDHQLTLPSLPVSVPPQQPSVGPSITVGG 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302144195|emb|CBI23322.3| unnamed protein product [Vitis vinifera]

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/449 (86%), Positives = 409/449 (91%), Gaps = 4/449 (0%)

Query: 1   MQTRYMERSNS----KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPIL 56
           MQTRYMERSNS    KR LD SS EEGQ DRKRPALASVIVEALKVDSLQKLCSSLEPIL
Sbjct: 1   MQTRYMERSNSLAREKRALDPSSTEEGQSDRKRPALASVIVEALKVDSLQKLCSSLEPIL 60

Query: 57  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQG 116
           RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQG
Sbjct: 61  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQG 120

Query: 117 TAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKR 176
           T IHIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKR
Sbjct: 121 TTIHIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKR 180

Query: 177 PLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFT 236
           PLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFT
Sbjct: 181 PLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFT 240

Query: 237 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 296
           VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR
Sbjct: 241 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 300

Query: 297 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 356
           NILGSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHS
Sbjct: 301 NILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHS 360

Query: 357 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNP 416
           ADSL+++QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N 
Sbjct: 361 ADSLTDNQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNS 420

Query: 417 FSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
           F  QL LP+L V VPP+QPS+   +TVGG
Sbjct: 421 FDHQLTLPSLPVSVPPQQPSVGPSITVGG 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114057|ref|XP_002316655.1| predicted protein [Populus trichocarpa] gi|222859720|gb|EEE97267.1| predicted protein [Populus trichocarpa]

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/454 (81%), Positives = 404/454 (88%), Gaps = 9/454 (1%)

Query: 1   MQTRYMERSNS--------KRGLDSSSA-EEGQPDRKRPALASVIVEALKVDSLQKLCSS 51
           MQTRY++RSNS        KRGLDSS+  +EGQP+RKRPALASVIVEALKVDSLQ+LCSS
Sbjct: 1   MQTRYVDRSNSMAAAPAREKRGLDSSTGGDEGQPERKRPALASVIVEALKVDSLQRLCSS 60

Query: 52  LEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKV 111
           LEPILRRVVSEEVERALAK+GPAKLTGRSSPK IEGP GRNLQLHFR+RLSLPLFTGGKV
Sbjct: 61  LEPILRRVVSEEVERALAKIGPAKLTGRSSPKCIEGPGGRNLQLHFRSRLSLPLFTGGKV 120

Query: 112 EGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKE 171
           EGEQG AIHIVLID NTGHVVT+GPES VKLDV+VLEGDFNNEDDDNWTQEEF SHVVKE
Sbjct: 121 EGEQGAAIHIVLIDGNTGHVVTSGPESSVKLDVIVLEGDFNNEDDDNWTQEEFESHVVKE 180

Query: 172 REGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAK 231
           REGKRPLL+GDLQVTLKEGVGTLG+L FTDNSSWIRSRKFRLGLKVASG CE IRIREAK
Sbjct: 181 REGKRPLLTGDLQVTLKEGVGTLGELIFTDNSSWIRSRKFRLGLKVASGCCEDIRIREAK 240

Query: 232 TDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRD 291
           TDAFTVKDHRGELYKKHYPPALND+VWRLEKIGKDGSFHKRL KAGI++VEDFLRLVVRD
Sbjct: 241 TDAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLTKAGIYSVEDFLRLVVRD 300

Query: 292 SQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIAD 351
            QRLR ILGSGMSNKMWD LV+HAKTCVLSGK Y+YYP+D +NVG+VFNNIYEF GLIA+
Sbjct: 301 PQRLRTILGSGMSNKMWDSLVEHAKTCVLSGKHYIYYPEDAKNVGIVFNNIYEFSGLIAN 360

Query: 352 GQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPP 411
           G+Y+S+ SLS++QKV+VD+LVKKAYDNWMHVIEYDGKSLL F QN+ + A   D  +   
Sbjct: 361 GEYYSSGSLSDNQKVYVDSLVKKAYDNWMHVIEYDGKSLLDFKQNQGIVASQNDVPSSQQ 420

Query: 412 NYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
            + N +  Q+ LP +SVPVP EQP MDSG  VGG
Sbjct: 421 EFLNSYDHQVTLPIMSVPVPSEQPVMDSGPIVGG 454

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475877|ref|XP_003608224.1| Calmodulin-binding protein [Medicago truncatula] gi|355509279|gb|AES90421.1| Calmodulin-binding protein [Medicago truncatula]

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/448 (79%), Positives = 399/448 (89%), Gaps = 4/448 (0%)

Query: 1   MQTRYMERSNS---KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILR 57
           M  RY++   +   KR LDS+SAE+GQPDRKRPALASVIVEALKVDS+QKLCSSLEPILR
Sbjct: 1   MHGRYVDHHVARAEKRSLDSTSAEDGQPDRKRPALASVIVEALKVDSMQKLCSSLEPILR 60

Query: 58  RVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGT 117
           RVVSEEVERALAKLGP KL GRSSPKRIEGPD  NLQLHF+TRLSLPLFTGGKVEGEQG 
Sbjct: 61  RVVSEEVERALAKLGPTKLNGRSSPKRIEGPDDNNLQLHFKTRLSLPLFTGGKVEGEQGA 120

Query: 118 AIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRP 177
           AIHIVL+DANTGH+VT+GPES  KLDV VLEGDFNNEDD+NW++EEF SH+VKEREGKRP
Sbjct: 121 AIHIVLVDANTGHIVTSGPESCAKLDVFVLEGDFNNEDDENWSEEEFESHIVKEREGKRP 180

Query: 178 LLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTV 237
           LLSGDLQV LK+GVGTLG+++FTDNSSWIRSRKFRLGLKV+SG+C+G+RIREAK++AFTV
Sbjct: 181 LLSGDLQVILKDGVGTLGEISFTDNSSWIRSRKFRLGLKVSSGFCDGMRIREAKSEAFTV 240

Query: 238 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRN 297
           KDHRGELYKKHYPPAL+DEVWRLEKIGKDGSFHKRLNKAG+F VEDFLRLV+RD QRLRN
Sbjct: 241 KDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGVFNVEDFLRLVIRDPQRLRN 300

Query: 298 ILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSA 357
           ILGSGMSNKMWD+LV+HAKTCVLSGKLYVYYP+D RNVGVVFN+IYE  GLIA+ QYH+A
Sbjct: 301 ILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYHTA 360

Query: 358 DSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPF 417
           DSLSESQKV+VDTLVKKAYDNWMHVIEYDGKSLL + Q+K+++        G   Y+N  
Sbjct: 361 DSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYNQDKNLEPAHPQALMGSHEYSN-L 419

Query: 418 SQQLALPTLSVPVPPEQPSMDSGLTVGG 445
            QQ ++ +L  PV   QPSMD+G TVGG
Sbjct: 420 IQQTSIHSLPHPVNTGQPSMDTGATVGG 447

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114061|ref|XP_002316656.1| predicted protein [Populus trichocarpa] gi|222859721|gb|EEE97268.1| predicted protein [Populus trichocarpa]

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/452 (79%), Positives = 398/452 (88%), Gaps = 12/452 (2%)

Query: 6   MERSNS-----------KRGLDSSSA-EEGQPDRKRPALASVIVEALKVDSLQKLCSSLE 53
           MERS+S           KR LDSSS  +EGQPDRKRPALASVIVEALKVDSLQ+LCSSLE
Sbjct: 1   MERSDSMEAVLAAAARGKRVLDSSSGHDEGQPDRKRPALASVIVEALKVDSLQRLCSSLE 60

Query: 54  PILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEG 113
           PILRRVVSEEVERALAKLGPAKL GRSSPK+IEGPDGRNLQLHFR+R+SLPLFTGGKVEG
Sbjct: 61  PILRRVVSEEVERALAKLGPAKLNGRSSPKQIEGPDGRNLQLHFRSRVSLPLFTGGKVEG 120

Query: 114 EQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKERE 173
           EQG AIHIVLIDANTG  VT+GPES VKLD++VLEGDFN+EDDDNWTQE+F SHVVKERE
Sbjct: 121 EQGAAIHIVLIDANTGCAVTSGPESSVKLDLIVLEGDFNDEDDDNWTQEKFESHVVKERE 180

Query: 174 GKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTD 233
           GKRPLL+GDLQVTLK+GVGTLG+LTFTDNSSW RSRKFRLGLKVASGYCEGIRIREAKTD
Sbjct: 181 GKRPLLTGDLQVTLKQGVGTLGELTFTDNSSWTRSRKFRLGLKVASGYCEGIRIREAKTD 240

Query: 234 AFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQ 293
           A TVKDHRGELYKKHYPP LNDEVWRLEKIGKDGSFHKRLNKAGI TVEDFLRL+VRD+Q
Sbjct: 241 AITVKDHRGELYKKHYPPTLNDEVWRLEKIGKDGSFHKRLNKAGIHTVEDFLRLIVRDAQ 300

Query: 294 RLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQ 353
            LR  LGSGMSNKMWD LV+HAKTCVLSGKLY+YYPDD +NVGVVFNNIYE  GLI++GQ
Sbjct: 301 GLRTTLGSGMSNKMWDSLVEHAKTCVLSGKLYIYYPDDAKNVGVVFNNIYELSGLISNGQ 360

Query: 354 YHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNY 413
           ++SADSL ++QK++VD+LVKKAYDNWMHVIEYDG SLL F Q++ V A   D  +G  ++
Sbjct: 361 FYSADSLPDNQKIYVDSLVKKAYDNWMHVIEYDGNSLLDFKQHQGVAASQNDVPSGHQDF 420

Query: 414 TNPFSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
            NP+  Q +LPT+SVPVP EQP + S   +GG
Sbjct: 421 LNPYDHQDSLPTISVPVPSEQPVVHSSPAIGG 452

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555022|ref|XP_003545838.1| PREDICTED: uncharacterized protein LOC100802994 [Glycine max]

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/451 (79%), Positives = 393/451 (87%), Gaps = 6/451 (1%)

Query: 1   MQTRYMERSNS----KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPIL 56
           MQTRY+ERS+S    KR LDS SA+E QP RKRPALASVIVEALKVDSLQKLCSSLEPIL
Sbjct: 1   MQTRYIERSSSSAREKRALDSGSADEDQPQRKRPALASVIVEALKVDSLQKLCSSLEPIL 60

Query: 57  RRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQG 116
           RRVVSEEVE ALAKL PAKL+GRSSPK IEGPD  +LQL FRTRLSLPLFTGGKVEGE G
Sbjct: 61  RRVVSEEVECALAKLVPAKLSGRSSPKGIEGPDDSSLQLQFRTRLSLPLFTGGKVEGEHG 120

Query: 117 TAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKR 176
           +AIHIVLID  TGHVVT GP S VKLDV+VLEGDFNNEDDDNW++E F SHVVKEREGKR
Sbjct: 121 SAIHIVLIDTTTGHVVTCGPASCVKLDVIVLEGDFNNEDDDNWSEEYFDSHVVKEREGKR 180

Query: 177 PLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFT 236
           PLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFR+GLKV+ G  EG+RIREAKT+AFT
Sbjct: 181 PLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRMGLKVSPGCYEGMRIREAKTEAFT 240

Query: 237 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 296
           VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+TVED ++LVVRD QRLR
Sbjct: 241 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVQLVVRDPQRLR 300

Query: 297 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 356
           NILGSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD RNVGVVFNNIYE  GLI + QY+S
Sbjct: 301 NILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYS 360

Query: 357 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNY--T 414
           ADSLS+ QKV+VDTLVKKAY+NWMHVIEYDG+SLL + QNK++         G  +Y  +
Sbjct: 361 ADSLSDGQKVYVDTLVKKAYENWMHVIEYDGESLLNYNQNKTLGTSQPLAPVGSHDYSIS 420

Query: 415 NPFSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
           N   QQ ++P+L VP+   QPSM+  +TVGG
Sbjct: 421 NSLDQQTSIPSLPVPLTTGQPSMNPAVTVGG 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147096|ref|XP_002336406.1| predicted protein [Populus trichocarpa] gi|222834923|gb|EEE73372.1| predicted protein [Populus trichocarpa]

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/415 (84%), Positives = 377/415 (90%), Gaps = 3/415 (0%)

Query: 34  SVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLT---GRSSPKRIEGPDG 90
           SVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLT    RSSPKR+EGPDG
Sbjct: 1   SVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTVRECRSSPKRLEGPDG 60

Query: 91  RNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGD 150
           RNLQLHFR+RLSLPLFT GKVEGEQG AIHIVLID NTG VVT+GPES VKLDV+VLEGD
Sbjct: 61  RNLQLHFRSRLSLPLFTAGKVEGEQGAAIHIVLIDGNTGRVVTSGPESSVKLDVIVLEGD 120

Query: 151 FNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRK 210
           FNNEDDDNWT+EEF SHVVKEREGKRPLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRK
Sbjct: 121 FNNEDDDNWTREEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRK 180

Query: 211 FRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFH 270
           FRLGLKVASG CEGIR+REAKTDAFTVKDHRGELYKKHYPPAL DEVWRLEKIGKDGSFH
Sbjct: 181 FRLGLKVASGCCEGIRVREAKTDAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFH 240

Query: 271 KRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPD 330
           KRLNKAGI++VEDFLRLVVRDSQRLR ILGSGMSNKMWDVLV+HAKTCVLSGKLY+YYP+
Sbjct: 241 KRLNKAGIYSVEDFLRLVVRDSQRLRTILGSGMSNKMWDVLVEHAKTCVLSGKLYIYYPE 300

Query: 331 DPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSL 390
           D +NVGVVFNNIYE  GLIA+GQY+SADSLS++QKV+VD+LVKKAYDNWMH IEYDGKSL
Sbjct: 301 DEKNVGVVFNNIYELSGLIANGQYYSADSLSDNQKVYVDSLVKKAYDNWMHAIEYDGKSL 360

Query: 391 LGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGG 445
           L F  N+ +DA   +  +    + N +  Q+ LPT+SVPVP EQP MDSGL VGG
Sbjct: 361 LDFKMNQGIDALQNEVPSVQQEFLNSYDHQVTLPTISVPVPSEQPVMDSGLAVGG 415

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521307|ref|XP_003529298.1| PREDICTED: uncharacterized protein LOC100812605 [Glycine max]

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/439 (83%), Positives = 402/439 (91%), Gaps = 2/439 (0%)

Query: 8   RSNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA 67
           R+  KRGLDS+SAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA
Sbjct: 4   RAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA 63

Query: 68  LAKLGPAKL-TGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDA 126
           LAKLGPAKL TGRSSPKRIEGPDG+NLQLHF+TRLSLPLFTGGKVEGEQGTAIHIVLIDA
Sbjct: 64  LAKLGPAKLNTGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGTAIHIVLIDA 123

Query: 127 NTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVT 186
           N+GH+VT+GPES V+LDV+VLEGDFNNEDDDNW +EEF SH+VKEREGKRPLL+GDLQVT
Sbjct: 124 NSGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRPLLTGDLQVT 183

Query: 187 LKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYK 246
           LKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASG CE +RIREAK++ FTVKDHRGELYK
Sbjct: 184 LKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVKDHRGELYK 243

Query: 247 KHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNK 306
           KHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+ VEDFLRLVVRD QRLRNILGSGMSNK
Sbjct: 244 KHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYMVEDFLRLVVRDPQRLRNILGSGMSNK 303

Query: 307 MWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKV 366
           MWD+LV+HAKTCVLSGKLYVYYP+D RNVGVVFNNIYE  GLIA+ QY+SADSLSE+QKV
Sbjct: 304 MWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQYYSADSLSENQKV 363

Query: 367 HVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTL 426
           +VDTLVKKAYDNWMHVIEYDGKSL+   ++K++D            Y+N   QQ+++P L
Sbjct: 364 YVDTLVKKAYDNWMHVIEYDGKSLINDNEDKALDTTHPQAPMTSHEYSNSL-QQISIPAL 422

Query: 427 SVPVPPEQPSMDSGLTVGG 445
            +PV P QPSMDSG+TVGG
Sbjct: 423 PLPVHPGQPSMDSGVTVGG 441

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527925|ref|XP_003532556.1| PREDICTED: uncharacterized protein LOC100806393 [Glycine max]

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/440 (82%), Positives = 398/440 (90%), Gaps = 3/440 (0%)

Query: 8   RSNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA 67
           R+  KRGLD +SAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA
Sbjct: 4   RAQEKRGLDLASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERA 63

Query: 68  LAKLGPAKL--TGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLID 125
           LAKLGPAKL  TGRSSPK IEGPDG+ LQLHF+TRLSLPLFTGGKVEGEQGT+IHIVLID
Sbjct: 64  LAKLGPAKLNNTGRSSPKWIEGPDGKILQLHFKTRLSLPLFTGGKVEGEQGTSIHIVLID 123

Query: 126 ANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQV 185
           ANTGH+VT+GPES V+LDV+VLEGDFNNEDDDNW +EEF SH+VKEREGKRPLL+GDLQV
Sbjct: 124 ANTGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRPLLTGDLQV 183

Query: 186 TLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELY 245
           TLKEG+GTLG+LTFTDNSSWIRSRKFRLGLKVASG CE +RIREAK++ FTVKDHRGELY
Sbjct: 184 TLKEGLGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVKDHRGELY 243

Query: 246 KKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSN 305
           KKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+TVEDFLR VVRD QRLRNILGSGMSN
Sbjct: 244 KKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRFVVRDPQRLRNILGSGMSN 303

Query: 306 KMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQK 365
           KMWD+LV+HAKTCVLSGKLYVYYPDD RNVGVVFNNIYE  GLIA+ QY+SADSLSE+QK
Sbjct: 304 KMWDILVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSENQK 363

Query: 366 VHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPT 425
           V+VDTLVKKAYDNWMHVIEYDGKSL+   ++K++D            Y+N   QQ+++P 
Sbjct: 364 VYVDTLVKKAYDNWMHVIEYDGKSLINDNEDKTLDTTHPQAPMTSHEYSNSL-QQISIPA 422

Query: 426 LSVPVPPEQPSMDSGLTVGG 445
           L +P+ P QPS+DSG+ VGG
Sbjct: 423 LPLPLHPGQPSVDSGVAVGG 442

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	448
TAIR|locus:2117557	601	AT4G25800 [Arabidopsis thalian	0.906	0.675	0.761	4.3e-164
TAIR|locus:2054000	622	AT2G18750 [Arabidopsis thalian	0.888	0.639	0.750	5.5e-164
TAIR|locus:2174522	647	AT5G57580 [Arabidopsis thalian	0.966	0.669	0.703	7.3e-162
TAIR|locus:2061112	599	AT2G24300 [Arabidopsis thalian	0.848	0.634	0.693	3.9e-140
TAIR|locus:2126679	562	AT4G31000 [Arabidopsis thalian	0.850	0.677	0.651	1.1e-133
TAIR|locus:505006222	451	SARD1 "AT1G73805" [Arabidopsis	0.832	0.827	0.446	2.1e-77
TAIR|locus:2148548	563	CBP60G "Cam-binding protein 60	0.785	0.625	0.396	5.4e-63

TAIR|locus:2117557 AT4G25800 [Arabidopsis thaliana (taxid:3702)]

 Score = 1597 (567.2 bits), Expect = 4.3e-164, P = 4.3e-164
 Identities = 313/411 (76%), Positives = 353/411 (85%)

Query:    12 KRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKL 71
             KR  + +  ++ +P+RKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKL
Sbjct:     2 KRNFERN--DDDKPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKL 59

Query:    72 GPAKLTGRS--SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTG 129
              P +LT  S  SPKRI GPDGRNLQLHF++RLSLPLFTGG+VEGEQG  IH+VLIDANTG
Sbjct:    60 VPTRLTTSSVFSPKRIGGPDGRNLQLHFKSRLSLPLFTGGRVEGEQGATIHVVLIDANTG 119

Query:   130 HVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKE 189
               VT GPE+ +KL+VVVL GDFNNEDD++WTQEEF SHVVKEREGKRPLL+GDL V LKE
Sbjct:   120 RPVTVGPEASLKLEVVVLGGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLFVVLKE 179

Query:   190 GVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHY 249
             GVGTLG++ FTDNSSWIRSRKFRLGL+V SGYC+GIRIREAKT+AF+VKDHRGELYKKHY
Sbjct:   180 GVGTLGEIVFTDNSSWIRSRKFRLGLRVPSGYCDGIRIREAKTEAFSVKDHRGELYKKHY 239

Query:   250 PPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWD 309
             PPALNDEVWRLEKIGKDG+FHKRL  AGI TVE FLR +VRDS +LR ILGSGMSNKMWD
Sbjct:   240 PPALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNKMWD 299

Query:   310 VLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVD 369
             +LV+HAKTCVLSGKLY+YY +D R+VGVVFNNIYE  GLI + QY SADSLSESQKV+VD
Sbjct:   300 LLVEHAKTCVLSGKLYIYYTEDSRSVGVVFNNIYELSGLITEDQYLSADSLSESQKVYVD 359

Query:   370 TLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNY-TNPFSQ 419
              LVKKAY+NW  V+EY+G+SLL   Q + +D   TD  T   +Y T P SQ
Sbjct:   360 GLVKKAYENWNQVVEYEGESLLNLNQPERLDISQTDPVTALASYSTVPLSQ 410

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2054000 AT2G18750 [Arabidopsis thaliana (taxid:3702)]

 Score = 1596 (566.9 bits), Expect = 5.5e-164, P = 5.5e-164
 Identities = 304/405 (75%), Positives = 355/405 (87%)

Query:     1 MQTRYMERSNS---KRGL--DSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPI 55
             MQTRYMER+NS   KR L  D +  ++ QP+RKRPALASVIVEALK+DSLQ+LCSSLEPI
Sbjct:     1 MQTRYMERTNSMREKRKLEEDDNQQQQQQPERKRPALASVIVEALKMDSLQRLCSSLEPI 60

Query:    56 LRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQ 115
             LRRVVSEEVERALAKLGPA+L+ RSSPKRIEG  GRNLQL FR+RLS+PLFTGGK+EGEQ
Sbjct:    61 LRRVVSEEVERALAKLGPARLSERSSPKRIEGIGGRNLQLQFRSRLSVPLFTGGKIEGEQ 120

Query:   116 GTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGK 175
             G AIH+VL+D  TGHV+T GPE+  KLDVVVL+GDFN EDDD W+ EEF  H+VKER+GK
Sbjct:   121 GAAIHVVLLDMTTGHVLTVGPEASAKLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGK 180

Query:   176 RPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAF 235
             RPLL+GD+QVTLKEGVGTLG+L FTDNSSWIR RKFRLGL+V+SGYCEG+R+REAKT+AF
Sbjct:   181 RPLLTGDVQVTLKEGVGTLGELIFTDNSSWIRCRKFRLGLRVSSGYCEGMRVREAKTEAF 240

Query:   236 TVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRL 295
             TVKDHRGELYKKHYPPAL+DEVWRLEKIGKDG+FHK+LNKAGI+ V++FLRL+V+DSQ+L
Sbjct:   241 TVKDHRGELYKKHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKL 300

Query:   296 RNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYH 355
             R ILGSGMSN+MW+ L +H+KTCVLS  LYVYYP+D  +VGVVFNNIYEF GLI+  QY+
Sbjct:   301 RTILGSGMSNRMWETLAEHSKTCVLSEMLYVYYPED--SVGVVFNNIYEFSGLISGKQYY 358

Query:   356 SADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVD 400
              ADSLS++QK +VD LV+KAY+NW  VIEYD KSL+ F Q    D
Sbjct:   359 PADSLSDNQKGYVDGLVRKAYENWEQVIEYDSKSLMNFNQVSKTD 403

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2174522 AT5G57580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1576 (559.8 bits), Expect = 7.3e-162, P = 7.3e-162
 Identities = 309/439 (70%), Positives = 360/439 (82%)

Query:     9 SNSKRGLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERAL 68
             + +KR LD +  ++ QP+RKRPA ASVIVEALKVDSLQKLCSSLEPILRRVVSEE+ERAL
Sbjct:    10 NRAKRNLDGN--DDDQPERKRPAFASVIVEALKVDSLQKLCSSLEPILRRVVSEELERAL 67

Query:    69 AKLGPAKLTGRS--SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDA 126
             AKLGPA+LTG S  SPKRIEGPDGR LQLHF++RLSLPLFTGGKVEGEQG  IH+VLIDA
Sbjct:    68 AKLGPARLTGSSGSSPKRIEGPDGRKLQLHFKSRLSLPLFTGGKVEGEQGAVIHVVLIDA 127

Query:   127 NTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVT 186
             NTG  V  GPE+  KL +VVLEGDFN EDD++WTQEEF SHVVKER GKRPLL+G++ VT
Sbjct:   128 NTGRAVVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRPLLTGEVYVT 187

Query:   187 LKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYK 246
             LKEGVGTLG+L FTDNSSWIRSRKFRLGL+V SG C+G+RIREAKT+AF VKDHRGELYK
Sbjct:   188 LKEGVGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRIREAKTEAFVVKDHRGELYK 247

Query:   247 KHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNK 306
             KHYPPALND+VWRL+KIGKDG+FHK+L   GI TVEDFLR++V+DS +LR ILGSGMSNK
Sbjct:   248 KHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTILGSGMSNK 307

Query:   307 MWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKV 366
             MWD LV+HAKTCV S KLY+YY +D RNVGVVFNNIYE  GLI+  QY SADSL++SQKV
Sbjct:   308 MWDALVEHAKTCVQSSKLYIYYAEDSRNVGVVFNNIYELSGLISGDQYFSADSLTDSQKV 367

Query:   367 HVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTL 426
             +V+ LVKKAY+NW  VIEYDGKSLL   Q + +    T+ +       +   Q +A  + 
Sbjct:   368 YVEGLVKKAYENWNLVIEYDGKSLLDLKQPQRLSITHTNLENYSTAAIDHPMQMVAGHSS 427

Query:   427 SVPVPPEQPSMDSGLTVGG 445
             S+P P + P + S   +GG
Sbjct:   428 SMP-PNQSPVL-SDFAIGG 444

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2061112 AT2G24300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
 Identities = 267/385 (69%), Positives = 317/385 (82%)

Query:    11 SKRGLDSSSAEEGQ-PDRKR---PALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVER 66
             +KRG + S  +  + P+ KR   PALASVIVEA+KVDSLQ+LCSSLEP+ RR+VSEEVER
Sbjct:     2 NKRGYECSQEDTDKLPESKRQKVPALASVIVEAVKVDSLQRLCSSLEPLFRRIVSEEVER 61

Query:    67 ALAKLGPAKLTGRS-SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLID 125
             AL++LG AKLT RS  PKRI+  +GRNLQLHFRTR+   LFTGGKVEGE+G+AIH+VLID
Sbjct:    62 ALSRLGNAKLTSRSPEPKRIQDRNGRNLQLHFRTRMPPHLFTGGKVEGERGSAIHVVLID 121

Query:   126 ANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQV 185
             ANTG+VV TG ES  KL+VVVLEGDFN+EDD++WT+E F S  VKEREGKRP+L+GD Q+
Sbjct:   122 ANTGNVVQTGEESASKLNVVVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQI 181

Query:   186 TLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELY 245
              LKEGVGTLG+LTFTDNSSWIRSRKFRLG+K ASGY +   IREAKT+ F VKDHRGELY
Sbjct:   182 VLKEGVGTLGELTFTDNSSWIRSRKFRLGVKPASGYGDSFCIREAKTEPFAVKDHRGELY 241

Query:   246 KKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSN 305
             KKHYPPA++DEVWRL++I KDG  HK+L KA I TVEDFLRL+V+D Q+LRN+LGSGMSN
Sbjct:   242 KKHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNLLGSGMSN 301

Query:   306 KMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQK 365
             +MW+  V+HAKTCVL GKLYV+Y D     GVVFN+IYEF GLI +GQ+ S +SL+  QK
Sbjct:   302 RMWENTVEHAKTCVLGGKLYVFYTDQTHATGVVFNHIYEFRGLITNGQFLSLESLNHDQK 361

Query:   366 VHVDTLVKKAYDNWMHVIEYDGKSL 390
             +  D LVK AY+NW   IEYDGK L
Sbjct:   362 ISADILVKLAYENWHKAIEYDGKLL 386

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2126679 AT4G31000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1310 (466.2 bits), Expect = 1.1e-133, P = 1.1e-133
 Identities = 254/390 (65%), Positives = 312/390 (80%)

Query:     6 MERSNSKRGLDSSSAE-EGQPDRKR---PALASVIVEALKVDSLQKLCSSLEPILRRVVS 61
             ME S + RG   +    +  P+ KR   PALASVIVEA+KVDSLQ+LCSSLEP+ RR+VS
Sbjct:     1 MENSMNNRGHGHNQEHADNLPESKRQKLPALASVIVEAVKVDSLQRLCSSLEPLFRRIVS 60

Query:    62 EEVERALAKLGPAKLTGRSS-PKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIH 120
             EEVERA+++L  +K T RS+ P +I+G DGRNLQL FRTR+   LFTGGKVEGEQG+AIH
Sbjct:    61 EEVERAISRLENSKSTSRSTEPNKIQGLDGRNLQLRFRTRMPPHLFTGGKVEGEQGSAIH 120

Query:   121 IVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLS 180
             +VLIDANTG+V+ TG ES+ KL++VVL+GDFN+EDD +WT+E F S  VKEREGKRP+L+
Sbjct:   121 VVLIDANTGNVIQTGEESMTKLNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILT 180

Query:   181 GDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDH 240
             GD  V +KEGVGTLG LTFTDNSSWIRSRKFRLG+K A+G+     IREAKT+ F VKDH
Sbjct:   181 GDRHVIIKEGVGTLGKLTFTDNSSWIRSRKFRLGVKPATGF----HIREAKTEPFAVKDH 236

Query:   241 RGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILG 300
             RGELYKKHYPP L+DEVWRL+KI KDG+ HK+L K+ I TVEDFL+++++D Q+LR++LG
Sbjct:   237 RGELYKKHYPPVLHDEVWRLDKIAKDGALHKKLLKSNIVTVEDFLQILMKDPQKLRSLLG 296

Query:   301 SGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSL 360
             SGMSN+MWD  V+HAKTCVL GKLY YY D      VVFN+IYEF GLIA+G + S++SL
Sbjct:   297 SGMSNRMWDNTVEHAKTCVLGGKLYAYYTDQTHQTAVVFNHIYEFQGLIANGHFLSSESL 356

Query:   361 SESQKVHVDTLVKKAYDNWMHVIEYDGKSL 390
             +  QK+  DTLVK AY+NW  V+EY GK L
Sbjct:   357 NHDQKISADTLVKTAYENWHKVVEYGGKLL 386

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS

TAIR|locus:505006222 SARD1 "AT1G73805" [Arabidopsis thaliana (taxid:3702)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 176/394 (44%), Positives = 240/394 (60%)

Query:    15 LDSSSAEEGQPDRKR--PALASVIVEAL-KVDSLQKLCSSLEPILRRVVSEEVERALAKL 71
             LDS    + +   K   P+LAS I      + S   L S LEP++R+VV +EVE  ++K 
Sbjct:    10 LDSDQENKSEKRIKSVLPSLASPISSVFGALISENTLRSVLEPVIRKVVRQEVEYGISKR 69

Query:    72 GPAKLTGRSSPKRIEGPDGRN--LQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTG 129
                +L+ RSS  RIE P+     L+L FR  L  P+FTG K+       + I+L+D +  
Sbjct:    70 --FRLS-RSSSFRIEAPEATTPTLKLIFRKNLMTPIFTGSKISDVDNNPLEIILVDDSNK 126

Query:   130 HVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKE 189
              V    P   +KLD+V L GDF +   D WT +EF S+++KER+GKRPLL+G++ VT++ 
Sbjct:   127 PVNLNRP---IKLDIVALHGDFPS--GDKWTSDEFESNIIKERDGKRPLLAGEVSVTVRN 181

Query:   190 GVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYC-EGIRIREAKTDAFTVKDHRGELYKKH 248
             GV T+G++ FTDNSSWIRSRKFR+G KVA G   +G+ + EA T+A  V+DHRGELYKKH
Sbjct:   182 GVATIGEIVFTDNSSWIRSRKFRIGAKVAKGSSGQGVVVCEAMTEAIVVRDHRGELYKKH 241

Query:   249 YPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMW 308
             +PP L DEVWRLEKIGKDG+FHK+L+   I TV+DFL+L V D   LR ILG GMS++ W
Sbjct:   242 HPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQILGPGMSDRKW 301

Query:   309 DVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHV 368
             +V + HA+ C+L  KLY+     P N  ++ N I E    + DG  H   S     + +V
Sbjct:   302 EVTLKHARECILGNKLYI--SRGP-NFFMILNPICEVMKALIDG--HVLSSQESLNQPYV 356

Query:   369 DTLVKKAYD--NWMHVIEYDGKSLLGFTQNKSVD 400
               LV+ AY   N++ V E         TQ   +D
Sbjct:   357 KNLVRDAYSKGNFLEVGERTANEAALLTQGDDLD 390

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2148548 CBP60G "Cam-binding protein 60-like G" [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 147/371 (39%), Positives = 218/371 (58%)

Query:    35 VIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRN-L 93
             V+ + ++  S  +    +E ++RR+V EE++R+L     +         R E P  R+ L
Sbjct:    28 VVKKVMRDQSNNQFMIQMENMIRRIVREEIQRSLQPFLSSSCVSMER-SRSETPSSRSRL 86

Query:    94 QLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNN 153
             +L F       +FTG K+E E G+ + I L+DA T  +V+TGP S  ++++V L  DF  
Sbjct:    87 KLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFSSSRVELVPLNADFTE 146

Query:   154 EDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTL-GDLTFTDNSSWIRSRKFR 212
             E   +WT E F  +++ +REGKRPLL+GDL V LK GVG + GD+ F+DNSSW RSRKFR
Sbjct:   147 E---SWTVEGFNRNILTQREGKRPLLTGDLTVMLKNGVGVITGDIAFSDNSSWTRSRKFR 203

Query:   213 LGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKR 272
             LG K+     +G    EA+++AF  +D RGE YKKH+PP  +DEVWRLEKI KDG    R
Sbjct:   204 LGAKLTG---DGAV--EARSEAFGCRDQRGESYKKHHPPCPSDEVWRLEKIAKDGVSATR 258

Query:   273 LNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSG-KLYVYYPDD 331
             L +  I TV+DF RL   +   L NI+G+G+S K W+ +V HA  CVL   + Y+Y  + 
Sbjct:   259 LAERKILTVKDFRRLYTVNRNELHNIIGAGVSKKTWNTIVSHAMDCVLDETECYIYNANT 318

Query:   332 PRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLL 391
             P  V ++FN++YE   +  +G     D  +  Q + +D L  +AY N   +   + ++ +
Sbjct:   319 P-GVTLLFNSVYELIRVSFNGN----DIQNLDQPI-LDQLKAEAYQNLNRITAVNDRTFV 372

Query:   392 GFTQNKSVDAP 402
             G  Q +S+  P
Sbjct:   373 GHPQ-RSLQCP 382


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      448       448   0.00091  118 3  11 22  0.43    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  278 KB (2146 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.12u 0.09s 41.21t   Elapsed:  00:00:02
  Total cpu time:  41.13u 0.09s 41.22t   Elapsed:  00:00:02
  Start:  Mon May 20 23:30:10 2013   End:  Mon May 20 23:30:12 2013

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS;IDA

GO:0002237 "response to molecule of bacterial origin" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	448
pfam07887	301	pfam07887, Calmodulin_bind, Calmodulin binding pro	1e-173

>gnl|CDD|219620 pfam07887, Calmodulin_bind, Calmodulin binding protein-like

 Score =  487 bits (1256), Expect = e-173
 Identities = 186/302 (61%), Positives = 233/302 (77%), Gaps = 2/302 (0%)

Query: 92  NLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDF 151
            L+L F  +LSLP+FTG K+E E G  I I L+DANTG  VT+GP S  KL+VVVL GDF
Sbjct: 1   RLKLVFLNKLSLPIFTGSKIEAEDGAPIKIALVDANTG--VTSGPLSSAKLEVVVLHGDF 58

Query: 152 NNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKF 211
           N+EDD+NWT+EEF  ++VKEREGKRPLL+GD+ VTLK GV  +G++ FTDNSSW RSRKF
Sbjct: 59  NSEDDENWTEEEFNKNIVKEREGKRPLLTGDVTVTLKNGVAVIGEIFFTDNSSWTRSRKF 118

Query: 212 RLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHK 271
           RLG +V  G  +G+R+REA T++F VKDHRGELYKKH+PP+L DEVWRLEKIGKDG+FHK
Sbjct: 119 RLGARVVDGSYDGVRVREAVTESFVVKDHRGELYKKHHPPSLEDEVWRLEKIGKDGAFHK 178

Query: 272 RLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDD 331
           RL  +GI TV+DFLRL+ RD  +LR ILGSGMSNKMW+  + HAKTCVL  K Y+Y P  
Sbjct: 179 RLTASGINTVKDFLRLLHRDPNKLRQILGSGMSNKMWETTISHAKTCVLGDKCYIYRPAS 238

Query: 332 PRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLL 391
            +NVG+ FN++YE  G+  DG Y  A++LSE Q+  V+ LVK+AY NW ++ EYD + L 
Sbjct: 239 EKNVGLFFNSVYELVGVSFDGSYVPANNLSELQQAAVNQLVKQAYQNWNNIEEYDHEMLN 298

Query: 392 GF 393
            +
Sbjct: 299 NY 300

The members of this family are putative or actual calmodulin binding proteins expressed by various plant species. Some members , are known to be involved in the induction of plant defence responses. However, their precise function in this regards is as yet unknown. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	448
PF07887	299	Calmodulin_bind: Calmodulin binding protein-like;	100.0
TIGR02239	316	recomb_RAD51 DNA repair protein RAD51. This eukary	88.76
TIGR02238	313	recomb_DMC1 meiotic recombinase Dmc1. This model d	87.0
PLN03186	342	DNA repair protein RAD51 homolog; Provisional	86.8
PRK04301	317	radA DNA repair and recombination protein RadA; Va	81.96
PLN03187	344	meiotic recombination protein DMC1 homolog; Provis	81.86

>PF07887 Calmodulin_bind: Calmodulin binding protein-like; InterPro: IPR012416 The members of this family are putative or actual calmodulin binding proteins expressed by various plant species

Probab=100.00  E-value=2.3e-125  Score=931.57  Aligned_cols=299  Identities=69%  Similarity=1.159  Sum_probs=294.9

Q ss_pred             ceEEEEcCCCCCCcccCCceeccCCCceEEEEEeCCCCceeccCCCccceEEEEEeeCCCCCCCCCCCCHHHHhhccccc
Q 013185           92 NLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKE  171 (448)
Q Consensus        92 ~~~L~F~n~l~~pifTg~kI~a~~g~~I~V~L~D~~t~~iVt~Gplss~kvEIvVLdGDF~~~~~e~WT~eEF~~~IV~~  171 (448)
                      +|||+|+|+|++|||||++|+|+||+||+|+|+|++|+  |++||+|++|||||||||||+++++++||+|||++|||++
T Consensus         1 ~~~L~F~n~l~~pifT~~~i~a~~g~~i~V~l~d~~~~--v~~g~lss~kieIvvLdGdF~~~~~~~wT~eeF~~~iv~~   78 (299)
T PF07887_consen    1 NLQLRFLNKLSLPIFTGSKIEAEDGAPIKVALVDANTG--VTSGPLSSAKIEIVVLDGDFNDEDCEDWTEEEFNSHIVKE   78 (299)
T ss_pred             CeEEEecCCCCCCcccCCceEecCCCcEEEEEEECCCC--ccCCCCCCcEEEEEEEccccCCCccCCCCHHHHhhcEeec
Confidence            58999999999999999999999999999999999988  9999999999999999999999999999999999999999


Q ss_pred             CCCCCcccceeeEEEecCceeeccCceeecCCccccccccEEEEEeecCCCCcceeeeeeccceEEeecCCcccccCCCC
Q 013185          172 REGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPP  251 (448)
Q Consensus       172 ReGk~pLL~Gdl~v~L~~Gva~l~di~FTDnSsw~rSrKFRLgaRv~~~~~~g~RI~EAvsE~FvVkDhRge~ykKh~pP  251 (448)
                      |+||+|||+|+++|+|+||+|+|+||+|||||||+|||||||||||+++++.|+|||||+||||+|||||||+|||||||
T Consensus        79 r~gk~pLL~G~~~v~L~~G~a~l~di~FtdnSs~~rsrKFRLgarv~~~~~~~~rI~Eavse~FvVkd~Rge~~kKh~pP  158 (299)
T PF07887_consen   79 REGKRPLLTGDLQVTLKNGVATLGDISFTDNSSWIRSRKFRLGARVVSGSCDGVRIREAVSEPFVVKDHRGELYKKHYPP  158 (299)
T ss_pred             CCCCCCCCCccEEEEecCCEEEccccEEecCcccccCCcEEEEEEEccCCCCCceeEEeeecCEEEEecccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccceeeeeecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcccccCCceEEEecCC
Q 013185          252 ALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDD  331 (448)
Q Consensus       252 ~L~DeVwRLekIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~k~y~y~~~~  331 (448)
                      +|+|||||||||||||+|||+|+++||+||+|||+|+++||++||+|||+|||++||++||+|||||++++++|+|| .+
T Consensus       159 ~L~DeVwRLe~Igk~G~~hk~L~~~~I~tV~dFl~l~~~d~~~Lr~ilg~~ms~k~We~~v~HA~tCvl~~~~y~y~-~~  237 (299)
T PF07887_consen  159 SLDDEVWRLEKIGKDGAFHKRLKKNGINTVEDFLKLLNKDPQKLREILGSGMSNKMWETTVEHAKTCVLGDKLYVYY-DE  237 (299)
T ss_pred             CCCCchhhhhhccccCHHHHHHHHcCCccHHHHHHHHhcCHHHHHHHHhcCCChhhHHHHHHHHHhcCCCCcEEEEE-ec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999 55


Q ss_pred             CCcEEEEEccccceeeeeeCCeeecCCCCChHhHHHHHHHHHHHHhhccceeeecccccCCC
Q 013185          332 PRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGF  393 (448)
Q Consensus       332 ~~nv~l~FN~i~~lvG~~~~g~y~~~d~L~~~qk~~V~~Lk~~AY~~~~~~~~~d~~~~~~~  393 (448)
                      ++|++|+|||||+||||.|+|+|++.|+||+.||++|++||++||+||++|++||++|++|+
T Consensus       238 ~~nv~l~FN~i~~lvga~~~g~y~s~d~L~~~qK~~v~~Lv~~AY~n~~~l~e~d~~~~~n~  299 (299)
T PF07887_consen  238 EQNVGLFFNCIYELVGAIFGGQYVSLDNLSSAQKAYVDKLVKQAYENWDNLEEYDGKMLNNY  299 (299)
T ss_pred             CCceEEEEcchhhEEeEEECCEEEehHHcCHHHHHHHHHHHHHHHHhhhhheecccchhccC
Confidence            78999999999999999999999999999999999999999999999999999999999986

Some members (for example, Q8H6T7 from SWISSPROT), are known to be involved in the induction of plant defence responses []. However, their precise function in this regard is as yet unknown.

>TIGR02239 recomb_RAD51 DNA repair protein RAD51

Probab=88.76  E-value=0.49  Score=48.18  Aligned_cols=49  Identities=29%  Similarity=0.312  Sum_probs=43.3

Q ss_pred             hhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcccccC
Q 013185          268 SFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLS  321 (448)
Q Consensus       268 ~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~  321 (448)
                      .--++|+++||.||+||+..   +|..|.+++  |+|...++.+..||.+|...
T Consensus        12 ~~~~~l~~~g~~t~~~~~~~---~~~~L~~i~--~ls~~~~~~~~~~~~~~~~~   60 (316)
T TIGR02239        12 ADIKKLQEAGLHTVESVAYA---PKKQLLEIK--GISEAKADKILAEAAKLVPM   60 (316)
T ss_pred             HHHHHHHHcCCCcHHHHHhC---CHHHHHHHh--CCCHHHHHHHHHHHHHhccc
Confidence            34579999999999999876   899999998  89999999999999988653

This eukaryotic sequence family consists of RAD51, a protein involved in DNA homologous recombination and repair. It is similar in sequence the exclusively meiotic recombinase DMC1 (TIGR02238), to archaeal families RadA (TIGR02236) and RadB (TIGR02237), and to bacterial RecA (TIGR02012).

>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1

Probab=87.00  E-value=0.64  Score=47.39  Aligned_cols=49  Identities=27%  Similarity=0.311  Sum_probs=43.3

Q ss_pred             hhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcccccC
Q 013185          268 SFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLS  321 (448)
Q Consensus       268 ~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~  321 (448)
                      .--++|+++||.||+||+..   ++..|.++.  |+|...++.+++.|+.+...
T Consensus        12 ~~~~~L~~~g~~t~~~~~~~---~~~~L~~~~--gls~~~~~~i~~~~~~~~~~   60 (313)
T TIGR02238        12 ADIKKLKSAGICTVNGVIMT---TRRALCKIK--GLSEAKVDKIKEAASKIINP   60 (313)
T ss_pred             HHHHHHHHcCCCcHHHHHhC---CHHHHHHhc--CCCHHHHHHHHHHHHhhhcc
Confidence            45589999999999999876   899999997  89999999999999988654

This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.

>PLN03186 DNA repair protein RAD51 homolog; Provisional

Probab=86.80  E-value=0.5  Score=48.90  Aligned_cols=62  Identities=27%  Similarity=0.314  Sum_probs=49.1

Q ss_pred             cceeeeeecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcccccCC
Q 013185          256 EVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSG  322 (448)
Q Consensus       256 eVwRLekIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~  322 (448)
                      ++-+|+.-|-.-.--++|.++||.||+||+.+   ++..|.+++  |+|....+.+++||.+|....
T Consensus        27 ~~~~l~~~gi~~~~i~kL~~~g~~T~~~~~~~---~~~~L~~i~--~is~~~~~~~~~~~~~~~~~~   88 (342)
T PLN03186         27 PIEQLQASGIAALDIKKLKDAGIHTVESLAYA---PKKDLLQIK--GISEAKVEKILEAASKLVPLG   88 (342)
T ss_pred             cHHHHHhCCCCHHHHHHHHHcCCCcHHHHHhC---CHHHHHHhc--CCCHHHHHHHHHHHHHhcccc
Confidence            34455443344445679999999999999876   889999998  899999999999998886543

>PRK04301 radA DNA repair and recombination protein RadA; Validated

Probab=81.96  E-value=0.92  Score=45.57  Aligned_cols=57  Identities=19%  Similarity=0.304  Sum_probs=45.4

Q ss_pred             cceeeeeecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcccc
Q 013185          256 EVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCV  319 (448)
Q Consensus       256 eVwRLekIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCv  319 (448)
                      ++-.|.+||+  ...++|.++||.|++|++.+   +++.|.+++  |++.+.++.+++-|+.++
T Consensus         7 ~l~~l~gIg~--~~a~~L~~~Gi~t~~dl~~~---~~~~L~~~~--g~~~~~a~~l~~~a~~~~   63 (317)
T PRK04301          7 DLEDLPGVGP--ATAEKLREAGYDTVEAIAVA---SPKELSEAA--GIGESTAAKIIEAAREAA   63 (317)
T ss_pred             cHhhcCCCCH--HHHHHHHHcCCCCHHHHHcC---CHHHHHHhc--CCCHHHHHHHHHHHHHhh
Confidence            3445556664  45589999999999999664   999999998  778889999988887644

>PLN03187 meiotic recombination protein DMC1 homolog; Provisional

Probab=81.86  E-value=1.2  Score=46.36  Aligned_cols=60  Identities=23%  Similarity=0.335  Sum_probs=47.9

Q ss_pred             cceeeeeecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhccccc
Q 013185          256 EVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVL  320 (448)
Q Consensus       256 eVwRLekIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl  320 (448)
                      ++..|+.-|-.-.--++|.++||+||+|++..   ++..|-++.  |+|...++.+++.|+..+.
T Consensus        30 ~~~~l~~~g~~~~~~~kL~~~g~~tv~~~~~~---~~~~L~~~~--g~s~~~~~ki~~~a~~~~~   89 (344)
T PLN03187         30 SIDKLISQGINAGDVKKLQDAGIYTCNGLMMH---TKKNLTGIK--GLSEAKVDKICEAAEKLLN   89 (344)
T ss_pred             CHHHHhhCCCCHHHHHHHHHcCCCcHHHHHhC---CHHHHHHhc--CCCHHHHHHHHHHHHHhhc
Confidence            35666554444456689999999999999876   788899986  8999999999999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	448
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 54/400 (13%), Positives = 111/400 (27%), Gaps = 135/400 (33%)

Query: 42  VDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDG--RNLQLHFRT 99
           ++ LQKL   ++P      +   + +            +   RI       R L      
Sbjct: 199 LEMLQKLLYQIDPNW----TSRSDHS-----------SNIKLRIHSIQAELRRLLKSKPY 243

Query: 100 RLSLPLFTGGKVEGEQGTAIHIVLID-ANTGHV----------VTTGPESLVKLDVVVLE 148
              L                 +VL++  N              +TT  + +   D +   
Sbjct: 244 ENCL-----------------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVT--DFLSAA 284

Query: 149 GDFN---NEDDDNWTQEE-------FVSHVVKE--REGKR--PLLSGDLQVTLKEGVGTL 194
              +   +      T +E       ++    ++  RE     P     +  ++++G+ T 
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 195 GDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKK------- 247
                 DN  W      +L             I E+  +     ++R +++ +       
Sbjct: 345 ------DN--WKHVNCDKL-----------TTIIESSLNVLEPAEYR-KMFDRLSVFPPS 384

Query: 248 -HYPPALNDEVWRLEKIGKD-----GSFHKRL-----NKAGIFTVEDF---LRLVVRDSQ 293
            H P  L   +W  + I  D        HK        K    ++      L++ + +  
Sbjct: 385 AHIPTILLSLIW-FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY 443

Query: 294 RLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQ 353
            L               +VDH         +   +  D      +    Y   G      
Sbjct: 444 ALHRS------------IVDHY-------NIPKTFDSDDLIPPYLDQYFYSHIG------ 478

Query: 354 YHSADSLSESQKVHVDTLVKKAY-D-NWMHV-IEYDGKSL 390
           +H    L   +     TL +  + D  ++   I +D  + 
Sbjct: 479 HH----LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	448
1wcn_A	70	Transcription elongation protein NUSA; RNA-binding	92.48
2kz3_A	83	Putative uncharacterized protein RAD51L3; RAD51D,	91.11

>1wcn_A Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B

Probab=92.48  E-value=0.03  Score=44.32  Aligned_cols=62  Identities=24%  Similarity=0.424  Sum_probs=51.1

Q ss_pred             CCccceeeeeecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhcc-cccC
Q 013185          253 LNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKT-CVLS  321 (448)
Q Consensus       253 L~DeVwRLekIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAkt-Cvl~  321 (448)
                      ..|++-.|++|+..-.  ++|.++||+||+|+..+   +++.|-.|.  |+|...=+.++.-|+. |-+.
T Consensus         5 ~~~~l~~L~Gi~~~~~--~kL~e~Gi~TvedlA~~---~~~eL~~i~--gise~kA~~ii~aAr~~~w~~   67 (70)
T 1wcn_A            5 PADDLLNLEGVDRDLA--FKLAARGVCTLEDLAEQ---GIDDLADIE--GLTDEKAGALIMAARNICWFG   67 (70)
T ss_dssp             CCHHHHSSTTCCHHHH--HHHHTTTCCSHHHHHTS---CHHHHHTSS--SCCHHHHHHHHHHHHHHHTTC
T ss_pred             hhhHHHHcCCCCHHHH--HHHHHcCCCcHHHHHcC---CHHHHHHcc--CCCHHHHHHHHHHHHHccCcc
Confidence            4567778887776544  89999999999997655   888898887  8999999999999998 7553

>2kz3_A Putative uncharacterized protein RAD51L3; RAD51D, homologous recombination, unknown function; NMR {Homo sapiens}

Probab=91.11  E-value=0.14  Score=41.97  Aligned_cols=41  Identities=24%  Similarity=0.205  Sum_probs=31.1

Q ss_pred             hhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHh
Q 013185          269 FHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDH  314 (448)
Q Consensus       269 ~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~H  314 (448)
                      .-++|.+++|.||+||+.+   |+.+|.+++  |+|-+.=-.+..|
T Consensus        16 ~~~~L~~~~I~Tv~Dfl~~---d~~eL~~~~--~ls~~~v~~l~r~   56 (83)
T 2kz3_A           16 MIQLLRSHRIKTVVDLVSA---DLEEVAQKC--GLSYKALVALRRV   56 (83)
T ss_dssp             HHHHHHHTTCCCHHHHTTS---CHHHHHHHH--TCCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCHHHHHhC---CHHHHHHHh--CCCHHHHHHHHHH
Confidence            3478999999999999865   999999999  5665544444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	448
d1jx4a2	240	e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sul	0.003

>d1jx4a2 e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]} Length = 240

class: Multi-domain proteins (alpha and beta)
fold: DNA/RNA polymerases
superfamily: DNA/RNA polymerases
family: Lesion bypass DNA polymerase (Y-family), catalytic domain
domain: DinB homolog (DBH)
species: Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]

 Score = 36.9 bits (84), Expect = 0.003
 Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 225 IRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGK----DGSFHKRLNKAGIFT 280
           + I + K  A    D       K         + R   I           ++L K GI  
Sbjct: 142 VGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINK 201

Query: 281 VEDFLRLVVRDSQRLRNILGSGMSNKMWDVL 311
           + D L +   +  +L+ ++G   +  +  + 
Sbjct: 202 LVDTLSI---EFDKLKGMIGEAKAKYLISLA 229

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	448
d1szpa1	64	DNA repair protein Rad51, N-terminal domain {Baker	91.2

>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.20  E-value=0.036  Score=41.50  Aligned_cols=52  Identities=27%  Similarity=0.313  Sum_probs=43.2

Q ss_pred             eecccchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHcCCCCchhHHHHHHhhccccc
Q 013185          262 KIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVL  320 (448)
Q Consensus       262 kIgKdG~~hkrL~~~~I~tV~dFL~l~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl  320 (448)
                      +||...+  ++|.++|++||++..   +..++.|-+|-  |++.+.=+.+++-|+.++.
T Consensus        10 Gig~~~~--~kL~~aG~~Tve~ia---~~t~~~L~~i~--Gi~e~~a~KIi~~A~k~~~   61 (64)
T d1szpa1          10 GITMADV--KKLRESGLHTAEAVA---YAPRKDLLEIK--GISEAKADKLLNEAARLVP   61 (64)
T ss_dssp             TCCHHHH--HHHHTTSCCSHHHHH---HSCSHHHHTST--TCCHHHHHHHHHHHHHHSC
T ss_pred             CCCHHHH--HHHHHcCCCcHHHHH---hCCHHHHHHcC--CCCHHHHHHHHHHHHHHcC
Confidence            5665544  899999999999975   45788888885  8999999999999998764