Citrus Sinensis ID: 013246

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
MASTEPWLMENGSVKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTGTVFRA
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
cccccccEEEccccccccHHHccccccccccccHcccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHEEHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccEccccccccEEEEc
mastepwlmengsvkVLSKEIrhgrtahnmsssslrkksdltlvskirfpCLRRCLANIQEVILGtklsvlfpaiplaiigqcfgfaEPWVFALSLLGLTPLAERVSFLTEQIafytgptvggllnatcgNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRkeqkydrkqADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHreffeaqedseddddvteetpviGFWSGFAWLVGMTAIIALLSEFVVGTiedasnswgisVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFtlqdgtshyMKGFVLLLCYFVIGacffvsnrpldsdpngvkmglqsstgtvfra
mastepwlmengsVKVLSKEIRHgrtahnmsssslrkksdltLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNrpldsdpngvkmglqsstgtvfra
MASTEPWLMENGSVKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYsllgsilsnlllvlgtslFCGGIANLRKEQKYDRKQADVNSlllllallchmlpllFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFeaqedseddddvteeTPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSlalaiiataftlQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTGTVFRA
****************************************LTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFE*************ETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSN************************
*************************************************PCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRP**********************
MASTEPWLMENGSVKVLSKEIRHG************KKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFE*************ETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTGTVFRA
*****************************************TLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEA**************PVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTGTVFR*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
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MASTEPWLMENGSVKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTGTVFRA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query447 2.2.26 [Sep-21-2011]
Q93Z81459 Vacuolar cation/proton ex yes no 0.984 0.958 0.719 1e-173
Q39253463 Vacuolar cation/proton ex no no 0.982 0.948 0.697 1e-171
Q769E5451 Vacuolar cation/proton ex yes no 0.961 0.953 0.664 1e-152
Q945S5446 Vacuolar cation/proton ex no no 0.930 0.932 0.613 1e-146
Q5TKG3453 Vacuolar cation/proton ex no no 0.935 0.922 0.606 1e-131
Q5KTQ9450 Vacuolar cation/proton ex no no 0.832 0.826 0.597 1e-113
Q8L783441 Vacuolar cation/proton ex no no 0.912 0.925 0.483 1e-101
Q39254441 Vacuolar cation/proton ex no no 0.899 0.911 0.487 1e-99
Q6K1C4417 Vacuolar cation/proton ex no no 0.845 0.906 0.494 5e-95
Q9LFZ8448 Putative vacuolar cation/ no no 0.809 0.808 0.502 1e-93
>sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 Back     alignment and function desciption
 Score =  606 bits (1563), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 329/457 (71%), Positives = 375/457 (82%), Gaps = 17/457 (3%)

Query: 5   EPW--LMENGSVKVL----SKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLAN 58
           EPW  + ENG+  V     S+E+RHGRTAHNMSSSSLRKKSDL LV K+    L+  L+N
Sbjct: 6   EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSN 65

Query: 59  IQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTG 118
           +QEVILGTKL++LF AIPLAI+   + +  P +F LSL+GLTPLAERVSFLTEQ+AFYTG
Sbjct: 66  LQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTG 125

Query: 119 PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANL 178
           PTVGGLLNATCGNATELIIAI AL   K+ VVKYSLLGSILSNLLLVLGTSLF GGIAN+
Sbjct: 126 PTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANI 185

Query: 179 RKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAA---SSDITAKATLQLSRASSIVML 235
           R+EQ++DRKQADVN  LLL+ LLCH+LPLL KYAA    S+ +  K +L LSR SSIVML
Sbjct: 186 RREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVML 245

Query: 236 IGYFAYLVFQLWTHREFFE---AQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLS 292
           I Y AYL+FQLWTHR+ FE     +D+ DD+   EETPVIGFWSGFAWLVGMT +IALLS
Sbjct: 246 IAYIAYLIFQLWTHRQLFEAQQDDDDAYDDEVSVEETPVIGFWSGFAWLVGMTIVIALLS 305

Query: 293 EFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ 352
           E+VV TIEDAS+SWG+SVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ
Sbjct: 306 EYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ 365

Query: 353 IAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCY 412
           I++FVVPL VI++WI+GI MDLNFN+LET SLALAII TAFTLQDGTSHYMKG VLLLCY
Sbjct: 366 ISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCY 425

Query: 413 FVIGACFFVSNRPLDSDPNGVKMGLQ--SSTGTVFRA 447
            +I ACFFV   P    PN + +GLQ  ++ G VF A
Sbjct: 426 VIIAACFFVDQIP---QPNDLDVGLQPMNNLGEVFSA 459
Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity). Involved in ion homeostasis in association with CAX1.
Arabidopsis thaliana (taxid: 3702)
>sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 Back     alignment and function description
>sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 Back     alignment and function description
>sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 Back     alignment and function description
>sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 Back     alignment and function description
>sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 Back     alignment and function description
>sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 Back     alignment and function description
>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 Back     alignment and function description
>sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 Back     alignment and function description
>sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
255574373449 Vacuolar cation/proton exchanger 1a, put 0.979 0.975 0.804 0.0
356506617451 PREDICTED: vacuolar cation/proton exchan 0.975 0.966 0.756 0.0
222354619450 calcium antiporter 1 [Malus x domestica] 0.995 0.988 0.772 0.0
224090994431 Ca2+ antiporter/cation exchanger [Populu 0.953 0.988 0.751 0.0
224140415432 Ca2+ antiporter/cation exchanger [Populu 0.959 0.993 0.753 0.0
356496231456 PREDICTED: vacuolar cation/proton exchan 0.964 0.945 0.743 0.0
359481659448 PREDICTED: vacuolar cation/proton exchan 0.997 0.995 0.770 0.0
449461777447 PREDICTED: vacuolar cation/proton exchan 0.993 0.993 0.782 0.0
356521008449 PREDICTED: vacuolar cation/proton exchan 0.991 0.986 0.744 0.0
357468837456 Vacuolar cation/proton exchanger [Medica 0.991 0.971 0.742 1e-178
>gi|255574373|ref|XP_002528100.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] gi|223532489|gb|EEF34279.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/440 (80%), Positives = 396/440 (90%), Gaps = 2/440 (0%)

Query: 5   EPWLMENGSVKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVIL 64
           EPWL+E+G++K LSKE+RHGRTAHNMSSSSLRKKSDLTLVSK+R   LR  LAN+QEVIL
Sbjct: 10  EPWLLEHGNLKGLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKLRCGLLRNLLANLQEVIL 69

Query: 65  GTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGL 124
           GTKLSVLFPAIPLAI+ QC+GF  PW+FALSLLGLTPLAERVSFLTEQIA++TGPTVGGL
Sbjct: 70  GTKLSVLFPAIPLAIVAQCYGFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGL 129

Query: 125 LNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKY 184
           LNATCGNATELIIAIFAL   KI VVKYSLLGSILSNLLLVLGTSLFCGGIANL +EQKY
Sbjct: 130 LNATCGNATELIIAIFALSQHKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANLGQEQKY 189

Query: 185 DRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 244
           DRKQADVN++LLLL LLCHMLPLLF  A AS+ +TA  TL+LSRASS+VML+ Y AY+ F
Sbjct: 190 DRKQADVNTMLLLLGLLCHMLPLLFGIAGASASLTAVPTLELSRASSLVMLVAYIAYIFF 249

Query: 245 QLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASN 304
           QL THR+ FEA E+S+D D+V EETPVIGFWSG AWLVGMTA+IALLSE+VVGTIEDAS+
Sbjct: 250 QLVTHRQLFEAPEESQDGDEV-EETPVIGFWSGIAWLVGMTAVIALLSEYVVGTIEDASD 308

Query: 305 SWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVII 364
           SWG+SVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQI++FVVPLCVI+
Sbjct: 309 SWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCVIV 368

Query: 365 SWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNR 424
           SWI+GI MDLNFNLLETG+LAL+IIATAFTLQDGTSHY+KG  LLLCY VIGACFFVS  
Sbjct: 369 SWIIGIKMDLNFNLLETGTLALSIIATAFTLQDGTSHYLKGLSLLLCYIVIGACFFVSKT 428

Query: 425 PLDSDPNGVKMGLQSSTGTV 444
           PL+   N V +G+ ++ G +
Sbjct: 429 PLNQG-NVVNLGVNAAPGVL 447

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356506617|ref|XP_003522074.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] Back     alignment and taxonomy information
>gi|222354619|gb|ACM48123.1| calcium antiporter 1 [Malus x domestica] gi|223587975|gb|ACM48122.1| calcium antiporter 1 [Malus x domestica] Back     alignment and taxonomy information
>gi|224090994|ref|XP_002309138.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222855114|gb|EEE92661.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224140415|ref|XP_002323578.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222868208|gb|EEF05339.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356496231|ref|XP_003516972.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] Back     alignment and taxonomy information
>gi|359481659|ref|XP_002274791.2| PREDICTED: vacuolar cation/proton exchanger 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461777|ref|XP_004148618.1| PREDICTED: vacuolar cation/proton exchanger 1-like [Cucumis sativus] gi|449518469|ref|XP_004166264.1| PREDICTED: vacuolar cation/proton exchanger 1-like [Cucumis sativus] gi|402797827|gb|AFQ99295.1| cation exchanger CAX3 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356521008|ref|XP_003529150.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] Back     alignment and taxonomy information
>gi|357468837|ref|XP_003604703.1| Vacuolar cation/proton exchanger [Medicago truncatula] gi|355505758|gb|AES86900.1| Vacuolar cation/proton exchanger [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
TAIR|locus:2074348459 CAX3 "cation exchanger 3" [Ara 0.984 0.958 0.619 8.3e-138
TAIR|locus:2020462441 CAX5 "cation exchanger 5" [Ara 0.832 0.843 0.452 1.5e-76
TAIR|locus:2088130441 CAX2 "cation exchanger 2" [Ara 0.823 0.834 0.451 2.7e-75
CGD|CAL0005539416 VCX1 [Candida albicans (taxid: 0.440 0.473 0.350 5.3e-49
UNIPROTKB|G4NIP8611 MGG_04159 "Calcium-proton exch 0.333 0.243 0.393 9.5e-49
ASPGD|ASPL0000052404434 vcxA [Emericella nidulans (tax 0.785 0.808 0.333 1.8e-48
SGD|S000002286411 VCX1 "Vacuolar membrane antipo 0.845 0.919 0.320 9.8e-48
GENEDB_PFALCIPARUM|PFF0170w441 PFF0170w "calcium antiporter, 0.843 0.854 0.301 2e-47
UNIPROTKB|C6KSN3441 PFF0170w "Calcium antiporter, 0.843 0.854 0.301 2e-47
UNIPROTKB|G4NFU3782 MGG_08710 "Vacuolar calcium io 0.319 0.182 0.441 4e-47
TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1349 (479.9 bits), Expect = 8.3e-138, P = 8.3e-138
 Identities = 283/457 (61%), Positives = 324/457 (70%)

Query:     5 EPW--LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLAN 58
             EPW  + ENG+  V +K    E+RHGRTAHNMSSSSLRKKSDL LV K+    L+  L+N
Sbjct:     6 EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSN 65

Query:    59 IQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTG 118
             +QEVILGTKL++LF AIPLAI+   + +  P +F LSL+GLTPLAERVSFLTEQ+AFYTG
Sbjct:    66 LQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTG 125

Query:   119 PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANL 178
             PTVGGLLNATCGNATELIIAI AL   K+ VVKY                  F GGIAN+
Sbjct:   126 PTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANI 185

Query:   179 RKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAA---SSDITAKATLQLSRASSIVML 235
             R+EQ++DRKQADVN                 KYAA    S+ +  K +L LSR SSIVML
Sbjct:   186 RREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVML 245

Query:   236 IGYFAYLVFQLWTHREFFXXXXXXXXXXXXXXX---TPVIGFWSGFAWLVGMTAIIALLS 292
             I Y AYL+FQLWTHR+ F                  TPVIGFWSGFAWLVGMT +IALLS
Sbjct:   246 IAYIAYLIFQLWTHRQLFEAQQDDDDAYDDEVSVEETPVIGFWSGFAWLVGMTIVIALLS 305

Query:   293 EFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ 352
             E+VV TIEDAS+SWG+SVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ
Sbjct:   306 EYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ 365

Query:   353 IAVFVVPLCVIISWIMGITMDLNFNLLETGSXXXXXXXXXXXXQDGTSHYMKGFVLLLCY 412
             I++FVVPL VI++WI+GI MDLNFN+LET S            QDGTSHYMKG VLLLCY
Sbjct:   366 ISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCY 425

Query:   413 FVIGACFFVSNRPLDSDPNGVKMGLQ--SSTGTVFRA 447
              +I ACFFV   P    PN + +GLQ  ++ G VF A
Sbjct:   426 VIIAACFFVDQIP---QPNDLDVGLQPMNNLGEVFSA 459
GO:0006812 "cation transport" evidence=IEA;ISS
GO:0008324 "cation transmembrane transporter activity" evidence=IEA
GO:0015368 "calcium:cation antiporter activity" evidence=ISS
GO:0015491 "cation:cation antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0015369 "calcium:hydrogen antiporter activity" evidence=ISS;IMP;IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0006793 "phosphorus metabolic process" evidence=IGI
GO:0006814 "sodium ion transport" evidence=IGI
GO:0006874 "cellular calcium ion homeostasis" evidence=IGI
GO:0006882 "cellular zinc ion homeostasis" evidence=IGI;RCA
GO:0010351 "lithium ion transport" evidence=IGI
GO:0030026 "cellular manganese ion homeostasis" evidence=IGI
GO:0051592 "response to calcium ion" evidence=IMP
GO:0009624 "response to nematode" evidence=IEP;RCA
GO:0005515 "protein binding" evidence=IPI
GO:0055062 "phosphate ion homeostasis" evidence=IGI
GO:0006816 "calcium ion transport" evidence=RCA
TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFF0170w PFF0170w "calcium antiporter, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|C6KSN3 PFF0170w "Calcium antiporter, putative" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q769E5CAX1A_ORYSJNo assigned EC number0.66430.96190.9534yesno
Q93Z81CAX3_ARATHNo assigned EC number0.71990.98430.9586yesno
Q99385VCX1_YEASTNo assigned EC number0.37690.84560.9197yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
TIGR00846365 TIGR00846, caca2, calcium/proton exchanger 1e-148
TIGR00378349 TIGR00378, cax, calcium/proton exchanger (cax) 2e-88
COG0387368 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t 4e-72
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 8e-20
COG0530320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 2e-15
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 6e-13
TIGR00367307 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang 9e-08
COG0530 320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 3e-07
>gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger Back     alignment and domain information 
 Score =  425 bits (1095), Expect = e-148
 Identities = 217/367 (59%), Positives = 273/367 (74%), Gaps = 7/367 (1%)

Query: 56  LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAF 115
           L+ +QEVILG+ L++L   +P AII   +G+++  +F L+LLG+ PLAERVSF TEQ+A 
Sbjct: 4   LSVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAH 63

Query: 116 YTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGI 175
             GPT+GGLLNAT GNA ELII++ AL   K++VV+ SLLGSILSNLLLVLG SLF GGI
Sbjct: 64  RLGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGGI 123

Query: 176 ANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVML 235
            N+R EQ+++R  A VNS LLLLA+L  +LPL         D    + L LSR  +IVML
Sbjct: 124 KNIR-EQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQD----SILGLSRGIAIVML 178

Query: 236 IGYFAYLVFQLWTHREFFEAQE--DSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSE 293
           I Y A+LVFQL THR+ FE QE  DS+ DD+V EE  VI  WS  AWLVG T ++ALL+E
Sbjct: 179 ILYGAFLVFQLVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVALLAE 238

Query: 294 FVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQI 353
           ++V TIE A  SWG+SV+FI +IL PIVGNAAEHAGA+I AFKNKLDI+LGVALGSA QI
Sbjct: 239 YLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQI 298

Query: 354 AVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYF 413
           A+FVVP+ V+++W++GI MDLNF   ET +LAL++  T  TLQDG S+Y++G VLL  Y 
Sbjct: 299 ALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYLEGAVLLALYI 358

Query: 414 VIGACFF 420
           +I   FF
Sbjct: 359 IIAMLFF 365

The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365
>gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) Back     alignment and domain information
>gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 447
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 100.0
TIGR00378349 cax calcium/proton exchanger (cax). 100.0
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 100.0
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 100.0
PRK10599366 calcium/sodium:proton antiporter; Provisional 100.0
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 100.0
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 100.0
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 100.0
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.97
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.96
PLN03151650 cation/calcium exchanger; Provisional 99.91
PRK10734 325 putative calcium/sodium:proton antiporter; Provisi 99.79
TIGR00367 307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.76
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.74
TIGR00927 1096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.72
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 99.7
COG0530 320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 99.69
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.57
PLN03151 650 cation/calcium exchanger; Provisional 99.51
KOG1307 588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.49
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.45
TIGR00378 349 cax calcium/proton exchanger (cax). 99.44
TIGR00846 365 caca2 calcium/proton exchanger. This model is gene 99.42
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.15
PRK10599366 calcium/sodium:proton antiporter; Provisional 98.37
KOG2399 605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 98.16
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 98.05
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 97.69
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 97.68
KOG1397 441 consensus Ca2+/H+ antiporter VCX1 and related prot 97.15
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-92  Score=695.62  Aligned_cols=423  Identities=58%  Similarity=0.936  Sum_probs=392.2

Q ss_pred             CCCCc--cccCCC----cccchhhhhccccccCCCCcccccccccccccccchhhhHHHHhhhhHhhcchhhHHHHHHHH
Q 013246            3 STEPW--LMENGS----VKVLSKEIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIP   76 (447)
Q Consensus         3 ~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vp   76 (447)
                      .++||  ..|||+    .|....+.++.++.+++.++..+||++....++.+++.+++...++|+++.++|+|.+++|+|
T Consensus         4 ~~~~~~~i~e~~~~~~~~~~~~~~l~~~~s~~~~~~s~~~~k~~l~~~~~~~w~~~k~~~~~l~~Vll~~~l~~lf~f~p   83 (441)
T KOG1397|consen    4 VPEPWSLIAEHGRANPLAKGFKRELRAGRSAHNMASSLLEKKSLLSLIKHAPWKYLKNVLTNLQEVLLSTKLNLLFPFVP   83 (441)
T ss_pred             ccccHHHHHHhcCCCccccccchhhhccccccchhHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            35788  588887    466677888999999999999999998888889999999999999999999999999999999


Q ss_pred             HHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhccchhHHHHHHHHhhCCCcceeehhhhh
Q 013246           77 LAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLG  156 (447)
Q Consensus        77 ~~~~~~~~~~~~~~~F~~~~l~iipla~~l~~~~e~la~~~G~~vgGll~a~~gn~pElivsi~Al~~g~~~iv~gsilG  156 (447)
                      +++.+|++.|+..|+|.+|+++|+|+|+++++++||+|.++|+++||++||+|||+.|+|++++|+++|+.++||++++|
T Consensus        84 l~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLG  163 (441)
T KOG1397|consen   84 LAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLG  163 (441)
T ss_pred             HHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc---ccccccccchhhhHHH
Q 013246          157 SILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSD---ITAKATLQLSRASSIV  233 (447)
Q Consensus       157 Sil~nlllvlG~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~---~~~~~~~~ls~~~sii  233 (447)
                      |+++|+|+|+|+|+++||++  ||+|+||++.+++++.|+.++++++++|++++++.....   ...+..+.+||.+|++
T Consensus       164 SILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~Siv  241 (441)
T KOG1397|consen  164 SILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIV  241 (441)
T ss_pred             HHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHH
Confidence            99999999999999999998  799999999999999999999999999999999854211   1223468999999999


Q ss_pred             HHHHHHHHHHHHHHhhh--hhhccccCCC--CCCC--ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC
Q 013246          234 MLIGYFAYLVFQLWTHR--EFFEAQEDSE--DDDD--VTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWG  307 (447)
Q Consensus       234 Ll~~Y~~yl~f~l~th~--~~f~~~~~~~--~~~~--~~~~~~~~~~~~~i~~L~~~~~li~~~a~~lV~si~~i~~~~g  307 (447)
                      |+++|++|+|||+|+||  ..|+.++++|  .||+  ++||.|.+++|++++||++.|++++++||++|+++|++++.+|
T Consensus       242 mliaYi~~L~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~  321 (441)
T KOG1397|consen  242 MLIAYIAYLWFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWG  321 (441)
T ss_pred             HHHHHHHHHHHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999966  4444333322  1121  3567789999999999999999999999999999999999999


Q ss_pred             CCcchhhheehhcccchhhHHHHHHHHHhCCCcchHHHHHhHHHHHHHHHHHHHHHHHhhcCccccccchhHHHHHHHHH
Q 013246          308 ISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALA  387 (447)
Q Consensus       308 is~~fiGlillpi~tslpE~~~ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~~~~~~~l~ls  387 (447)
                      +|++|+|+|++|+++|++||++||.+|.|||+|+++|+++||++|+++|++|+.++++|.+|++|+++|+.+|+.+++++
T Consensus       322 ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~is  401 (441)
T KOG1397|consen  322 LSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFIS  401 (441)
T ss_pred             CChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHccCCCC
Q 013246          388 IIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLD  427 (447)
Q Consensus       388 vll~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~~~~~  427 (447)
                      +++++|+++||++||+||.+|+++|++++++||++++|++
T Consensus       402 Vfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff~~~~~~~  441 (441)
T KOG1397|consen  402 VFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFFVYNDPSQ  441 (441)
T ss_pred             HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence            9999999999999999999999999999999999999973

>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 3e-10
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 Back     alignment and structure
 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 52/287 (18%)

Query: 134 ELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRKQADVNS 193
           E++ + +A Y     +   + +GS + N+ LVLG S     I   +  QK          
Sbjct: 54  EILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLSAIISPIIVDKNLQKNI-------L 106

Query: 194 LLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTHREFF 253
           + LL  +   ++                     S    +V+LI +  YL + +       
Sbjct: 107 VYLLFVIFAAVI----------------GIDGFSWIDGVVLLILFIIYLRWTVKNGSA-- 148

Query: 254 EAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFI 313
                   + +   +            L+     + + +E  V   +  + +  IS   I
Sbjct: 149 --------EIEENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVI 200

Query: 314 SIIL------LPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWI 367
              L      LP      E   ++  A +N   + LG  +GS        + +  +   +
Sbjct: 201 GFTLVAFGTSLP------ELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFMHL 254

Query: 368 MGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFV 414
               + +   ++   SL L + A    +        +G + L  Y +
Sbjct: 255 PAENVQMAVLVI--MSLLLYLFAKYSKI-----GRWQGILFLALYII 294

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 100.0
3v5u_A 320 Uncharacterized membrane protein MJ0091; lipid cub 99.8
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
Probab=100.00  E-value=5.6e-47  Score=378.51  Aligned_cols=293  Identities=18%  Similarity=0.161  Sum_probs=241.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--Ccccchhhhhcc-chhHHHHHHHHhhCCCcceeehhhhhHHHHHHHHH
Q 013246           89 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV  165 (447)
Q Consensus        89 ~~~F~~~~l~iipla~~l~~~~e~la~~~G--~~vgGll~a~~g-n~pElivsi~Al~~g~~~iv~gsilGSil~nlllv  165 (447)
                      ...|++++++++++++++++++|++|+++|  |.+.|++++++| |+||+++++.|..+|++|+++||++|||++|++++
T Consensus         6 ~~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillv   85 (320)
T 3v5u_A            6 VGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLV   85 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHH
Confidence            346789999999999999999999999999  899999999999 79999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccchhhhHHHHHHHHHHHHHHH
Q 013246          166 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ  245 (447)
Q Consensus       166 lG~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~~~~~~~~~ls~~~siiLl~~Y~~yl~f~  245 (447)
                      +|++.++++++   .++.+. ++.    .+++++++.+ ++.           ..+  . ++|+++++|+..|+.|++|+
T Consensus        86 lG~~~li~p~~---v~~~~~-~d~----~~~l~~~~~l-~~~-----------~~~--g-is~~~g~~Ll~~Y~~yl~~~  142 (320)
T 3v5u_A           86 LGLSAIISPII---VDKNLQ-KNI----LVYLLFVIFA-AVI-----------GID--G-FSWIDGVVLLILFIIYLRWT  142 (320)
T ss_dssp             HHHHHHHSCBC---CCHHHH-HHH----HHHHHHHHHH-HHH-----------TTT--C-BCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccc---ccHHHH-HHH----HHHHHHHHHH-HHH-----------HHc--c-cHHHHHHHHHHHHHHHHHHH
Confidence            99999998765   333332 331    2223332221 111           122  3 89999999999999999999


Q ss_pred             HHhhhhhhccccCCCCCCCccccCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCCCcchhhheehhcccchh
Q 013246          246 LWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA  325 (447)
Q Consensus       246 l~th~~~f~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~li~~~a~~lV~si~~i~~~~gis~~fiGlillpi~tslp  325 (447)
                      +++|++     +++  |   ++++++.+.++.+.+++++++++..+++++|++++.+++.+|+|+.++|++++|++||+|
T Consensus       143 ~~~~~~-----~~~--~---~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslP  212 (320)
T 3v5u_A          143 VKNGSA-----EIE--E---NNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLP  212 (320)
T ss_dssp             HHHTBC-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHH
T ss_pred             HHhccc-----ccc--c---ccccccccHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccH
Confidence            999865     111  1   112234567888999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCcchHHHHHhHHHHHHHHHHHHHHHHHhhcCccccccchhHHHHHHHHHHHHHHHHHcCCccchHHH
Q 013246          326 EHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKG  405 (447)
Q Consensus       326 E~~~ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~~~~~~~l~lsvll~~~~~~~g~~~~~~G  405 (447)
                      |+++++.++|||+.|+++||++|||+||.++++|+..++.     |++++  .+|...+..+.++..+.++|||++|+||
T Consensus       213 E~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li~-----p~~~~--~~d~~~~l~~~~ll~~~~~~~~i~~~eG  285 (320)
T 3v5u_A          213 ELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFM-----HLPAE--NVQMAVLVIMSLLLYLFAKYSKIGRWQG  285 (320)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHHS-----CBCCC--HHHHHHHHHHHHHHHHHHHHSCBSHHHH
T ss_pred             HHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhhc-----cccch--HHHHHHHHHHHHHHHHHHhCCcCcHHHH
Confidence            9999999999999999999999999999999999998875     44443  5666554444444444778999999999


Q ss_pred             HHHHHHHHH-HHHHHHH
Q 013246          406 FVLLLCYFV-IGACFFV  421 (447)
Q Consensus       406 ~~Ll~~Y~i-~~~~~~~  421 (447)
                      .+|+++|++ |....+.
T Consensus       286 ~~ll~~Y~~~y~~~~~~  302 (320)
T 3v5u_A          286 ILFLALYIIAIASLRMG  302 (320)
T ss_dssp             HHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            999999999 9876553
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00