Citrus Sinensis ID: 013328

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-----
Protein Sequence
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHccccEEEEcccccccccEEEEEEccccEEEEEEEEEccccccHHHHHHccccccccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEEEEccEEcccHHHcccccccccccccccEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccHHcccccccccHcccccccccEEEEEHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEEcccEEEEEEEEEEEcccccHHHHHHHHHHHcccHcccccccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHccccccHHHHccccccccccEEEcccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccHccHHHHEcccccccEEEHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccEccHHHHHHHHHcccccHcHHHccccccccccccccHccccEEEEEEEEccHHHHcccccccccccccccEEEEEcccEccccccc
Coil and Loop (DISEMBL)
MRTKMKGRISRIGSYaisssirdhqqqpcitcttfNILAPIYKrlsnencresdcraYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFklartnnrgdglLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVElidpfsqcrngdlRQEILIVNThllfphdsslslVRLHQVYKILQHVESYqkehnlkpipiilcgdwngskrghVYKFLRsqgfvssydtahqytdadahkwvshrnhrgnicgvdfiwllnpNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFlkadndgdyitySGFCEALEQLNLTghkhgladeetkDLWVQAdidgngvvdYKEFQQRIWKTTWSdqrndlndededgfvkSSLEQTIGfsvknavlfppevekgrwpenyslsdharltvvfspirmpcsrls
Flexible Loop (DISEMBL)
mrtkmkgrisrIGSYAisssirdhqqqpCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKlartnnrgdglLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTtwsdqrndlndEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPenyslsdharltvvfspirmpcsrls
Low Complexity Region (SEG)
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Disordered region (IsUnstruct)
**************YAI***IRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSD*************V**SLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPI********
Disordered Region (DISOPRED)
*****************************ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRA**T**DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS**********************IGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCS***
Disordered Region (DISEMBL)
*********SRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Disordered Region (DISPRO)
*************************QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQR****************EQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPC****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	445	2.2.26 [Sep-21-2011]
O81916	484	Uncharacterized calcium-b	no	no	0.955	0.878	0.635	1e-163
Q9LS39	448	Carbon catabolite repress	no	no	0.355	0.352	0.295	4e-09
Q8W0Z9	602	Carbon catabolite repress	no	no	0.379	0.280	0.273	8e-08
Q8VYU4	754	Carbon catabolite repress	no	no	0.368	0.217	0.270	4e-07
Q0WKY2	454	Carbon catabolite repress	no	no	0.368	0.361	0.270	7e-07
P79942	388	Nocturnin OS=Xenopus laev	N/A	no	0.438	0.502	0.234	2e-05
Q6BMM5	831	Glucose-repressible alcoh	yes	no	0.467	0.250	0.231	2e-05
Q5RGT6	569	Protein angel homolog 2 O	yes	no	0.364	0.284	0.25	3e-05
Q5VTE6	544	Protein angel homolog 2 O	yes	no	0.368	0.301	0.238	3e-05
Q24239	354	Protein angel OS=Drosophi	yes	no	0.364	0.457	0.262	5e-05

>sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2

 Score =  575 bits (1481), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 272/428 (63%), Positives = 337/428 (78%), Gaps = 3/428 (0%)

Query: 17  ISSSIRDHQQQPCITCTTFNILAPIYKRL--SNENCRESDCRAYWFGRNQRILDWLLYER 74
           ++S++     +  I+CTTFNILAPIYKR+   N + RESD R  W  RNQRILD LL++R
Sbjct: 58  LNSNLASSMVESNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLARNQRILDLLLHQR 117

Query: 75  SSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRD 134
           SS+ICLQE WVGNEELV+MY  +LS +GY  ++LARTN+RGDGLLTA+HKD+F+VVNYR+
Sbjct: 118 SSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTAIHKDHFKVVNYRE 177

Query: 135 LLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKI 194
           LLFNDFGDRVAQLLHV+ + PF      D++QE++IVNTHLLFPHDSSLS+VRLHQVYKI
Sbjct: 178 LLFNDFGDRVAQLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDSSLSIVRLHQVYKI 237

Query: 195 LQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWV 254
           L+++E+YQKE+ L  +PIILCGDWNGSKRGHVYKFLRSQGF+SSYD AHQYTD+DAH+WV
Sbjct: 238 LEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDSDAHRWV 297

Query: 255 SHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKAD 314
           SHRNHRGNICGVDFIWL NP+  RK L+ SW EAVF + K  L +AS+ E DAF FL A 
Sbjct: 298 SHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQLHKASIAEDDAFTFLGAK 357

Query: 315 NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT 374
           N  D +TYS FC AL+++NLTG  HGL+ EETK+LWV+AD+DGNGV DY+E  ++IW  T
Sbjct: 358 NHSDSLTYSDFCLALQKVNLTGIPHGLSFEETKELWVRADLDGNGVFDYEEL-KKIWNMT 416

Query: 375 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVF 434
             +Q  +  +   +   +   ++ IG  V  A+LFP E EKG WPENY++SDHA LTV F
Sbjct: 417 MVNQPGNCKESVMESKKEEGEDEAIGLKVNKAILFPQEAEKGLWPENYNISDHACLTVQF 476

Query: 435 SPIRMPCS 442
           SP++M CS
Sbjct: 477 SPVKMLCS 484

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS39|CCR4C_ARATH Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 18/176 (10%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
           W  R + I + L+     II +QE     ++  D++   +  AGY      RT +  DG 
Sbjct: 139 WGYRKRLICEELIRLNPDIISMQEV----DKYFDLFS-MMEKAGYAGSYKRRTGDNVDGC 193

Query: 119 LTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL 176
                 D F V+   ++ F+ FG  D VAQL  +EL       R  +  ++IL+ N H+L
Sbjct: 194 AMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLEL-------RKSNKSRKILLGNIHVL 246

Query: 177 FPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS 232
           +  + +   V+L QV  +        K+     IPI+LCGD+N + +  +Y FL S
Sbjct: 247 Y--NPNQGDVKLGQVRSLCSKAHLLSKKWG--DIPIVLCGDFNSTPKSPLYNFLAS 298

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q8W0Z9|CCR4A_ARATH Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana GN=CCR4-1 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 95/230 (41%), Gaps = 61/230 (26%)

Query: 31  TCTTFNILAPIYKRLSNENCRESDCRAY-------WFGRNQRILDWLLYERSSIICLQEF 83
           T  ++NIL+  Y          SD  +Y       W  R Q +L  ++  R+ I+CLQE 
Sbjct: 249 TVLSYNILSDTYA--------SSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQE- 299

Query: 84  WVGNEELVDMYEKRLSDAGYVNFKLARTN-------NRGDGLLTAVHKDYFRVVNYRDLL 136
            V N+   + +   L   GY      +TN       N  DG  T   +D F  V   ++ 
Sbjct: 300 -VQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVE 358

Query: 137 FNDFGDRVAQLLHVELIDPFSQCRNG---------------------------DLRQEIL 169
           FN    + AQ L  E I P SQ +N                              RQ + 
Sbjct: 359 FN----KAAQSL-TEAIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLC 413

Query: 170 IVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWN 219
           + NTH+  PH+  L  V+L QV+ +L+ +E      +   IP+++CGD+N
Sbjct: 414 VANTHVNVPHE--LKDVKLWQVHTLLKGLEKIAASAD---IPMLVCGDFN 458

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q8VYU4|CCR4F_ARATH Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)

Query: 56  RAYWFGRNQRILDW------LLYERS----SIICLQEFWVGNEELVDMYEKRLSDAGYVN 105
           R+ +F   + +L W      L++E S     I+CLQE     ++  D+ E+ +   GY  
Sbjct: 201 RSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEV----DKFQDL-EEEMKHRGYSA 255

Query: 106 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELI---------D 154
               RT N  DG       + F++V+   + FN  G  D VAQ+  +E +          
Sbjct: 256 IWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLETLLTSHTKENET 315

Query: 155 PFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIIL 214
           P  +   G  R  ++I N H+LF  +      +L QV  +L    +  K  +    PI+L
Sbjct: 316 PPPESSAGSHR--VVICNIHVLF--NPKRGDFKLGQVRTLLDKAHAVSKLWDD--APIVL 369

Query: 215 CGDWNGSKRGHVYKFL 230
           CGD+N + +  +Y F+
Sbjct: 370 CGDFNCTPKSPLYNFI 385

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q0WKY2|CCR4E_ARATH Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 17/181 (9%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
           W  R   I   +    +SI+CLQE      +  D  +  L + G+     +RT    DG 
Sbjct: 130 WSRRKHLICKEISRYNASILCLQEV-----DRFDDLDVLLKNRGFRGVHKSRTGEASDGC 184

Query: 119 LTAVHKDYFRVVNYRDLLFNDFGDR--VAQLLHVEL---IDPFSQ--CRNGDLRQEILIV 171
                ++ F +++++ + F+ FG R  VAQL  +E+    DP S+   R+ D R+ +++ 
Sbjct: 185 AIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRR-LVVG 243

Query: 172 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 231
           N H+LF  +     ++L QV   L+  ++Y+       IP+ + GD N + +  +Y F+ 
Sbjct: 244 NIHVLF--NPKRGDIKLGQVRLFLE--KAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIA 299

Query: 232 S 232
           S
Sbjct: 300 S 300

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|P79942|NOCT_XENLA Nocturnin OS=Xenopus laevis GN=ccrn4l PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 31/226 (13%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLART------- 111
           W  R   IL+ +L  +  ++CLQE     +   D ++  LS  GY    LA+        
Sbjct: 129 WEERKYLILEEILMYQPDVLCLQEV----DHYFDTFQPILSRLGYQCTFLAKPWSPCLDV 184

Query: 112 --NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEIL 169
             NN  DG      +D F++VN   +       R  +   V + +    C  G   +++ 
Sbjct: 185 EHNNGPDGCALFFLQDRFQLVNSAKI---RLSARTLKTNQVAIAETLQCCETG---RQLC 238

Query: 170 IVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKF 229
              THL     +     RL Q   +L ++ES  +      +P+I+CGD+N      VYK 
Sbjct: 239 FAVTHL--KARTGWERFRLAQGSDLLDNLESITQGAT---VPLIICGDFNADPTEEVYKR 293

Query: 230 LRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICG-----VDFIW 270
             S     + ++A++    D      +   +    G     +D+IW
Sbjct: 294 FASSSL--NLNSAYKLLSEDGESEPPYTTWKIRTTGESCHTLDYIW 337

Component of the circadian clock or downstream effector of clock function. Exhibits a high amplitude circadian rhythm with maximal levels in early evening. In constant darkness or constant light, the amplitude of the rhythm decreases.

Xenopus laevis (taxid: 8355)

>sp|Q6BMM5|CCR4_DEBHA Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CCR4 PE=3 SV=2

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 55/263 (20%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY--VNFKLART----- 111
           W  R   + + +L+ +S ++C+QE  V      + +   +   GY  V F   R+     
Sbjct: 510 WGFRRAALQEEVLHFKSDLVCMQE--VETRTFHEFWVPVMQGFGYKGVFFNKTRSKTMSE 567

Query: 112 --NNRGDGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRVAQLLHVELIDPF 156
             + + DG  T    D F +++ ++  +N             D  +R     ++ LI  F
Sbjct: 568 SDSKKVDGCATFYKTDKFELLHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYF 627

Query: 157 SQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN-------LKP 209
           +  + G   ++IL VNTHL +  D + + V+  QV  +L+ + +  K+++       +K 
Sbjct: 628 NHIQTG---EKILFVNTHLHW--DPAFNDVKTLQVGILLEELRTIMKKYHHTNSIDEIKN 682

Query: 210 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH-----QYTDAD---AHKWVSHRNHRG 261
             +++CGD+N +K   VY+ L S G VS+++        ++TD     + K  S  +H G
Sbjct: 683 ASMVICGDFNSTKENAVYQ-LFSTGAVSNHEDLEGRDYGKFTDEGFRHSFKLKSAYDHVG 741

Query: 262 NIC----------GVDFIWLLNP 274
            +            +D+IW   P
Sbjct: 742 ELPFTTISPAFTDAIDYIWYSTP 764

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q5RGT6|ANGE2_DANRE Protein angel homolog 2 OS=Danio rerio GN=angel2 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNNRGDG 117
           W  R   I+  L    + I+CLQE  V  +      +  L   GY   FK  RT  + DG
Sbjct: 229 WRNRFPNIIKELEQYSADIMCLQE--VQEDHYKQQIKPSLESLGYHCEFK-RRTGLKPDG 285

Query: 118 LLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGDLRQEILIV 171
                 ++ F +V+   + +   G      D V  ++ +  IDP     N      I + 
Sbjct: 286 CAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRPIDPHVSLSN------ICVA 339

Query: 172 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 231
           NTHLL+  +     ++L Q+  +L  +    +  +    P++LCGD+N      +Y+F++
Sbjct: 340 NTHLLY--NPRRGDIKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFIK 397

Danio rerio (taxid: 7955)

>sp|Q5VTE6|ANGE2_HUMAN Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)

Query: 58  YWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDG 117
           +W  R   IL  + +  + ++CLQE  V  +         L   GY      RT  + DG
Sbjct: 196 HWSFRFPNILKEIKHFDADVLCLQE--VQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDG 253

Query: 118 LLTAVHKDYFRV--VNYRDLLFNDFG----DRVAQLLHVELIDPFSQCRNGDLRQEILIV 171
                    F +  VN  +    D      D V  +L ++   P++ C        I + 
Sbjct: 254 CAICFKHSKFSLLSVNPVEFFRPDISLLDRDNVGLVLLLQPKIPYAAC------PAICVA 307

Query: 172 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 231
           NTHLL+  +     ++L Q+  +L  + S   + +    PI++CGD+N      +Y F++
Sbjct: 308 NTHLLY--NPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIK 365

Homo sapiens (taxid: 9606)

>sp|Q24239|ANGEL_DROME Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2

 Score = 49.3 bits (116), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDA---GYVNFKLARTNNRG 115
           W  R Q +L  LL     I+CLQE    +  ++ +   R+ +     YV  K  +T  R 
Sbjct: 98  WQRRQQNLLRELLKLDPDILCLQEMQFDHLPVL-VQRLRMGNGKKLAYVYKK--KTGCRT 154

Query: 116 DGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHL 175
           DG         F +++++ +   D    +    +V L   F   +  + ++E ++  THL
Sbjct: 155 DGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEFVVATTHL 214

Query: 176 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 230
           LF  ++  S VR  QV +IL+ ++S+  +      PI+L GD+N        +FL
Sbjct: 215 LF--NTKRSDVRCAQVERILEELQSFSTD-----TPIVLTGDFNSLPDSSPIEFL 262

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	445
225455177	451	PREDICTED: uncharacterized calcium-bindi	0.988	0.975	0.807	0.0
147837828	445	hypothetical protein VITISV_034892 [Viti	0.988	0.988	0.807	0.0
297792837	437	calcium ion binding protein [Arabidopsis	0.970	0.988	0.819	0.0
145334817	436	calcium-binding endonuclease/exonuclease	0.970	0.990	0.814	0.0
224118484	451	predicted protein [Populus trichocarpa]	0.964	0.951	0.831	0.0
449438851	447	PREDICTED: uncharacterized calcium-bindi	0.982	0.977	0.806	0.0
255560600	456	carbon catabolite repressor protein, put	0.988	0.964	0.813	0.0
259490803	436	calcium binding protein [Lepidium latifo	0.970	0.990	0.798	0.0
356518677	450	PREDICTED: uncharacterized calcium-bindi	0.993	0.982	0.788	0.0
356507540	450	PREDICTED: uncharacterized calcium-bindi	0.988	0.977	0.790	0.0

>gi|225455177|ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding protein At1g02270 [Vitis vinifera] gi|302144002|emb|CBI23107.3| unnamed protein product [Vitis vinifera]

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/442 (80%), Positives = 394/442 (89%), Gaps = 2/442 (0%)

Query: 6   KGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNE--NCRESDCRAYWFGRN 63
           KGR+SRIG+YAI+SS+RDH   PCI+CTTFNILAPIYKRL++E  NCRESDCR YW  RN
Sbjct: 9   KGRVSRIGNYAIASSLRDHHHHPCISCTTFNILAPIYKRLNHEDTNCRESDCRTYWLSRN 68

Query: 64  QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVH 123
           + ILDWL+ ERSSIICLQEFWVGNEELV++YEKRL DAGY+NFKLARTNNRGDGLLT+VH
Sbjct: 69  RAILDWLIDERSSIICLQEFWVGNEELVNLYEKRLGDAGYINFKLARTNNRGDGLLTSVH 128

Query: 124 KDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL 183
           KDYFRV+N+R LLFNDFGDRVAQLLHVEL+ PF  CR+ +  QEILIVNTHLLFPHDS+L
Sbjct: 129 KDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHLLFPHDSTL 188

Query: 184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH 243
            ++RL QVYKILQ+VESYQKE+ L P+PIILCGDWNGSK GHVYKFLRSQGFVSSYDTAH
Sbjct: 189 CIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGFVSSYDTAH 248

Query: 244 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLT 303
           QYTDAD HKWVSHRNHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLT
Sbjct: 249 QYTDADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLT 308

Query: 304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
           E DAFAFLKADN GD ITYSGFCEAL QLNLTGH HGL+DEE  DLWVQADIDGNGV+DY
Sbjct: 309 EDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQADIDGNGVLDY 368

Query: 364 KEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYS 423
           KEFQ+RIW  TWS QR++  +E  D  +K   EQ IGFSVKNAVLFP EVEKG WPENYS
Sbjct: 369 KEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEVEKGMWPENYS 428

Query: 424 LSDHARLTVVFSPIRMPCSRLS 445
           LSDHARLTVVFSP+RMPC++++
Sbjct: 429 LSDHARLTVVFSPVRMPCAQIT 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147837828|emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/442 (80%), Positives = 394/442 (89%), Gaps = 2/442 (0%)

Query: 6   KGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNE--NCRESDCRAYWFGRN 63
           KGR+SRIG+YAI+SS+RDH   PCI+CTTFNILAPIYKRL++E  NCRESDCR YW  RN
Sbjct: 3   KGRVSRIGNYAIASSLRDHHHHPCISCTTFNILAPIYKRLNHEDTNCRESDCRTYWLSRN 62

Query: 64  QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVH 123
           + ILDWL+ ERSSIICLQEFWVGNEELV++YEKRL DAGY+NFKLARTNNRGDGLLT+VH
Sbjct: 63  RAILDWLIDERSSIICLQEFWVGNEELVNLYEKRLGDAGYINFKLARTNNRGDGLLTSVH 122

Query: 124 KDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL 183
           KDYFRV+N+R LLFNDFGDRVAQLLHVEL+ PF  CR+ +  QEILIVNTHLLFPHDS+L
Sbjct: 123 KDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHLLFPHDSTL 182

Query: 184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH 243
            ++RL QVYKILQ+VESYQKE+ L P+PIILCGDWNGSK GHVYKFLRSQGFVSSYDTAH
Sbjct: 183 CIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGFVSSYDTAH 242

Query: 244 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLT 303
           QYTDAD HKWVSHRNHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLT
Sbjct: 243 QYTDADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLT 302

Query: 304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
           E DAFAFLKADN GD ITYSGFCEAL QLNLTGH HGL+DEE  DLWVQADIDGNGV+DY
Sbjct: 303 EDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQADIDGNGVLDY 362

Query: 364 KEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYS 423
           KEFQ+RIW  TWS QR++  +E  D  +K   EQ IGFSVKNAVLFP EVEKG WPENYS
Sbjct: 363 KEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEVEKGMWPENYS 422

Query: 424 LSDHARLTVVFSPIRMPCSRLS 445
           LSDHARLTVVFSP+RMPC++++
Sbjct: 423 LSDHARLTVVFSPVRMPCAQIT 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792837|ref|XP_002864303.1| calcium ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310138|gb|EFH40562.1| calcium ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/443 (81%), Positives = 396/443 (89%), Gaps = 11/443 (2%)

Query: 5   MKGRISRIGSYAISSSIRD-HQQQPCITCTTFNILAPIYKRLS--NENCRESDCRAYWFG 61
           MKGRIS+IGSYAISSSIRD HQQQPCI+CTTFNILAPIYKRLS  +++ RESD RAYW G
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLG 60

Query: 62  RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 121
           RN RILDWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTA
Sbjct: 61  RNHRILDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTA 120

Query: 122 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 181
           VHKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS
Sbjct: 121 VHKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDS 177

Query: 182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 241
           +LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDT
Sbjct: 178 TLSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 237

Query: 242 AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRAS 301
           AH+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRAS
Sbjct: 238 AHRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRAS 297

Query: 302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
           LT  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW+QADIDGNG++
Sbjct: 298 LTAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWIQADIDGNGLL 357

Query: 362 DYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN 421
           DYKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPEN
Sbjct: 358 DYKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPEN 412

Query: 422 YSLSDHARLTVVFSPIRMPCSRL 444
           YSLSDHARLTVVFSPIRMPCS+L
Sbjct: 413 YSLSDHARLTVVFSPIRMPCSQL 435

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334817|ref|NP_001078754.1| calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|27311783|gb|AAO00857.1| putative protein [Arabidopsis thaliana] gi|30387507|gb|AAP31919.1| At5g54130 [Arabidopsis thaliana] gi|51970738|dbj|BAD44061.1| putative protein [Arabidopsis thaliana] gi|332009070|gb|AED96453.1| calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana]

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/442 (81%), Positives = 393/442 (88%), Gaps = 10/442 (2%)

Query: 5   MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLS--NENCRESDCRAYWFGR 62
           MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS  +++ RESD RAYW GR
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query: 63  NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 122
           N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct: 61  NHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query: 123 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 182
           HKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct: 121 HKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query: 183 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 242
           LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct: 178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query: 243 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 302
           H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct: 238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query: 303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 362
           T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW QADIDGNG++D
Sbjct: 298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWTQADIDGNGLLD 357

Query: 363 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 422
           YKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPENY
Sbjct: 358 YKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPENY 412

Query: 423 SLSDHARLTVVFSPIRMPCSRL 444
           SLSDHARLTVVFSPIRMPCS+L
Sbjct: 413 SLSDHARLTVVFSPIRMPCSQL 434

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118484|ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1| predicted protein [Populus trichocarpa]

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/439 (83%), Positives = 394/439 (89%), Gaps = 10/439 (2%)

Query: 13  GSYAISSSI--RDHQQQPCITCTTFNILAPIYKRLS-----NENCRESDCRAYWFGRNQR 65
           GSYAISSS+  RDH+QQPCITCTTFNILAPIYKRL+     ++N RESD RAYW  RNQR
Sbjct: 14  GSYAISSSMSMRDHRQQPCITCTTFNILAPIYKRLNINNDKDQNSRESDYRAYWLVRNQR 73

Query: 66  ILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKD 125
           ILD LL ERSSIICLQEFW+GNEELV+MYEKRL DAGY+NFKLARTNNRGDGLL AV KD
Sbjct: 74  ILDSLLRERSSIICLQEFWLGNEELVNMYEKRLGDAGYLNFKLARTNNRGDGLLIAVRKD 133

Query: 126 YFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL 185
           YFRV+N+R+LLFND GDRVAQLLHVEL  P S CRN D RQEILIVNTHLLFPHDSSLSL
Sbjct: 134 YFRVINHRELLFNDCGDRVAQLLHVELAAPCSPCRNNDTRQEILIVNTHLLFPHDSSLSL 193

Query: 186 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY 245
           VRL+QVYKILQ+VESYQKE+ L P PI+LCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY
Sbjct: 194 VRLNQVYKILQYVESYQKENKLSPTPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY 253

Query: 246 TDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTET 305
           TDADAHKWVSH NHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLTE 
Sbjct: 254 TDADAHKWVSHLNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLTEE 313

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           DAFAFLKAD+D D ITYSGFCEAL+QLNLTGH +GL+DEETKDLWVQADIDGNGV+DYKE
Sbjct: 314 DAFAFLKADSDSDCITYSGFCEALQQLNLTGHCYGLSDEETKDLWVQADIDGNGVLDYKE 373

Query: 366 FQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLS 425
           FQQRIW  TWS+++   +DE +D  +K   EQTIGFSV+NAVLFPPEVEKG WPENYSLS
Sbjct: 374 FQQRIWNPTWSEEK---DDEIQDDNLKGREEQTIGFSVENAVLFPPEVEKGMWPENYSLS 430

Query: 426 DHARLTVVFSPIRMPCSRL 444
           DHARLTVVFSPIRMPCS+L
Sbjct: 431 DHARLTVVFSPIRMPCSQL 449

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438851|ref|XP_004137201.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cucumis sativus] gi|449483236|ref|XP_004156530.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cucumis sativus]

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/444 (80%), Positives = 397/444 (89%), Gaps = 7/444 (1%)

Query: 4   KMKGRISRIGSYAISSSIRDHQ-QQPCITCTTFNILAPIYKRLSNEN--CRESDCRAYWF 60
           KMKGRIS IGSYAI+SSI+DH  Q+P ITCTTFNILAPIY RL+ ++  CRESD R YW 
Sbjct: 6   KMKGRISMIGSYAIASSIKDHHHQRPSITCTTFNILAPIYNRLNQQDPSCRESDYRTYWL 65

Query: 61  GRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLT 120
            RNQRILDWLLYE+SSIICLQEFWVGN+ELV++YE RL +AGY++FKLARTNNRGDGLLT
Sbjct: 66  ARNQRILDWLLYEKSSIICLQEFWVGNQELVNIYENRLGNAGYISFKLARTNNRGDGLLT 125

Query: 121 AVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD 180
           AVHKDYFRVVNYR+LLFND GDRVAQLLHVEL  PFS CRN D+RQEILIVNTHLLFPHD
Sbjct: 126 AVHKDYFRVVNYRELLFNDCGDRVAQLLHVELAVPFSHCRNNDIRQEILIVNTHLLFPHD 185

Query: 181 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 240
           SSL LVRL+QVYKILQ+VESYQKE+ L P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYD
Sbjct: 186 SSLCLVRLNQVYKILQYVESYQKENKLNPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 245

Query: 241 TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRA 300
           TAHQYTDAD+ KWVSHRNHRGNICGVDFIWLLNPN YR+LLKASWSEA+FGMFK LLRRA
Sbjct: 246 TAHQYTDADSRKWVSHRNHRGNICGVDFIWLLNPNGYRRLLKASWSEAIFGMFKYLLRRA 305

Query: 301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV 360
           SLT  DAFAFLKADNDGDYITYSGFCE L QLNLTGH HGL+ EE  DLWVQAD DGNG+
Sbjct: 306 SLTADDAFAFLKADNDGDYITYSGFCEGLRQLNLTGHLHGLSVEEINDLWVQADSDGNGI 365

Query: 361 VDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPE 420
           +D+ EF QRIW +T +++R++ ++E E    K + EQTIGFSV+NAVLFP EVEKGRWPE
Sbjct: 366 LDHNEF-QRIWNSTGTEKRDEKSNEIES---KENQEQTIGFSVENAVLFPAEVEKGRWPE 421

Query: 421 NYSLSDHARLTVVFSPIRMPCSRL 444
           +YSLSDHARLTVVF+PIRMPCS+L
Sbjct: 422 DYSLSDHARLTVVFAPIRMPCSQL 445

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560600|ref|XP_002521314.1| carbon catabolite repressor protein, putative [Ricinus communis] gi|223539499|gb|EEF41088.1| carbon catabolite repressor protein, putative [Ricinus communis]

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/445 (81%), Positives = 390/445 (87%), Gaps = 5/445 (1%)

Query: 4   KMKGRISRIGSYAISSSI--RDHQQQPCITCTTFNILAPIYKRLSNENCR---ESDCRAY 58
           K KGRISRIGSYAISSS+  RDH+QQPCITCTTFNILAPIYKRL+  N +   ESDCRAY
Sbjct: 9   KNKGRISRIGSYAISSSMSMRDHRQQPCITCTTFNILAPIYKRLNLNNNKNSRESDCRAY 68

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
           W  RN RILD LL ERSSIICLQEFW GNEELV+MYEKRL DAGY+NF+L RTNNRGDGL
Sbjct: 69  WLARNHRILDSLLRERSSIICLQEFWSGNEELVNMYEKRLGDAGYINFQLPRTNNRGDGL 128

Query: 119 LTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFP 178
           LTA+ KDYFRV+NYR++ FNDFGDRVAQLLHVEL  PFS CRN D  QEILIVNTHLLFP
Sbjct: 129 LTAIRKDYFRVINYREVHFNDFGDRVAQLLHVELDAPFSPCRNNDTCQEILIVNTHLLFP 188

Query: 179 HDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSS 238
           HDSSL +VRLHQVYKILQHVESYQKE  L P PIILCGDWNGSKRGHVYKFLRSQGFVSS
Sbjct: 189 HDSSLCIVRLHQVYKILQHVESYQKECKLSPRPIILCGDWNGSKRGHVYKFLRSQGFVSS 248

Query: 239 YDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLR 298
           YD AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPN Y KLLK SWSEAVF MFK LLR
Sbjct: 249 YDAAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNGYCKLLKTSWSEAVFDMFKYLLR 308

Query: 299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN 358
           RASLTE DAFAFLKAD DGD ITY GFC+AL QL LTGH+HGL  EETKDLW+QADIDG+
Sbjct: 309 RASLTEEDAFAFLKADKDGDCITYVGFCDALRQLKLTGHRHGLCAEETKDLWLQADIDGS 368

Query: 359 GVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRW 418
           G++DYKEFQQRIW    ++Q++++ +EDEDG  +   EQTIGFSV+NAVLFPPE EKGRW
Sbjct: 369 GLLDYKEFQQRIWNPASAEQKDEITNEDEDGIPRDRQEQTIGFSVENAVLFPPEAEKGRW 428

Query: 419 PENYSLSDHARLTVVFSPIRMPCSR 443
           PENYSLSDHARLTVVFSPIRMPCS+
Sbjct: 429 PENYSLSDHARLTVVFSPIRMPCSQ 453

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259490803|gb|ACW82436.1| calcium binding protein [Lepidium latifolium]

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/442 (79%), Positives = 389/442 (88%), Gaps = 10/442 (2%)

Query: 5   MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLS--NENCRESDCRAYWFGR 62
           MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS  +++ RESD RAYW GR
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query: 63  NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 122
           N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct: 61  NHRIVDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query: 123 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 182
           HKDYFRVVN RDLLFND GDRVAQLLH EL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct: 121 HKDYFRVVNSRDLLFNDCGDRVAQLLHAELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query: 183 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 242
           LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct: 178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query: 243 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 302
           H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct: 238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query: 303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 362
           T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW+QADIDGNG++D
Sbjct: 298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWIQADIDGNGLLD 357

Query: 363 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 422
           YKEF+QRIW   WS+QR     + ED   K + EQT+GFSVKNAVLFPPEV KG WP+NY
Sbjct: 358 YKEFRQRIWNQPWSEQR-----DAEDREAKGNQEQTVGFSVKNAVLFPPEVGKGIWPKNY 412

Query: 423 SLSDHARLTVVFSPIRMPCSRL 444
           SLSDHARLTVVFSPI MPCS+L
Sbjct: 413 SLSDHARLTVVFSPITMPCSQL 434

Source: Lepidium latifolium

Species: Lepidium latifolium

Genus: Lepidium

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518677|ref|XP_003528005.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Glycine max]

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/450 (78%), Positives = 400/450 (88%), Gaps = 8/450 (1%)

Query: 1   MRT----KMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEN--CRESD 54
           MRT    K  GRISRIGS+AISSSI+++QQQPCITCTTFNILAPIYKR+++E+  CRESD
Sbjct: 1   MRTDRWAKSMGRISRIGSFAISSSIKENQQQPCITCTTFNILAPIYKRINHEDPSCRESD 60

Query: 55  CRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNR 114
            RAYW  RN RILDWLL ERSSIICLQEFWVGNEELV++YEKRL DAGYV+FKL RTNNR
Sbjct: 61  YRAYWLARNHRILDWLLNERSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNR 120

Query: 115 GDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTH 174
           GDGLL AV K+YF ++NY++L FNDFGDRVAQLLHVEL  PFSQ RN ++RQEILIVNTH
Sbjct: 121 GDGLLIAVQKEYFNILNYKELHFNDFGDRVAQLLHVELASPFSQWRNSNIRQEILIVNTH 180

Query: 175 LLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG 234
           LLFPHDS+LSLVRL QVYKILQ+VESYQ +  LKP+PI+LCGDWNGSKRGHVYKFLRSQG
Sbjct: 181 LLFPHDSTLSLVRLQQVYKILQYVESYQNDFQLKPMPIMLCGDWNGSKRGHVYKFLRSQG 240

Query: 235 FVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 294
           FVSSYDTAHQYTDADAHKWVSHRNHRGNIC VDFIWLLNP+KYRKLLKASWSEAVFGMFK
Sbjct: 241 FVSSYDTAHQYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFK 300

Query: 295 CLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD 354
            LLRRASLTE+DAF+FLK DN+ D ITY GFCEAL+QL+LTGH HGL++EE KDLW+QAD
Sbjct: 301 YLLRRASLTESDAFSFLKVDNE-DCITYFGFCEALKQLSLTGHCHGLSEEEIKDLWLQAD 359

Query: 355 IDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVE 414
           +DG GV+D+KEF Q+IW +T  D+ ++ N + +DG    + EQTIGFSVKNAVLFPPEVE
Sbjct: 360 VDGKGVLDFKEFLQQIWSSTAPDRDDNKNGDQDDG-SNDAQEQTIGFSVKNAVLFPPEVE 418

Query: 415 KGRWPENYSLSDHARLTVVFSPIRMPCSRL 444
           KGRWPE+YSLSDHARLTVVF PIRMPCS+L
Sbjct: 419 KGRWPEDYSLSDHARLTVVFLPIRMPCSQL 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507540|ref|XP_003522522.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Glycine max]

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/444 (79%), Positives = 395/444 (88%), Gaps = 4/444 (0%)

Query: 3   TKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEN--CRESDCRAYWF 60
            K  GRISRIGS+AISSSI+++QQQPCITCTTFNILAPIYKR+++E+  CRESD RAYW 
Sbjct: 7   AKSMGRISRIGSFAISSSIKENQQQPCITCTTFNILAPIYKRINHEDPSCRESDYRAYWL 66

Query: 61  GRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLT 120
            RN RILDWLL +RSSIICLQEFWVGNEELV++YEK L DAGYV+FKL RTNNRGDGLL 
Sbjct: 67  ARNHRILDWLLNDRSSIICLQEFWVGNEELVNLYEKSLGDAGYVSFKLGRTNNRGDGLLI 126

Query: 121 AVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD 180
           AV ++YF ++NY++L FNDFGDRVAQLLHVEL  P SQ RN ++RQEILIVNTHL+FPHD
Sbjct: 127 AVQREYFNILNYKELHFNDFGDRVAQLLHVELASPISQWRNSNIRQEILIVNTHLIFPHD 186

Query: 181 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 240
           S+LSLVRL QVYKILQ+VESYQ +  LKP+PI+LCGDWNGSKRGHVYKFLRSQGFVSSYD
Sbjct: 187 STLSLVRLQQVYKILQYVESYQNDFQLKPMPIVLCGDWNGSKRGHVYKFLRSQGFVSSYD 246

Query: 241 TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRA 300
           TAH YTDADAHKWVSHRNHRGNIC VDFIWLLNP+KYRKLLKASWSEAVFGMFK LLRRA
Sbjct: 247 TAHHYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLLRRA 306

Query: 301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV 360
            LTE+DAFAFLK DN+ D ITYSGFCEAL+QL+LTGH HGL+DEE KDLWVQAD+DGNGV
Sbjct: 307 ILTESDAFAFLKVDNE-DCITYSGFCEALKQLSLTGHCHGLSDEEIKDLWVQADVDGNGV 365

Query: 361 VDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPE 420
           +DYK+F Q+IW +T  D  ++ N + +DG    + EQTIGFSVKNAVLFPPEVEKGRWPE
Sbjct: 366 LDYKKFLQQIWSSTAPDIDDNKNGDQDDG-SNDAQEQTIGFSVKNAVLFPPEVEKGRWPE 424

Query: 421 NYSLSDHARLTVVFSPIRMPCSRL 444
           +YSLSDHARLTVVFSPIRMPCS+L
Sbjct: 425 DYSLSDHARLTVVFSPIRMPCSQL 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	445
TAIR|locus:2166547	436	AT5G54130 [Arabidopsis thalian	0.970	0.990	0.814	1.2e-198
TAIR|locus:2204863	484	AT1G02270 "AT1G02270" [Arabido	0.982	0.902	0.621	2.3e-151
TAIR|locus:504956231	454	AT1G73875 "AT1G73875" [Arabido	0.426	0.418	0.265	6.1e-07
UNIPROTKB|F1NGS9	569	PDE12 "Uncharacterized protein	0.224	0.175	0.283	5.5e-05
TAIR|locus:2832132	754	AT5G11350 "AT5G11350" [Arabido	0.361	0.213	0.267	0.00012
FB|FBgn0016762	354	angel "angel" [Drosophila mela	0.364	0.457	0.262	0.00014
ZFIN|ZDB-GENE-030131-6498	569	angel2 "angel homolog 2 (Droso	0.366	0.286	0.251	0.00014

TAIR|locus:2166547 AT5G54130 [Arabidopsis thaliana (taxid:3702)]

 Score = 1923 (682.0 bits), Expect = 1.2e-198, P = 1.2e-198
 Identities = 360/442 (81%), Positives = 393/442 (88%)

Query:     5 MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSN--ENCRESDCRAYWFGR 62
             MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS+  ++ RESD RAYW GR
Sbjct:     1 MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query:    63 NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 122
             N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct:    61 NHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query:   123 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 182
             HKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct:   121 HKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query:   183 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 242
             LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct:   178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query:   243 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 302
             H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct:   238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query:   303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 362
             T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW QADIDGNG++D
Sbjct:   298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWTQADIDGNGLLD 357

Query:   363 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 422
             YKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPENY
Sbjct:   358 YKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPENY 412

Query:   423 SLSDHARLTVVFSPIRMPCSRL 444
             SLSDHARLTVVFSPIRMPCS+L
Sbjct:   413 SLSDHARLTVVFSPIRMPCSQL 434

GO:0005509 "calcium ion binding" evidence=IEA

TAIR|locus:2204863 AT1G02270 "AT1G02270" [Arabidopsis thaliana (taxid:3702)]

 Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
 Identities = 274/441 (62%), Positives = 343/441 (77%)

Query:     5 MKGRISR-IGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEN--CRESDCRAYWFG 61
             + GR ++ +    ++S++     +  I+CTTFNILAPIYKR+  +N   RESD R  W  
Sbjct:    45 LSGRNNKPLSVMRLNSNLASSMVESNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLA 104

Query:    62 RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 121
             RNQRILD LL++RSS+ICLQE WVGNEELV+MY  +LS +GY  ++LARTN+RGDGLLTA
Sbjct:   105 RNQRILDLLLHQRSSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTA 164

Query:   122 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 181
             +HKD+F+VVNYR+LLFNDFGDRVAQLLHV+ + PF      D++QE++IVNTHLLFPHDS
Sbjct:   165 IHKDHFKVVNYRELLFNDFGDRVAQLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDS 224

Query:   182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 241
             SLS+VRLHQVYKIL+++E+YQKE+ L  +PIILCGDWNGSKRGHVYKFLRSQGF+SSYD 
Sbjct:   225 SLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDD 284

Query:   242 AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRAS 301
             AHQYTD+DAH+WVSHRNHRGNICGVDFIWL NP+  RK L+ SW EAVF + K  L +AS
Sbjct:   285 AHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQLHKAS 344

Query:   302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
             + E DAF FL A N  D +TYS FC AL+++NLTG  HGL+ EETK+LWV+AD+DGNGV 
Sbjct:   345 IAEDDAFTFLGAKNHSDSLTYSDFCLALQKVNLTGIPHGLSFEETKELWVRADLDGNGVF 404

Query:   362 DYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN 421
             DY+E + +IW  T  +Q  +  +   +   +   ++ IG  V  A+LFP E EKG WPEN
Sbjct:   405 DYEELK-KIWNMTMVNQPGNCKESVMESKKEEGEDEAIGLKVNKAILFPQEAEKGLWPEN 463

Query:   422 YSLSDHARLTVVFSPIRMPCS 442
             Y++SDHA LTV FSP++M CS
Sbjct:   464 YNISDHACLTVQFSPVKMLCS 484

GO:0003824 "catalytic activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:504956231 AT1G73875 "AT1G73875" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 56/211 (26%), Positives = 98/211 (46%)

Query:    59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
             W  R   I   +    +SI+CLQE      +  D  +  L + G+     +RT    DG 
Sbjct:   130 WSRRKHLICKEISRYNASILCLQEV-----DRFDDLDVLLKNRGFRGVHKSRTGEASDGC 184

Query:   119 LTAVHKDYFRVVNYRDLLFNDFGDR--VAQLLHVELI---DPFSQCR--NGDLRQEILIV 171
                  ++ F +++++ + F+ FG R  VAQL  +E+    DP S+ R  + D R+ +++ 
Sbjct:   185 AIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRR-LVVG 243

Query:   172 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 231
             N H+LF  +     ++L QV   L+  ++Y+       IP+ + GD N + +  +Y F+ 
Sbjct:   244 NIHVLF--NPKRGDIKLGQVRLFLE--KAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIA 299

Query:   232 SQGFVSSYDTAHQY---TDADAHKWVSHRNH 259
             S    +      Q    T+ +  K  S RNH
Sbjct:   300 SADLDTQLHDRRQISGQTEVEP-KERSFRNH 329

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NGS9 PDE12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 103 (41.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
 Identities = 30/106 (28%), Positives = 51/106 (48%)

Query:   163 DLRQEILIVNTHLLFPHDSSLS-LVRLHQVYKILQHVESYQKEHNLKP-IPIILCGDWNG 220
             D  +++ + NTHL + H  +L   +RL Q+   L H++    +  L P IP+I CGD+N 
Sbjct:   403 DPSKKLCVANTHLYW-HPKALGGNIRLIQIAVALSHIKYVACD--LYPNIPLIFCGDFNS 459

Query:   221 SKRGHVYKFLRSQGFVSSY-DTAHQYTDADAHKWVSHRNHRGNICG 265
             +     Y F+ + G    + D A    +   +  +SH     + CG
Sbjct:   460 TPSSGTYGFINTGGIAEDHEDWASNGEEERCNMPLSHPFKLQSACG 505

GO:0005739 "mitochondrion" evidence=IEA

TAIR|locus:2832132 AT5G11350 "AT5G11350" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 49/183 (26%), Positives = 82/183 (44%)

Query:    59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
             W  R  +++  L    + I+CLQE     ++  D+ E+ +   GY      RT N  DG 
Sbjct:   214 WGWRKSKLVFELSLWSADIMCLQEV----DKFQDL-EEEMKHRGYSAIWKMRTGNAVDGC 268

Query:   119 LTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELI---------DPFSQCRNGDLRQE 167
                   + F++V+   + FN  G  D VAQ+  +E +          P  +   G  R  
Sbjct:   269 AIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLETLLTSHTKENETPPPESSAGSHR-- 326

Query:   168 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVY 227
             ++I N H+LF  +      +L QV  +L    +  K  +    PI+LCGD+N + +  +Y
Sbjct:   327 VVICNIHVLF--NPKRGDFKLGQVRTLLDKAHAVSKLWD--DAPIVLCGDFNCTPKSPLY 382

Query:   228 KFL 230
              F+
Sbjct:   383 NFI 385

GO:0003824 "catalytic activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

FB|FBgn0016762 angel "angel" [Drosophila melanogaster (taxid:7227)]

 Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
 Identities = 46/175 (26%), Positives = 80/175 (45%)

Query:    59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDA---GYVNFKLARTNNRG 115
             W  R Q +L  LL     I+CLQE    +  ++ +   R+ +     YV  K  +T  R 
Sbjct:    98 WQRRQQNLLRELLKLDPDILCLQEMQFDHLPVL-VQRLRMGNGKKLAYVYKK--KTGCRT 154

Query:   116 DGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHL 175
             DG         F +++++ +   D    +    +V L   F   +  + ++E ++  THL
Sbjct:   155 DGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEFVVATTHL 214

Query:   176 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 230
             LF  ++  S VR  QV +IL+ ++S+  +      PI+L GD+N        +FL
Sbjct:   215 LF--NTKRSDVRCAQVERILEELQSFSTD-----TPIVLTGDFNSLPDSSPIEFL 262

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-6498 angel2 "angel homolog 2 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
 Identities = 46/183 (25%), Positives = 78/183 (42%)

Query:    59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNNRGDG 117
             W  R   I+  L    + I+CLQE  V  +      +  L   GY   FK  RT  + DG
Sbjct:   229 WRNRFPNIIKELEQYSADIMCLQE--VQEDHYKQQIKPSLESLGYHCEFK-RRTGLKPDG 285

Query:   118 LLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGDLRQEILIV 171
                   ++ F +V+   + +   G      D V  ++ +  IDP     N      I + 
Sbjct:   286 CAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRPIDPHVSLSN------ICVA 339

Query:   172 NTHLLF-PHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 230
             NTHLL+ P       ++L Q+  +L  +    +  +    P++LCGD+N      +Y+F+
Sbjct:   340 NTHLLYNPRRGD---IKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFI 396

Query:   231 RSQ 233
             + +
Sbjct:   397 KDR 399


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      445       445   0.00091  118 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  333 KB (2167 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.19u 0.13s 35.32t   Elapsed:  00:00:01
  Total cpu time:  35.19u 0.13s 35.32t   Elapsed:  00:00:01
  Start:  Fri May 10 11:16:56 2013   End:  Fri May 10 11:16:57 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037150001 SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (451 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	445
cd09097	329	cd09097, Deadenylase_CCR4, C-terminal deadenylase	2e-11
cd09096	280	cd09096, Deadenylase_nocturnin, C-terminal deadeny	3e-09
PLN03144	606	PLN03144, PLN03144, Carbon catabolite repressor pr	3e-07
cd09083	252	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphata	3e-05
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	7e-05
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	6e-04
COG5239	378	COG5239, CCR4, mRNA deadenylase, exonuclease subun	0.001
cd08372	241	cd08372, EEP, Exonuclease-Endonuclease-Phosphatase	0.001
cd10313	350	cd10313, Deadenylase_CCR4a, C-terminal deadenylase	0.002
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	0.002

>gnl|CDD|197331 cd09097, Deadenylase_CCR4, C-terminal deadenylase domain of CCR4 and related domains

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 42/213 (19%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRG--- 115
           W  R Q IL  +L   + I+CLQE  V  ++  D +   L   GY      ++  +    
Sbjct: 27  WDYRKQNILKEILSYNADILCLQE--VETDQYEDFFLPELKQHGYDGVFKPKSRAKTMSE 84

Query: 116 ------DGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRV------AQLLHV 150
                 DG         F++V    + FN             D  +RV      A ++ +
Sbjct: 85  AERKHVDGCAIFFKTSKFKLVEKHLIEFNQLAMANADAEGSEDMLNRVMTKDNIALIVVL 144

Query: 151 ELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP- 209
           E  +       G+  Q +++ NTH+ +  +   S V+L Q   +L+ +E   ++ +  P 
Sbjct: 145 EARET---SYEGNKGQLLIVANTHIHWDPE--FSDVKLVQTMMLLEELEKIAEKFSRYPY 199

Query: 210 -----IPIILCGDWNGSKRGHVYKFLRSQGFVS 237
                IP+++CGD+N      VY+ L S G VS
Sbjct: 200 EDSADIPLVVCGDFNSLPDSGVYELL-SNGSVS 231

This subfamily contains the C-terminal catalytic domain of the deadenylases, Saccharomyces cerevisiae Ccr4p and two vertebrate homologs (CCR4a and CCR4b), and related domains. CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1 (called Pop2 in yeast), is a DEDD-type protein and does not belong in this superfamily. Saccharomyces cerevisiae CCR4 (or Ccr4p) is a 3'-5' poly(A) RNA and ssDNA exonuclease. It is the catalytic subunit of the yeast mRNA deadenylase (Ccr4p/Pop2p/Not complex). This complex participates in various ways in mRNA metabolism, including transcription initiation and elongation, and mRNA degradation. Ccr4p degrades both poly(A) and single-stranded DNA. There are two vertebrate homologs of Ccr4p, CCR4a (also called CCR4-NOT transcription complex subunit 6 or CNOT6) and CCR4b (also called CNOT6-like or CNOT6L), which independently associate with other components to form distinct CCR4-NOT multisubunit complexes. The nuclease domain of CNOT6 and CNOT6L exhibits Mg2+-dependent deadenylase activity, with specificity for poly (A) RNA as substrate. CCR4a is a component of P-bodies and is necessary for foci formation. CCR4b regulates p27/Kip1 mRNA levels, thereby influencing cell cycle progression. They both contribute to the prevention of cell death by regulating insulin-like growth factor-binding protein 5. Length = 329

>gnl|CDD|197330 cd09096, Deadenylase_nocturnin, C-terminal deadenylase domain of nocturnin and related domains

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 34/207 (16%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMY----EKRLSDAGYVNFKLA----- 109
           W  R   IL+ +L     I+CLQE        VD Y    +  LS  GY           
Sbjct: 29  WEERKYLILEEILTYDPDILCLQE--------VDHYKDTLQPLLSRLGYQGTFFPKPDSP 80

Query: 110 ----RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR 165
                 NN  DG      KD F +VN   +  +    +  Q   V +     +C+     
Sbjct: 81  CLYIENNNGPDGCALFFRKDRFELVNTEKIRLSAMTLKTNQ---VAIACTL-RCKETG-- 134

Query: 166 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH 225
           +EI +  THL     +    +R  Q   +LQ+++S+ +      IP+I+CGD+N      
Sbjct: 135 REICLAVTHL--KARTGWERLRSEQGKDLLQNLQSFIEG---AKIPLIICGDFNAEPTEP 189

Query: 226 VYKFLRSQGFVSSYDTAHQYTDADAHK 252
           VYK   +     + ++A++   AD   
Sbjct: 190 VYKTFSNSSL--NLNSAYKLLSADGQS 214

This subfamily contains the C-terminal catalytic domain of the deadenylase, nocturnin, and related domains. Nocturnin is a poly(A)-specific 3' exonuclease that specifically degrades the 3' poly(A) tail of RNA in a process known as deadenylation. This nuclease activity is manganese dependent. Nocturnin is expressed in the cytoplasm of Xenopus laevis retinal photoreceptor cells in a rhythmic fashion, and it has been proposed that it participates in posttranscriptional regulation of the circadian clock or its outputs, and that the mRNA target(s) of this deadenylase are circadian clock-related. In mouse, the nocturnin gene, mNoc, is expressed in a circadian pattern in a range of tissues including retina, spleen, heart, kidney, and liver. It is highly expressed in bone-marrow stromal cells, adipocytes and hepatocytes. In mammals, nocturnin plays a role in regulating mesenchymal stem-cell lineage allocation, perhaps through regulating PPAR-gamma (peroxisome proliferator-activated receptor-gamma) nuclear translocation. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. Length = 280

>gnl|CDD|178689 PLN03144, PLN03144, Carbon catabolite repressor protein 4 homolog; Provisional

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 61/230 (26%)

Query: 31  TCTTFNILAPIYKRLSNENCRESDCRAY-------WFGRNQRILDWLLYERSSIICLQEF 83
           T  ++NIL+ +Y          SD  +Y       W  R Q +L  ++  R+ I+CLQE 
Sbjct: 256 TVLSYNILSDLYA--------TSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQE- 306

Query: 84  WVGNEELVDMYEKRLSDAGYVNFKLARTN-------NRGDGLLTAVHKDYFRVVNYRDLL 136
            V ++   + +   L   GY      +T           DG  T   +D F +V   ++ 
Sbjct: 307 -VQSDHFEEFFAPELDKHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVE 365

Query: 137 FNDFGDRVAQLLHVELIDPFSQCR---------------------------NGDLRQEIL 169
           FN    + AQ L  E + P +Q +                           NG  RQ + 
Sbjct: 366 FN----KAAQSL-TEALIPSAQKKAALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLC 420

Query: 170 IVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWN 219
           + NTH+    +  L  V+L QV+ +L+ +E   K      IP+++CGD+N
Sbjct: 421 VANTHIHANQE--LKDVKLWQVHTLLKGLE---KIAASADIPMLVCGDFN 465

Length = 606

>gnl|CDD|197317 cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 166 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH 225
           +E  + NTH    H    +  R      IL+ ++          +P+IL GD+N      
Sbjct: 126 KEFYVFNTH--LDHVGEEA--REESAKLILERIKEIAG-----DLPVILTGDFNAEPDSE 176

Query: 226 VYKFLRSQGFVSSYDTA 242
            YK L S G   + DTA
Sbjct: 177 PYKTLTSGGLKDARDTA 193

This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins. Length = 252

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D DG  I+      AL+ L       GL++EE  ++  + D DG+G +D++E
Sbjct: 4   EAFRLFDKDGDG-TISADELKAALKSLGE-----GLSEEEIDEMIREVDKDGDGKIDFEE 57

Query: 366 FQQRI 370
           F + +
Sbjct: 58  FLELM 62

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 312 KADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
             D DGD YI      + L+ L L      + +E  +  + + D DG+G + ++EF +
Sbjct: 2   LLDKDGDGYIDVEELRKLLKALGLKLTDEEV-EELIEADFNEIDKDGDGRISFEEFLE 58

Length = 60

>gnl|CDD|227564 COG5239, CCR4, mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 62/301 (20%), Positives = 105/301 (34%), Gaps = 71/301 (23%)

Query: 30  ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEE 89
            T  T+N+LA  Y          S     W  R++ +L  LLY  + I+CLQE  V  E+
Sbjct: 31  FTIMTYNVLAQTYATRKM--YPYSGWALKWSYRSRLLLQELLYYNADILCLQE--VDAED 86

Query: 90  LVDMYEKRLSDAGY--VNFKLAR----------TNNRG-------------DGLLTAVHK 124
             D ++ +L   GY  +     R          T   G              GL+ AV  
Sbjct: 87  FEDFWKDQLGKLGYDGIFIPKERKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTH 146

Query: 125 D------YFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFP 178
                  Y+       +L N    R+ +  ++  +  F    N +      + NTHL  P
Sbjct: 147 LFWHPYGYYERFRQTYILLN----RIGEKDNIAWVCLFVGLFNKEPGDTPYVANTHL--P 200

Query: 179 HDSSLSLVRLHQVYKILQHVESYQKEHN-----------LKPIPIILCGDWNGSKRGHVY 227
            D     V+L Q   + + ++   KE                + I++ GD+N  +   VY
Sbjct: 201 WDPKYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASLVY 260

Query: 228 KFLRSQGFVSSYDTAHQ-----------------YTDADAHKWVSHRNHRGNICGV-DFI 269
           KFL +   +  +++ +                      ++   +   N      GV D+I
Sbjct: 261 KFLVTS-QIQLHESLNGRDFSLYSVGYKFVHPENLKSDNSKGELGFTNWTPGFKGVIDYI 319

Query: 270 W 270
           +
Sbjct: 320 F 320

Length = 378

>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 29/193 (15%)

Query: 65  RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRG-DGLLTAVH 123
            I  W+      I+CLQE  V + +   +   +L   GY  ++   +   G +G+     
Sbjct: 17  GIARWVRELDPDIVCLQE--VKDSQYSAVALNQLLPEGYHQYQSGPSRKEGYEGVAILSK 74

Query: 124 KDYFRVVNYRDLLFN--DFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 181
              F++V      F   D G+R A ++  ++ D           +E+ +VN HL      
Sbjct: 75  TPKFKIVEKHQYKFGEGDSGERRAVVVKFDVHD-----------KELCVVNAHL--QAGG 121

Query: 182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGF------ 235
           + + VR  Q+ ++L   E  ++       P+++CGD+N        +   S         
Sbjct: 122 TRADVRDAQLKEVL---EFLKRLRQPNSAPVVICGDFNVRPSEVDSENPSSMLRLFVALN 178

Query: 236 --VSSYDTAHQYT 246
              S     H YT
Sbjct: 179 LVDSFETLPHAYT 191

This large superfamily includes the catalytic domain (exonuclease/endonuclease/phosphatase or EEP domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps proteins. Length = 241

>gnl|CDD|197340 cd10313, Deadenylase_CCR4a, C-terminal deadenylase domain of CCR4a, also known as CCR4-NOT transcription complex subunit 6

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 49/227 (21%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF----KLARTNNR 114
           W  R + I+  +L   + II LQE  V  E+    +   L + GY  F      ART + 
Sbjct: 27  WDYRKKAIMQEILSCNADIISLQE--VETEQYYSFFLVELKERGYNGFFSPKSRARTMSE 84

Query: 115 G-----DGLLTAVHKDYFRVVNYRDLLFNDFG-----------DRV--------AQLLHV 150
                 DG       + F +V    + FN              +RV        A LL +
Sbjct: 85  QERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEL 144

Query: 151 --ELID-PFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESY--QKEH 205
             ELI+    +   G  +Q IL+ N H+ +  D   S V+L Q    L  V++   +   
Sbjct: 145 RKELIEMSSGKPHLGMEKQLILVANAHMHW--DPEYSDVKLVQTMMFLSEVKNIIDKASR 202

Query: 206 NLKP--------IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQ 244
           +LK         IP++LC D N      V ++L + G     +T H+
Sbjct: 203 SLKSSVLGETGTIPLVLCADLNSLPDSGVVEYLSTGGV----ETNHK 245

This subfamily contains the C-terminal catalytic domain of the deadenylase, CCR4a, also known as CCR4-NOT transcription complex subunit 6 (CNOT6). CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1, is a DEDD-type protein and does not belong in this superfamily. There are two vertebrate CCR4 proteins, CCR4a and CCR4b (also called CNOT6-like or CNOT6L). CCR4a associates with other components, such as CNOT1-3 and Caf1, to form a CCR4-NOT multisubunit complex, which regulates transcription and mRNA degradation. The nuclease domain of CCR4a exhibits Mg2+-dependent deadenylase activity with specificity for poly (A) RNA as substrate. CCR4a is a component of P-bodies and is necessary for foci formation of various P-body components. It also plays a role in cellular responses to DNA damage, by regulating Chk2 activity. Length = 350

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           AF   D DG+     GF  A E  + +T     L DEE  ++  +AD+DG+G ++Y+EF
Sbjct: 89  AFKVFDRDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142

Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	445
PLN03144	606	Carbon catabolite repressor protein 4 homolog; Pro	100.0
KOG2338	495	consensus Transcriptional effector CCR4-related pr	99.97
PRK11756	268	exonuclease III; Provisional	99.93
TIGR03395	283	sphingomy sphingomyelin phosphodiesterase. Members	99.92
COG0708	261	XthA Exonuclease III [DNA replication, recombinati	99.91
KOG3873	422	consensus Sphingomyelinase family protein [Signal	99.88
COG5239	378	CCR4 mRNA deadenylase, exonuclease subunit and rel	99.88
COG3568	259	ElsH Metal-dependent hydrolase [General function p	99.87
TIGR00195	254	exoDNase_III exodeoxyribonuclease III. The model b	99.87
PRK13911	250	exodeoxyribonuclease III; Provisional	99.86
TIGR00633	255	xth exodeoxyribonuclease III (xth). This family is	99.86
PRK05421	263	hypothetical protein; Provisional	99.82
PTZ00297	1452	pantothenate kinase; Provisional	99.76
KOG2756	349	consensus Predicted Mg2+-dependent phosphodiestera	99.73
smart00476	276	DNaseIc deoxyribonuclease I. Deoxyribonuclease I c	99.73
PF03372	249	Exo_endo_phos: Endonuclease/Exonuclease/phosphatas	99.72
KOG0620	361	consensus Glucose-repressible alcohol dehydrogenas	99.7
PRK15251	271	cytolethal distending toxin subunit CdtB; Provisio	99.55
COG2374	798	Predicted extracellular nuclease [General function	99.48
COG3021	309	Uncharacterized protein conserved in bacteria [Fun	99.41
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.32
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.3
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.23
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.22
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.17
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.15
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.14
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	99.11
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	99.09
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	99.03
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.01
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	99.0
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.98
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.97
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.97
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.93
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.9
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.89
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.88
PTZ00183	158	centrin; Provisional	98.82
PTZ00184	149	calmodulin; Provisional	98.79
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.75
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	98.74
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.72
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.68
PF14658	66	EF-hand_9: EF-hand domain	98.68
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.67
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.67
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.67
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.64
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.63
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.62
smart00128	310	IPPc Inositol polyphosphate phosphatase, catalytic	98.62
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.59
PTZ00183	158	centrin; Provisional	98.58
PTZ00184	149	calmodulin; Provisional	98.57
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	98.53
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.23
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.21
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.19
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.14
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	98.1
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	98.06
PLN02964	644	phosphatidylserine decarboxylase	98.04
PLN02964	644	phosphatidylserine decarboxylase	97.97
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	97.97
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.96
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	97.88
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	97.84
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	97.83
KOG0566	1080	consensus Inositol-1,4,5-triphosphate 5-phosphatas	97.83
PF14529	119	Exo_endo_phos_2: Endonuclease-reverse transcriptas	97.82
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.6
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.57
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	97.45
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	97.37
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	97.34
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	97.29
KOG4065	144	consensus Uncharacterized conserved protein [Funct	97.21
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.04
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	96.94
KOG1294	335	consensus Apurinic/apyrimidinic endonuclease and r	96.46
KOG2243	5019	consensus Ca2+ release channel (ryanodine receptor	96.45
KOG4251	362	consensus Calcium binding protein [General functio	95.98
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	95.97
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	95.96
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	95.81
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	95.74
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	95.35
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	95.2
PTZ00312	356	inositol-1,4,5-triphosphate 5-phosphatase; Provisi	94.29
PLN03191	621	Type I inositol-1,4,5-trisphosphate 5-phosphatase	94.01
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	93.74
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	93.64
KOG1976	391	consensus Inositol polyphosphate 5-phosphatase, ty	92.77
PF08726	69	EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPr	92.59
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	92.38
COG5411	460	Phosphatidylinositol 5-phosphate phosphatase [Sign	91.97
PF05517	154	p25-alpha: p25-alpha ; InterPro: IPR008907 This fa	90.89
KOG3866	442	consensus DNA-binding protein of the nucleobindin	90.32
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	90.23
KOG0042	680	consensus Glycerol-3-phosphate dehydrogenase [Ener	90.17
KOG4578	421	consensus Uncharacterized conserved protein, conta	89.99
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	89.9
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	89.54
KOG4666	412	consensus Predicted phosphate acyltransferase, con	89.02
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	88.74
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	88.03
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	87.07
KOG3555	434	consensus Ca2+-binding proteoglycan Testican [Gene	86.88
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	86.48
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	86.08
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	85.75
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	85.72
KOG4251	362	consensus Calcium binding protein [General functio	85.48
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	85.41
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	85.4
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	84.11
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	83.97
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	82.67
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	82.52
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	82.0
KOG0169	746	consensus Phosphoinositide-specific phospholipase	81.61
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	81.15

>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional

Probab=100.00  E-value=9.4e-32  Score=271.26  Aligned_cols=197  Identities=27%  Similarity=0.410  Sum_probs=150.9

Q ss_pred             CCCceEEEeeccccccccCCCCc-cccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCcc
Q 013328           26 QQPCITCTTFNILAPIYKRLSNE-NCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  104 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~-~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  104 (445)
                      ...+||||||||++..|+..+.+ +|  +...+.|.+|+..|+++|..++|||||||||  ..+++.+.+...|..+||.
T Consensus       251 ~~~~frVmSYNILAd~ya~~dly~yc--p~~aL~W~yRk~lIl~EI~~~~aDIICLQEV--~~~~~~d~~~p~L~~~GY~  326 (606)
T PLN03144        251 SAGTFTVLSYNILSDLYATSDMYSYC--PPWALSWTYRRQNLLREIVGYRADILCLQEV--QSDHFEEFFAPELDKHGYQ  326 (606)
T ss_pred             CCCCEEEEEeeeccccccCcccccCC--CccccCHHHHHHHHHHHHHhcCCCEEEEeec--CHHHHHHHHHhhhhhcCce
Confidence            45689999999999988876654 45  3467899999999999999999999999999  4556777888899999999


Q ss_pred             EEEecCCCC-------CCceEEEEEecCcceEEeeEEEEecCCC----------------------Cceeeeeccccccc
Q 013328          105 NFKLARTNN-------RGDGLLTAVHKDYFRVVNYRDLLFNDFG----------------------DRVAQLLHVELIDP  155 (445)
Q Consensus       105 ~~~~~~~~~-------~~~G~ai~~~s~~~~i~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~  155 (445)
                      .++..+.+.       ..+|+|||||+++|.+++...+.|....                      ++++.++.++....
T Consensus       327 Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~  406 (606)
T PLN03144        327 ALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFG  406 (606)
T ss_pred             EEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEEEEEEEecc
Confidence            998776542       4679999999999999998888664321                      11233333322110


Q ss_pred             ccccccCCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhh
Q 013328          156 FSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR  231 (445)
Q Consensus       156 ~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~  231 (445)
                      .........++.|+|+||||+|.+  .....|+.|+..|++.++++...   .+.|+|||||||+.|++.+|++|.
T Consensus       407 ~~~~~~~~~~~~l~VaNTHL~~~p--~~~dvRl~Q~~~Ll~~l~~~~~~---~~~PvIlcGDFNS~P~S~vy~lLt  477 (606)
T PLN03144        407 NQGADNGGKRQLLCVANTHIHANQ--ELKDVKLWQVHTLLKGLEKIAAS---ADIPMLVCGDFNSVPGSAPHCLLA  477 (606)
T ss_pred             cccccCCCCccEEEEEEeeeccCC--ccchhHHHHHHHHHHHHHHHhhc---CCCceEEeccCCCCCCChhhhhhh
Confidence            000001123467999999999865  45678999999999999987643   578999999999999999999985

>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]

Probab=99.97  E-value=1.5e-30  Score=249.00  Aligned_cols=369  Identities=29%  Similarity=0.375  Sum_probs=241.8

Q ss_pred             ceEEEeeccccccccCC-CCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           29 CITCTTFNILAPIYKRL-SNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~-~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      .|+||||||+++.+... ...+.+.+...+.|..|...|+.++..++|||+|||||+  .+++...+...++..||..++
T Consensus       116 ~ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq--~d~~~~~~~~~~~~lGy~~~~  193 (495)
T KOG2338|consen  116 DFTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQ--EDHYPEFWQPLLGKLGYTGFF  193 (495)
T ss_pred             ceEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhh--hhhhHHHHHHHHhhcCceEEE
Confidence            79999999999866331 122334567889999999999999999999999999994  456777888999999999988


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCCC------CceeeeecccccccccccccCC-CCceEEEEEeeeeCCCC
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPHD  180 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~g~~v~v~n~HL~~~~~  180 (445)
                      ..+.+.+..||||+|++.+|.++....+.+.+..      ++++..+.++.       ++.. .++.+.|+||||.+++ 
T Consensus       194 ~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f-------~~~~~~sq~ilVanTHLl~np-  265 (495)
T KOG2338|consen  194 KRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEF-------RLVDESSQGILVANTHLLFNP-  265 (495)
T ss_pred             EeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEEEe-------cccCcccCceEEEeeeeeecC-
Confidence            8888889999999999999999998888776443      44555554442       2222 3679999999999976 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCCC
Q 013328          181 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHR  260 (445)
Q Consensus       181 ~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~  260 (445)
                       .....|++|...|++.++++.+... ...|+++|||||+.|+++.|..++..++.-..+.++.  .+....|... +..
T Consensus       266 -~~~~vrL~Q~~iiL~~~~~~~~~~~-~~~pi~l~GDfNt~p~~~~y~fl~~~~l~~~~~~~~~--~e~s~~~~~~-~~~  340 (495)
T KOG2338|consen  266 -SRSDVRLAQVYIILAELEKMSKSSK-SHWPIFLCGDFNTEPDSPPYLFLTSGPLIYDGRAAHT--IEDSHRYVFS-ESR  340 (495)
T ss_pred             -cccchhhHHHHHHHHHHHHHHhhcc-cCCCeEEecCCCCCCCCCcchhhhcCCceeccccccc--cccccccccc-ccc
Confidence             4567799999999999999887533 4679999999999999999999998888754444431  1222222221 111


Q ss_pred             CcccccceeeecCCcccccccccchhHHHHHHHHHhhhhccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCC
Q 013328          261 GNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKH  339 (445)
Q Consensus       261 ~~~~rIDyi~~~~~~~~~~~~~~s~~~~v~~~~~~~~~~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~  339 (445)
                      ......               ..-|..+.+.............-.++|... |++.. =..+..|+....+.+++..++.
T Consensus       341 ~ge~g~---------------d~~~~~~~~s~~k~~~~~~s~~~~e~~t~~g~~~~~-~~~~~~~h~~~~~~~s~~s~g~  404 (495)
T KOG2338|consen  341 LGEEGE---------------DDEEESAAFSRGKGQLSQASIPKPEIFTATGDKNHL-VELTYSEHESLKVNVSLYSHGY  404 (495)
T ss_pred             cCcccc---------------cchhhhhhhccCccccccccCCCccccccccccchh-HHHHHHHhhhhhcccceeeccc
Confidence            111111               112555555544443322222333445443 22222 2334444443223333222323


Q ss_pred             CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCC
Q 013328          340 GLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWP  419 (445)
Q Consensus       340 ~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  419 (445)
                      .....  +...-  |.++.|..+|..=.....+.......+...+-.  +.+   ....++.....+...+.++.++-||
T Consensus       405 ~~~~~--~~~~~--~~gep~vt~~~~~~~g~~dyif~~~~~~~~~~~--~~~---~~~~ikl~~~l~ip~~~e~~k~~~p  475 (495)
T KOG2338|consen  405 GLVHT--ENAWL--DRGEPGVTNYALTWKGTLDYIFYSPGDCKQSNR--EFE---EDEAIKLKGLLRIPSPQEMWKAGQP  475 (495)
T ss_pred             cccch--hhccc--cCCCcceecHHhhhccceeeEEeccCcccccch--hhh---cccceeEEEEecCCCHHHhhccCCC
Confidence            33332  22221  788889999976653333322222222122211  111   1335667777777788888899999


Q ss_pred             CC-CCCCCCcceeEEeeec
Q 013328          420 EN-YSLSDHARLTVVFSPI  437 (445)
Q Consensus       420 ~~-~~~~~~~~~~~~~~~~  437 (445)
                      .+ +=-|||-.|.++|++.
T Consensus       476 ~~~~~~SDH~aL~~~~~~~  494 (495)
T KOG2338|consen  476 PNGRYGSDHIALVAQFSLV  494 (495)
T ss_pred             CCCCCcccceEeeEeeEee
Confidence            88 5559999999999873

>PRK11756 exonuclease III; Provisional

Probab=99.93  E-value=5.2e-25  Score=207.77  Aligned_cols=204  Identities=16%  Similarity=0.180  Sum_probs=130.3

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      |||+||||++.                   ..|...++++|++.+||||||||++.....+.   ...+...||.+++..
T Consensus         1 mri~T~Nv~g~-------------------~~~~~~i~~~i~~~~pDIi~LQE~~~~~~~~~---~~~~~~~gy~~~~~~   58 (268)
T PRK11756          1 MKFVSFNINGL-------------------RARPHQLEAIIEKHQPDVIGLQETKVHDEMFP---LEEVEALGYHVFYHG   58 (268)
T ss_pred             CEEEEEEcCCH-------------------HHHHHHHHHHHHhcCCCEEEEEecccccccCC---HHHHHhcCCEEEEeC
Confidence            69999999843                   23567899999999999999999964432221   122334688776643


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCCC-CceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC---CChh
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS---SLSL  185 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~---~~~~  185 (445)
                        .....|+||+  |+ +|+..... .++... ...+..+         .+++...++.+.|+|+|+..+...   ....
T Consensus        59 --~~~~~Gvail--Sr-~p~~~~~~-~~~~~~~~~~~r~l---------~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~  123 (268)
T PRK11756         59 --QKGHYGVALL--SK-QTPIAVRK-GFPTDDEEAQRRII---------MATIPTPNGNLTVINGYFPQGESRDHPTKFP  123 (268)
T ss_pred             --CCCCCEEEEE--EC-CChHHeEE-CCCCccccccCCEE---------EEEEEcCCCCEEEEEEEecCCCCCCcchhHH
Confidence              3345699999  66 56654332 222111 1111111         123333445599999998543211   1123


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--------------------------hhHhhhhCCCcccc
Q 013328          186 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------------VYKFLRSQGFVSSY  239 (445)
Q Consensus       186 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------------~~~~l~~~g~~d~~  239 (445)
                      .|.++...|.+.+.+..+    .+.|+|||||||..|.+.                          .++.+.+.||+|+|
T Consensus       124 ~r~~~~~~l~~~l~~~~~----~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~~~~~~~~~~~~er~~~~~l~~~~l~D~~  199 (268)
T PRK11756        124 AKRQFYQDLQNYLETELS----PDNPLLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWLDRLMDWGLVDTF  199 (268)
T ss_pred             HHHHHHHHHHHHHHHHhc----cCCCEEEEeecccCCChhhcCCcccChHHhcccCCccCCHHHHHHHHHHHhCCcEeeh
Confidence            566777878777766533    567999999999987754                          34556677999999


Q ss_pred             cccccCCCCCCCcceeccCC---CCcccccceeeecCCc
Q 013328          240 DTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       240 ~~~~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      +..++... ..+||..++..   .....||||||+++..
T Consensus       200 R~~~p~~~-~~~T~~~~~~~~~~~~~g~RIDyi~~s~~~  237 (268)
T PRK11756        200 RQLNPDVN-DRFSWFDYRSKGFDDNRGLRIDLILATQPL  237 (268)
T ss_pred             hhhCCCCC-CcccCcCCcccccccCCceEEEEEEeCHHH
Confidence            99887522 35677655432   1246799999997554

>TIGR03395 sphingomy sphingomyelin phosphodiesterase

Probab=99.92  E-value=7.7e-24  Score=199.55  Aligned_cols=218  Identities=15%  Similarity=0.168  Sum_probs=139.2

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHh-hccCccEEEe
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRL-SDAGYVNFKL  108 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l-~~~gy~~~~~  108 (445)
                      ||||||||+...+.         ......|..|.+.|++.+...+|||||||||+.  ....+.+...| ..++|.....
T Consensus         1 lkVmtyNv~~l~~~---------~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~--~~~~~~l~~~L~~~yp~~~~~~   69 (283)
T TIGR03395         1 IKILSHNVYMLSTN---------LYPNWGQMERADLIASADYIKNQDVVILNEAFD--TSASKRLLDNLREEYPYQTDVI   69 (283)
T ss_pred             CeEEEEEeeeeccc---------ccCCccHhHHHHHHHHhhcccCCCEEEEecccc--hHHHHHHHHHHHhhCCceEeec
Confidence            68999999854211         112345889999999999999999999999953  22233344444 3466654322


Q ss_pred             cCC--------------CCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEee
Q 013328          109 ART--------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTH  174 (445)
Q Consensus       109 ~~~--------------~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~H  174 (445)
                      ++.              .....|++|+  |+ +||+......|+..... ...    ..+.+..+++..+|..+.|+|||
T Consensus        70 g~~~~g~~~~~g~~~~~~~~~~G~~iL--Sr-~Pi~~~~~~~f~~~~~~-d~~----~~kg~l~a~i~~~g~~~~v~~TH  141 (283)
T TIGR03395        70 GRSKKGWDKTLGNYSSSALEDGGVAIV--SK-WPIEEKIQYIFNKGCGA-DNL----SNKGFAYVKINKNGKKFHVIGTH  141 (283)
T ss_pred             ccccccchhccccccccCccCCEEEEE--EC-CCccccEEEEccCCCCC-ccc----cCCceEEEEEecCCeEEEEEEeC
Confidence            221              1224599999  99 99998877766532210 000    01122335566678999999999


Q ss_pred             eeCCCCC----CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhC-CCcccccccccCCCCC
Q 013328          175 LLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSYDTAHQYTDAD  249 (445)
Q Consensus       175 L~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~~~~~~~~~~~  249 (445)
                      |.+....    .....|..|+..|.+.+.+..   ...+.|+|||||||+.|.+..|+.|... +..+..     +. +.
T Consensus       142 L~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~---~~~~~pvIl~GDfN~~~~s~~~~~ml~~l~~~~p~-----~~-g~  212 (283)
T TIGR03395       142 LQAQDSMCSKLGPASIRANQLNEIQDFIDSKN---IPKDETVLIGGDLNVNKGSNEYHDMFKTLNVSEPR-----YV-GV  212 (283)
T ss_pred             CCCCcccccccccHHHHHHHHHHHHHHHhhcc---CCCCceEEEEeeCCCCCCCHHHHHHHHHhcccCCC-----cC-CC
Confidence            9764321    125789999999998886421   1246789999999999999998877432 332211     11 12


Q ss_pred             CCcceeccCC-------CCcccccceeeecCCc
Q 013328          250 AHKWVSHRNH-------RGNICGVDFIWLLNPN  275 (445)
Q Consensus       250 ~~t~~~~~~~-------~~~~~rIDyi~~~~~~  275 (445)
                      ..||....|.       .+...||||||+++..
T Consensus       213 ~~T~d~~~N~~a~~~~~~~~~~~lDyvl~~~~~  245 (283)
T TIGR03395       213 PATWDATTNSIAKYYYPKEEPEYLDYIFVSKSH  245 (283)
T ss_pred             CCCcCCCcCchhhhhcCCCCcceEEEEEEECCC
Confidence            4566553321       2334599999998553

Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.

>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]

Probab=99.91  E-value=3.4e-24  Score=193.88  Aligned_cols=203  Identities=23%  Similarity=0.377  Sum_probs=129.3

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      |||+||||.+.                   ..|.+.+.+++.+.+||||||||++.....+.   ...+...||+.++..
T Consensus         1 mkI~SwNVNgi-------------------Rar~~~~~~~l~~~~pDVlclQEtK~~~~~fp---~~~~~~~GY~~~~~~   58 (261)
T COG0708           1 MKIASWNVNGL-------------------RARLKKLLDWLEEEQPDVLCLQETKAQDEQFP---REELEALGYHHVFNH   58 (261)
T ss_pred             CeeEEEehhhH-------------------HHHHHHHHHHHHHhCCCEEEEEecccCcccCC---HhHHhhCCceEEEec
Confidence            68999999965                   23778899999999999999999987665555   333445689544432


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecC--CCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFND--FGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      .. ....||||++|..   +. .....++.  ..+..++.+.+.         +    ..|.|+|+  |.|.+......|
T Consensus        59 gq-KgysGVailsr~~---~~-~v~~g~~~~~~~d~e~R~I~a~---------~----~~~~v~~~--Y~PnG~~~~~~k  118 (261)
T COG0708          59 GQ-KGYSGVAILSKKP---PD-DVRRGFPGEEEDDEEGRVIEAE---------F----DGFRVINL--YFPNGSSIGLEK  118 (261)
T ss_pred             Cc-CCcceEEEEEccC---ch-hhhcCCCCCccccccCcEEEEE---------E----CCEEEEEE--EcCCCCCCCCcc
Confidence            22 5556999995444   22 11122222  112223322222         1    22889998  777654323344


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc-----------------------chhHhhhhCCCccccccccc
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG-----------------------HVYKFLRSQGFVSSYDTAHQ  244 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s-----------------------~~~~~l~~~g~~d~~~~~~~  244 (445)
                      ...-....+.+..++.+....+.|+|+|||||..|..                       ..+..|...||+|+++..++
T Consensus       119 ~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p  198 (261)
T COG0708         119 FDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHP  198 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhhCC
Confidence            4444444444444443333467999999999987642                       12456778899999999987


Q ss_pred             CCCCCCCcceeccCC---CCcccccceeeecCCcc
Q 013328          245 YTDADAHKWVSHRNH---RGNICGVDFIWLLNPNK  276 (445)
Q Consensus       245 ~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~~  276 (445)
                      .++  .+||.+++..   ...+.||||+++++..+
T Consensus       199 ~~~--~YTwW~YR~~~~~~n~G~RID~~l~S~~L~  231 (261)
T COG0708         199 EPE--KYTWWDYRANAARRNRGWRIDYILVSPALA  231 (261)
T ss_pred             CCC--cccccccccchhhhcCceeEEEEEeCHHHH
Confidence            654  3777776632   22467999999977654

>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]

Probab=99.88  E-value=6.6e-23  Score=187.93  Aligned_cols=224  Identities=19%  Similarity=0.184  Sum_probs=157.9

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHH-hhccCccEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKR-LSDAGYVNF  106 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~-l~~~gy~~~  106 (445)
                      -.|||+|.|+|+..|....            ...|...+-+.+.....||+.|||||... ++. .|.+. -..++|..+
T Consensus         7 ~~lriltlN~Wgip~~Sk~------------R~~Rm~~~g~~l~~E~yDiv~LQEvWs~e-D~~-~L~~~~ss~yPysh~   72 (422)
T KOG3873|consen    7 LELRILTLNIWGIPYVSKD------------RRHRMDAIGDELASEKYDIVSLQEVWSQE-DFE-YLQSGCSSVYPYSHY   72 (422)
T ss_pred             heeeeeEeeccccccccch------------hHHHHHHHhHHHhhcccchhhHHHHHHHH-HHH-HHHHhccccCchHHh
Confidence            4699999999987544432            24588899999999999999999998543 333 33443 334888877


Q ss_pred             EecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccc--ccccccccCCCCceEEEEEeeeeCCCC---C
Q 013328          107 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELI--DPFSQCRNGDLRQEILIVNTHLLFPHD---S  181 (445)
Q Consensus       107 ~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~v~v~n~HL~~~~~---~  181 (445)
                      |+  ++--+.|+++|  || +||+++....++-.+ ....+.+-.+-  ..+..+.+..+|+.+.++||||+++-+   +
T Consensus        73 FH--SGimGaGL~vf--SK-~PI~~t~~~~y~lNG-~p~~i~rGDWf~GK~Vgl~~l~~~g~~v~~yntHLHAeY~rq~D  146 (422)
T KOG3873|consen   73 FH--SGIMGAGLCVF--SK-HPILETLFHRYSLNG-YPHAIHRGDWFGGKGVGLTVLLVGGRMVNLYNTHLHAEYDRQND  146 (422)
T ss_pred             hh--cccccCceEEe--ec-CchhhhhhhccccCC-ccceeeeccccccceeEEEEEeeCCEEeeeeehhccccccccCc
Confidence            75  45557899999  99 899987766554332 11111111110  011124555678999999999988643   4


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCC---------------
Q 013328          182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYT---------------  246 (445)
Q Consensus       182 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~---------------  246 (445)
                      .+...|..|+..+.+.++...+    ...-||++||||+.|.+-.++.|++.|++|+|...+...               
T Consensus       147 ~YL~HR~~QAwdlaqfi~~t~q----~~~vVI~~GDLN~~P~dl~~~ll~~a~l~daw~~~h~~q~e~~~~r~s~~~~l~  222 (422)
T KOG3873|consen  147 EYLCHRVAQAWDLAQFIRATRQ----NADVVILAGDLNMQPQDLGHKLLLSAGLVDAWTSLHLDQCESDSFRLSEDKELV  222 (422)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhc----CCcEEEEecCCCCCccccceeeeeccchhhhHhhhchhhhcCcccccchhhhhh
Confidence            5778899999999999988765    567799999999999999999999999999998755321               


Q ss_pred             -----CCCCCcceeccCCCCc--ccccceeeecCCc
Q 013328          247 -----DADAHKWVSHRNHRGN--ICGVDFIWLLNPN  275 (445)
Q Consensus       247 -----~~~~~t~~~~~~~~~~--~~rIDyi~~~~~~  275 (445)
                           +....+|.+.......  .+||||+|+++..
T Consensus       223 ~g~tcd~~~N~y~~aqk~~ddp~~~RiDYvl~k~~~  258 (422)
T KOG3873|consen  223 EGNTCDSPLNCYTSAQKREDDPLGKRIDYVLVKPGD  258 (422)
T ss_pred             cCCcccCcchhhhHHHhCCCCccceeeeEEEEcCcc
Confidence                 1123445542222223  6799999998755

>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]

Probab=99.88  E-value=2.7e-22  Score=184.82  Aligned_cols=198  Identities=24%  Similarity=0.338  Sum_probs=139.7

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEe
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKL  108 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~  108 (445)
                      .++|||||+++..|.+...+...  ..++.|..|.+.|+++|..++|||+|||||+  ...+.+.+.+.|+..||...+.
T Consensus        30 ~ftimTYN~Laq~y~~r~~y~~s--~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd--~~~~~~fw~~~l~~~gY~~if~  105 (378)
T COG5239          30 DFTIMTYNVLAQTYATRKMYPYS--GWALKWSYRSRLLLQELLYYNADILCLQEVD--AEDFEDFWKDQLGKLGYDGIFI  105 (378)
T ss_pred             eeEEEehhhhhhhhccccccCCc--hhhhhhHHHHHHHHHHHhccCCceeeeehhh--hhHHHHHHHHHhcccccceEEe
Confidence            59999999999999988776442  5688999999999999999999999999994  4567888999999999999887


Q ss_pred             cCCC----------CCCceEEEEEec----CcceEEeeEEEEecCCC-------------Cceeeeeccccccccccccc
Q 013328          109 ARTN----------NRGDGLLTAVHK----DYFRVVNYRDLLFNDFG-------------DRVAQLLHVELIDPFSQCRN  161 (445)
Q Consensus       109 ~~~~----------~~~~G~ai~~~s----~~~~i~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  161 (445)
                      .+.+          ....||+|+++.    +++-++-.....|...-             .++....++.+...+.....
T Consensus       106 ~k~~k~~~m~~~d~t~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~w~~l~~~l~n  185 (378)
T COG5239         106 PKERKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIAWVCLFVGLFN  185 (378)
T ss_pred             cCCCcccccccccccccceEEEEEEeccccchhhhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcchhheeeeecc
Confidence            6554          134699999876    21112211111111000             11111111111111122334


Q ss_pred             CCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCC-----------CCCcEEEeecCCCCcCcchhHhh
Q 013328          162 GDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNL-----------KPIPIILCGDWNGSKRGHVYKFL  230 (445)
Q Consensus       162 ~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~-----------~~~pvIl~GDFN~~p~s~~~~~l  230 (445)
                      +.+|.++.|++||++|.+  ...+.++-|+..+.+.++....+...           +..++.++||||+...+.+|..|
T Consensus       186 ~e~gd~~~va~Th~~w~~--~~~dvk~iq~s~l~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~~s~vy~~l  263 (378)
T COG5239         186 KEPGDTPYVANTHLPWDP--KYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASLVYKFL  263 (378)
T ss_pred             CCCCCceeEEeccccccC--CCCchheehhhHHHHHHHHHhhhcCCcchhccccccCcccccccCCCccceecceehhhh
Confidence            457999999999999954  55677899999999999887765422           12267999999999999888877


Q ss_pred             hh
Q 013328          231 RS  232 (445)
Q Consensus       231 ~~  232 (445)
                      ..
T Consensus       264 ~~  265 (378)
T COG5239         264 VT  265 (378)
T ss_pred             hh
Confidence            54

>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]

Probab=99.87  E-value=1.5e-21  Score=176.17  Aligned_cols=207  Identities=16%  Similarity=0.074  Sum_probs=128.7

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccCh----hhHHHHHHHHhhccCcc
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGN----EELVDMYEKRLSDAGYV  104 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~----~~~~~~l~~~l~~~gy~  104 (445)
                      .++|+||||+...   .          ..++..+.+.+.+.|.+..||||||||+....    ..+.++........+..
T Consensus         9 ~~~v~TyNih~~~---~----------~~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~~~   75 (259)
T COG3568           9 RFKVLTYNIHKGF---G----------AFDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGLAP   75 (259)
T ss_pred             eeEEEEEEEEEcc---C----------ccCceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcCCc
Confidence            4899999999553   1          11345577999999999999999999996311    12222222222222222


Q ss_pred             EEEecC-----CCCCCceEEEEEecCcceEEeeEEEEecCC---CCceeeeecccccccccccccCC-CCceEEEEEeee
Q 013328          105 NFKLAR-----TNNRGDGLLTAVHKDYFRVVNYRDLLFNDF---GDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHL  175 (445)
Q Consensus       105 ~~~~~~-----~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~g~~v~v~n~HL  175 (445)
                      +.+...     ......|++|+  |+ +|+.......++..   ..+.+..           +++.. .|+++.|+|+||
T Consensus        76 ~~~~~~~~~a~~~~~~~GnaiL--S~-~pi~~v~~~~lp~~~~~~~Rgal~-----------a~~~~~~g~~l~V~~~HL  141 (259)
T COG3568          76 YWWSGAAFGAVYGEGQHGNAIL--SR-LPIRDVENLALPDPTGLEPRGALL-----------AEIELPGGKPLRVINAHL  141 (259)
T ss_pred             cccchhhhhhhcccceeeeEEE--ec-CcccchhhccCCCCCCCCCceeEE-----------EEEEcCCCCEEEEEEEec
Confidence            221111     12334599999  76 88888888877753   2233332           23333 477999999999


Q ss_pred             eCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCC--cccccc-cccCCCCCCCc
Q 013328          176 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGF--VSSYDT-AHQYTDADAHK  252 (445)
Q Consensus       176 ~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~--~d~~~~-~~~~~~~~~~t  252 (445)
                      .     .....|.+|++.|++.+.-.      ...|+|+|||||..|.++.|+.....-+  .++... ..........+
T Consensus       142 ~-----l~~~~R~~Q~~~L~~~~~l~------~~~p~vl~GDFN~~p~s~~yr~~~~~~~~~~~~~~~~~~~a~~~~~~t  210 (259)
T COG3568         142 G-----LSEESRLRQAAALLALAGLP------ALNPTVLMGDFNNEPGSAEYRLAARSPLNAQAALTGAFAPAVGRTIRT  210 (259)
T ss_pred             c-----ccHHHHHHHHHHHHhhccCc------ccCceEEEccCCCCCCCccceeccCCchhhccccccccCcccCcccCC
Confidence            4     34577999999998832211      3349999999999999999966543211  111111 11111111357


Q ss_pred             ceeccCCCCcccccceeeecCCccc
Q 013328          253 WVSHRNHRGNICGVDFIWLLNPNKY  277 (445)
Q Consensus       253 ~~~~~~~~~~~~rIDyi~~~~~~~~  277 (445)
                      |+++.+    ..+|||||+++....
T Consensus       211 fps~~p----~lriD~Ifvs~~~~i  231 (259)
T COG3568         211 FPSNTP----LLRLDRIFVSKELAI  231 (259)
T ss_pred             CCCCCc----cccccEEEecCcccE
Confidence            877764    348999999875543

>TIGR00195 exoDNase_III exodeoxyribonuclease III

Probab=99.87  E-value=6e-21  Score=178.68  Aligned_cols=200  Identities=20%  Similarity=0.312  Sum_probs=124.0

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      |||+||||+...                   .+...++++|...+||||||||+......+.   ...+...||..++.+
T Consensus         1 mri~t~Ni~g~~-------------------~~~~~~~~~l~~~~~DIi~LQE~~~~~~~~~---~~~~~~~g~~~~~~~   58 (254)
T TIGR00195         1 MKIISWNVNGLR-------------------ARLHKGLAWLKENQPDVLCLQETKVQDEQFP---LEPFHKEGYHVFFSG   58 (254)
T ss_pred             CEEEEEEcCcHH-------------------HhHHHHHHHHHhcCCCEEEEEecccchhhCC---HHHhhcCCcEEEEec
Confidence            699999998542                   1335689999999999999999964332221   233344688776654


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCC--CCCChhhH
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH--DSSLSLVR  187 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~--~~~~~~~R  187 (445)
                      .  ....|+||++|...+.+.  ..+.... .+..+..+..         .+    ..+.++|+|+....  +......|
T Consensus        59 ~--~g~~Gvailsr~~~~~~~--~~~~~~~-~~~~~r~i~~---------~~----~~~~l~~~~~p~~~~~~~~~~~~r  120 (254)
T TIGR00195        59 Q--KGYSGVAIFSKEEPLSVR--RGFGVEE-EDAEGRIIMA---------EF----DSFLVINGYFPNGSRDDSEKLPYK  120 (254)
T ss_pred             C--CCcceEEEEEcCCcceEE--ECCCCcc-cccCCCEEEE---------EE----CCEEEEEEEccCCCCCCCccHHHH
Confidence            3  445699999654322221  1111111 0111121111         11    24899999885421  11123446


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------chhHhhhhCCCcccccccccCCC
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQYTD  247 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~~~  247 (445)
                      ..+...+.+.+.++..    .+.|+|+|||||..+..                    ..++.+.+.|++|+|+..++.  
T Consensus       121 ~~~~~~l~~~~~~~~~----~~~pvIi~GDfN~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~l~~~~l~D~~r~~~~~--  194 (254)
T TIGR00195       121 LQWLEALQNYLEKLVD----KDKPVLICGDMNIAPTEIDLHSPDENRNHTGFLPEEREWLDRLLEAGLVDTFRKFNPD--  194 (254)
T ss_pred             HHHHHHHHHHHHHHHh----cCCcEEEEeecccCCChhhccChhhcCCCcCcChHHHHHHHHHHHcCCEeeecccCCC--
Confidence            6777777777766533    46799999999998865                    246777778999999987765  


Q ss_pred             CCCCcceeccCC---CCcccccceeeecCCc
Q 013328          248 ADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       248 ~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      ...+||..++..   .+...||||||+++..
T Consensus       195 ~~~~T~~~~~~~~~~~~~g~RID~i~~s~~~  225 (254)
T TIGR00195       195 EGAYSWWDYRTKARDRNRGWRIDYFLVSEPL  225 (254)
T ss_pred             CCCCcccCCcCCccccCCceEEEEEEECHHH
Confidence            235777665422   1335699999996544

The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family

>PRK13911 exodeoxyribonuclease III; Provisional

Probab=99.86  E-value=5.3e-21  Score=176.88  Aligned_cols=199  Identities=19%  Similarity=0.285  Sum_probs=121.8

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHH-HHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEe
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRN-QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKL  108 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~-~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~  108 (445)
                      |||+||||.+..                   .|. ..+.++|.+.+||||||||++.....+.      +...||..++.
T Consensus         1 mki~swNVNgir-------------------~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~~------~~~~gY~~~~~   55 (250)
T PRK13911          1 MKLISWNVNGLR-------------------ACMTKGFMDFFNSVDADVFCIQESKMQQEQNT------FEFKGYFDFWN   55 (250)
T ss_pred             CEEEEEEeCChh-------------------HhhhhhHHHHHHhcCCCEEEEEeecccccccc------cccCCceEEEE
Confidence            699999999662                   123 3688999999999999999976554321      23458876654


Q ss_pred             cCCCCCCceEEEEEecCcceEEeeEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          109 ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       109 ~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      ........|+||++|.+...+.    ..+... .+..++.+...             -..++|+|+  |.|++.. ...|
T Consensus        56 ~~~~kgy~GVAi~~k~~~~~v~----~~~~~~~~d~eGR~I~~~-------------~~~~~l~nv--Y~Pn~~~-~~~r  115 (250)
T PRK13911         56 CAIKKGYSGVVTFTKKEPLSVS----YGINIEEHDKEGRVITCE-------------FESFYLVNV--YTPNSQQ-ALSR  115 (250)
T ss_pred             ecccCccceEEEEEcCCchheE----EcCCCCcccccCCEEEEE-------------ECCEEEEEE--EecCCCC-CCcc
Confidence            3333455699999665422221    111111 12223322211             135999999  6776532 2335


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------chhHhhhhCCCcccccccccCCC
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQYTD  247 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~~~  247 (445)
                      ..+-....+.+.++.+.. ..+.|+|+|||||..+..                    ..++.+...|++|+|+..++...
T Consensus       116 ~~~K~~~~~~~~~~l~~l-~~~~~~Ii~GD~Nva~~~~D~~~~~~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~~~  194 (250)
T PRK13911        116 LSYRMSWEVEFKKFLKAL-ELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKE  194 (250)
T ss_pred             hHHHHHHHHHHHHHHHhc-ccCCCEEEEccccCCCChhhccChhhcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCCCC
Confidence            544444444444444433 245799999999997652                    12455566799999999887532


Q ss_pred             CCCCcceecc---CCCCcccccceeeecCCc
Q 013328          248 ADAHKWVSHR---NHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       248 ~~~~t~~~~~---~~~~~~~rIDyi~~~~~~  275 (445)
                       ..+||.+++   .....+.||||||+++..
T Consensus       195 -~~yTww~~~~~~~~~n~g~RIDyilvs~~~  224 (250)
T PRK13911        195 -KAYTWWSYMQQARDKNIGWRIDYFLCSNPL  224 (250)
T ss_pred             -CCCccCCCcCCccccCCcceEEEEEEChHH
Confidence             346765544   123346799999997655

>TIGR00633 xth exodeoxyribonuclease III (xth)

Probab=99.86  E-value=1.2e-20  Score=176.90  Aligned_cols=201  Identities=20%  Similarity=0.306  Sum_probs=121.2

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHH-HHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEe
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRI-LDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKL  108 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i-~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~  108 (445)
                      |||+||||+...                   .+.+.+ +++|.+.+||||||||++.....+   ....+...||.+++.
T Consensus         1 lri~t~Nv~g~~-------------------~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~~---~~~~~~~~g~~~~~~   58 (255)
T TIGR00633         1 MKIISWNVNGLR-------------------ARLHKLFLDWLKEEQPDVLCLQETKVADEQF---PAELFEELGYHVFFH   58 (255)
T ss_pred             CEEEEEecccHH-------------------HHhhccHHHHHHhcCCCEEEEEeccCchhhC---CHhHhccCCceEEEe
Confidence            699999998552                   123455 899999999999999996432111   122334468877665


Q ss_pred             cCCCCCCceEEEEEecCcceEEeeEE-EEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCC--CCCChh
Q 013328          109 ARTNNRGDGLLTAVHKDYFRVVNYRD-LLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH--DSSLSL  185 (445)
Q Consensus       109 ~~~~~~~~G~ai~~~s~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~--~~~~~~  185 (445)
                      ........|+||+  ++ +++..... +.... .+..+..+.+             ..+.+.|+++|+..+.  +.....
T Consensus        59 ~~~~~~~~G~ail--sr-~~~~~~~~~~~~~~-~~~~~r~l~~-------------~~~~~~i~~vy~p~~~~~~~~~~~  121 (255)
T TIGR00633        59 GAKSKGYSGVAIL--SK-VEPLDVRYGFGGEE-HDEEGRVITA-------------EFDGFTVVNVYVPNGGSRGLERLE  121 (255)
T ss_pred             ecccCCcceEEEE--Ec-CCcceEEECCCCCc-ccCCCcEEEE-------------EECCEEEEEEEccCCCCCCchhHH
Confidence            4443345699999  44 44433222 11111 0111111111             1246999999885533  111224


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------chhHhhhhCCCcccccccccC
Q 013328          186 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQY  245 (445)
Q Consensus       186 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~  245 (445)
                      .|..+...+.+.+.+...    .+.|+|+|||||+.+..                    ..++.+.+.|+.|+|+..++.
T Consensus       122 ~r~~~~~~l~~~~~~~~~----~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~  197 (255)
T TIGR00633       122 YKLQFWDALFQYYEKELD----AGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEEREWFDELLEAGLVDTFRHFNPD  197 (255)
T ss_pred             HHHHHHHHHHHHHHHHHh----cCCcEEEEeecccCCChHHccChhhcCCCCCcCHHHHHHHHHHHHcCCEecchhhCCC
Confidence            566677767666554332    45799999999998742                    235666678999999887654


Q ss_pred             CCCCCCcceeccC---CCCcccccceeeecCC
Q 013328          246 TDADAHKWVSHRN---HRGNICGVDFIWLLNP  274 (445)
Q Consensus       246 ~~~~~~t~~~~~~---~~~~~~rIDyi~~~~~  274 (445)
                      .+ ..+||..+..   ......||||||+++.
T Consensus       198 ~~-~~~T~~~~~~~~~~~~~~~rID~i~~s~~  228 (255)
T TIGR00633       198 TE-GAYTWWDYRSGARDRNRGWRIDYFLVSEP  228 (255)
T ss_pred             CC-CcCcCcCCccCccccCCceEEEEEEECHH
Confidence            32 2467765542   1123469999999653

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK05421 hypothetical protein; Provisional

Probab=99.82  E-value=3.7e-19  Score=166.81  Aligned_cols=167  Identities=19%  Similarity=0.085  Sum_probs=95.9

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      .++||||||||+.....                  +....++.| ..+|||||||||+... ..    ...+...++.+.
T Consensus        41 ~~~lri~t~NI~~~~~~------------------~~~~~l~~l-~~~~DiI~LQEv~~~~-~~----~~~~~~~~~~~~   96 (263)
T PRK05421         41 EERLRLLVWNIYKQQRA------------------GWLSVLKNL-GKDADLVLLQEAQTTP-EL----VQFATANYLAAD   96 (263)
T ss_pred             CCceeEEEEEccccccc------------------cHHHHHHHh-ccCCCEEEEEecccCc-ch----HHHhhcccchHH
Confidence            45799999999965310                  123455555 8899999999996332 11    122222233322


Q ss_pred             Ee--cCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCC-CCceEEEEEeeeeCCCCCCC
Q 013328          107 KL--ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPHDSSL  183 (445)
Q Consensus       107 ~~--~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~v~v~n~HL~~~~~~~~  183 (445)
                      +.  .......+|+||+  |+ +|+.....+........        ..+....+.+.. .|+.+.|+||||.++..  .
T Consensus        97 ~~~~~~~~~~~~GvaiL--SR-~pi~~~~~~~~~~~~~~--------~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~--~  163 (263)
T PRK05421         97 QAPAFVLPQHPSGVMTL--SK-AHPVYCCPLREREPWLR--------LPKSALITEYPLPNGRTLLVVNIHAINFSL--G  163 (263)
T ss_pred             hccccccCCCccceeEe--ee-cccceeeccCCCCcccc--------CcceeEEEEEEeCCCCEEEEEEECccccCc--C
Confidence            21  1123346799999  88 88876544421111000        001111123333 46679999999965321  2


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--hhHhhh-hCCCcc
Q 013328          184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--VYKFLR-SQGFVS  237 (445)
Q Consensus       184 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--~~~~l~-~~g~~d  237 (445)
                      ...|..|+..+.+.+..       ...|+|||||||+.+...  .++.+. ..|+.+
T Consensus       164 ~~~r~~q~~~l~~~~~~-------~~~p~Il~GDFN~~~~~~~~~l~~~~~~~~l~~  213 (263)
T PRK05421        164 VDVYSKQLEPIGDQIAH-------HSGPVILAGDFNTWSRKRMNALKRFARELGLKE  213 (263)
T ss_pred             hHHHHHHHHHHHHHHHh-------CCCCEEEEcccccCcccchHHHHHHHHHcCCCc
Confidence            35688888888777754       356999999999976532  344333 335543

>PTZ00297 pantothenate kinase; Provisional

Probab=99.76  E-value=2.8e-17  Score=182.78  Aligned_cols=170  Identities=18%  Similarity=0.248  Sum_probs=106.7

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc-CCCcEEEEeecccCh---------hhHHHHHHH
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY-ERSSIICLQEFWVGN---------EELVDMYEK   96 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~-~~~DII~LQEv~~~~---------~~~~~~l~~   96 (445)
                      ..+||||||||+.+...      +      ..|  ..+.+...|.. .+|||||||||....         ..+...+..
T Consensus         8 ~~~l~VlTyNv~~~~~~------~------~~~--~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~   73 (1452)
T PTZ00297          8 CAQARVLSYNFNILPRG------C------GGF--QHERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVD   73 (1452)
T ss_pred             CCceEEEEEEccccCCC------c------ccc--cHHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHH
Confidence            45799999999855210      0      112  13677778887 478999999995321         113345566


Q ss_pred             HhhccCccEEEecCCCC----------CCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCC--
Q 013328           97 RLSDAGYVNFKLARTNN----------RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDL--  164 (445)
Q Consensus        97 ~l~~~gy~~~~~~~~~~----------~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  164 (445)
                      .+...||.++...+...          ...|+||+  || |||.....+.++........     ..+....+.+..+  
T Consensus        74 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~AIL--SR-~PI~~~~~~~l~~~~~~~~~-----~~RG~L~a~I~vp~~  145 (1452)
T PTZ00297         74 ELKARGFHHYVISKQPSYLTMLRYNVCSDNGLIIA--SR-FPIWQRGSYTFRNHERGEQS-----VRRGCLFAEVEVPLA  145 (1452)
T ss_pred             HHHhcCCceeEeecCccccccccCccccCCEEEEE--EC-CChhhceeeecCcccccccc-----cccceEEEEEEcccc
Confidence            66667887665443331          34599999  99 99999999988753211000     0011111333322  


Q ss_pred             ---CceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHc-----CCCCCcEEEeecCCCC
Q 013328          165 ---RQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEH-----NLKPIPIILCGDWNGS  221 (445)
Q Consensus       165 ---g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~-----~~~~~pvIl~GDFN~~  221 (445)
                         ++.+.|+||||.+..+.   ..|.+|++.+.++++..++..     ...+.|+|||||||+.
T Consensus       146 ~g~~~~v~v~~tHL~~~~~~---~~R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~  207 (1452)
T PTZ00297        146 EGGSQRIVFFNVHLRQEDSL---PSTSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNIN  207 (1452)
T ss_pred             CCCCceEEEEEeCCCCCCCc---chHHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCc
Confidence               35899999999764332   458888888888877522211     1255699999999965

>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]

Probab=99.73  E-value=5.4e-17  Score=143.41  Aligned_cols=209  Identities=15%  Similarity=0.114  Sum_probs=141.6

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      .-++++||||..+.              ......|.+++...|+-++|||||||||-   +...+.+.+. . ..|..++
T Consensus        98 ~~~S~~~WnidgLd--------------ln~l~~RMrAv~H~i~l~sPdiiflQEV~---p~~y~~~~K~-~-s~y~i~~  158 (349)
T KOG2756|consen   98 SMFSLITWNIDGLD--------------LNNLSERMRAVCHYLALYSPDVIFLQEVI---PPYYSYLKKR-S-SNYEIIT  158 (349)
T ss_pred             cEEEEEEeeccccc--------------cchHHHHHHHHHHHHHhcCCCEEEEeecC---chhhHHHHHh-h-hheeEEE
Confidence            45788888887552              11234589999999999999999999993   3444555552 2 2455554


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCCC-CceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhh
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLV  186 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~  186 (445)
                      ...  ....+.+++.+|+ +.+.+...+.|+... .+...           .+...++|.++.+.|+||.++..+  ...
T Consensus       159 ~~~--~~~~~~~~l~~s~-~~Vks~~~i~F~NS~M~R~L~-----------I~Ev~v~G~Kl~l~tsHLEStr~h--~P~  222 (349)
T KOG2756|consen  159 GHE--EGYFTAIMLKKSR-VKVKSQEIIPFPNSKMMRNLL-----------IVEVNVSGNKLCLMTSHLESTRGH--APE  222 (349)
T ss_pred             ecc--ceeeeeeeeehhh-cCccccceeccCcchhhheeE-----------EEEEeecCceEEEEeccccCCCCC--ChH
Confidence            322  2234666666677 888888888776653 12222           244556889999999999986643  467


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCCCC--c--
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRG--N--  262 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~~--~--  262 (445)
                      |..|....++.+++.+..+  ++..||++||+|- .+..+-+.-.-.|++|+|..+... +....||.+..|...  .  
T Consensus       223 r~~qF~~~~~k~~EaIe~l--PnA~ViFGGD~Nl-rD~ev~r~~lPD~~vDvWE~lg~p-~~~~FTwDT~~N~nl~G~~a  298 (349)
T KOG2756|consen  223 RMNQFKMVLKKMQEAIESL--PNATVIFGGDTNL-RDREVTRCGLPDNIVDVWEFLGKP-KHCQFTWDTQMNSNLGGTAA  298 (349)
T ss_pred             HHHHHHHHHHHHHHHHHhC--CCceEEEcCcccc-hhhhcccCCCCchHHHHHHHhCCC-CcCceeeecccCcccchhHH
Confidence            9999998889998888765  7778999999997 333333322345778888887632 234688988775422  1  


Q ss_pred             -ccccceeeecCCc
Q 013328          263 -ICGVDFIWLLNPN  275 (445)
Q Consensus       263 -~~rIDyi~~~~~~  275 (445)
                       ..|+|.||.+...
T Consensus       299 ~k~RfDRi~~r~~~  312 (349)
T KOG2756|consen  299 CKLRFDRIFFRAAA  312 (349)
T ss_pred             HHHHHHHHhhhhhh
Confidence             2389999986543

>smart00476 DNaseIc deoxyribonuclease I

Probab=99.73  E-value=4.7e-16  Score=144.52  Aligned_cols=169  Identities=15%  Similarity=0.075  Sum_probs=105.6

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhc---cCcc
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD---AGYV  104 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~---~gy~  104 (445)
                      ..|||+||||+.+.            .....|..|.+.|++.|+  ++|||++|||...+......+...|..   .+|.
T Consensus        16 ~~l~I~SfNIr~fg------------d~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~   81 (276)
T smart00476       16 ASLRICAFNIQSFG------------DSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYS   81 (276)
T ss_pred             CcEEEEEEECcccC------------CccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCce
Confidence            46999999999552            133469999999999998  789999999954332222233333332   3687


Q ss_pred             EEEecCCCC--CCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCC-CCceEEEEEeeeeCCCCC
Q 013328          105 NFKLARTNN--RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPHDS  181 (445)
Q Consensus       105 ~~~~~~~~~--~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~v~v~n~HL~~~~~~  181 (445)
                      ++..++.+.  .++-.+++||++++.+++...+  ++.+.  +........+.+...+... .+..|.++++|+..    
T Consensus        82 ~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~~f--~d~~~--~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H~~p----  153 (276)
T smart00476       82 YVSSEPLGRNSYKEQYLFLYRSDLVSVLDSYLY--DDGCE--CGNDVFSREPFVVKFSSPSTAVKEFVIVPLHTTP----  153 (276)
T ss_pred             EEecCCCCCCCCCEEEEEEEecceEEEccccee--cCCCC--CccccccccceEEEEEeCCCCCccEEEEEecCCh----
Confidence            776655433  3457999999999998876544  44221  0000000001111122222 34689999999943    


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcC
Q 013328          182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR  223 (445)
Q Consensus       182 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~  223 (445)
                         ..+.+++..|.+.+....++.  ...|+||+||||+.++
T Consensus       154 ---~~~~~e~~aL~~v~~~~~~~~--~~~~villGDFNa~~~  190 (276)
T smart00476      154 ---EAAVAEIDALYDVYLDVRQKW--GTEDVIFMGDFNAGCS  190 (276)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhh--ccCCEEEEccCCCCCC
Confidence               235566666666554444433  5689999999999764

Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.

>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []

Probab=99.72  E-value=9.8e-17  Score=148.41  Aligned_cols=150  Identities=21%  Similarity=0.236  Sum_probs=81.5

Q ss_pred             HHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCc-cEEEecCCCC----CCceEEEEEecCcceEEeeEEEE
Q 013328           62 RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNN----RGDGLLTAVHKDYFRVVNYRDLL  136 (445)
Q Consensus        62 R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy-~~~~~~~~~~----~~~G~ai~~~s~~~~i~~~~~~~  136 (445)
                      +...|++.|...+|||||||||+.  ......+...+....+ ..........    ...|++|++|.............
T Consensus        17 ~~~~i~~~i~~~~~Dii~LQEv~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~   94 (249)
T PF03372_consen   17 KRREIAQWIAELDPDIIALQEVRN--DDLSELLEEQLRGYLGYYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSL   94 (249)
T ss_dssp             HHHHHHHHHHHHT-SEEEEEEEES--HHHHHHHHHHHHTCTTHEEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEecchh--hhhhhhhhhhcccccccccceeccccccccccCceEEEEEcccccccccccccc
Confidence            556699999999999999999952  2334444455554333 3333322222    35699999776533222222222


Q ss_pred             ecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEee
Q 013328          137 FNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCG  216 (445)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~G  216 (445)
                      ..................    +.....+++|+|+++|+.+     ....|..+...+.+.+.......  ...|+||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~~~H~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~G  163 (249)
T PF03372_consen   95 FSKPGIRIFRRSSKSKGI----VPVSINGKPITVVNVHLPS-----SNDERQEQWRELLARIQKIYADN--PNEPVIVMG  163 (249)
T ss_dssp             ESSSTTCEEEEEEEEEEE----EEEEEETEEEEEEEEETTS-----HHHHHHHHHHHHHHHHHHHHHTS--SCCEEEEEE
T ss_pred             cccccccccccccccccc----ccccccceEEEeeeccccc-----cchhhhhhhhhhhhhhhhccccc--ccceEEEEe
Confidence            222221111111000000    0000117899999999854     23445555667778777766531  223799999


Q ss_pred             cCCCCcCc
Q 013328          217 DWNGSKRG  224 (445)
Q Consensus       217 DFN~~p~s  224 (445)
                      |||+.+.+
T Consensus       164 DfN~~~~~  171 (249)
T PF03372_consen  164 DFNSRPDS  171 (249)
T ss_dssp             E-SS-BSS
T ss_pred             ecccCCcc
Confidence            99998865

Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....

>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]

Probab=99.70  E-value=5.4e-17  Score=155.89  Aligned_cols=199  Identities=25%  Similarity=0.437  Sum_probs=136.3

Q ss_pred             CCCceEEEeeccccccccCCCCc-cccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCcc
Q 013328           26 QQPCITCTTFNILAPIYKRLSNE-NCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  104 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~-~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  104 (445)
                      +..+++|+|||+++..|.....+ +|  ......|..|+..+.+.|...+|||||||||    .++.+.+...|...||.
T Consensus        16 ~~~~~~v~s~n~l~~~~~~~~~~~~~--~~~~~~w~~r~~~~~~ei~~~~ad~icLqev----~~~~~~~~p~l~~~gY~   89 (361)
T KOG0620|consen   16 QGETFTVLSYNILSQLYATSKLYMYC--PSWALSWEYRRQLLLEEILNYNADILCLQEV----DRYHDFFSPELEASGYS   89 (361)
T ss_pred             CCceEEeechhhhhhhhcccCCCccc--chhhccHHHHHHHHHHHHhCCCcceeecchh----hHHHHHccchhhhcCCc
Confidence            33489999999999987776655 33  3456789999999999999999999999999    46777888888888999


Q ss_pred             EEEecCC------CCCCceEEEEEecCcceEEeeEEEEecCCCCc-----ee---eeeccccccc-ccccccCCCCceEE
Q 013328          105 NFKLART------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDR-----VA---QLLHVELIDP-FSQCRNGDLRQEIL  169 (445)
Q Consensus       105 ~~~~~~~------~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~-----~~---~~~~~~~~~~-~~~~~~~~~g~~v~  169 (445)
                      ..+..++      ....+||||++|.++|.++....+.++.....     ..   ....+..... +..+... .+..+.
T Consensus        90 g~~~~k~~~~~~~~~~~dGcaiffk~s~f~li~~~~i~~n~~~~~~~~~~~~~~~~~~~~d~~~~~l~~L~~~-~~~~~~  168 (361)
T KOG0620|consen   90 GIFIEKTRMGEVELEKIDGCAIFFKPSLFQLIHSSAIELNQLALSRLPPNIAQLNRLTTLDNSGNKLVSLKAE-LGNMVS  168 (361)
T ss_pred             ceeecccccchhhcccCceeeeeecchHHhhhhhhhhhhHHHHHhhcchhHHHHHhhhccccccchhhhhhhh-cCCcee
Confidence            9988764      44578999999999999987776666443210     00   0000000000 0001111 122332


Q ss_pred             ----EEEeeeeCCCCCCChhhHHHHHHHHHHHHH----HHHHH-------cCCCCCcEEEeecCCCCcCcchhHhhhhC
Q 013328          170 ----IVNTHLLFPHDSSLSLVRLHQVYKILQHVE----SYQKE-------HNLKPIPIILCGDWNGSKRGHVYKFLRSQ  233 (445)
Q Consensus       170 ----v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~----~~~~~-------~~~~~~pvIl~GDFN~~p~s~~~~~l~~~  233 (445)
                          ++|+|+.+..  .+...++.|+..+...++    +..+.       ......|+++|||||+.|.++.|..+...
T Consensus       169 ~~~~~~n~h~~~~~--~~~~vkl~qv~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~gdfNs~p~~~v~~~~~~~  245 (361)
T KOG0620|consen  169 LPHLLLNTHILWDL--PYEDVKLFQVLTLLLELAPLSPEILKIYREGNLATRIASFPLLLCGDFNSTPLSPVYALLASG  245 (361)
T ss_pred             eccccccceeccCC--CccchHHHHHHHHhhcccccchhhhhhhccccccccccccceeeeccccCCCCccceeecccC
Confidence                4789998844  456779999998877632    11111       11245789999999999999988887433

>PRK15251 cytolethal distending toxin subunit CdtB; Provisional

Probab=99.55  E-value=7.4e-14  Score=127.58  Aligned_cols=195  Identities=14%  Similarity=0.064  Sum_probs=109.7

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcC-CCcEEEEeecccChhh------HHHH------H
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYE-RSSIICLQEFWVGNEE------LVDM------Y   94 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~-~~DII~LQEv~~~~~~------~~~~------l   94 (445)
                      ..++|.|||+++....           ...+|..   .+.+.|... ++||+++||+......      ....      .
T Consensus        23 ~~~~~~twn~qg~s~~-----------~~~kw~~---~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v   88 (271)
T PRK15251         23 EDYKVATWNLQGSSAS-----------TESKWNV---NVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPI   88 (271)
T ss_pred             ccceEEEeecCCCCCC-----------Chhhhhh---hHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCc
Confidence            4699999999965321           2234542   344555554 6999999999421100      0000      0


Q ss_pred             HH---Hhh---ccCccEEEecCCC--CCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCc
Q 013328           95 EK---RLS---DAGYVNFKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQ  166 (445)
Q Consensus        95 ~~---~l~---~~gy~~~~~~~~~--~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  166 (445)
                      .+   .++   .-++.++|..+.+  ....|+||+  || ++..+...+..+....+...           ..++  +  
T Consensus        89 ~ey~w~l~~~srpgm~YiY~~aiD~~ggr~glAIl--Sr-~~a~~~~~l~~p~~~~Rpil-----------gi~i--~--  150 (271)
T PRK15251         89 DEYTWNLGTRSRPNQVYIYYSRVDVGANRVNLAIV--SR-RRADEVIVLRPPTVASRPII-----------GIRI--G--  150 (271)
T ss_pred             ccEEEEccCccCCCceEEEEecccCCCCceeEEEE--ec-ccccceEEecCCCCcccceE-----------EEEe--c--
Confidence            00   011   1234444443322  345699999  88 77776666654422222111           1222  2  


Q ss_pred             eEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHH-HHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccC
Q 013328          167 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVE-SYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY  245 (445)
Q Consensus       167 ~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~-~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~  245 (445)
                      .+.++++|+.+..    ...|.++++.+.+... ..      ...|++||||||..|++..+....+. +.......   
T Consensus       151 ~~~ffstH~~a~~----~~da~aiV~~I~~~f~~~~------~~~pw~I~GDFNr~P~sl~~~l~~~~-~~~~~~iv---  216 (271)
T PRK15251        151 NDVFFSIHALANG----GTDAGAIVRAVHNFFRPNM------RHINWMIAGDFNRSPDRLESTLDTEH-LRNRVNIV---  216 (271)
T ss_pred             CeEEEEeeecCCC----CccHHHHHHHHHHHHhhcc------CCCCEEEeccCCCCCcchhhhhcchh-cccccEEe---
Confidence            3799999997642    2347788888777765 21      34799999999999999866665321 22111111   


Q ss_pred             CCCCCCcceeccCCCCcccccceeeecCCcc
Q 013328          246 TDADAHKWVSHRNHRGNICGVDFIWLLNPNK  276 (445)
Q Consensus       246 ~~~~~~t~~~~~~~~~~~~rIDyi~~~~~~~  276 (445)
                       .+..+|++       ...+|||++..+...
T Consensus       217 -~p~~pT~~-------s~~~IDYiv~~~s~~  239 (271)
T PRK15251        217 -APTEPTQR-------SGGTLDYAVTGNSNQ  239 (271)
T ss_pred             -CCCCCCCC-------CCCeeEEEEecCccc
Confidence             12233432       245799999975543

>COG2374 Predicted extracellular nuclease [General function prediction only]

Probab=99.48  E-value=5.1e-13  Score=134.46  Aligned_cols=255  Identities=13%  Similarity=0.138  Sum_probs=161.2

Q ss_pred             CCCCCceEEEeeccccccc-cCCCCc------cccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccC----h-----
Q 013328           24 HQQQPCITCTTFNILAPIY-KRLSNE------NCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVG----N-----   87 (445)
Q Consensus        24 ~~~~~~lrvlT~NV~~~~~-~~~~~~------~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~----~-----   87 (445)
                      ....+.|||.+|||++.+- ......      .|+.+....+....+.+++..|...+|||++|-|+...    .     
T Consensus       458 ~~v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai  537 (798)
T COG2374         458 PDVGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAI  537 (798)
T ss_pred             cccCceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHHH
Confidence            4456789999999998753 111111      23445556677788899999999999999999999532    1     


Q ss_pred             hhHHHHHHHHhhcc-CccEEEecCCCC---CCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccccc-ccccccC
Q 013328           88 EELVDMYEKRLSDA-GYVNFKLARTNN---RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDP-FSQCRNG  162 (445)
Q Consensus        88 ~~~~~~l~~~l~~~-gy~~~~~~~~~~---~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  162 (445)
                      .++...|.+.++.- .|.++...+...   ..-+++++|+..+..+.....+.-.+.-..+.....-....+ ...++..
T Consensus       538 ~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF~~~  617 (798)
T COG2374         538 AQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTFQDL  617 (798)
T ss_pred             HHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccceEEecccccccccccccccccccccccCcchhhhhhhc
Confidence            12333344444443 465555443312   223789999988766665544421111000000000000001 1124455


Q ss_pred             CCCceEEEEEeeeeCCCC------------CCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhh
Q 013328          163 DLRQEILIVNTHLLFPHD------------SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL  230 (445)
Q Consensus       163 ~~g~~v~v~n~HL~~~~~------------~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l  230 (445)
                      ..+.+|+|+.-||.+...            ..+...|.+|++.|..+++.....  ..+.|++|.||||+...+.+++.|
T Consensus       618 ~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~--~~d~~~viLGD~N~y~~edpI~~l  695 (798)
T COG2374         618 SGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTG--KADADIVILGDFNDYAFEDPIQAL  695 (798)
T ss_pred             cCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCccc--ccCCCEEEEeccchhhhccHHHHH
Confidence            577789999999987322            134678999999999999864322  257789999999999999999999


Q ss_pred             hhCCCcccccccccCCCCCCCcceeccCCCCcccccceeeecCCcccccccccchh
Q 013328          231 RSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWS  286 (445)
Q Consensus       231 ~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~~~~~rIDyi~~~~~~~~~~~~~~s~~  286 (445)
                      +..|+...-...+.  ..+.++|...+    +...+||+|.+....++......|+
T Consensus       696 ~~aGy~~l~~~~~~--~~~~YSY~f~G----~~gtLDhaLas~sl~~~v~~a~ewH  745 (798)
T COG2374         696 EGAGYMNLAARFHD--AGDRYSYVFNG----QSGTLDHALASASLAAQVSGATEWH  745 (798)
T ss_pred             hhcCchhhhhhccC--CCCceEEEECC----ccchHhhhhhhhhhhhhccCceeee
Confidence            99897743333322  23345554433    4567999999877777766666676

>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.41  E-value=1e-12  Score=121.10  Aligned_cols=196  Identities=13%  Similarity=0.022  Sum_probs=115.7

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccE
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  105 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  105 (445)
                      .+..++++++|++..+   ..                ..+++..|...++|+|.+||...   .........-..++|..
T Consensus        85 ~~~~~~~l~~N~r~~n---~~----------------~~k~Lsl~~~~~~D~v~~~E~~~---~~~~~~~~l~~~yP~~~  142 (309)
T COG3021          85 DQRLLWNLQKNVRFDN---AS----------------VAKLLSLIQQLDADAVTTPEGVQ---LWTAKVGALAAQYPAFI  142 (309)
T ss_pred             cchhhhhhhhhccccC---cC----------------HHHHHHHHhhhCcchhhhHHHHH---HhHhHHHHHHHhCCcee
Confidence            3567999999988553   11                26788888888899999999831   22222222222244433


Q ss_pred             EEecCCCCCCceEEEEEecCcceEEeeEE-EEecCCCCceeeeecccccccccccccCCCCceEEEEEeeee-CCCCCCC
Q 013328          106 FKLARTNNRGDGLLTAVHKDYFRVVNYRD-LLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL-FPHDSSL  183 (445)
Q Consensus       106 ~~~~~~~~~~~G~ai~~~s~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~-~~~~~~~  183 (445)
                      ..  ..+....+.+++  |++.++...+. .++....+....            .....+|+.+.|++.|.. ++-.  .
T Consensus       143 ~~--~~~~~~~~~a~~--sr~~~~~~~~~e~~~~~pk~~~~t------------~~~~~~g~~l~v~~lh~~~~~~~--~  204 (309)
T COG3021         143 LC--QHPTGVFTLAIL--SRRPCCPLTEAEPWLRLPKSALAT------------AYPLPDGTELTVVALHAVNFPVG--T  204 (309)
T ss_pred             ec--CCCCCeeeeeec--cccccccccccCccccCCccceeE------------EEEcCCCCEEEEEeeccccccCC--c
Confidence            32  233355688888  65332221111 111111111111            223347899999999996 4332  1


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCCCCcc
Q 013328          184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNI  263 (445)
Q Consensus       184 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~~~~  263 (445)
                      ...| +|...+.+.+..       -..|+|++||||++|+|..++.+...|..+.+..++. .  ...+|+.... .-..
T Consensus       205 ~~~~-~ql~~l~~~i~~-------~~gpvIlaGDfNa~pWS~~~~R~~~l~~~~~~~~aG~-~--~~~~~p~~~~-r~~g  272 (309)
T COG3021         205 DPQR-AQLLELGDQIAG-------HSGPVILAGDFNAPPWSRTAKRMAALGGLRAAPRAGL-W--EVRFTPDERR-RAFG  272 (309)
T ss_pred             cHHH-HHHHHHHHHHHc-------CCCCeEEeecCCCcchhHHHHHHHHhcccccchhccC-C--ccccCHHHHh-hccC
Confidence            2234 677767666665       4579999999999999999999987766766555541 1  1233333221 1123


Q ss_pred             cccceeeecC
Q 013328          264 CGVDFIWLLN  273 (445)
Q Consensus       264 ~rIDyi~~~~  273 (445)
                      ..|||||+++
T Consensus       273 ~PIDhvf~rg  282 (309)
T COG3021         273 LPIDHVFYRG  282 (309)
T ss_pred             CCcceeeecC
Confidence            4699999987

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.32  E-value=2.2e-12  Score=98.80  Aligned_cols=69  Identities=26%  Similarity=0.305  Sum_probs=62.1

Q ss_pred             hhccchHHHhcccccc-CCCCCcccHHHHHHHHHH-hccCCCCCCCCH-HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKA-DNDGDYITYSGFCEALEQ-LNLTGHKHGLAD-EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~-~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ......+.++|+.||+ +++ |+|+.+||+.+|.. +|     ..+++ +++++||+.+|.|+||.|+|+||+.+|..
T Consensus         4 E~ai~~l~~~F~~fd~~~~~-g~i~~~ELk~ll~~elg-----~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~   75 (89)
T cd05022           4 EKAIETLVSNFHKASVKGGK-ESLTASEFQELLTQQLP-----HLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE   75 (89)
T ss_pred             HHHHHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHHhh-----hhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3456789999999999 999 99999999999999 88     66787 89999999999999999999999976643

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.30  E-value=9e-12  Score=104.88  Aligned_cols=80  Identities=29%  Similarity=0.483  Sum_probs=71.8

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..|+.++....  ....++++++|+.||+|++ |+|+..||+.+|+.+|     ..++++++++|++.+|.|+||.|+|+
T Consensus        75 ~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~d-G~Is~~eL~~vl~~lg-----e~~~deev~~ll~~~d~d~dG~i~~~  148 (160)
T COG5126          75 PEFLTVMSVKLKRGDKEEELREAFKLFDKDHD-GYISIGELRRVLKSLG-----ERLSDEEVEKLLKEYDEDGDGEIDYE  148 (160)
T ss_pred             HHHHHHHHHHhccCCcHHHHHHHHHHhCCCCC-ceecHHHHHHHHHhhc-----ccCCHHHHHHHHHhcCCCCCceEeHH
Confidence            56777776666  3556899999999999999 9999999999999999     89999999999999999999999999


Q ss_pred             HHHHHHhc
Q 013328          365 EFQQRIWK  372 (445)
Q Consensus       365 eF~~~~~~  372 (445)
                      ||++.+..
T Consensus       149 eF~~~~~~  156 (160)
T COG5126         149 EFKKLIKD  156 (160)
T ss_pred             HHHHHHhc
Confidence            99976654

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.23  E-value=2e-11  Score=93.71  Aligned_cols=68  Identities=22%  Similarity=0.313  Sum_probs=61.1

Q ss_pred             hhccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......+.++|+.|| +||+ | .|+.+||+.+|+.     +|     ...++++++.+++.+|.|+||.|+|+||+..+
T Consensus         4 e~~~~~l~~aF~~fD~~dgd-G~~I~~~eL~~ll~~~~~~~lg-----~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li   77 (88)
T cd05027           4 EKAMVALIDVFHQYSGREGD-KHKLKKSELKELINNELSHFLE-----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   77 (88)
T ss_pred             HHHHHHHHHHHHHhcccCCC-cCEECHHHHHHHHHHHhHHHhc-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345678999999998 7999 9 5999999999999     88     77889999999999999999999999999655


Q ss_pred             h
Q 013328          371 W  371 (445)
Q Consensus       371 ~  371 (445)
                      .
T Consensus        78 ~   78 (88)
T cd05027          78 A   78 (88)
T ss_pred             H
Confidence            3

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.22  E-value=2.9e-11  Score=88.09  Aligned_cols=61  Identities=28%  Similarity=0.534  Sum_probs=53.2

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHH----HHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADE----ETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~----~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ++++|+.+|+|++ |+|+.+||+.++..++     ...+++    .++.+++.+|.|+||.|+|+||++++
T Consensus         2 l~~~F~~~D~d~~-G~i~~~el~~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGD-GYISKEELRRALKHLG-----RDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSS-SEEEHHHHHHHHHHTT-----SHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCcc-CCCCHHHHHHHHHHhc-----ccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            6889999999999 9999999999999998     545454    45566999999999999999999654

...

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.17  E-value=1.8e-11  Score=103.08  Aligned_cols=121  Identities=18%  Similarity=0.215  Sum_probs=100.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      .++..+++++|..+|+|++ |.|+..||..+|+.+|     .+++++++.+|+..+|. ++|.|+|.+|+..|-..    
T Consensus        16 ~~qi~~lkeaF~l~D~d~~-G~I~~~el~~ilr~lg-----~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~   88 (160)
T COG5126          16 EEQIQELKEAFQLFDRDSD-GLIDRNELGKILRSLG-----FNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG   88 (160)
T ss_pred             HHHHHHHHHHHHHhCcCCC-CCCcHHHHHHHHHHcC-----CCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC
Confidence            6788999999999999999 9999999999999999     88999999999999999 99999999999766332    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             .+++-.|.+..|.|..++...-...+|-+.+.+.     |.+  -...|+.+.||.++-
T Consensus        89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~dee-----v~~--ll~~~d~d~dG~i~~  147 (160)
T COG5126          89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEE-----VEK--LLKEYDEDGDGEIDY  147 (160)
T ss_pred             CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHH-----HHH--HHHhcCCCCCceEeH
Confidence                   2345668888899988887776777776655443     333  445788899998874

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.15  E-value=1.3e-10  Score=99.64  Aligned_cols=79  Identities=29%  Similarity=0.493  Sum_probs=67.9

Q ss_pred             HHHHHHHHHhhh--h----ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCce
Q 013328          287 EAVFGMFKCLLR--R----ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV  360 (445)
Q Consensus       287 ~~v~~~~~~~~~--~----~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~  360 (445)
                      ..|+.++.....  .    ...+++++|+.||+|++ |+|+.+||+.+|..+|     ...+.++++.+++.+|.|+||.
T Consensus        64 ~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~-G~Is~~el~~~l~~lg-----~~~~~~e~~~mi~~~d~d~dg~  137 (151)
T KOG0027|consen   64 EEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGD-GFISASELKKVLTSLG-----EKLTDEECKEMIREVDVDGDGK  137 (151)
T ss_pred             HHHHHHHHhhhcccccccccHHHHHHHHHHHccCCC-CcCcHHHHHHHHHHhC-----CcCCHHHHHHHHHhcCCCCCCe
Confidence            455555554441  1    24599999999999999 9999999999999999     8899999999999999999999


Q ss_pred             eeHHHHHHHHh
Q 013328          361 VDYKEFQQRIW  371 (445)
Q Consensus       361 i~~~eF~~~~~  371 (445)
                      |+|+||++.|.
T Consensus       138 i~f~ef~~~m~  148 (151)
T KOG0027|consen  138 VNFEEFVKMMS  148 (151)
T ss_pred             EeHHHHHHHHh
Confidence            99999997664

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.14  E-value=4.1e-11  Score=102.72  Aligned_cols=120  Identities=19%  Similarity=0.277  Sum_probs=94.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT----  374 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~----  374 (445)
                      ....+++++|+.||+|++ |+|+..||..+|+.+|     ..+++.++..++.++|.|++|.|+|+||+..+....    
T Consensus         5 ~~~~el~~~F~~fD~d~~-G~i~~~el~~~lr~lg-----~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~   78 (151)
T KOG0027|consen    5 EQILELKEAFQLFDKDGD-GKISVEELGAVLRSLG-----QNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT   78 (151)
T ss_pred             HHHHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc
Confidence            345679999999999999 9999999999999999     889999999999999999999999999997664322    


Q ss_pred             -----------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          375 -----------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       375 -----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                                 .+.-.|.+..|.+...|...-...+|...+     ..++..  .....|.+.||.++
T Consensus        79 ~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~-----~~e~~~--mi~~~d~d~dg~i~  139 (151)
T KOG0027|consen   79 DEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLT-----DEECKE--MIREVDVDGDGKVN  139 (151)
T ss_pred             cccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCC-----HHHHHH--HHHhcCCCCCCeEe
Confidence                       123456777777887777777777776555     223333  44566777888773

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=99.11  E-value=1.6e-10  Score=90.02  Aligned_cols=71  Identities=15%  Similarity=0.123  Sum_probs=58.0

Q ss_pred             hhccchHHHhccccc-cCCCCC-cccHHHHHHHHHHh-ccCCC-CCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQL-NLTGH-KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~~-g~~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......+.++|+.|| +|++ | +|+..||+.+|... +  +. ....++.+++++++++|.|+||.|+|+||+..+.
T Consensus         6 e~a~~~~~~~F~~~dd~dgd-g~~Is~~EL~~ll~~~~~--~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~   80 (93)
T cd05026           6 EGAMDTLIRIFHNYSGKEGD-RYKLSKGELKELLQRELT--DFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVA   80 (93)
T ss_pred             HHHHHHHHHHHHHHHccCCC-CCEECHHHHHHHHHHHhH--HhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            456678899999998 7899 8 59999999999773 2  00 0334778999999999999999999999997653

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=99.09  E-value=1.8e-10  Score=88.41  Aligned_cols=68  Identities=15%  Similarity=0.201  Sum_probs=60.0

Q ss_pred             hhccchHHHhcccccc-CC-CCCcccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKA-DN-DGDYITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~-~~-~~G~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .+....+.++|+.||. || + |+|+.+||+.+|..   +|     ..+++++++++|+.+|.|++|.|+|+||+..+.
T Consensus         6 e~~~~~~i~~F~~y~~~~~~~-g~Is~~EL~~~l~~~~~lg-----~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~   78 (88)
T cd05029           6 DQAIGLLVAIFHKYSGREGDK-NTLSKKELKELIQKELTIG-----SKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG   78 (88)
T ss_pred             HHHHHHHHHHHHHHHccCCCC-CEECHHHHHHHHHHHHhcC-----CCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence            4556778899999998 77 6 99999999999974   67     779999999999999999999999999997663

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=99.03  E-value=5.5e-10  Score=87.07  Aligned_cols=72  Identities=18%  Similarity=0.233  Sum_probs=59.1

Q ss_pred             hhccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......++++|+.|| .+++ | +|+..||+.+|+. +|.. -...+++++++.+|+.+|.|++|.|+|+||+..+.
T Consensus         5 e~~~~~l~~~F~~fDd~dg~-G~~Is~~El~~~l~~~lg~~-~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~   79 (92)
T cd05025           5 ETAMETLINVFHAHSGKEGD-KYKLSKKELKDLLQTELSDF-LDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVA   79 (92)
T ss_pred             HHHHHHHHHHHHHHhcccCC-CCeECHHHHHHHHHHHHHHH-ccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            345578999999997 9999 9 5999999999986 5510 00346889999999999999999999999996553

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.01  E-value=2.1e-10  Score=99.61  Aligned_cols=102  Identities=16%  Similarity=0.169  Sum_probs=91.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----cCc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----TTW  375 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----~~~  375 (445)
                      ...+...|...|+|+. |+|+.+||+.+|...+    +.+++.+.++.|+..+|.+.+|+|+|+||. .||.     +.+
T Consensus        56 ~~~~~~~f~~vD~d~s-g~i~~~eLq~aLsn~~----~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~-~Lw~~i~~Wr~v  129 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRS-GRILAKELQQALSNGT----WSPFSIETCRLMISMFDRDNSGTIGFKEFK-ALWKYINQWRNV  129 (221)
T ss_pred             cHHHHHHHHhhCcccc-ccccHHHHHHHhhcCC----CCCCCHHHHHHHHHHhcCCCCCccCHHHHH-HHHHHHHHHHHH
Confidence            4567889999999999 9999999999998764    267899999999999999999999999998 6766     567


Q ss_pred             cccccccCCcccccccccccccccCeeeecccc
Q 013328          376 SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVL  408 (445)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  408 (445)
                      +...|++.+|.++..|...++..+||++++..+
T Consensus       130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~  162 (221)
T KOG0037|consen  130 FRTYDRDRSGTIDSSELRQALTQLGYRLSPQFY  162 (221)
T ss_pred             HHhcccCCCCcccHHHHHHHHHHcCcCCCHHHH
Confidence            899999999999999999999999999887763

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=99.00  E-value=7.4e-10  Score=86.67  Aligned_cols=68  Identities=15%  Similarity=0.201  Sum_probs=59.2

Q ss_pred             hccchHHHhcccccc-CC-CCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKA-DN-DGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~-~~-~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||. |+ + |+|+.+||+.+|+.     +|     ..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus         5 ~~~~~l~~~F~~~D~~dg~d-G~Is~~El~~~l~~~~g~~lg-----~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~   78 (94)
T cd05031           5 HAMESLILTFHRYAGKDGDK-NTLSRKELKKLMEKELSEFLK-----NQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA   78 (94)
T ss_pred             HHHHHHHHHHHHHhccCCCC-CeECHHHHHHHHHHHhHHHhh-----ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            345678999999997 97 8 99999999999986     45     568899999999999999999999999997664


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus        79 ~   79 (94)
T cd05031          79 G   79 (94)
T ss_pred             H
Confidence            3

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>smart00027 EH Eps15 homology domain

Probab=98.98  E-value=1.1e-09  Score=86.18  Aligned_cols=65  Identities=23%  Similarity=0.301  Sum_probs=59.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.++|+.+|.|++ |.|+.+||+.+|+.+|       ++++++++++..+|.+++|.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~d~~-G~Is~~el~~~l~~~~-------~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~   71 (96)
T smart00027        7 EDKAKYEQIFRSLDKNQD-GTVTGAQAKPILLKSG-------LPQTLLAKIWNLADIDNDGELDKDEFALAMH   71 (96)
T ss_pred             HHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            455678999999999999 9999999999999977       6789999999999999999999999996553

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.97  E-value=1.2e-09  Score=79.65  Aligned_cols=59  Identities=25%  Similarity=0.350  Sum_probs=54.3

Q ss_pred             HHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          305 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       305 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +++|+.+|+|++ |.|+.+||+.+|..+|       .++++++.++..+|.+++|.|+|+||+..+.
T Consensus         2 ~~~F~~~D~~~~-G~i~~~el~~~l~~~g-------~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~   60 (67)
T cd00052           2 DQIFRSLDPDGD-GLISGDEARPFLGKSG-------LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH   60 (67)
T ss_pred             hHHHHHhCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            578999999999 9999999999999988       5788999999999999999999999996553

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.97  E-value=2.4e-09  Score=88.17  Aligned_cols=79  Identities=25%  Similarity=0.350  Sum_probs=70.2

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      +.+..++...+  +....++..+|+.+|.|++ |+|+..+|+.+.+.||     .+++++|++.|+.++|.|+||.|+-+
T Consensus        89 e~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~-Gkis~~~lkrvakeLg-----enltD~El~eMIeEAd~d~dgevnee  162 (172)
T KOG0028|consen   89 EDFRRVMTVKLGERDTKEEIKKAFRLFDDDKT-GKISQRNLKRVAKELG-----ENLTDEELMEMIEEADRDGDGEVNEE  162 (172)
T ss_pred             HHHHHHHHHHHhccCcHHHHHHHHHcccccCC-CCcCHHHHHHHHHHhC-----ccccHHHHHHHHHHhcccccccccHH
Confidence            55556655555  5677899999999999999 9999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHh
Q 013328          365 EFQQRIW  371 (445)
Q Consensus       365 eF~~~~~  371 (445)
                      ||.+.|-
T Consensus       163 EF~~imk  169 (172)
T KOG0028|consen  163 EFIRIMK  169 (172)
T ss_pred             HHHHHHh
Confidence            9996553

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.93  E-value=2.4e-09  Score=82.28  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=58.4

Q ss_pred             hhccchHHHhccc-cccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAF-LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~-~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ......+..+|+. +|+++++|+|+.+||+.+|....-.-......+.+++++++.+|.|+||.|+|+||+..|..
T Consensus         5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~   80 (89)
T cd05023           5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG   80 (89)
T ss_pred             HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            3556778999999 78889823999999999998752000003456789999999999999999999999976643

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.90  E-value=6.6e-10  Score=91.43  Aligned_cols=120  Identities=14%  Similarity=0.169  Sum_probs=84.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT----  374 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~----  374 (445)
                      .+..+++.+|..||.+++ |+|+++||+.+++.+|     ..+..+|+.+|+.++|+++.|.|+|++|++.|....    
T Consensus        30 ~q~q~i~e~f~lfd~~~~-g~iD~~EL~vAmralG-----FE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d  103 (172)
T KOG0028|consen   30 EQKQEIKEAFELFDPDMA-GKIDVEELKVAMRALG-----FEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD  103 (172)
T ss_pred             HHHhhHHHHHHhhccCCC-CcccHHHHHHHHHHcC-----CCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence            455789999999999999 9999999999999999     778999999999999999999999999997764422    


Q ss_pred             -------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          375 -------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       375 -------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                             ++...|.+..|.+...+...-..++|=+++.+-+     ..  .+++.|.+.+|.++
T Consensus       104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El-----~e--MIeEAd~d~dgevn  160 (172)
T KOG0028|consen  104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEEL-----ME--MIEEADRDGDGEVN  160 (172)
T ss_pred             cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHH-----HH--HHHHhccccccccc
Confidence                   2233344444444444433333344444443332     22  34556666666543

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.89  E-value=5.4e-09  Score=72.65  Aligned_cols=49  Identities=33%  Similarity=0.518  Sum_probs=46.1

Q ss_pred             CcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          318 DYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       318 G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      |.|+.+||+.+|..+|     .. +++++++.++..+|.|++|.|+|+||+..+.
T Consensus         3 G~i~~~~~~~~l~~~g-----~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    3 GKITREEFRRALSKLG-----IKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SEEEHHHHHHHHHHTT-----SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhC-----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            9999999999998889     77 9999999999999999999999999997654

...

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.88  E-value=3.6e-09  Score=81.79  Aligned_cols=71  Identities=25%  Similarity=0.288  Sum_probs=58.4

Q ss_pred             hccchHHHhcccccc--CCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~--~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +....++++|+.||+  |++ |.|+.+||+.+++. +|.. ....++.++++.++..+|.+++|.|+|+||+..+.
T Consensus         5 ~~~~~l~~~F~~~D~~~~~~-G~Is~~el~~~l~~~~g~~-~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~   78 (88)
T cd00213           5 KAIETIIDVFHKYSGKEGDK-DTLSKKELKELLETELPNF-LKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIG   78 (88)
T ss_pred             HHHHHHHHHHHHHhhccCCC-CcCcHHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            456778999999999  899 99999999999986 5510 00224589999999999999999999999996553

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>PTZ00183 centrin; Provisional

Probab=98.82  E-value=2.6e-09  Score=92.25  Aligned_cols=121  Identities=17%  Similarity=0.205  Sum_probs=89.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....+..+|..+|.+++ |.|+..||..+|+.+|     ..++.+++..++..+|.+++|.|+|+||+..+..      
T Consensus        14 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   87 (158)
T PTZ00183         14 DQKKEIREAFDLFDTDGS-GTIDPKELKVAMRSLG-----FEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD   87 (158)
T ss_pred             HHHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC
Confidence            344678899999999999 9999999999999998     6688889999999999999999999999876532      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                           ...+...+.+..|.++..+........|..++     ..++..  +...++.+++|.|+.
T Consensus        88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~-----~~~~~~--~~~~~d~~~~g~i~~  145 (158)
T PTZ00183         88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETIT-----DEELQE--MIDEADRNGDGEISE  145 (158)
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-----HHHHHH--HHHHhCCCCCCcCcH
Confidence                 12234556666666666555444444453322     223333  456788888998764

>PTZ00184 calmodulin; Provisional

Probab=98.79  E-value=3e-09  Score=90.76  Aligned_cols=121  Identities=16%  Similarity=0.230  Sum_probs=89.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      .....+.+.|..+|.+++ |.|+.+||..++..+|     ..++.+++..++..+|.+++|.|+|+||+..+...     
T Consensus         8 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          8 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            445678899999999999 9999999999999998     66788899999999999999999999999766421     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                            ..+...|.+..|.+...+.......+|+.++.+.     +..  ....+|.+.+|+|+.
T Consensus        82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~-----~~~--~~~~~d~~~~g~i~~  139 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEE-----VDE--MIREADVDGDGQINY  139 (149)
T ss_pred             HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHH-----HHH--HHHhcCCCCCCcCcH
Confidence                  2234445566666666665444444554433322     111  345678888888764

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.75  E-value=3.5e-08  Score=80.76  Aligned_cols=95  Identities=23%  Similarity=0.273  Sum_probs=80.7

Q ss_pred             cccceeeecCCcccccccccchhHHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCC
Q 013328          264 CGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL  341 (445)
Q Consensus       264 ~rIDyi~~~~~~~~~~~~~~s~~~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~  341 (445)
                      .-||.++-..+.       +-.-..|+.++...+  ......|..+|+.||.+++ |+|..+.|+++|...|     ..+
T Consensus        68 ~elDaM~~Ea~g-------PINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~-G~I~~d~lre~Ltt~g-----Dr~  134 (171)
T KOG0031|consen   68 EELDAMMKEAPG-------PINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGS-GKIDEDYLRELLTTMG-----DRF  134 (171)
T ss_pred             HHHHHHHHhCCC-------CeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCC-CccCHHHHHHHHHHhc-----ccC
Confidence            348888853222       123467888888888  5667899999999999999 9999999999999999     999


Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +++||+.|++.+-.|..|.|+|.+|+..|.
T Consensus       135 ~~eEV~~m~r~~p~d~~G~~dy~~~~~~it  164 (171)
T KOG0031|consen  135 TDEEVDEMYREAPIDKKGNFDYKAFTYIIT  164 (171)
T ss_pred             CHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence            999999999999999999999999996654

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=98.74  E-value=1.1e-08  Score=87.28  Aligned_cols=80  Identities=20%  Similarity=0.319  Sum_probs=68.6

Q ss_pred             HHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          289 VFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       289 v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      ++.-+..+-+.++..+..+|+.+|.+.| |+|+..||+.+|.+||     .+.+.=-++.||++.|.|.||+|+|-||+ 
T Consensus        86 ~yteF~eFsrkqIk~~~~~Fk~yDe~rD-gfIdl~ELK~mmEKLg-----apQTHL~lK~mikeVded~dgklSfrefl-  158 (244)
T KOG0041|consen   86 VYTEFSEFSRKQIKDAESMFKQYDEDRD-GFIDLMELKRMMEKLG-----APQTHLGLKNMIKEVDEDFDGKLSFREFL-  158 (244)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhccccc-ccccHHHHHHHHHHhC-----CchhhHHHHHHHHHhhcccccchhHHHHH-
Confidence            3444444447788899999999999999 9999999999999999     67777789999999999999999999998 


Q ss_pred             HHhccCc
Q 013328          369 RIWKTTW  375 (445)
Q Consensus       369 ~~~~~~~  375 (445)
                      .|+.+..
T Consensus       159 LIfrkaa  165 (244)
T KOG0041|consen  159 LIFRKAA  165 (244)
T ss_pred             HHHHHHh
Confidence            6766444

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.72  E-value=4.9e-08  Score=69.33  Aligned_cols=60  Identities=32%  Similarity=0.578  Sum_probs=56.0

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      +..+|..+|.+++ |.|+.+|+..++..++     ...+.+++..++..+|.+++|.|+|+||+..
T Consensus         2 ~~~~f~~~d~~~~-g~l~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~   61 (63)
T cd00051           2 LREAFRLFDKDGD-GTISADELKAALKSLG-----EGLSEEEIDEMIREVDKDGDGKIDFEEFLEL   61 (63)
T ss_pred             HHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            5678999999999 9999999999999998     7789999999999999999999999999854

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.68  E-value=5.7e-08  Score=78.17  Aligned_cols=79  Identities=19%  Similarity=0.358  Sum_probs=65.9

Q ss_pred             HHHHHHHHHhhhh----ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceee
Q 013328          287 EAVFGMFKCLLRR----ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD  362 (445)
Q Consensus       287 ~~v~~~~~~~~~~----~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  362 (445)
                      +.|+.++..+.+.    ..+.+.+-++.||++++ |+|...||+.+|..+|     ..++++|++.++.-. .|.+|.|+
T Consensus        69 E~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~-G~i~~aeLRhvLttlG-----ekl~eeEVe~Llag~-eD~nG~i~  141 (152)
T KOG0030|consen   69 EEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGN-GTIMGAELRHVLTTLG-----EKLTEEEVEELLAGQ-EDSNGCIN  141 (152)
T ss_pred             HHHHHHHHHHHhccccCcHHHHHHHHHhhcccCC-cceeHHHHHHHHHHHH-----hhccHHHHHHHHccc-cccCCcCc
Confidence            5666766666522    22567778899999999 9999999999999999     999999999999764 67789999


Q ss_pred             HHHHHHHHhc
Q 013328          363 YKEFQQRIWK  372 (445)
Q Consensus       363 ~~eF~~~~~~  372 (445)
                      |+.|++.++.
T Consensus       142 YE~fVk~i~~  151 (152)
T KOG0030|consen  142 YEAFVKHIMS  151 (152)
T ss_pred             HHHHHHHHhc
Confidence            9999987753

>PF14658 EF-hand_9: EF-hand domain

Probab=98.68  E-value=7.1e-08  Score=68.15  Aligned_cols=59  Identities=20%  Similarity=0.341  Sum_probs=55.1

Q ss_pred             hccccccCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHhcCCCC-ceeeHHHHHHHHh
Q 013328          307 AFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGN-GVVDYKEFQQRIW  371 (445)
Q Consensus       307 ~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~d~~~~-g~i~~~eF~~~~~  371 (445)
                      +|..||.++. |.|...+|+..|+.++     . .+++.+++.+..++|.++. |.|+|+.|+..|.
T Consensus         3 ~F~~fD~~~t-G~V~v~~l~~~Lra~~-----~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~   63 (66)
T PF14658_consen    3 AFDAFDTQKT-GRVPVSDLITYLRAVT-----GRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR   63 (66)
T ss_pred             chhhcCCcCC-ceEeHHHHHHHHHHHc-----CCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence            7999999999 9999999999999998     5 7899999999999999988 9999999997663

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.67  E-value=4.1e-08  Score=79.13  Aligned_cols=63  Identities=14%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|..+|.|+| |.|+.+||+.++  ++       ..+..++.++..+|.|+||.|+++||...++
T Consensus        45 ~~~~~l~w~F~~lD~d~D-G~Ls~~EL~~~~--l~-------~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~  107 (116)
T cd00252          45 MCKDPVGWMFNQLDGNYD-GKLSHHELAPIR--LD-------PNEHCIKPFFESCDLDKDGSISLDEWCYCFI  107 (116)
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHH--cc-------chHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence            445678899999999999 999999999876  44       5577899999999999999999999997663

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.67  E-value=1.1e-08  Score=96.60  Aligned_cols=104  Identities=19%  Similarity=0.204  Sum_probs=90.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----c
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----T  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----~  373 (445)
                      +....++.+|+.||.+++ |.|+..+|.+++..+.+    .+...+-...++..+|.|.||.+||+||.+++..     .
T Consensus        11 er~~r~~~lf~~lD~~~~-g~~d~~~l~k~~~~l~~----~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~   85 (463)
T KOG0036|consen   11 ERDIRIRCLFKELDSKND-GQVDLDQLEKGLEKLDH----PKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELY   85 (463)
T ss_pred             HHHHHHHHHHHHhccCCC-CceeHHHHHHHHHhcCC----CCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHH
Confidence            455678999999999999 99999999999999982    2366677899999999999999999999998855     3


Q ss_pred             CccccccccCCcccccccccccccccCeeeeccc
Q 013328          374 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  407 (445)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  407 (445)
                      .+|...|.+.+|.++-.|...++.++|.+++...
T Consensus        86 ~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~  119 (463)
T KOG0036|consen   86 RIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEK  119 (463)
T ss_pred             HHHhhhccccCCccCHHHHHHHHHHhCCccCHHH
Confidence            4568889999999999999999999998877655

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.67  E-value=3.7e-08  Score=75.81  Aligned_cols=69  Identities=19%  Similarity=0.289  Sum_probs=57.5

Q ss_pred             hhccchHHHhccccccC--CCCCcccHHHHHHHHH-HhccCCCCCCCC----HHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALE-QLNLTGHKHGLA----DEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~--~~~G~i~~~el~~~l~-~~g~~~~~~~~~----~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .+....+...|+.++..  .+ |+|+.+||+.+|. .+|     ..++    +++++.+|+.+|.|++|.|+|+||+..+
T Consensus         4 e~~i~~~~~~f~~y~~~~~~~-~~Is~~El~~ll~~~~g-----~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~   77 (88)
T cd05030           4 EKAIETIINVFHQYSVRKGHP-DTLYKKEFKQLVEKELP-----NFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLV   77 (88)
T ss_pred             HHHHHHHHHHHHHHhccCCCc-ccCCHHHHHHHHHHHhh-----HhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            34566788899999865  36 9999999999997 555     4465    8999999999999999999999999766


Q ss_pred             hc
Q 013328          371 WK  372 (445)
Q Consensus       371 ~~  372 (445)
                      ..
T Consensus        78 ~~   79 (88)
T cd05030          78 IK   79 (88)
T ss_pred             HH
Confidence            43

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.64  E-value=1e-07  Score=83.33  Aligned_cols=82  Identities=22%  Similarity=0.351  Sum_probs=63.8

Q ss_pred             HHHHHHHHHhh-h-hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCC--HH----HHHHHHHHhcCCCC
Q 013328          287 EAVFGMFKCLL-R-RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA--DE----ETKDLWVQADIDGN  358 (445)
Q Consensus       287 ~~v~~~~~~~~-~-~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~--~~----~~~~~~~~~d~~~~  358 (445)
                      +.|+..+.... . .....++=+|+.||.+++ |+|+.+||+.++..+-  +  ...+  ++    -++++|.++|.|+|
T Consensus        87 ~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~-G~I~reel~~iv~~~~--~--~~~~~~~e~~~~i~d~t~~e~D~d~D  161 (187)
T KOG0034|consen   87 EEFVRLLSVFSPKASKREKLRFAFRVYDLDGD-GFISREELKQILRMMV--G--ENDDMSDEQLEDIVDKTFEEADTDGD  161 (187)
T ss_pred             HHHHHHHhhhcCCccHHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH--c--cCCcchHHHHHHHHHHHHHHhCCCCC
Confidence            56666666555 2 223478889999999999 9999999999999873  1  2233  33    35788999999999


Q ss_pred             ceeeHHHHHHHHhcc
Q 013328          359 GVVDYKEFQQRIWKT  373 (445)
Q Consensus       359 g~i~~~eF~~~~~~~  373 (445)
                      |.|+|+||.+.++..
T Consensus       162 G~IsfeEf~~~v~~~  176 (187)
T KOG0034|consen  162 GKISFEEFCKVVEKQ  176 (187)
T ss_pred             CcCcHHHHHHHHHcC
Confidence            999999999888764

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.63  E-value=6.4e-08  Score=79.26  Aligned_cols=93  Identities=18%  Similarity=0.223  Sum_probs=75.9

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---  374 (445)
                      +.++.+++++|..+|.|+| |.|+.++|+..+..+|     ...++++++.||.+.    .|-|+|.-|+.++-.+.   
T Consensus        28 q~QIqEfKEAF~~mDqnrD-G~IdkeDL~d~~aSlG-----k~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gt   97 (171)
T KOG0031|consen   28 QSQIQEFKEAFNLMDQNRD-GFIDKEDLRDMLASLG-----KIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGT   97 (171)
T ss_pred             HHHHHHHHHHHHHHhccCC-CcccHHHHHHHHHHcC-----CCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCC
Confidence            6889999999999999999 9999999999999999     889999999999885    78999999997664322   


Q ss_pred             --------ccccccccCCcccccccccccccccC
Q 013328          375 --------WSDQRNDLNDEDEDGFVKSSLEQTIG  400 (445)
Q Consensus       375 --------~~~~~~~~~~~~~~~~~~~~~~~~~g  400 (445)
                              .+.-.|.+..|.+++.....-+.+.|
T Consensus        98 dpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g  131 (171)
T KOG0031|consen   98 DPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMG  131 (171)
T ss_pred             CHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhc
Confidence                    23455666677777666555555555

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.62  E-value=5.7e-08  Score=84.63  Aligned_cols=82  Identities=22%  Similarity=0.152  Sum_probs=68.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTW  375 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~  375 (445)
                      .....+++|+.+|.|++ |+|+..||+.+|..+|     ..++++-++.|++.+|..++|.|.|++|++.+..    ...
T Consensus       122 ~i~~Wr~vF~~~D~D~S-G~I~~sEL~~Al~~~G-----y~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~  195 (221)
T KOG0037|consen  122 YINQWRNVFRTYDRDRS-GTIDSSELRQALTQLG-----YRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEA  195 (221)
T ss_pred             HHHHHHHHHHhcccCCC-CcccHHHHHHHHHHcC-----cCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHH
Confidence            34567889999999999 9999999999999999     8899999999999999988999999999976632    334


Q ss_pred             cccccccCCccc
Q 013328          376 SDQRNDLNDEDE  387 (445)
Q Consensus       376 ~~~~~~~~~~~~  387 (445)
                      +.++|....|.+
T Consensus       196 Fr~~D~~q~G~i  207 (221)
T KOG0037|consen  196 FRRRDTAQQGSI  207 (221)
T ss_pred             HHHhccccceeE
Confidence            455555555443

>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues

Probab=98.62  E-value=2.9e-07  Score=88.23  Aligned_cols=168  Identities=18%  Similarity=0.143  Sum_probs=87.2

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc-------CCCcE--EEEeecc-cC-----------h
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY-------ERSSI--ICLQEFW-VG-----------N   87 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~-------~~~DI--I~LQEv~-~~-----------~   87 (445)
                      .+-|+||||.+.. ..        +         ...+.++|..       ..|||  |+|||+. ..           .
T Consensus         4 ~v~v~TwNv~~~~-~~--------p---------~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~   65 (310)
T smart00128        4 KVLVGTWNVGGLK-AD--------P---------KVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKE   65 (310)
T ss_pred             EEEEEEEECCCcc-CC--------C---------hhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhH
Confidence            5789999998642 00        0         0344555544       67999  7799982 10           1


Q ss_pred             hhHHHHHHHHhhc-cCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCc
Q 013328           88 EELVDMYEKRLSD-AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQ  166 (445)
Q Consensus        88 ~~~~~~l~~~l~~-~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  166 (445)
                      ..+...+...|.. ..|..+..  ..-.+-++.||.+.+..+-+..........+  .+...  . .......+....+.
T Consensus        66 ~~W~~~i~~~l~~~~~Y~~v~~--~~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G--~~~~~--~-nKG~v~i~~~~~~~  138 (310)
T smart00128       66 RLWSKLIESSLNGDGQYNVLAK--VRLVGILVLVFVKANHLVYIKDVETFTVKTG--MGGLW--G-NKGAVAVRFKLSDT  138 (310)
T ss_pred             HHHHHHHHHhcCCCCceEEEee--eeecceEEEEEEehhhcCccceeEeeeeecc--cccee--e-cCceEEEEEEEcCc
Confidence            2234444455542 34554432  2334447788877663222211111000111  00000  0 00111133344678


Q ss_pred             eEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHc--CCCCCcEEEeecCCCCcC
Q 013328          167 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEH--NLKPIPIILCGDWNGSKR  223 (445)
Q Consensus       167 ~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~--~~~~~pvIl~GDFN~~p~  223 (445)
                      .++++|+||.+..  .....|..+...+++.+.--....  ......+|++||||---+
T Consensus       139 ~~~fv~~HL~a~~--~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~  195 (310)
T smart00128      139 SFCFVNSHLAAGA--SNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD  195 (310)
T ss_pred             EEEEEeecccccc--chhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence            9999999997743  345678888888866552100000  013467999999997543

Mg(2+)-dependent/Li(+)-sensitive enzymes.

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.59  E-value=3.1e-08  Score=79.66  Aligned_cols=95  Identities=16%  Similarity=0.145  Sum_probs=74.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC--CCceeeHHHHHHHHhccCcc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWKTTWS  376 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~~  376 (445)
                      ....+++++|..||..+| |+|+......+|+.+|     .++++.++.+.+.+++.+  +--.|+|++|+ .|+.... 
T Consensus         8 d~~~e~ke~F~lfD~~gD-~ki~~~q~gdvlRalG-----~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fL-pm~q~va-   79 (152)
T KOG0030|consen    8 DQMEEFKEAFLLFDRTGD-GKISGSQVGDVLRALG-----QNPTNAEVLKVLGQPKRREMNVKRLDFEEFL-PMYQQVA-   79 (152)
T ss_pred             chHHHHHHHHHHHhccCc-ccccHHHHHHHHHHhc-----CCCcHHHHHHHHcCcccchhhhhhhhHHHHH-HHHHHHH-
Confidence            455789999999999999 9999999999999999     999999999999999887  45789999999 4544332 


Q ss_pred             ccccccCCcccccccccccccccCe
Q 013328          377 DQRNDLNDEDEDGFVKSSLEQTIGF  401 (445)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~g~  401 (445)
                      ++.+....+++-++..+.|.+.-|+
T Consensus        80 knk~q~t~edfvegLrvFDkeg~G~  104 (152)
T KOG0030|consen   80 KNKDQGTYEDFVEGLRVFDKEGNGT  104 (152)
T ss_pred             hccccCcHHHHHHHHHhhcccCCcc
Confidence            2344444455555555666666554

>PTZ00183 centrin; Provisional

Probab=98.58  E-value=2.4e-07  Score=79.80  Aligned_cols=66  Identities=23%  Similarity=0.363  Sum_probs=60.5

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.+++ |.|+..||..++..+|     ..++.++++.++..+|.|++|.|+|+||++.+..
T Consensus        89 ~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         89 REEILKAFRLFDDDKT-GKISLKNLKRVAKELG-----ETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            3568899999999999 9999999999999998     7799999999999999999999999999976644

>PTZ00184 calmodulin; Provisional

Probab=98.57  E-value=2.2e-07  Score=79.08  Aligned_cols=64  Identities=27%  Similarity=0.551  Sum_probs=59.2

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|+.+|.+++ |.|+.+||+.+|..+|     ..++.++++.++..+|.+++|.|+|+||+..+.
T Consensus        84 ~~~~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         84 EEIKEAFKVFDRDGN-GFISAAELRHVMTNLG-----EKLTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHhhCCCCC-CeEeHHHHHHHHHHHC-----CCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            567889999999999 9999999999999998     778999999999999999999999999997653

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=98.53  E-value=2.8e-07  Score=70.06  Aligned_cols=69  Identities=13%  Similarity=0.197  Sum_probs=53.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH-hc-cCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......+..+|+.+-  |++++++..||+.+|.. ++ +-  ...-.++.++++|+.+|.|+||.|+|.||+..+
T Consensus         4 E~ai~~lI~~FhkYa--G~~~tLsk~Elk~Ll~~Elp~~l--~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv   74 (91)
T cd05024           4 EHSMEKMMLTFHKFA--GEKNYLNRDDLQKLMEKEFSEFL--KNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLI   74 (91)
T ss_pred             HHHHHHHHHHHHHHc--CCCCcCCHHHHHHHHHHHhHHHH--cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345567888999987  33379999999999965 21 00  033467889999999999999999999999655

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.23  E-value=1.8e-06  Score=51.02  Aligned_cols=26  Identities=35%  Similarity=0.740  Sum_probs=24.0

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      |++++|+.+|.|+||.|+++||+..+
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~   26 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMM   26 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            68899999999999999999999665

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.21  E-value=1.1e-06  Score=52.05  Aligned_cols=29  Identities=28%  Similarity=0.458  Sum_probs=26.8

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      +++++|+.+|+|+| |+|+.+||+.+|+.|
T Consensus         1 E~~~~F~~~D~d~d-G~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    1 ELKEAFREFDKDGD-GKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHHHSTTSS-SEEEHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCC-CcCCHHHHHHHHHhC
Confidence            47889999999999 999999999999875

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.19  E-value=4.4e-06  Score=79.39  Aligned_cols=72  Identities=22%  Similarity=0.363  Sum_probs=65.4

Q ss_pred             HHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          294 KCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       294 ~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...+.....++.+.|+.+|.+.| |.|+.+|+...|+.+|     .+++++++++++..+|+++++.|+++||-..+.
T Consensus        74 ~~Y~~~~E~~l~~~F~~iD~~hd-G~i~~~Ei~~~l~~~g-----i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l  145 (463)
T KOG0036|consen   74 KRYLDNKELELYRIFQSIDLEHD-GKIDPNEIWRYLKDLG-----IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL  145 (463)
T ss_pred             HHHHHHhHHHHHHHHhhhccccC-CccCHHHHHHHHHHhC-----CccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence            34445777889999999999999 9999999999999999     889999999999999999999999999986653

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.14  E-value=1.1e-05  Score=65.50  Aligned_cols=82  Identities=27%  Similarity=0.482  Sum_probs=64.4

Q ss_pred             HHHHHHHHHhhhhccc--hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHH----HHHHHHhcCCCCce
Q 013328          287 EAVFGMFKCLLRRASL--TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET----KDLWVQADIDGNGV  360 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~--~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~~~~~d~~~~g~  360 (445)
                      +.++.|+.........  .+.=+|+.+|-|+| +.|-..+|...+..|--    ..++++|+    ++++.+.|.||||+
T Consensus        91 ddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D-~~i~~~DL~~~l~~lTr----~eLs~eEv~~i~ekvieEAD~DgDgk  165 (189)
T KOG0038|consen   91 DDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGD-EFIGHDDLEKTLTSLTR----DELSDEEVELICEKVIEEADLDGDGK  165 (189)
T ss_pred             HHHHHHHHHHHhhChHHhhhhheeEEeecCCC-CcccHHHHHHHHHHHhh----ccCCHHHHHHHHHHHHHHhcCCCCCc
Confidence            6677776655433333  34457999999999 99999999999998831    45778775    67888999999999


Q ss_pred             eeHHHHHHHHhcc
Q 013328          361 VDYKEFQQRIWKT  373 (445)
Q Consensus       361 i~~~eF~~~~~~~  373 (445)
                      ++|.||-..+.+.
T Consensus       166 l~~~eFe~~i~ra  178 (189)
T KOG0038|consen  166 LSFAEFEHVILRA  178 (189)
T ss_pred             ccHHHHHHHHHhC
Confidence            9999999877663

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=98.10  E-value=9.8e-06  Score=71.06  Aligned_cols=73  Identities=19%  Similarity=0.321  Sum_probs=55.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCC-----CCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGH-----KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~-----~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+.+.-+|+.+|.|++ |+|+.+|+-.++..+ -+.+.     ...-.++-++++|+.+|.|+||.|+++||++....
T Consensus        97 t~eekl~w~F~lyD~dgd-G~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~  175 (193)
T KOG0044|consen   97 TLEEKLKWAFRLYDLDGD-GYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA  175 (193)
T ss_pred             cHHHHhhhhheeecCCCC-ceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence            444667778999999999 999999998888764 11111     01123455899999999999999999999976643

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.06  E-value=2.5e-06  Score=78.89  Aligned_cols=63  Identities=19%  Similarity=0.323  Sum_probs=51.5

Q ss_pred             HHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          305 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       305 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ++-|+.-|.|++ |.++.+||...|.--.    -..+..--|..-|...|+|+||+|+++||+.-|+.
T Consensus       166 e~rFk~AD~d~d-g~lt~EEF~aFLHPEe----~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~  228 (325)
T KOG4223|consen  166 EERFKAADQDGD-GSLTLEEFTAFLHPEE----HPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS  228 (325)
T ss_pred             HHHHhhcccCCC-CcccHHHHHhccChhh----cchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence            456999999999 9999999999875322    13344556788899999999999999999988865

>PLN02964 phosphatidylserine decarboxylase

Probab=98.04  E-value=6.5e-06  Score=85.02  Aligned_cols=63  Identities=22%  Similarity=0.452  Sum_probs=41.2

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +.++|+.+|.|++ |.|+.+||..+|..++     ...++++++.+|+.+|.|++|.|+++||.+.+..
T Consensus       181 i~~mf~~~D~Dgd-G~IdfdEFl~lL~~lg-----~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        181 ARRILAIVDYDED-GQLSFSEFSDLIKAFG-----NLVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             HHHHHHHhCCCCC-CeEcHHHHHHHHHHhc-----cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            5666666666666 6677667766666666     4556666666666666666667777766654433

>PLN02964 phosphatidylserine decarboxylase

Probab=97.97  E-value=1.3e-05  Score=82.86  Aligned_cols=87  Identities=11%  Similarity=0.185  Sum_probs=69.8

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH---HHHHHHHhcCCCCceeeHHHHHHHH--hc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE---TKDLWVQADIDGNGVVDYKEFQQRI--WK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~--~~  372 (445)
                      ..+..++.++|..+|+|++ |+|    |+.+++.+|+    ..+++++   ++.++..+|.|++|.|+|+||+..|  +.
T Consensus       139 ~kqi~elkeaF~lfD~dgd-G~i----Lg~ilrslG~----~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg  209 (644)
T PLN02964        139 TQEPESACESFDLLDPSSS-NKV----VGSIFVSCSI----EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG  209 (644)
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcC----HHHHHHHhCC----CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc
Confidence            5667899999999999999 997    9999999993    2577776   8999999999999999999998655  22


Q ss_pred             --------cCccccccccCCccccccccc
Q 013328          373 --------TTWSDQRNDLNDEDEDGFVKS  393 (445)
Q Consensus       373 --------~~~~~~~~~~~~~~~~~~~~~  393 (445)
                              ..++...|.+..|.+..+|..
T Consensus       210 ~~~seEEL~eaFk~fDkDgdG~Is~dEL~  238 (644)
T PLN02964        210 NLVAANKKEELFKAADLNGDGVVTIDELA  238 (644)
T ss_pred             cCCCHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence                    224455677777777766643

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=97.97  E-value=1.4e-05  Score=76.41  Aligned_cols=70  Identities=24%  Similarity=0.379  Sum_probs=60.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |.||.+||+.+.+-++- +-...++++++-++-+.+|-|+||.||++||+++.
T Consensus       544 r~ks~LetiF~~iD~D~S-G~isldEF~~a~~l~~s-h~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAF  613 (631)
T KOG0377|consen  544 RNKSSLETIFNIIDADNS-GEISLDEFRTAWKLLSS-HMNGAISDDEILELARSMDLNKDGKIDLNEFLEAF  613 (631)
T ss_pred             hchhhHHHHHHHhccCCC-CceeHHHHHHHHHHHHh-hcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHH
Confidence            445678889999999999 99999999999887751 11366889999999999999999999999999765

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.96  E-value=6.4e-06  Score=49.79  Aligned_cols=30  Identities=23%  Similarity=0.486  Sum_probs=26.6

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHH-Hhc
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALE-QLN  333 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~-~~g  333 (445)
                      +++++|+.+|.|++ |+|+.+||+.+|+ ++|
T Consensus         1 ~l~~~F~~~D~d~d-G~I~~~el~~~l~~~lG   31 (31)
T PF13405_consen    1 RLREAFKMFDKDGD-GFIDFEELRAILRKSLG   31 (31)
T ss_dssp             HHHHHHHHH-TTSS-SEEEHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHCCCCC-CcCcHHHHHHHHHHhcC
Confidence            47889999999999 9999999999999 676

...

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=97.88  E-value=3.2e-05  Score=67.87  Aligned_cols=76  Identities=21%  Similarity=0.302  Sum_probs=61.0

Q ss_pred             HHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHH
Q 013328          289 VFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       289 v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      +-.++...+  .....-...+|+.||.|++ |.|+..||-.+|..+-     ..-.++.++-.++.+|.|+||.|+++|+
T Consensus        49 F~~i~~~~fp~gd~~~y~~~vF~~fD~~~d-g~i~F~Efi~als~~~-----rGt~eekl~w~F~lyD~dgdG~It~~Em  122 (193)
T KOG0044|consen   49 FREIYASFFPDGDASKYAELVFRTFDKNKD-GTIDFLEFICALSLTS-----RGTLEEKLKWAFRLYDLDGDGYITKEEM  122 (193)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHhcccCC-CCcCHHHHHHHHHHHc-----CCcHHHHhhhhheeecCCCCceEcHHHH
Confidence            444445444  4555677889999999999 9999999888887764     3456777888899999999999999999


Q ss_pred             HHHH
Q 013328          367 QQRI  370 (445)
Q Consensus       367 ~~~~  370 (445)
                      +..+
T Consensus       123 l~iv  126 (193)
T KOG0044|consen  123 LKIV  126 (193)
T ss_pred             HHHH
Confidence            8655

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=97.84  E-value=6.1e-05  Score=59.46  Aligned_cols=64  Identities=23%  Similarity=0.361  Sum_probs=55.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|..+|. ++ |.|+.++.+.+|..-|       ++.+.+.+|..-.|.|+||.++++||+-+|+
T Consensus         7 ~e~~~y~~~F~~l~~-~~-g~isg~~a~~~f~~S~-------L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~   70 (104)
T PF12763_consen    7 EEKQKYDQIFQSLDP-QD-GKISGDQAREFFMKSG-------LPRDVLAQIWNLADIDNDGKLDFEEFAIAMH   70 (104)
T ss_dssp             CHHHHHHHHHHCTSS-ST-TEEEHHHHHHHHHHTT-------SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CC-CeEeHHHHHHHHHHcC-------CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence            345677889999984 68 9999999999999977       8899999999999999999999999986553

...

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=97.83  E-value=6.9e-05  Score=49.93  Aligned_cols=47  Identities=19%  Similarity=0.366  Sum_probs=38.6

Q ss_pred             cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          319 YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       319 ~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++..|++.+|+.++     ..+++.-+..+|+++|++++|.++.+||++..
T Consensus         1 kmsf~Evk~lLk~~N-----I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy   47 (51)
T PF14788_consen    1 KMSFKEVKKLLKMMN-----IEMDDEYARQLFQECDKSQSGRLEGEEFEEFY   47 (51)
T ss_dssp             EBEHHHHHHHHHHTT---------HHHHHHHHHHH-SSSSSEBEHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHc-----cCcCHHHHHHHHHHhcccCCCCccHHHHHHHH
Confidence            478999999999999     77999999999999999999999999998643

...

>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.83  E-value=0.00011  Score=76.75  Aligned_cols=166  Identities=17%  Similarity=0.062  Sum_probs=87.7

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcC-------CCcE--EEEeecc-----------cC-h
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYE-------RSSI--ICLQEFW-----------VG-N   87 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~-------~~DI--I~LQEv~-----------~~-~   87 (445)
                      .+=|.||||.+-..          .        .+.-|.+||...       -|||  |+||||-           .. .
T Consensus       538 ~IfvgTfNvNG~s~----------~--------~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~tk~  599 (1080)
T KOG0566|consen  538 SIFVGTFNVNGRSA----------A--------FKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSASTTKR  599 (1080)
T ss_pred             EEEEEeeeccCccc----------c--------chhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccChHHH
Confidence            46678999985210          0        113455555433       3776  6789992           01 1


Q ss_pred             hhHHHHHHHHhhccCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCC--CceeeeecccccccccccccCCCC
Q 013328           88 EELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGDLR  165 (445)
Q Consensus        88 ~~~~~~l~~~l~~~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g  165 (445)
                      .-|.+.+...|..+.-.|+......=.+--+.+|.|..+.|.+.........++  +..+.       ......+.....
T Consensus       600 ~~Wee~i~~~Ln~~~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgN-------KGAVAIrf~~~~  672 (1080)
T KOG0566|consen  600 RFWEEKILKTLNRYKNKYVLLRSEQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGN-------KGAVAIRFVYHA  672 (1080)
T ss_pred             HHHHHHHHHHhcCCCCceEEEehhhhheeeEEEEEcccccchhhhcccceeecccccccCC-------CceEEEEEEecc
Confidence            236666777777544334433222222234456667776666654444333322  11000       000012333457


Q ss_pred             ceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCC
Q 013328          166 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGS  221 (445)
Q Consensus       166 ~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~  221 (445)
                      ..|+++|.||.+..  .....|......+.+.|.=-.-..-....-|+.|||||--
T Consensus       673 TsfCFv~SHlAAG~--snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYR  726 (1080)
T KOG0566|consen  673 TSFCFVCSHLAAGQ--SNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYR  726 (1080)
T ss_pred             ccEEEEeccccccc--chHhhhhhhHHHHHHhccccCCccccCCceEEEeccccee
Confidence            78999999997743  4455676666666665532111111244569999999964

>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B

Probab=97.82  E-value=3.7e-05  Score=62.64  Aligned_cols=89  Identities=20%  Similarity=0.346  Sum_probs=40.8

Q ss_pred             EEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc------------chhHhhhhCCC
Q 013328          168 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG------------HVYKFLRSQGF  235 (445)
Q Consensus       168 v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s------------~~~~~l~~~g~  235 (445)
                      +.|+|+  |.|+..        ....+.+.+.++.+..  ...++||+||||.....            ...+.+.+.++
T Consensus         1 i~i~~v--Y~pp~~--------~~~~~~~~l~~~~~~~--~~~~~Ii~GDFN~~~~~w~~~~~~~~~~~~l~~~~~~~~l   68 (119)
T PF14529_consen    1 ITIISV--YAPPSS--------EREEFFDQLRQLLKNL--PPAPIIIGGDFNAHHPNWDSSNTNSRRGEQLLDWLDSHNL   68 (119)
T ss_dssp             EEEEEE--E--TTS---------CHHHHHHHHHHHHCC--TTSSEEEEEE-----GGGT-SCHHHHHHHHHHHHHHHCTE
T ss_pred             CEEEEE--ECCCCc--------cHHHHHHHHHHHHHhC--CCCCEEEEeECCCCchhhhhccccchhHHHHHHHhhhcee
Confidence            567888  777743        2333444444444432  22289999999995321            12234444455


Q ss_pred             cccccccccCCCCCCCcceeccCCCCcccccceeeecCCcccc
Q 013328          236 VSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYR  278 (445)
Q Consensus       236 ~d~~~~~~~~~~~~~~t~~~~~~~~~~~~rIDyi~~~~~~~~~  278 (445)
                      .+.    +.  ....+||.....    ..+||++|++......
T Consensus        69 ~~~----~~--~~~~~T~~~~~~----~s~iD~~~~s~~~~~~  101 (119)
T PF14529_consen   69 VDL----NP--PGRPPTFISNSH----GSRIDLILTSDNLLSW  101 (119)
T ss_dssp             EE---------TT---SEEECCC----EE--EEEEEECCGCCC
T ss_pred             eee----ec--CCCCCcccCCCC----CceEEEEEECChHHhc
Confidence            533    11  112366655442    5789999998776543

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.60  E-value=0.00011  Score=41.74  Aligned_cols=24  Identities=42%  Similarity=0.735  Sum_probs=21.6

Q ss_pred             HHHHHHHhcCCCCceeeHHHHHHH
Q 013328          346 TKDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       346 ~~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      ++++|+.+|.|+||.|+++||.+.
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~   24 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRL   24 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHH
Confidence            467899999999999999999864

...

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.57  E-value=5e-05  Score=43.19  Aligned_cols=25  Identities=28%  Similarity=0.469  Sum_probs=22.5

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEAL  329 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l  329 (445)
                      |+++|+.+|.|+| |.|+.+||+.++
T Consensus         1 l~~~F~~~D~d~D-G~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGD-GKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSS-SEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCC-CcCCHHHHHHHC
Confidence            5678999999999 999999999864

...

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=97.45  E-value=0.0002  Score=70.34  Aligned_cols=53  Identities=15%  Similarity=0.355  Sum_probs=46.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |.|+.+||.      +            ++.+|..+|.|+||.|+++||.+.+
T Consensus       331 ~~~~~l~~aF~~~D~dgd-G~Is~~E~~------~------------~~~~F~~~D~d~DG~Is~eEf~~~~  383 (391)
T PRK12309        331 AFTHAAQEIFRLYDLDGD-GFITREEWL------G------------SDAVFDALDLNHDGKITPEEMRAGL  383 (391)
T ss_pred             hhhHHHHHHHHHhCCCCC-CcCcHHHHH------H------------HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            344678899999999999 999999993      2            4679999999999999999999755

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.37  E-value=0.00021  Score=66.36  Aligned_cols=76  Identities=17%  Similarity=0.281  Sum_probs=59.9

Q ss_pred             HHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHH
Q 013328          291 GMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       291 ~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      ..+..+. .+....+..+|..+|.+++ |.|+..||+.-+...-     ......++.+-+...|.|.||.|+|+|+...
T Consensus        65 ~~fd~l~~ee~~~rl~~l~~~iD~~~D-gfv~~~El~~wi~~s~-----k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~  138 (325)
T KOG4223|consen   65 DEFDQLTPEESQERLGKLVPKIDSDSD-GFVTESELKAWIMQSQ-----KKYVVEEAARRWDEYDKNKDGFITWEEYLPQ  138 (325)
T ss_pred             hhhhhhCcchhHHHHHHHHhhhcCCCC-CceeHHHHHHHHHHHH-----HHHHHHHHHHHHHHhccCccceeeHHHhhhh
Confidence            4444444 5677889999999999999 9999999998776543     2333556777888899999999999999977


Q ss_pred             Hhc
Q 013328          370 IWK  372 (445)
Q Consensus       370 ~~~  372 (445)
                      ++.
T Consensus       139 ~~~  141 (325)
T KOG4223|consen  139 TYG  141 (325)
T ss_pred             hhh
Confidence            764

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=97.34  E-value=0.00011  Score=59.08  Aligned_cols=63  Identities=13%  Similarity=0.196  Sum_probs=46.7

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      ......+.-.|..+|.|+| |.|+..||+.+...+.       ..+.-++.+++..|.|+||.|++.|+..
T Consensus        50 ~~~~~~~~W~F~~LD~n~d-~~L~~~El~~l~~~l~-------~~e~C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   50 SECKRVVHWKFCQLDRNKD-GVLDRSELKPLRRPLM-------PPEHCARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             GGGHHHHHHHHHHH--T-S-SEE-TTTTGGGGSTTS-------TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhhhhhhhHhhhcCCCC-CccCHHHHHHHHHHHh-------hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence            4455667777999999999 9999999998765443       5566789999999999999999999963

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=97.29  E-value=0.00044  Score=67.93  Aligned_cols=71  Identities=21%  Similarity=0.342  Sum_probs=59.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +....++.+.|..+| |++ |+|+..||..++.+.++..  .....+++++++...+.|.+|.|+|+||+..++.
T Consensus        15 q~El~~l~~kF~~~d-~~~-G~v~~~~l~~~f~k~~~~~--g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~   85 (627)
T KOG0046|consen   15 QEELRELKEKFNKLD-DQK-GYVTVYELPDAFKKAKLPL--GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN   85 (627)
T ss_pred             HHHHHHHHHHHHhhc-CCC-CeeehHHhHHHHHHhcccc--cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence            344567889999999 999 9999999999999987321  2245789999999999999999999999975544

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.21  E-value=0.00079  Score=52.55  Aligned_cols=62  Identities=24%  Similarity=0.485  Sum_probs=46.2

Q ss_pred             hccccccCCCCCcccHHHHHHHHHHhcc---CCC-CCC-CCHHHHHH----HHHHhcCCCCceeeHHHHHHH
Q 013328          307 AFAFLKADNDGDYITYSGFCEALEQLNL---TGH-KHG-LADEETKD----LWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       307 ~F~~~D~~~~~G~i~~~el~~~l~~~g~---~~~-~~~-~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      .|++.|.|++ |.|+-=||..++.-.--   .|+ +.+ +++.|++.    +++.-|.|+||.|||.||++.
T Consensus        72 YF~MHDldkn-n~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~  142 (144)
T KOG4065|consen   72 YFSMHDLDKN-NFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR  142 (144)
T ss_pred             hhhhhccCcC-CcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence            5888999999 99999999999875421   122 434 45556554    455678999999999999863

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.04  E-value=0.0011  Score=39.89  Aligned_cols=27  Identities=22%  Similarity=0.550  Sum_probs=22.7

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +++.+|..+|.|+||.|+++||...+-
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            478899999999999999999986553

...

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=96.94  E-value=0.0013  Score=71.67  Aligned_cols=69  Identities=13%  Similarity=0.194  Sum_probs=60.1

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCC--C-----HHHHHHHHHHhcCCCCceeeHHHHHHHHhcc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--A-----DEETKDLWVQADIDGNGVVDYKEFQQRIWKT  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--~-----~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~  373 (445)
                      -.++.-+|+.||++.+ |.++..+|+.+|+.+|     .++  -     +.+.+.+|...|++.+|.|+..+|+++|...
T Consensus      2252 L~EFs~~fkhFDkek~-G~Ldhq~F~sCLrslg-----Y~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKEKN-GRLDHQHFKSCLRSLG-----YDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred             HHHHHHHHHHhchhhc-cCCcHHHHHHHHHhcC-----CCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence            3467778999999999 9999999999999999     443  2     3479999999999999999999999999775


Q ss_pred             Cc
Q 013328          374 TW  375 (445)
Q Consensus       374 ~~  375 (445)
                      ..
T Consensus      2326 ET 2327 (2399)
T KOG0040|consen 2326 ET 2327 (2399)
T ss_pred             cc
Confidence            54

>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]

Probab=96.46  E-value=0.009  Score=57.29  Aligned_cols=68  Identities=25%  Similarity=0.479  Sum_probs=45.3

Q ss_pred             CcEEEeecCCCCcCcc-------------------------hh-HhhhhCC-CcccccccccCCCCCCCcceeccC--CC
Q 013328          210 IPIILCGDWNGSKRGH-------------------------VY-KFLRSQG-FVSSYDTAHQYTDADAHKWVSHRN--HR  260 (445)
Q Consensus       210 ~pvIl~GDFN~~p~s~-------------------------~~-~~l~~~g-~~d~~~~~~~~~~~~~~t~~~~~~--~~  260 (445)
                      .|++.|||.|..+...                         .+ ..+.+.| ++|+|+..+.........|..-.+  ..
T Consensus       213 ~~~v~~gd~nvs~~~i~~~~~~~~~~~~~~~~~~~t~e~R~~~~~~~~~~~~~iDt~r~~~~~~~~~~t~Wk~~~~~r~~  292 (335)
T KOG1294|consen  213 APVVICGDLNVSHEEIDPSKPLVSPAGNTLSNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMPNGRQR  292 (335)
T ss_pred             CcceeccccccchhhccccccccccccCCcCCCCCCHHHhhhHHHhhccCCcceeehhhhcCCccccccchhhccccccC
Confidence            5899999999865321                         12 2334556 889999887765545666755432  33


Q ss_pred             CcccccceeeecCCccc
Q 013328          261 GNICGVDFIWLLNPNKY  277 (445)
Q Consensus       261 ~~~~rIDyi~~~~~~~~  277 (445)
                      +...|+||+.++.+...
T Consensus       293 ~~~~r~dy~~Vsk~~~n  309 (335)
T KOG1294|consen  293 GHGERCDYILVSKPGPN  309 (335)
T ss_pred             CCCCceeEEEecCcCCC
Confidence            45679999999877643

>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]

Probab=96.45  E-value=0.0056  Score=66.03  Aligned_cols=82  Identities=26%  Similarity=0.404  Sum_probs=70.0

Q ss_pred             chhHHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeH
Q 013328          284 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY  363 (445)
Q Consensus       284 s~~~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~  363 (445)
                      +.++.++..++++++-+...-...|+.+|.||. |.|+..+|+++|....      ..+..|++-++.....|.+..++|
T Consensus      4039 ~nvemilkffdmflklkdltssdtfkeydpdgk-giiskkdf~kame~~k------~ytqse~dfllscae~dend~~~y 4111 (5019)
T KOG2243|consen 4039 NNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGK-GIISKKDFHKAMEGHK------HYTQSEIDFLLSCAEADENDMFDY 4111 (5019)
T ss_pred             ccHHHHHHHHHHHHHHhhccccccchhcCCCCC-ccccHHHHHHHHhccc------cchhHHHHHHHHhhccCccccccH
Confidence            356778888888776666667778999999999 9999999999998643      478889999999999999999999


Q ss_pred             HHHHHHHhc
Q 013328          364 KEFQQRIWK  372 (445)
Q Consensus       364 ~eF~~~~~~  372 (445)
                      ++|+..+..
T Consensus      4112 ~dfv~rfhe 4120 (5019)
T KOG2243|consen 4112 EDFVDRFHE 4120 (5019)
T ss_pred             HHHHHHhcC
Confidence            999987754

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=95.98  E-value=0.005  Score=54.80  Aligned_cols=65  Identities=20%  Similarity=0.290  Sum_probs=49.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHH-HhccCCCCCCC--CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALE-QLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~-~~g~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....+..+|+..|.|.| |+|+..|+++-+. +..     ..+  ..++-+-.|+..|.|+||.|+++||.-.+
T Consensus        99 srrklmviFsKvDVNtD-rkisAkEmqrwImekta-----EHfqeameeSkthFraVDpdgDGhvsWdEykvkF  166 (362)
T KOG4251|consen   99 SRRKLMVIFSKVDVNTD-RKISAKEMQRWIMEKTA-----EHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKF  166 (362)
T ss_pred             HHHHHHHHHhhcccCcc-ccccHHHHHHHHHHHHH-----HHHHHHHhhhhhheeeeCCCCCCceehhhhhhHH
Confidence            34567889999999999 9999999987554 332     222  22345667888999999999999996433

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=95.97  E-value=0.0059  Score=59.05  Aligned_cols=71  Identities=18%  Similarity=0.199  Sum_probs=48.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH------hccCCCCCCCCHH-----HHHH--HHHHhcCCCCceeeHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ------LNLTGHKHGLADE-----ETKD--LWVQADIDGNGVVDYK  364 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~------~g~~~~~~~~~~~-----~~~~--~~~~~d~~~~g~i~~~  364 (445)
                      .......+-+|++||.||+ |.|+.+||..+..-      +|.. |...++..     ++..  +..-|..+++++++++
T Consensus       229 S~p~~~F~IAFKMFD~dgn-G~IdkeEF~~v~~li~sQ~~~g~~-hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~d  306 (489)
T KOG2643|consen  229 SIPERNFRIAFKMFDLDGN-GEIDKEEFETVQQLIRSQTSVGVR-HRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSID  306 (489)
T ss_pred             ccCcccceeeeeeeecCCC-CcccHHHHHHHHHHHHhcccccee-cccCccccceehhhhhhhHHHHhhccCCCccccHH
Confidence            4555667889999999999 99999999887742      2211 11111111     2222  3445789999999999


Q ss_pred             HHHHHH
Q 013328          365 EFQQRI  370 (445)
Q Consensus       365 eF~~~~  370 (445)
                      ||++.+
T Consensus       307 eF~~F~  312 (489)
T KOG2643|consen  307 EFLKFQ  312 (489)
T ss_pred             HHHHHH
Confidence            998766

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=95.96  E-value=0.013  Score=51.58  Aligned_cols=63  Identities=25%  Similarity=0.346  Sum_probs=43.3

Q ss_pred             hhccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCce-eeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV-VDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~eF~~~~  370 (445)
                      ......|...|+.+|.+ ++ |.|+.+||..+... .     .   ..-.+.++..++.+++|. |+|++|++.+
T Consensus        29 ~~EI~~L~~rF~kl~~~~~~-g~lt~eef~~i~~~-~-----~---Np~~~rI~~~f~~~~~~~~v~F~~Fv~~l   93 (187)
T KOG0034|consen   29 ANEIERLYERFKKLDRNNGD-GYLTKEEFLSIPEL-A-----L---NPLADRIIDRFDTDGNGDPVDFEEFVRLL   93 (187)
T ss_pred             HHHHHHHHHHHHHhcccccc-CccCHHHHHHHHHH-h-----c---CcHHHHHHHHHhccCCCCccCHHHHHHHH
Confidence            34556677778888887 66 88888888877732 2     1   123467777777777777 8888888655

>smart00054 EFh EF-hand, calcium binding motif

Probab=95.81  E-value=0.008  Score=34.37  Aligned_cols=28  Identities=25%  Similarity=0.475  Sum_probs=25.0

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      +++++|+.+|.+++ |.|+..||..+++.
T Consensus         1 ~~~~~f~~~d~~~~-g~i~~~e~~~~~~~   28 (29)
T smart00054        1 ELKEAFRLFDKDGD-GKIDFEEFKDLLKA   28 (29)
T ss_pred             CHHHHHHHHCCCCC-CcEeHHHHHHHHHh
Confidence            36789999999999 99999999999875

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>smart00054 EFh EF-hand, calcium binding motif

Probab=95.74  E-value=0.013  Score=33.47  Aligned_cols=26  Identities=35%  Similarity=0.685  Sum_probs=22.8

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++.+++.+|.+++|.|+++||...+
T Consensus         1 ~~~~~f~~~d~~~~g~i~~~e~~~~~   26 (29)
T smart00054        1 ELKEAFRLFDKDGDGKIDFEEFKDLL   26 (29)
T ss_pred             CHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            36789999999999999999998654

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=95.35  E-value=0.036  Score=41.85  Aligned_cols=67  Identities=21%  Similarity=0.373  Sum_probs=52.9

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC----CCceeeHHHHHHHHhccC
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID----GNGVVDYKEFQQRIWKTT  374 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~----~~g~i~~~eF~~~~~~~~  374 (445)
                      ++..+|+.+-. +. +.|+.++|+..|+.-.  ++ ...+.++++.+|..+..+    ..+.+++++|..+|..+.
T Consensus         1 ei~~if~~ys~-~~-~~mt~~~f~~FL~~eQ--~~-~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~   71 (83)
T PF09279_consen    1 EIEEIFRKYSS-DK-EYMTAEEFRRFLREEQ--GE-PRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE   71 (83)
T ss_dssp             HHHHHHHHHCT-TS-SSEEHHHHHHHHHHTS--S--TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred             CHHHHHHHHhC-CC-CcCCHHHHHHHHHHHh--cc-ccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence            46788998854 66 8999999999998763  01 235899999999998655    479999999999887643

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=95.20  E-value=0.033  Score=38.08  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=28.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      -...++..+|..+|.|++ |.|+.+||..++..
T Consensus        22 ~s~~e~~~l~~~~D~~~~-G~I~~~EF~~~~~~   53 (54)
T PF13833_consen   22 LSEEEVDRLFREFDTDGD-GYISFDEFISMMQR   53 (54)
T ss_dssp             SCHHHHHHHHHHHTTSSS-SSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcccCCC-CCCCHHHHHHHHHh
Confidence            445679999999999999 99999999998864

...

>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional

Probab=94.29  E-value=0.071  Score=49.27  Aligned_cols=62  Identities=19%  Similarity=0.257  Sum_probs=39.6

Q ss_pred             ccCCCCceEEEEEeeeeCCCC---------CCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc
Q 013328          160 RNGDLRQEILIVNTHLLFPHD---------SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH  225 (445)
Q Consensus       160 ~~~~~g~~v~v~n~HL~~~~~---------~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~  225 (445)
                      +....+..|.++|+||.....         ..+...|..-...++..+.....    ...|+++.||||.--+..
T Consensus        74 rw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~----~~~~lF~fGDfNyRld~~  144 (356)
T PTZ00312         74 SLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFIS----PSDPLFIFGDFNVRLDGH  144 (356)
T ss_pred             EEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccC----CCCcEEEeccceeeeccc
Confidence            344567889999999966321         12344555555555554444332    567899999999865543

>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional

Probab=94.01  E-value=0.19  Score=51.50  Aligned_cols=61  Identities=20%  Similarity=0.180  Sum_probs=37.7

Q ss_pred             cCCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHH--HHHH----cCCCCCcEEEeecCCCC
Q 013328          161 NGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVES--YQKE----HNLKPIPIILCGDWNGS  221 (445)
Q Consensus       161 ~~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~--~~~~----~~~~~~pvIl~GDFN~~  221 (445)
                      +...+..|+++|+||.++........|..+...++..+.=  ....    .-....-+|++||||--
T Consensus       415 ~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYR  481 (621)
T PLN03191        415 MSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYR  481 (621)
T ss_pred             EEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCcccc
Confidence            3445789999999998865433445677777777654310  0000    00123469999999964

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=93.74  E-value=0.32  Score=47.43  Aligned_cols=80  Identities=18%  Similarity=0.307  Sum_probs=55.5

Q ss_pred             HHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCC--------CCC------------------
Q 013328          290 FGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKH--------GLA------------------  342 (445)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~--------~~~------------------  342 (445)
                      +..+...+.....++...|+.+|.+++ |+|+...-..++..+ ||. .+.        +.+                  
T Consensus       452 lk~Lrerl~s~~sdL~~eF~~~D~~ks-G~lsis~Wa~~mE~i~~L~-LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~  529 (631)
T KOG0377|consen  452 LKELRERLRSHRSDLEDEFRKYDPKKS-GKLSISHWAKCMENITGLN-LPWRLLRPKLANGSDDGKVEYKSTLDNLDTEV  529 (631)
T ss_pred             HHHHHHHHHhhhhHHHHHHHhcChhhc-CeeeHHHHHHHHHHHhcCC-CcHHHhhhhccCCCcCcceehHhHHHHhhhhh
Confidence            334444445667789999999999999 999999998888763 321 000        000                  


Q ss_pred             -H---------------HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          343 -D---------------EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       343 -~---------------~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                       .               ..++.+|..+|.|++|.|+.+||.. +|.
T Consensus       530 ~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~-a~~  574 (631)
T KOG0377|consen  530 ILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRT-AWK  574 (631)
T ss_pred             HHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHH-HHH
Confidence             0               1135678889999999999999984 443

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=93.64  E-value=0.1  Score=37.17  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=23.9

Q ss_pred             HHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          346 TKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       346 ~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ++++|+.+|.|++|.|+.+||...+..
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~   28 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKH   28 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHH
Confidence            678999999999999999999976644

...

>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]

Probab=92.77  E-value=0.14  Score=47.46  Aligned_cols=64  Identities=22%  Similarity=0.219  Sum_probs=46.4

Q ss_pred             ccccCCCCceEEEEEeeeeC--------CC-CCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc
Q 013328          158 QCRNGDLRQEILIVNTHLLF--------PH-DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH  225 (445)
Q Consensus       158 ~~~~~~~g~~v~v~n~HL~~--------~~-~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~  225 (445)
                      ..+..+.|..+.++|.||.-        .. ...+...|..++..+++.|..-.    .....++|.||||..-++.
T Consensus       161 ~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~----~~~~~~fVfGdfNfrLds~  233 (391)
T KOG1976|consen  161 LARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEG----LRNDAIFVFGDFNFRLDST  233 (391)
T ss_pred             ceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhc----cCceEEEEecccccccchH
Confidence            45666789999999999932        11 12456788899999888876532    1445789999999987764

>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes

Probab=92.59  E-value=0.028  Score=40.54  Aligned_cols=56  Identities=21%  Similarity=0.280  Sum_probs=39.2

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC-------CCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID-------GNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~-------~~g~i~~~eF~~~~  370 (445)
                      .+.+.++|+.+ .++. ++|+..||+..|.            +++++-++..+..-       ..|.+||..|++.+
T Consensus         5 ~eqv~~aFr~l-A~~K-pyVT~~dLr~~l~------------pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l   67 (69)
T PF08726_consen    5 AEQVEEAFRAL-AGGK-PYVTEEDLRRSLT------------PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL   67 (69)
T ss_dssp             CHHHHHHHHHH-CTSS-SCEEHHHHHHHS-------------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred             HHHHHHHHHHH-HcCC-CcccHHHHHHHcC------------cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence            46788999999 6777 9999999998843            22345555555432       23789999998543

EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.38  E-value=0.15  Score=52.86  Aligned_cols=65  Identities=23%  Similarity=0.403  Sum_probs=57.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++.+|..+|+..+ |++|-..-+.+|..-|       ++...+-.|..-.|.|+||+++-+||+-.|+
T Consensus       192 ~~klKY~QlFNa~Dktrs-G~Lsg~qaR~aL~qS~-------Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~  256 (1118)
T KOG1029|consen  192 HNKLKYRQLFNALDKTRS-GYLSGQQARSALGQSG-------LPQNQLAHIWTLSDVDGDGKLSADEFILAMH  256 (1118)
T ss_pred             hhhhHHHHHhhhcccccc-cccccHHHHHHHHhcC-------CchhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence            344678899999999999 9999999999998867       7788889999999999999999999985554

>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]

Probab=91.97  E-value=0.44  Score=46.73  Aligned_cols=56  Identities=20%  Similarity=0.090  Sum_probs=35.8

Q ss_pred             CCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCC
Q 013328          164 LRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGS  221 (445)
Q Consensus       164 ~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~  221 (445)
                      ....++++|.||.+..  ...++|......+...|.--....-.....++++||||.-
T Consensus       163 ~~t~~cFv~shlaag~--~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyR  218 (460)
T COG5411         163 ERTSFCFVNSHLAAGV--NNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYR  218 (460)
T ss_pred             ecCCcEEEecchhccc--ccHHHHHHHHHHHHHheecCCCceecccceEEEecccCce
Confidence            4567999999997743  4566788777777665532100000123449999999953

>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []

Probab=90.89  E-value=0.91  Score=38.72  Aligned_cols=63  Identities=10%  Similarity=0.275  Sum_probs=45.5

Q ss_pred             HHhcccc---ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          305 TDAFAFL---KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       305 ~~~F~~~---D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++|..|   -..+. ..++..-|..+|+..||.+  ..++..+++-+|..+-..+...|+|++|+..|
T Consensus         2 ~~~F~~f~~fG~~~~-~~m~~~~F~Kl~kD~~i~d--~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL   67 (154)
T PF05517_consen    2 EAVFKAFASFGKKNG-TEMDSKNFAKLCKDCGIID--KKLTSTDVDIIFSKVKAKGARKITFEQFLEAL   67 (154)
T ss_dssp             HHHHHHHHCSSTSTS-SEEEHHHHHHHHHHTSS----SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcc-ccccHHHHHHHHHHcCCCC--CCCchHHHHHHHHHhhcCCCcccCHHHHHHHH
Confidence            3445444   34444 6899999999999987642  23888999999999877777889999998766

It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.

>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]

Probab=90.32  E-value=0.43  Score=44.32  Aligned_cols=64  Identities=14%  Similarity=0.273  Sum_probs=45.7

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHH-h-ccCCCCCCCCHHHH-----------HHHHHHhcCCCCceeeHHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQ-L-NLTGHKHGLADEET-----------KDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~-~-g~~~~~~~~~~~~~-----------~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      -.-.|...|.|+| |.++-.||..++.. | ..++  ....++++           +.+|+.+|.|.|..|+.+||+..-
T Consensus       246 PKTFF~LHD~NsD-GfldeqELEaLFtkELEKvYd--pkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t  322 (442)
T KOG3866|consen  246 PKTFFALHDLNSD-GFLDEQELEALFTKELEKVYD--PKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT  322 (442)
T ss_pred             cchheeeeccCCc-ccccHHHHHHHHHHHHHHhcC--CCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence            3457899999999 99999999888764 1 1100  11112221           467889999999999999999544

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=90.23  E-value=0.43  Score=36.51  Aligned_cols=31  Identities=16%  Similarity=0.311  Sum_probs=28.2

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .++.++++.+|.|+| |.|+.+||..++..+.
T Consensus        47 ~~v~~mi~~~D~d~D-G~I~F~EF~~l~~~l~   77 (89)
T cd05022          47 EGLEEKMKNLDVNQD-SKLSFEEFWELIGELA   77 (89)
T ss_pred             HHHHHHHHHhCCCCC-CCCcHHHHHHHHHHHH
Confidence            679999999999999 9999999999887764

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=90.17  E-value=0.4  Score=48.44  Aligned_cols=64  Identities=30%  Similarity=0.440  Sum_probs=57.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...+.-|..+|.|+. |+++.+++..+|+..+     .+.+++.+.+++++.|.+-+|.+...||.+.+.
T Consensus       593 ~~~~~rf~~lD~~k~-~~~~i~~v~~vlk~~~-----~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s  656 (680)
T KOG0042|consen  593 LRRKTRFAFLDADKK-AYQAIADVLKVLKSEN-----VGWDEDRLHEELQEADENLNGFVELREFLQLMS  656 (680)
T ss_pred             HHHHHHHHhhcchHH-HHHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHH
Confidence            344567999999999 9999999999999988     778999999999999999999999999986653

>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]

Probab=89.99  E-value=0.4  Score=44.95  Aligned_cols=97  Identities=11%  Similarity=0.125  Sum_probs=66.9

Q ss_pred             cceeeecCCcccccccccchhHHHHHHHHHhh-h-----------hcc-c-hHHHhccccccCCCCCcccHHHH---HHH
Q 013328          266 VDFIWLLNPNKYRKLLKASWSEAVFGMFKCLL-R-----------RAS-L-TETDAFAFLKADNDGDYITYSGF---CEA  328 (445)
Q Consensus       266 IDyi~~~~~~~~~~~~~~s~~~~v~~~~~~~~-~-----------~~~-~-~~~~~F~~~D~~~~~G~i~~~el---~~~  328 (445)
                      .|-.=++.-....++.++.+...++..+...| .           +.. + .+.-.|..+|+|.+ +.|...|.   +.+
T Consensus       283 ~dp~kvR~l~gC~e~KKteFL~~Ll~aL~Tdmv~s~~~as~gr~~e~DeeRvv~w~F~qLdkN~n-n~i~rrEwKpFK~~  361 (421)
T KOG4578|consen  283 VDPKKVRRLNGCPEKKKTEFLTSLLDALKTDMVMSGINASNGRKSEPDEERVVHWYFNQLDKNSN-NDIERREWKPFKRV  361 (421)
T ss_pred             cccccccccCCCCcchhhHHHHHHHHHHhhhhhhhcccccCCcccCCChhheeeeeeeeeccccc-CccchhhcchHHHH
Confidence            44444555555566666666666666665554 0           011 1 34446999999999 99999995   555


Q ss_pred             HHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          329 LEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       329 l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      |..-.       -...-.+++++..|.|+|-+|+++|+...|
T Consensus       362 l~k~s-------~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL  396 (421)
T KOG4578|consen  362 LLKKS-------KPRKCSRKFFKYCDLNKDKKISLDEWRGCL  396 (421)
T ss_pred             HHhhc-------cHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence            55432       335567899999999999999999998655

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=89.90  E-value=1  Score=44.53  Aligned_cols=66  Identities=11%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH-------hccCCCCCCCC-HHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTGHKHGLA-DEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-------~g~~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      +.....++=+|+.+|.+++ |.|+..||+.....       +|    ...++ ++-+.+|+..+.....++|+.++|+.
T Consensus       347 k~t~~SleYwFrclDld~~-G~Lt~~el~~fyeeq~~rm~~~~----~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~  420 (493)
T KOG2562|consen  347 KDTPASLEYWFRCLDLDGD-GILTLNELRYFYEEQLQRMECMG----QEALPFEDALCQIRDMVKPEDENKITLQDLKG  420 (493)
T ss_pred             CCCccchhhheeeeeccCC-CcccHHHHHHHHHHHHHHHHhcC----CCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence            6666788889999999999 99999999766543       23    12222 44456777777777789999999974

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=89.54  E-value=0.18  Score=49.18  Aligned_cols=51  Identities=27%  Similarity=0.506  Sum_probs=43.2

Q ss_pred             ccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          310 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       310 ~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      .+|.+.+ |-||..|..-++.-|.       .++....-.|+.||.||||.||.+||..
T Consensus       207 F~~lg~~-GLIsfSdYiFLlTlLS-------~p~~~F~IAFKMFD~dgnG~IdkeEF~~  257 (489)
T KOG2643|consen  207 FYKLGES-GLISFSDYIFLLTLLS-------IPERNFRIAFKMFDLDGNGEIDKEEFET  257 (489)
T ss_pred             EEEcCCC-CeeeHHHHHHHHHHHc-------cCcccceeeeeeeecCCCCcccHHHHHH
Confidence            3466778 9999999999998877       5566677789999999999999999974

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=89.02  E-value=0.39  Score=44.99  Aligned_cols=65  Identities=11%  Similarity=0.035  Sum_probs=53.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....|+-+|+.|+.+.| |.+...+|.-+|+. +|       ...=.+-.++...+...+|+|.|++|.+.+..
T Consensus       294 t~~iiq~afk~f~v~eD-g~~ge~~ls~ilq~~lg-------v~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~  359 (412)
T KOG4666|consen  294 TPVIIQYAFKRFSVAED-GISGEHILSLILQVVLG-------VEVLRVPVLFPSIEQKDDPKIYASNFRKFAAT  359 (412)
T ss_pred             cHHHHHHHHHhcccccc-cccchHHHHHHHHHhcC-------cceeeccccchhhhcccCcceeHHHHHHHHHh
Confidence            34567778999999999 99999999988876 45       33445678899999999999999999876654

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=88.74  E-value=0.76  Score=45.49  Aligned_cols=66  Identities=20%  Similarity=0.315  Sum_probs=57.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++.+.+-+-|+.+-.|-. |.|+-.--+..+.+-.       ++-.|+..|..-.|.|.||-+++.||+..+.
T Consensus       227 ~EQReYYvnQFrtvQpDp~-gfisGsaAknFFtKSk-------lpi~ELshIWeLsD~d~DGALtL~EFcAAfH  292 (737)
T KOG1955|consen  227 PEQREYYVNQFRTVQPDPH-GFISGSAAKNFFTKSK-------LPIEELSHIWELSDVDRDGALTLSEFCAAFH  292 (737)
T ss_pred             HHHHHHHHhhhhcccCCcc-cccccHHHHhhhhhcc-------CchHHHHHHHhhcccCccccccHHHHHhhHh
Confidence            3455667778999999999 9999999999998854       7788999999999999999999999997763

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=88.03  E-value=0.48  Score=36.60  Aligned_cols=33  Identities=12%  Similarity=0.277  Sum_probs=29.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++++.+|.|++ |.|+.+||..++..+.
T Consensus        51 ~~~~v~~i~~elD~n~d-G~Idf~EF~~l~~~l~   83 (93)
T cd05026          51 DPMLVDKIMNDLDSNKD-NEVDFNEFVVLVAALT   83 (93)
T ss_pred             CHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHH
Confidence            34579999999999999 9999999999988764

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=87.07  E-value=0.61  Score=35.71  Aligned_cols=32  Identities=13%  Similarity=0.177  Sum_probs=28.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ..++.++++.+|.|+| |.|+.+||..++..+.
T Consensus        51 ~~~~~~ll~~~D~d~D-G~I~f~EF~~l~~~l~   82 (89)
T cd05023          51 PGVLDRMMKKLDLNSD-GQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHHH
Confidence            4678999999999999 9999999999887764

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]

Probab=86.88  E-value=0.69  Score=43.74  Aligned_cols=64  Identities=16%  Similarity=0.091  Sum_probs=52.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++.-+|..+|.|.| |.++..||+.+-  ++       -.+.-|+-+|...|...||.|+-+|+..-++.
T Consensus       247 ~CKds~gWMFnklD~N~D-l~Ld~sEl~~I~--ld-------knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k  310 (434)
T KOG3555|consen  247 ICKDSLGWMFNKLDTNYD-LLLDQSELRAIE--LD-------KNEACIKPFFNSCDTYKDGSISTNEWCYCFQK  310 (434)
T ss_pred             chhhhhhhhhhccccccc-cccCHHHhhhhh--cc-------CchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence            344567788999999999 999999998763  22       44677899999999999999999999965544

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=86.48  E-value=1.4  Score=33.66  Aligned_cols=32  Identities=13%  Similarity=0.244  Sum_probs=28.6

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ..++..+|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 ~~~v~~i~~~~D~d~d-G~I~f~eF~~~~~~~~   81 (88)
T cd05030          50 QKAIDKIFEDLDTNQD-GQLSFEEFLVLVIKVG   81 (88)
T ss_pred             HHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHHH
Confidence            5779999999999999 9999999999887754

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=86.08  E-value=1.6  Score=29.30  Aligned_cols=33  Identities=12%  Similarity=0.052  Sum_probs=26.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      .....+..+|+..|++++ |.+..+|+....+.|
T Consensus        18 ~~~~yA~~LFq~~D~s~~-g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen   18 MDDEYARQLFQECDKSQS-GRLEGEEFEEFYKRL   50 (51)
T ss_dssp             --HHHHHHHHHHH-SSSS-SEBEHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhcccCC-CCccHHHHHHHHHHh
Confidence            344567789999999999 999999999988764

...

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=85.75  E-value=1.6  Score=33.44  Aligned_cols=34  Identities=12%  Similarity=0.178  Sum_probs=29.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .....+.++|+.+|.|+| |.|+..|+-.++..+.
T Consensus        45 ~d~~~vd~im~~LD~n~D-g~vdF~EF~~Lv~~l~   78 (91)
T cd05024          45 NDPMAVDKIMKDLDDCRD-GKVGFQSFFSLIAGLL   78 (91)
T ss_pred             CCHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            455789999999999999 9999999998887764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=85.72  E-value=0.77  Score=35.04  Aligned_cols=34  Identities=12%  Similarity=0.182  Sum_probs=29.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....++.++|+.+|.|++ |.|+.+||-..+..+.
T Consensus        48 ~t~~ev~~m~~~~D~d~d-G~Idf~EFv~lm~~l~   81 (88)
T cd05029          48 LQDAEIAKLMEDLDRNKD-QEVNFQEYVTFLGALA   81 (88)
T ss_pred             CCHHHHHHHHHHhcCCCC-CCCcHHHHHHHHHHHH
Confidence            355789999999999999 9999999998887764

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=85.48  E-value=1.1  Score=40.28  Aligned_cols=58  Identities=19%  Similarity=0.365  Sum_probs=49.4

Q ss_pred             cccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          309 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       309 ~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+|.|.| |.++.+||...+--++     ...+-.++..+|..-|.|++.+++.+|.++.-|-
T Consensus       288 ElIDsNhD-GivTaeELe~y~dP~n-----~~~alne~~~~ma~~d~n~~~~Ls~eell~r~~~  345 (362)
T KOG4251|consen  288 ELIDSNHD-GIVTAEELEDYVDPQN-----FRLALNEVNDIMALTDANNDEKLSLEELLERDWL  345 (362)
T ss_pred             HHhhcCCc-cceeHHHHHhhcCchh-----hhhhHHHHHHHHhhhccCCCcccCHHHHHHHHhh
Confidence            45799999 9999999999876666     4466778999999999999999999999876554

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.41  E-value=2  Score=45.07  Aligned_cols=57  Identities=21%  Similarity=0.307  Sum_probs=45.7

Q ss_pred             Hhccccc--cCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          306 DAFAFLK--ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       306 ~~F~~~D--~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +-|+.|+  +-+. |+|+-..-+.++..-|       ++..-+-+|..-.|.|.||++|..||.-.|
T Consensus        17 K~~~qF~~Lkp~~-gfitg~qArnfflqS~-------LP~~VLaqIWALsDldkDGrmdi~EfSIAm   75 (1118)
T KOG1029|consen   17 KHDAQFGQLKPGQ-GFITGDQARNFFLQSG-------LPTPVLAQIWALSDLDKDGRMDIREFSIAM   75 (1118)
T ss_pred             HHHHHHhccCCCC-CccchHhhhhhHHhcC-------CChHHHHHHHHhhhcCccccchHHHHHHHH
Confidence            3344444  3566 9999999999998877       667788999999999999999999996333

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=85.40  E-value=0.83  Score=45.19  Aligned_cols=51  Identities=14%  Similarity=0.145  Sum_probs=39.9

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccCccccccccCCcccccccc
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (445)
                      ......+++.+|+.+|.|+||.|+.+||+.   ...++...|.+.+|.++..|.
T Consensus       329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~---~~~~F~~~D~d~DG~Is~eEf  379 (391)
T PRK12309        329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG---SDAVFDALDLNHDGKITPEEM  379 (391)
T ss_pred             cChhhHHHHHHHHHhCCCCCCcCcHHHHHH---HHHHHHHhCCCCCCCCcHHHH
Confidence            456678899999999999999999999973   234566667777777776653

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=84.11  E-value=1  Score=30.64  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=22.1

Q ss_pred             HHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          346 TKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       346 ~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +..++..+|.+++|.|+++||...+
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l   26 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAAL   26 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            5778999999999999999998655

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>smart00027 EH Eps15 homology domain

Probab=83.97  E-value=1.5  Score=33.89  Aligned_cols=29  Identities=14%  Similarity=0.232  Sum_probs=24.1

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .+++.+|..+|.|++|.|+++|+.+.+..
T Consensus        10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~   38 (96)
T smart00027       10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK   38 (96)
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            34677889999999999999999876643

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=82.67  E-value=0.66  Score=35.84  Aligned_cols=33  Identities=12%  Similarity=0.277  Sum_probs=29.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.+++ |.|+.+||..++..++
T Consensus        49 s~~ei~~~~~~~D~~~d-g~I~f~eF~~l~~~~~   81 (94)
T cd05031          49 DPMAVDKIMKDLDQNRD-GKVNFEEFVSLVAGLS   81 (94)
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            44678899999999999 9999999999998877

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=82.52  E-value=1  Score=36.36  Aligned_cols=28  Identities=18%  Similarity=0.272  Sum_probs=24.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEAL  329 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l  329 (445)
                      ...+...|+.+|.|+| |.||.+|+..+|
T Consensus        79 e~~~~~f~~~~D~n~D-g~IS~~Ef~~cl  106 (116)
T cd00252          79 EHCIKPFFESCDLDKD-GSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHHCCCCC-CCCCHHHHHHHH
Confidence            3446778999999999 999999999998

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=82.00  E-value=2.6  Score=32.13  Aligned_cols=33  Identities=12%  Similarity=0.190  Sum_probs=28.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++++.+|.|++ |.|+.+||..++..+.
T Consensus        49 ~~~~v~~~i~~~D~n~d-G~v~f~eF~~li~~~~   81 (88)
T cd05027          49 EQEVVDKVMETLDSDGD-GECDFQEFMAFVAMVT   81 (88)
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34669999999999999 9999999998887654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=81.61  E-value=1.9  Score=45.31  Aligned_cols=63  Identities=17%  Similarity=0.285  Sum_probs=55.4

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .-+..+|+..|++++ |.++..+...+++.+.     ..+....+..++++.|..+++++..++|++.-
T Consensus       136 ~wi~~~~~~ad~~~~-~~~~~~~~~~~~~~~n-----~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~  198 (746)
T KOG0169|consen  136 HWIHSIFQEADKNKN-GHMSFDEVLDLLKQLN-----VQLSESKARRLFKESDNSQTGKLEEEEFVKFR  198 (746)
T ss_pred             HHHHHHHHHHccccc-cccchhhHHHHHHHHH-----HhhhHHHHHHHHHHHHhhccceehHHHHHHHH
Confidence            346667999999999 9999999999999988     66888889999999999999999999998544

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=81.15  E-value=1.5  Score=33.69  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=28.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 s~~~v~~i~~~~D~d~~-G~I~f~eF~~l~~~~~   82 (92)
T cd05025          50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAALT   82 (92)
T ss_pred             CHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHH
Confidence            34678999999999999 9999999999887764

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	445
4b8c_D	727	Nuclease Module Of The Yeast Ccr4-Not Complex Lengt		6e-05

>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex Length = 727

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLART------- 111
           W  R  ++ + +L   S ++CLQE  V ++   + +   L   GY     A+        
Sbjct: 423 WDYRRNKLKEQILSYDSDLLCLQE--VESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHS 480
Query: 112 --NNRGDGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRVAQLLHVELIDPF 156
             + + DG      +D F+++    + F+             D+ +R     +V L    
Sbjct: 481 KDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKL 540
Query: 157 SQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE---HN----LKP 209
               +GD    I  V THL +  D   + V+  QV  +L H+E+  KE   HN    +K 
Sbjct: 541 QHIPSGD---TIWAVTTHLHW--DPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKK 595
Query: 210 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNIC 264
            P+++CGD+N      VY+ + + G V      HQ  +     ++S +N   N+ 
Sbjct: 596 FPVLICGDFNSYINSAVYELINT-GRVQ----IHQEGNGRDFGYMSEKNFSHNLA 645

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	445
3ngq_A	398	CCR4-NOT transcription complex subunit 6-like; alp	9e-26
3mpr_A	298	Putative endonuclease/exonuclease/phosphatase FAM	2e-17
3g6s_A	267	Putative endonuclease/exonuclease/phosphatase fami	8e-15
3l1w_A	257	Uncharacterized protein; APC29019.2, conserved pro	3e-11
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-10
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-10
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	7e-10
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	3e-09
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	7e-09
3i41_A	317	Beta-hemolysin; beta toxin, sphingomyelinase, toxi	7e-09
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	8e-09
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	1e-08
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	1e-08
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-08
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	6e-08
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	9e-08
3li6_A	66	Calcium-binding protein; calcium signaling protein	9e-08
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	1e-07
1zwx_A	301	SMCL, sphingomyelinase-C; dnase1-like fold, beta-h	2e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	2e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	4e-04
2ddr_A	306	Sphingomyelin phosphodiesterase; DNAse I like fold	3e-07
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	3e-07
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	3e-07
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	4e-07
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	4e-07
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	6e-07
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	7e-07
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	7e-05
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	8e-07
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	5e-05
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-06
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	7e-06
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	1e-06
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	1e-06
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	1e-06
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-06
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-06
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	2e-06
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	2e-06
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	3e-04
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	2e-06
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-05
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	3e-06
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	3e-06
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	3e-06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	3e-06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	2e-05
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	3e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	8e-05
3teb_A	266	Endonuclease/exonuclease/phosphatase; PSI-biology,	4e-06
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	5e-06
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-06
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-04
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	5e-06
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	4e-05
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	5e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-06
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	7e-06
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	7e-06
2jnf_A	158	Troponin C; stretch activated muscle contraction,	7e-06
2jnf_A	158	Troponin C; stretch activated muscle contraction,	3e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	8e-06
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	6e-05
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	9e-06
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-04
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	1e-05
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	1e-05
2hps_A	186	Coelenterazine-binding protein with bound coelent;	1e-05
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-05
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	1e-05
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	1e-05
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	2e-05
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	1e-05
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-05
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	1e-05
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-05
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	2e-05
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-05
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	5e-05
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	2e-05
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	2e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	2e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	6e-05
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-05
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	8e-04
3fwb_A	161	Cell division control protein 31; gene gating, com	2e-05
3fwb_A	161	Cell division control protein 31; gene gating, com	2e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	2e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	4e-04
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-05
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-05
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	7e-04
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	8e-04
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	3e-05
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	3e-05
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	5e-05
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	7e-05
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	6e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-05
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	7e-05
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	9e-05
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-04
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-04
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	7e-04
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	1e-04
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	1e-04
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	2e-04
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	1e-04
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	3e-04
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	4e-04
1y1x_A	191	Leishmania major homolog of programmed cell death	5e-04
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	8e-04
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	9e-04
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	9e-04
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	9e-04

>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Length = 398

 Score =  107 bits (267), Expect = 9e-26
 Identities = 52/308 (16%), Positives = 104/308 (33%), Gaps = 46/308 (14%)

Query: 25  QQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFW 84
                 T   +N+L   Y          S     W  R + I++ ++   + II LQE  
Sbjct: 27  LPSASFTVMCYNVLCDKYATRQLYGYCPSWALN-WEYRKKGIMEEIVNCDADIISLQE-- 83

Query: 85  VGNEELVDMYEKRLSDAGYVNFKLART---------NNRGDGLLTAVHKDYFRVVNYRDL 135
           V  E+   ++   L + GY  F   ++             DG       + F +V    +
Sbjct: 84  VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV 143

Query: 136 LFNDFGDR---------------------VAQLLHVELIDPFSQCRNGDLRQEILIVNTH 174
            FN                          V   +H EL     +  +   +Q +++ N H
Sbjct: 144 EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAH 203

Query: 175 LLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP---------IPIILCGDWNGSKRGH 225
           + +  D   S V+L Q    +  V++  ++ + +P         IP++LC D N      
Sbjct: 204 MHW--DPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSG 261

Query: 226 VYKFLRSQGFVSSYD--TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKA 283
           V ++L + G   ++      +Y +   +   + +N            L +  +   +   
Sbjct: 262 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 321

Query: 284 SWSEAVFG 291
           +++    G
Sbjct: 322 NYTFDFKG 329

>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Length = 298

 Score = 81.7 bits (201), Expect = 2e-17
 Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 26/242 (10%)

Query: 34  TFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDM 93
           ++N+        +  +         W  R   I   + Y    I   QE        +  
Sbjct: 11  SYNLRNANGSDSARGDG--------WGQRYPVIAQMVQYHDFDIFGTQE---CFLHQLKD 59

Query: 94  YEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVEL- 152
            ++ L    Y+        ++G+        D F +V   D   ++  D  ++     L 
Sbjct: 60  MKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLP 119

Query: 153 -IDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIP 211
            I  +   +  D   E L  N H+    D      R+   + + + ++   +  NL   P
Sbjct: 120 RICSWGHFKCKDTGFEFLFFNLHM----DHIGKKARVESAFLVQEKMKELGRGKNL---P 172

Query: 212 IILCGDWNGSKRGHVYKFLRSQG-FVSSYDTAHQYTDADA--HKWVSHRNHRGNICGVDF 268
            IL GD+N  +    Y    S+G    SY+        +   + +  +      I   D 
Sbjct: 173 AILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPNSFTESRI---DH 229

Query: 269 IW 270
           I+
Sbjct: 230 IF 231

>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Length = 267

 Score = 73.5 bits (180), Expect = 8e-15
 Identities = 40/244 (16%), Positives = 75/244 (30%), Gaps = 31/244 (12%)

Query: 34  TFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDM 93
           TFNI                D    W  R  R+  ++      I+ +QE           
Sbjct: 8   TFNIR----------YDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQ---FQD 54

Query: 94  YEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELI 153
               L +   +          G+       KD + V++       +  D V  +    + 
Sbjct: 55  LRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVC 114

Query: 154 DPFSQC---RNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPI 210
              +     ++    +  + VNTH     D      R      I++ ++    E      
Sbjct: 115 VRIATWAKFKDKATGKIFMAVNTHF----DHVGEEARRQSALLIIRKIKEIVGER----- 165

Query: 211 PIILCGDWNGSKRGHVYKFLRSQG--FVSSYDTAHQYTDADA--HKWVSHRNHRGNICGV 266
           P ++ GD+N +     Y+ + +       +Y TA + T  D   H +            +
Sbjct: 166 PAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARIPAEDCEK--I 223

Query: 267 DFIW 270
           DFI+
Sbjct: 224 DFIF 227

>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Length = 257

 Score = 62.7 bits (152), Expect = 3e-11
 Identities = 40/242 (16%), Positives = 86/242 (35%), Gaps = 33/242 (13%)

Query: 34  TFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDM 93
           T+N+      R+  E     D    W  R + +   + +   S+ C+QE  V   ++ D+
Sbjct: 5   TYNV------RVDTEY----DQDWQWSFRKEAVCQLINFHDWSLCCIQE--VRPNQVRDL 52

Query: 94  YEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELI 153
             K  +    ++ +    + +G+GL    ++   + ++      ++   + +        
Sbjct: 53  --KAYTTFTCLSAE-REGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCP 109

Query: 154 DPFSQC--RNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIP 211
                   +        L++N HL    D   +  RL  +  IL+ +     ++     P
Sbjct: 110 RIALWGLFKETTQNTPFLVINVHL----DHISAHARLAGMTVILEELHDKIAQY-----P 160

Query: 212 IILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDA---DAHKWVSHRNHRGNICGVDF 268
            +L GD+N      V++ L  + F  S + A  Y          +         I   D+
Sbjct: 161 TLLMGDFNAESGEEVHQ-LVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELEEI---DY 216

Query: 269 IW 270
           I+
Sbjct: 217 IY 218

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F   D D   +I        L+  +       L+ +ETK L    D DG+G +  +EF 
Sbjct: 46  VFHILDKDKSGFIEEDELGSILKGFSSDARD--LSAKETKTLMAAGDKDGDGKIGVEEFS 103

Query: 368 Q 368
            
Sbjct: 104 T 104

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           D F F+  D  G Y+        L++      +  L + ETK L   AD DG+G +   E
Sbjct: 45  DIFRFIDNDQSG-YLDGDELKYFLQKFQSDARE--LTESETKSLMDAADNDGDGKIGADE 101

Query: 366 FQQ 368
           FQ+
Sbjct: 102 FQE 104

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 55.4 bits (134), Expect = 7e-10
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  L  D  G +I        L++         L   ETK     AD DG+G +  +E
Sbjct: 45  EIFRILDNDQSG-FIEEDELKYFLQRFESGARV--LTASETKTFLAAADHDGDGKIGAEE 101

Query: 366 FQQ 368
           FQ+
Sbjct: 102 FQE 104

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 53.7 bits (130), Expect = 3e-09
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 290 FGMFKCLLRRASLTETD---AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET 346
              F  L+   +++  D    F  + AD  G +I        L+     G    L D ET
Sbjct: 27  HKKFFALVGLKAMSANDVKKVFKAIDADASG-FIEEEELKFVLKSFAADGRD--LTDAET 83

Query: 347 KDLWVQADIDGNGVVDYKEFQQ 368
           K     AD DG+G +   EF+ 
Sbjct: 84  KAFLKAADKDGDGKIGIDEFET 105

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 52.5 bits (126), Expect = 7e-09
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            F   D      I+   F     +         L DE+   LW +  ++  G + Y +F
Sbjct: 29  EFENFDTMKTNTISREEFRAICNRRVQI-----LTDEQFDRLWNEMPVNAKGRLKYPDF 82

>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Length = 317

 Score = 55.9 bits (134), Expect = 7e-09
 Identities = 29/263 (11%), Positives = 68/263 (25%), Gaps = 41/263 (15%)

Query: 34  TFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDM 93
           + N+         N    +         R   I      + + ++   E +  +    D 
Sbjct: 34  SHNVYMLSTVLYPNWGQYK---------RADLIGQSSYIKNNDVVIFNEAF--DNGASDK 82

Query: 94  YEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELI 153
               +    Y         ++     T          +    + + +      +      
Sbjct: 83  LLSNVKK-EYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKY-----PIKEKIQH 136

Query: 154 DPFSQCRNGDLR--------------QEILIVNTHLLFPH----DSSLSLVRLHQVYKIL 195
             F      D                + + ++ TH               +R  Q+ +I 
Sbjct: 137 -VFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEIS 195

Query: 196 QHVESYQKEHNLKPIPIILCGDWNGSKRGHVYK-FLRSQGFVSSYDTAHQYT-DADAHKW 253
             V+      +     + + GD N +K    +K  L++          H  T D  ++  
Sbjct: 196 DFVKKKNIPKD---ETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSI 252

Query: 254 VSHRNHRGNICGVDFIWLLNPNK 276
             +    G    +D+I+    +K
Sbjct: 253 AKYNYPNGKPEHLDYIFTDKDHK 275

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 52.2 bits (126), Expect = 8e-09
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF  +  D  G +I        L+  + +     L D ETK      D DG+G++   E
Sbjct: 45  KAFYVIDQDKSG-FIEEDELKLFLQNFSPSARA--LTDAETKAFLADGDKDGDGMIGVDE 101

Query: 366 FQQ 368
           F  
Sbjct: 102 FAA 104

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
           AF   D D   +I        L+  +       L D ETK      D DG+G +   E+ 
Sbjct: 47  AFFVIDQDKSGFIEEDELKLFLQVFSAGARA--LTDAETKAFLKAGDSDGDGAIGVDEWA 104

Query: 368 Q 368
            
Sbjct: 105 A 105

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  L  D  G +I        L+  +  G    L D ETK L    D D +G +   E
Sbjct: 45  EVFEILDKDQSG-FIEEEELKGVLKGFSAHGRD--LNDTETKALLAAGDSDHDGKIGADE 101

Query: 366 FQQ 368
           F +
Sbjct: 102 FAK 104

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  +  DN G  IT+    + L+++   G +  L + E KDL   ADID +G +DY E
Sbjct: 27  ELFKMIDTDNSG-TITFDELKDGLKRV---GSE--LMESEIKDLMDAADIDKSGTIDYGE 80

Query: 366 F 366
           F
Sbjct: 81  F 81

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F  L  D  G +I        L+  + +     L   ETK      D DG+G +  +E
Sbjct: 46  KVFGILDQDKSG-FIEEEELQLFLKNFSSSAR--VLTSAETKAFLAAGDTDGDGKIGVEE 102

Query: 366 FQQ 368
           FQ 
Sbjct: 103 FQS 105

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            F   D +    +    F     +L +          + + ++ + D D +G + ++EF
Sbjct: 32  VFAACDANRSGRLEREEFRALCTELRVR-------PADAEAVFQRLDADRDGAITFQEF 83

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F + D +GD  ++Y      + +           ++  + ++   D DGNG +D  EF 
Sbjct: 5   LFKEIDVNGDGAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFA 59

Query: 368 Q 368
           +
Sbjct: 60  K 60

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            F K D + D  ++   F E                E+    + + D+DGNG ++  EF
Sbjct: 6   VFEKFDKNKDGKLSLDEFREVALAF---SPY--FTQEDIVKFFEEIDVDGNGELNADEF 59

>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Length = 301

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 29/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 62  RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 121
           R   I      + + ++ L E +  +          L +  Y +       ++     T 
Sbjct: 34  RADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLREM-YPHQTPVIGRSKHGWDKTE 90

Query: 122 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR--------------QE 167
            +   F + +    + + +      ++       F +    D                + 
Sbjct: 91  GNYSNFALEDGGVAVVSQW-----PIVEKSQH-IFQRGGGADRLSNKGFAYVKIMKNGKP 144

Query: 168 ILIVNTHLLFPHDSSL----SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR 223
             I+ TH               +R  Q+ +I   +       +     I + GD N +  
Sbjct: 145 YHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPKDE---IIFIGGDLNVNYG 201

Query: 224 GHVYKFLRSQGFVSSYD--TAHQYT-DADAHKWVSHRNHRGNICGVDFIWLLNPNK 276
              Y  +     VSS         T D   +  +     +     +D+I++ N + 
Sbjct: 202 TDEYHDMLKLLNVSSPANFNGQMATWDPTTNSMLKESYPKAAPEYLDYIFVENGHA 257

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 12/90 (13%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F + D DG   +    F + L +L L      L   E + +  + D +G+G +D +EF 
Sbjct: 42  FFRQLDRDGSRSLDADEFRQGLAKLGLV-----LDQAEAEGVCRKWDRNGSGTLDLEEFL 96

Query: 368 QRIWKTTWSDQRNDLN------DEDEDGFV 391
           + +       +   +       D   DG V
Sbjct: 97  RALRPPMSQAREAVIAAAFAKLDRSGDGVV 126

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 4/66 (6%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHG--LADEETKDLWVQADI-DGNGVVD 362
            AFA L    DG  +T                + G    DE  +      D  + +G V 
Sbjct: 113 AAFAKLDRSGDG-VVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVT 171

Query: 363 YKEFQQ 368
             EFQ 
Sbjct: 172 LAEFQD 177

>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Length = 306

 Score = 51.3 bits (122), Expect = 3e-07
 Identities = 39/273 (14%), Positives = 78/273 (28%), Gaps = 54/273 (19%)

Query: 34  TFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDM 93
           T N+         N    E         R   I      +   ++ L E +  N     +
Sbjct: 14  THNVYMLSTNLYPNWGQTE---------RADLIGAADYIKNQDVVILNEVF-DNSASDRL 63

Query: 94  YEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELI 153
                 +       L R++                + NY      D G  VA +    + 
Sbjct: 64  LGNLKKEYPNQTAVLGRSSGSE---------WDKTLGNYSSSTPEDGG--VAIVSKWPIA 112

Query: 154 D----PFSQCRNGDLR--------------QEILIVNTHL----LFPHDSSLSLVRLHQV 191
           +     F++    D                + + ++ THL         +S + VR +Q+
Sbjct: 113 EKIQYVFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQL 172

Query: 192 YKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS-QGFVSSYD------TAHQ 244
            +I   +++    +N     +++ GD N +K                + +      T H 
Sbjct: 173 KEIQDFIKNKNIPNN---EYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHT 229

Query: 245 YT-DADAHKWVSHRNHRGNICGVDFIWLLNPNK 276
            T DA  +    +         +D+I     + 
Sbjct: 230 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHA 262

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            +++ D +G+  I        LE+L   G        E K L  +          Y +F 
Sbjct: 53  KYMEFDLNGNGDIDIMSLKRMLEKL---GVP--KTHLELKRLIREVSSGSEETFSYSDFL 107

Query: 368 QRIWK 372
           + +  
Sbjct: 108 RMMLG 112

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D +G YI+ S     +  L   G K  L DEE + +  +AD+DG+G V+Y+E
Sbjct: 13  EAFKVFDKDQNG-YISASELRHVMINL---GEK--LTDEEVEQMIKEADLDGDGQVNYEE 66

Query: 366 FQQRIWKTTWSDQRNDLNDEDE 387
           F + +            N    
Sbjct: 67  FVKMMMTV---RGGGGGNGWSR 85

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 14/84 (16%)

Query: 290 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
           F +F  +     L   D       AF  L  D  G  I  S   E L      G +    
Sbjct: 77  FTVFLTMFGE-KLKGADPEDVIMGAFKVLDPDGKG-SIKKSFLEELLTTG---GGR--FT 129

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
            EE K++W     D  G VDYK  
Sbjct: 130 PEEIKNMWAAFPPDVAGNVDYKNI 153

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 11/93 (11%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F  + A  +   +    F  A+ +L       G   E+   L+ + D +G G V + E
Sbjct: 134 VMFDEIDASGNM-LVDEEEFKRAVPKLEA----WGAKVEDPAALFKELDKNGTGSVTFDE 188

Query: 366 FQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQT 398
           F        W+       D D D   +S+LE  
Sbjct: 189 F------AAWASAVKLDADGDPDNVPESALEHH 215

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 47.9 bits (115), Expect = 6e-07
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 14/84 (16%)

Query: 290 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
           F MF  +     L  TD       AFA    +  G +I      E L  +   G +    
Sbjct: 58  FTMFLTMFGE-KLNGTDPEDVIRNAFACFDEEASG-FIHEDHLRELLTTM---GDR--FT 110

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
           DEE  +++ +A ID  G  +Y EF
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEF 134

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            F K D + +  +++      L  +       G+   +   +    DI+  G + Y EF
Sbjct: 44  LFYKLDTNHNGSLSHREIYTVLASV-------GIKKWDINRILQALDINDRGNITYTEF 95

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 16/71 (22%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV----- 360
            AF  +  D DG YI+ S     +    L        + +  + ++       G+     
Sbjct: 112 AAFNKIDKDEDG-YISKSDIVSLVHDKVLD-------NNDIDNFFLSVHSIKKGIPREHI 163

Query: 361 ---VDYKEFQQ 368
              + ++EF+ 
Sbjct: 164 INKISFQEFKD 174

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     DNDG  IT +     L   N  G+         K +    D + +G +D+ E
Sbjct: 126 CAFRVFDVDNDG-EITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHE 184

Query: 366 FQQ 368
           F +
Sbjct: 185 FSE 187

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 7/61 (11%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F  L  D  G YIT     + LE+    G K          L  Q D DG+G +DY E
Sbjct: 56  STFLVLDEDGKG-YITKEQLKKGLEKD---GLK---LPYNFDLLLDQIDSDGSGKIDYTE 108

Query: 366 F 366
           F
Sbjct: 109 F 109

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F  +  + DG  ++Y      + +           ++  + ++   D DGNG +D  E
Sbjct: 4   ALFKEIDVNGDG-AVSYEEVKAFVSKK---RAI--KNEQLLQLIFKSIDADGNGEIDQNE 57

Query: 366 F---QQRIWKTTWSDQRNDLN------DEDEDGF 390
           F      I     SD +  L       D D DG 
Sbjct: 58  FAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGK 91

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 44.4 bits (106), Expect = 7e-06
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 10/63 (15%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             +  +  D DG  +T        ++            E+  +  ++AD +G+G +  +E
Sbjct: 79  VLYKLMDVDGDG-KLTKEEVTSFFKKHG---------IEKVAEQVMKADANGDGYITLEE 128

Query: 366 FQQ 368
           F +
Sbjct: 129 FLE 131

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 290 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
              FK + R+   T T+       AF  L  + +G  I  +   + L  L   G    L 
Sbjct: 57  LATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNG-TIQEAELRQLLLNL---GDA--LT 110

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
             E ++L  +  + G+G ++Y+ F
Sbjct: 111 SSEVEELMKEVSVSGDGAINYESF 134

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF    A+ DG  I +  F   ++++   G +  L D E ++   +AD DGNGV+D  E
Sbjct: 12  RAFKVFDANGDG-VIDFDEFKFIMQKV---GEE-PLTDAEVEEAMKEADEDGNGVIDIPE 66

Query: 366 F 366
           F
Sbjct: 67  F 67

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     +  G  I Y     A+  L   G    +   E  +L  + D +GNG + + +
Sbjct: 11  EAFDLFDTNKTG-SIDYHELKVAMRAL---GFD--VKKPEILELMNEYDREGNGYIGFDD 64

Query: 366 F 366
           F
Sbjct: 65  F 65

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF +   D  G YIT     +A E+  +        D   ++L    D D +G +DY E
Sbjct: 103 AAFTYFDKDGSG-YITPDELQQACEEFGVE-------DVRIEELMRDVDQDNDGRIDYNE 154

Query: 366 FQQ 368
           F  
Sbjct: 155 FVA 157

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  + AD  G  IT+      L+++   G    L + E  DL   AD+D +G +DYKE
Sbjct: 31  EMFNMIDADKSG-QITFEELKAGLKRV---GAN--LKESEILDLMQAADVDNSGTIDYKE 84

Query: 366 FQQRIWKTTWSDQRNDLNDEDE 387
           F         +   N +  ED 
Sbjct: 85  F------IAATLHLNKIEREDH 100

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     D DG +IT      A+  L   G    L  EE   +  +AD+D +G V+Y+E
Sbjct: 10  VAFRAFDQDGDG-HITVDELRRAMAGL---GQP--LPQEELDAMIREADVDQDGRVNYEE 63

Query: 366 F 366
           F
Sbjct: 64  F 64

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 16/96 (16%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D +G YI+ +     +  L   G K  L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 88  EAFRVFDKDGNG-YISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEE 141

Query: 366 F----QQRIWKTTWSDQRNDLN------DEDEDGFV 391
           F      +      + ++  +        +    F 
Sbjct: 142 FVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFS 177

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF+    D DG  IT       +  L   G      + E +D+  + D DGNG +D+ E
Sbjct: 15  EAFSLFDKDGDG-TITTKELGTVMRSL---GQN--PTEAELQDMINEVDADGNGTIDFPE 68

Query: 366 F 366
           F
Sbjct: 69  F 69

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 22/100 (22%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF++   D  G YIT     +A +   L        D    D+  + D D +G +DY E
Sbjct: 86  SAFSYFDKDGSG-YITLDEIQQACKDFGLD-------DIHIDDMIKEIDQDNDGQIDYGE 137

Query: 366 F------QQRIWKTTWSDQRNDLN--------DEDEDGFV 391
           F      ++          R  LN        D   +  +
Sbjct: 138 FAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVI 177

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  +  DN G  IT+    + L+++   G +  L + E KDL   ADID +G +DY E
Sbjct: 14  ELFKMIDTDNSG-TITFDELKDGLKRV---GSE--LMESEIKDLMDAADIDKSGTIDYGE 67

Query: 366 FQQRIWKTTWSDQRNDLN------DEDEDGF 390
           F          ++  +L       D+D  G+
Sbjct: 68  FIAATVHLNKLEREENLVSAFSYFDKDGSGY 98

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + +     + +G  I        LE+L   G        E K L  +          Y +
Sbjct: 36  EKYMEFDLNGNG-DIDIMSLKRMLEKL---GVP--KTHLELKKLIGEVSSGSGETFSYPD 89

Query: 366 F 366
           F
Sbjct: 90  F 90

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 290 FGMFKCLLRRASLTET-----DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADE 344
            G           T++     +AF     D +G YI+ +     +  L   G K  L DE
Sbjct: 12  SGENLYFQSLMKDTDSEEEIREAFRVEDKDGNG-YISAAELRHVMTNL---GEK--LTDE 65

Query: 345 ETKDLWVQADIDGNGVVDYKEFQQ 368
           E  ++  +ADIDG+G V+Y+EF Q
Sbjct: 66  EVDEMIREADIDGDGQVNYEEFVQ 89

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 299 RASLTET------DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 352
           RA L+E        AF    AD  G  I+       +  L   G       EE   +  +
Sbjct: 11  RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRML---GQN--PTKEELDAIIEE 64

Query: 353 ADIDGNGVVDYKEF 366
            D DG+G +D++EF
Sbjct: 65  VDEDGSGTIDFEEF 78

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 8/63 (12%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF    +D  G  IT            +        DE    +  + D + +G VD++E
Sbjct: 127 AAFQQFDSDGSG-KITNEELGRLFGVTEVD-------DETWHQVLQECDKNNDGEVDFEE 178

Query: 366 FQQ 368
           F +
Sbjct: 179 FVE 181

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHK------HGLADEETKDLWVQADIDGNG 359
             F  L  + DG  +      E   +L                + E   +    D D NG
Sbjct: 44  QIFRQLDNNGDG-QLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNG 102

Query: 360 VVDYKEF 366
            ++Y EF
Sbjct: 103 YIEYSEF 109

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 290 FGMFKCLLRRASLTETDAFA-FLKA-----DNDGDYITYSGFCEALEQLNLTGHKHGLAD 343
           F MF  +     +  TD     + A     + DG          +L      G K   + 
Sbjct: 108 FTMFLTIFGD-RIAGTDEEDVIVNAFNLFDEGDG-KCKEETLKRSLTTW---GEK--FSQ 160

Query: 344 EETKDLWVQADIDGNGVVDYKEF 366
           +E      +A IDGNG++D K+F
Sbjct: 161 DEVDQALSEAPIDGNGLIDIKKF 183

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 8/62 (12%)

Query: 308 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
                 D + D  I    F   L  L       G++  E  + + Q D +GNG +   E 
Sbjct: 106 GIVGMCDKNADGQINADEFAAWLTAL-------GMSKAEAAEAFNQVDTNGNGELSLDEL 158

Query: 367 QQ 368
             
Sbjct: 159 LT 160

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 9/102 (8%), Positives = 29/102 (28%), Gaps = 18/102 (17%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-----------WVQAD 354
             F     D +G  +  + F +  + +            E + L             +A 
Sbjct: 11  KRFDRWDFDGNG-ALERADFEKEAQHI-AEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG 68

Query: 355 IDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLE 396
           +  +G +  ++F          +   +  +   +  +   ++
Sbjct: 69  VGSDGSLTEEQF-----IRVTENLIFEQGEASFNRVLGPVVK 105

>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Length = 266

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 35/245 (14%), Positives = 72/245 (29%), Gaps = 55/245 (22%)

Query: 58  YWFGRNQR-----ILDWLLYERSSIICLQEFWVGNEELVDMYE-----------KRLSDA 101
            W   NQ      +   +  ++  +I +QE        +   +           + L   
Sbjct: 13  AWLEENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVLLETLQKY 72

Query: 102 GYVNFKLARTNNR--------GDGLLT---AVHKDYFRVVNYRDLLFNDFGDRVAQLLHV 150
              ++ L  +N+         G  ++T      +D F     +         R    + +
Sbjct: 73  TDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQS--VRTISARRI--VSI 128

Query: 151 ELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPI 210
            +             Q+I   + H+  P+  +        +  IL   ++          
Sbjct: 129 TINYE---------GQDIEFYSCHMNLPNCETED--MGKNIQTILNRTQNSN-------- 169

Query: 211 PIILCGDWNGS--KRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICG--V 266
             IL GD+N         Y+ + SQG   +Y  A +  D       S      +     +
Sbjct: 170 LKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEK-KDDGITVDKSIHGWDNDKAKKRL 228

Query: 267 DFIWL 271
           D+I+ 
Sbjct: 229 DYIFS 233

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
             F     + DG  I+ S   +AL+ L ++T        +E + +  + D DG+G + + 
Sbjct: 15  RIFKRFDTNGDG-KISSSELGDALKTLGSVT-------PDEVRRMMAEIDTDGDGFISFD 66

Query: 365 EF 366
           EF
Sbjct: 67  EF 68

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 11/89 (12%)

Query: 309 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
            F+     G   T   F   L    L    +  A++    ++   D + +G VD+ EF  
Sbjct: 27  TFMMEYPSG-LQTLHEFKTLLGLQGL----NQKANKHIDQVYNTFDTNKDGFVDFLEFIA 81

Query: 369 RIWKTTWSDQRNDLN------DEDEDGFV 391
            +           L       D D +G +
Sbjct: 82  AVNLIMQEKMEQKLKWYFKLYDADGNGSI 110

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 296 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEE-TKDLWVQA 353
           L+ +  + +   + F   D DG+  I  +   +    +     +  L+ EE    ++ + 
Sbjct: 85  LIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKI 144

Query: 354 DIDGNGVVDYKEFQQ 368
           DI+ +G +  +EF  
Sbjct: 145 DINNDGELTLEEFIN 159

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.8 bits (114), Expect = 5e-06
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 18/136 (13%)

Query: 241 TAHQYTDADAHKWV------SHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 294
           +A Q   A  H W+                      +      +KL +A    A+  M  
Sbjct: 285 SAQQ---ALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQA----ALLYMAS 337

Query: 295 CLLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLN---LTGHKHGLADEETKDLW 350
            L  +    E TD F  +  + DG  +      +   +L+   +        + E   + 
Sbjct: 338 KLTSQEETKELTDIFRHIDKNGDG-QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396

Query: 351 VQADIDGNGVVDYKEF 366
             AD D NG +DY EF
Sbjct: 397 GAADFDRNGYIDYSEF 412

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 295 CLLRRASLTET---DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV 351
            + R++ L++     AF     D +G  I+                   L  +  K++  
Sbjct: 416 AMDRKSLLSKDKLESAFQKFDQDGNG-KISVDELASVFGL-------DHLESKTWKEMIS 467

Query: 352 QADIDGNGVVDYKEFQQ 368
             D + +G VD++EF +
Sbjct: 468 GIDSNNDGDVDFEEFCK 484

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 45.5 bits (108), Expect = 5e-06
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 13/91 (14%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDAFAFLKA-----DNDGD-YITYSGFCEALEQLNLTGH 337
           +  E V G  K L  +       A  FL A     D DGD  +T +    AL        
Sbjct: 73  TREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF----- 127

Query: 338 KHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
             G+ ++  +      D DG+G V   E   
Sbjct: 128 --GVPEDLARQAAAALDTDGDGKVGETEIVP 156

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 26/109 (23%)

Query: 307 AFAFLKADNDGDYITYSGFCEALEQLNLTGHK----------HGLADEETKDLWVQADID 356
            F     D +G +I  S F  A + +                +G A+   + L   AD D
Sbjct: 9   RFTTFDQDGNG-HIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRD 67

Query: 357 GNGVVDYKEFQQRIWKTTWSDQRNDLN--------------DEDEDGFV 391
           G+  +  +EF          D+ +                 D D DG V
Sbjct: 68  GDQRITREEFVT-GAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAV 115

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            +++ D + +  I        +E+L   G        E K +  +     +  + Y++F
Sbjct: 55  KYMEFDLNNEGEIDLMSLKRMMEKL---GVP--KTHLEMKKMISEVTGGVSDTISYRDF 108

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 27/179 (15%)

Query: 241 TAHQYTDADAHKWVSHRNHRGNICGVDFIW-----LLNPNKYRKLLKASWSEAVFGMFKC 295
           +A     A  H+W+           V  +      +      +KL +A    A+  M   
Sbjct: 275 SARD---ALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQA----ALLYMGSK 327

Query: 296 LLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHK------HGLADEETKD 348
           L  +    E T  F  +  + DG  +  +   E  ++L     +          + E   
Sbjct: 328 LTSQDETKELTAIFHKMDKNGDG-QLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386

Query: 349 LWVQADIDGNGVVDYKEF------QQRIWKTTWSDQRNDLNDEDEDGFV-KSSLEQTIG 400
           +    D D NG ++Y EF      ++ +      ++   + D D  G +  + L    G
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 445

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 308 FAFLKADNDGD-YITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF K D +GD Y+T       +  L            E +  L   AD + +G +  +E
Sbjct: 11  AAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70

Query: 366 F 366
           F
Sbjct: 71  F 71

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F     D  G  IT   +    +     G     + E+ +  +   D+D  G +D  E
Sbjct: 117 AVFDIFDKDGSG-TITLDEWKAYGKIS---GIS--PSQEDCEATFRHCDLDNAGDLDVDE 170

Query: 366 FQQ 368
             +
Sbjct: 171 MTR 173

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)

Query: 306 DAFA-FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
            AF  F   +  G  ++       LE L   G +        + L  + D  GNG +D+ 
Sbjct: 17  TAFRDFETPEGSG-RVSTDQIGIILEVL---GIQ--QTKSTIRQLIDEFDPFGNGDIDFD 70

Query: 365 EFQQRIWKTTWSDQRNDLNDEDE 387
            F+  I      ++ N    + E
Sbjct: 71  SFKI-IGARFLGEEVNPEQMQQE 92

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     + +G YI+     E L +L        L+ E+   +  + D DG+G VD++E
Sbjct: 95  EAFRLYDKEGNG-YISTDVMREILAEL---DET--LSSEDLDAMIDEIDADGSGTVDFEE 148

Query: 366 F 366
           F
Sbjct: 149 F 149

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
               +AF   D  G  ++     + LE  ++       A ++ +  +   D+D +  + Y
Sbjct: 255 LRILYAFADFDKSG-QLSKEEVQKVLEDAHI----PESARKKFEHQFSVVDVDDSKSLSY 309

Query: 364 KEFQQ 368
           +EF  
Sbjct: 310 QEFVM 314

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 18/89 (20%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            FL +   G    ++    + L +         + +   K L+V  + D  G + Y    
Sbjct: 127 LFLSSAVSGSGKFSFQDLKQVLAKYA-----DTIPEGPLKKLFVMVENDTKGRMSYITLV 181

Query: 368 QRIWKTTWSDQRNDLN------DEDEDGF 390
                   ++    L       D + +G 
Sbjct: 182 ------AVANDLAALVADFRKIDTNSNGT 204

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F  +  +++G  ++   F E   +L                L+  AD D +  V + E
Sbjct: 192 ADFRKIDTNSNG-TLSRKEFREHFVRLGFD------KKSVQDALFRYADEDESDDVGFSE 244

Query: 366 FQQ 368
           +  
Sbjct: 245 YVH 247

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 8/74 (10%)

Query: 296 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD 354
               + +       +   D+DGD  +        ++          +  E     + +AD
Sbjct: 120 RGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF-------DVPQEAAYTFFEKAD 172

Query: 355 IDGNGVVDYKEFQQ 368
            D +G ++  E   
Sbjct: 173 TDKSGKLERTELVH 186

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 11/68 (16%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-------WVQADIDGN 358
             F     D+DG  +         +++          DE+ + +       ++   ++  
Sbjct: 40  KRFDTFDLDSDG-KMEMDEVLYWPDRM---RQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95

Query: 359 GVVDYKEF 366
             +  +++
Sbjct: 96  NGLLREDW 103

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 241 TAHQYTDADAHKWVSHRNHRGN-----ICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKC 295
           TA +   A   +W+    +  N             +      +KL +A    A+  +   
Sbjct: 295 TAEE---ALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQA----AILFIGSK 347

Query: 296 LLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHG---LADEETKDLWV 351
           L       E TD F  L  + DG  +      E    L    ++ G     +EE  ++  
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDG-QLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILK 406

Query: 352 QADIDGNGVVDYKEF 366
           + D D NG ++Y EF
Sbjct: 407 EVDFDKNGYIEYSEF 421

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 10/75 (13%)

Query: 294 KCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA 353
           + L     L    AF     D  G  IT                   ++++   D+  +A
Sbjct: 429 QILFSEERLRR--AFNLFDTDKSG-KITKEELANLFG-------LTSISEKTWNDVLGEA 478

Query: 354 DIDGNGVVDYKEFQQ 368
           D + + ++D+ EF  
Sbjct: 479 DQNKDNMIDFDEFVS 493

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 299 RASLTE------TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 352
           RA L+E        AF    AD  G  I+       +  L   G       EE   +  +
Sbjct: 11  RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRML---GQN--PTKEELDAIIEE 64

Query: 353 ADIDGNGVVDYKEF----QQRIWKTTWSDQRNDLN------DEDEDGF 390
            D DG+G +D++EF     +++ +        +L       D++ DGF
Sbjct: 65  VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF 112

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F     + DG +I      E L      G    + +E+ +DL   +D + +G +D+ E
Sbjct: 100 NCFRIFDKNADG-FIDIEELGEILRAT---GEH--VTEEDIEDLMKDSDKNNDGRIDFDE 153

Query: 366 F 366
           F
Sbjct: 154 F 154

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 18/103 (17%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVV 361
                +    DG +I+   +     ++           EET+     +  Q  +     +
Sbjct: 18  TRMQRVDVTGDG-FISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRI 76

Query: 362 DYKEF-------------QQRIWKTTWSDQRNDLNDEDEDGFV 391
             +E              +++      S    D  D D+DG+V
Sbjct: 77  SVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYV 119

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDA-----FAFLKADNDGD-YITYSGFCEALEQLNLTGH 337
           S  EA       LL+     +  A       +   D D D Y++   F   L+ +     
Sbjct: 77  SVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG---- 132

Query: 338 KHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
              L D++    +   D + NG +   EF  
Sbjct: 133 -PDLTDDKAITCFNTLDFNKNGQISRDEFLV 162

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 12/83 (14%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F   D D +  IT   +    +     G     + E+ ++ +   DID +G +D  E  
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAA---GII--QSSEDCEETFRVCDIDESGQLDVDEM- 167

Query: 368 QRIWKTTWSDQRNDLNDEDEDGF 390
            R     W        D   +  
Sbjct: 168 TRQHLGFWYT-----MDPACEKL 185

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F F   D +G  I+         + ++  +   L D+    L  + D++G+G +D+ E
Sbjct: 133 IPFKFFDIDGNG-KISVEELKRIFGRDDI-ENP--LIDKAIDSLLQEVDLNGDGEIDFHE 188

Query: 366 F 366
           F
Sbjct: 189 F 189

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  L  DN G  ++     + L+++   G++      +   +    D + +G + Y +
Sbjct: 61  NIFIALDVDNSG-TLSSQEILDGLKKI---GYQ--KIPPDIHQVLRDIDSNASGQIHYTD 114

Query: 366 F 366
           F
Sbjct: 115 F 115

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 292 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 349
           +       A+      +AF   D D D  +        +  L   G    L+  E K L 
Sbjct: 117 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLI 176

Query: 350 ---WVQADIDGNGVVDYKEFQQRIWKT 373
                ++DID +G ++  EFQ  I ++
Sbjct: 177 DNILEESDIDRDGTINLSEFQHVISRS 203

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 4/88 (4%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQL--NLTGH-KHGLADEETKDLWVQADIDGNGVVDYK 364
            + K D D   +I        L+ L              E T  +    D + +G ++  
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167

Query: 365 EFQQRIWKTTWSDQRNDLNDEDEDGFVK 392
           E  + +        +          F K
Sbjct: 168 EMARLLPVQENFLLKFQGIKMCGKEFNK 195

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 15/84 (17%)

Query: 290 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
           F MF  +     L+ TD       AFA          +      + LE +   G      
Sbjct: 69  FTMFLSIFSD-KLSGTDSEETIRNAFAMFDEQETK-KLNIEYIKDLLENM---GDN--FN 121

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
            +E +  + +A ++G G  DY +F
Sbjct: 122 KDEMRMTFKEAPVEG-GKFDYVKF 144

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 11/89 (12%)

Query: 309 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
            F+     G  +T   F +     NL       A++  + ++   D + +G +D+ E+  
Sbjct: 22  KFMTECPSG-QLTLYEFKQFFGLKNL----SPSANKYVEQMFETFDFNKDGYIDFMEYVA 76

Query: 369 RIWKTTWSDQRNDLN------DEDEDGFV 391
            +           L       D D +G +
Sbjct: 77  ALSLVLKGKVDQKLRWYFKLYDVDGNGCI 105

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 292 MFKCLLRRASLTET-DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLW 350
           M + +     ++E    F+ L        IT          L +     G++ E+ + + 
Sbjct: 29  MAEKMDVEEFVSELCKGFSLLADPERH-LITAESLRRNSGILGI----EGMSKEDAQGMV 83

Query: 351 VQADIDGNGVVDYKEFQQRIWKTT 374
            + D+DG+G ++  EF   + + +
Sbjct: 84  REGDLDGDGALNQTEFCVLMVRLS 107

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     DN G  IT        ++L   G    L +EE +++  +AD + +  +D  E
Sbjct: 105 KAFRLFDDDNSG-TITIKDLRRVAKEL---GEN--LTEEELQEMIAEADRNDDNEIDEDE 158

Query: 366 FQQRIWKTT 374
           F + + KT+
Sbjct: 159 FIRIMKKTS 167

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 17/96 (17%)

Query: 298 RRASLTET------DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV 351
            R  LTE       +AF     D  G  I       A+  L   G +     EE K +  
Sbjct: 18  GRVGLTEEQKQEIREAFDLFDTDGSG-TIDAKELKVAMRAL---GFE--PKKEEIKKMIS 71

Query: 352 QADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDE 387
           + D DG+G +D++EF   +     + +  + +  +E
Sbjct: 72  EIDKDGSGTIDFEEFLTMM-----TAKMGERDSREE 102

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     ++ G  ++       L  L   G K  L D E  +L    ++D NG +DYK+
Sbjct: 87  KAFQVFDKESTG-KVSVGDLRYMLTGL---GEK--LTDAEVDELLKGVEVDSNGEIDYKK 140

Query: 366 FQQRIWK 372
           F + + +
Sbjct: 141 FIEDVLR 147

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D +G YI+ +     +  L   G K  L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 389 EAFRVFDKDGNG-YISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEE 442

Query: 366 F 366
           F
Sbjct: 443 F 443

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     D  G  I++       ++L   G    L DEE +++  +AD DG+G V  +E
Sbjct: 83  KAFKLFDDDETG-KISFKNLKRVAKEL---GEN--LTDEELQEMIDEADRDGDGEVSEQE 136

Query: 366 F 366
           F
Sbjct: 137 F 137

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 11/82 (13%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF    AD  G  I       A+  L   G +     EE K +  + D +G G +++ +
Sbjct: 10  EAFDLFDADGTG-TIDVKELKVAMRAL---GFE--PKKEEIKKMISEIDKEGTGKMNFGD 63

Query: 366 FQQRIWKTTWSDQRNDLNDEDE 387
           F   +     + + ++ + ++E
Sbjct: 64  FLTVM-----TQKMSEKDTKEE 80

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F     + DG  I+ S   +AL  L   G     + +E + +  + D DG+G +D+ E
Sbjct: 7   RIFKRFDTNGDG-KISLSELTDALRTL---GST---SADEVQRMMAEIDTDGDGFIDFNE 59

Query: 366 F 366
           F
Sbjct: 60  F 60

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 306 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
            AF  F   + D + I+       ++ L   G           ++  + D +G+G V ++
Sbjct: 9   GAFEVFAAKEGDPNQISKEELKLVMQTL---GPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65

Query: 365 EFQQRIWKTT 374
           EF   + K +
Sbjct: 66  EFLVMMKKIS 75

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           AF   D DG+  I+ +     +  L   G K  L D+E  ++  +ADIDG+G ++Y+EF
Sbjct: 88  AFKVFDRDGNGLISAAELRHVMTNL---GEK--LTDDEVDEMIREADIDGDGHINYEEF 141

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 38.6 bits (91), Expect = 8e-04
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 10/63 (15%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
           +AFA    D DG  IT       +  L  N T       + E +D+  + D DGNG +D+
Sbjct: 14  EAFALFDKDGDG-TITTKELGTVMRSLGQNPT-------EAELQDMINEVDADGNGTIDF 65

Query: 364 KEF 366
            EF
Sbjct: 66  PEF 68

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     D+ G  I+        ++L   G    L DEE + +  + D+DG+G ++  E
Sbjct: 100 RAFQLFDDDHTG-KISIKNLRRVAKEL---GET--LTDEELRAMIEEFDLDGDGEINENE 153

Query: 366 F 366
           F
Sbjct: 154 F 154

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 11/82 (13%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF+    +NDG ++ Y     A++ L   G +  L   E  DL  + D +G  ++ Y +
Sbjct: 27  EAFSLFDMNNDG-FLDYHELKVAMKAL---GFE--LPKREILDLIDEYDSEGRHLMKYDD 80

Query: 366 FQQRIWKTTWSDQRNDLNDEDE 387
           F          ++    +  DE
Sbjct: 81  FY-----IVMGEKILKRDPLDE 97

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           D F     + DG YI        L+     G    + +++ ++L    D + +G +DY E
Sbjct: 99  DLFRMFDKNADG-YIDLEELKIMLQAT---GET--ITEDDIEELMKDGDKNNDGRIDYDE 152

Query: 366 F 366
           F
Sbjct: 153 F 153

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 17/97 (17%)

Query: 306 DAFA-FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
            AF  F+    DG  I+     + +  L   G       EE +++  + D DG+G VD+ 
Sbjct: 22  AAFDIFVLGAEDG-SISTKELGKVMRML---GQN--PTPEELQEMIDEVDEDGSGTVDFD 75

Query: 365 EF----QQRIWKTTWSDQRNDLN------DEDEDGFV 391
           EF     + +   +      +L+      D++ DG++
Sbjct: 76  EFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYI 112

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 15/110 (13%), Positives = 33/110 (30%), Gaps = 18/110 (16%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDAF---AFLKADNDGD-YITYSGFCEALEQLNLTGHKH 339
             +  +  M + +    + +  +      F   D + D  I+   +      L       
Sbjct: 71  DETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML------- 123

Query: 340 GLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDG 389
           GL        +   D + +G++  +EF        +      +ND D   
Sbjct: 124 GLDKTMAPASFDAIDTNNDGLLSLEEF-VIAGSDFF------MNDGDSTN 166

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 310 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR 369
           FL+    G  +    F    +  +     +  A +  + ++   D +G+  +D+ E+   
Sbjct: 31  FLEECPSG-TLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAA 84

Query: 370 IWKTTWSDQRNDLN------DEDEDGFV 391
           +         + L       D+D +G +
Sbjct: 85  LNLVLRGTLEHKLKWTFKIYDKDRNGCI 112

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 293 FKCLLRRASLTETDAFA---FLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKD 348
           FK   +     E   +    F   D +GD  I +  +  AL  +       G  + + K 
Sbjct: 45  FKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL-----RGTLEHKLKW 99

Query: 349 LWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTI 399
            +   D D NG +D +E    +       +   +  E E      + E+ +
Sbjct: 100 TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVV 150

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 13/86 (15%)

Query: 296 LLRRASLTETDAFAFLKADNDGD-YITYS------------GFCEALEQLNLTGHKHGLA 342
           L+ R +L     + F   D D +  I                   ++E       K    
Sbjct: 87  LVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTP 146

Query: 343 DEETKDLWVQADIDGNGVVDYKEFQQ 368
           +E    +++  D +G+G +   EF +
Sbjct: 147 EEVVDRIFLLVDENGDGQLSLNEFVE 172

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F   D +G+  +  +     L  L   G K  + +EE + + +    D NG ++Y+ F 
Sbjct: 92  GFRVFDKEGNGKVMGAELRHVLTTL---GEK--MTEEEVETV-LAGHEDSNGCINYEAFL 145

Query: 368 QRI 370
           + I
Sbjct: 146 KHI 148

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           DAF     + DG  I+ S   EA+    L GH+  +   + +++    D++G+G VD++E
Sbjct: 92  DAFREFDTNGDG-EISTSELREAMR--ALLGHQ--VGHRDIEEIIRDVDLNGDGRVDFEE 146

Query: 366 F 366
           F
Sbjct: 147 F 147

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D DG YI        +  +   G+     + E  +L  Q +++  G VD+ +
Sbjct: 15  EAFREFDKDKDG-YINCRDLGNCMRTM---GYM--PTEMELIELSQQINMNLGGHVDFDD 68

Query: 366 F-----QQRIWKTTWSDQRNDLN------DEDEDGF 390
           F      + + +T       +L       D + DG 
Sbjct: 69  FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGE 104

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 43.0 bits (101), Expect = 6e-05
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 8/62 (12%)

Query: 308 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           F F   D  GD  +    F    +          L   +   ++      G    D   +
Sbjct: 109 FLFKGMDVSGDGIVDLEEFQNYCKNF-------QLQCADVPAVYNVITDGGKVTFDLNRY 161

Query: 367 QQ 368
           ++
Sbjct: 162 KE 163

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 24/142 (16%)

Query: 241 TAHQYTDADAHKWVSHRNHRGN------ICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 294
           TA Q      H W+   +                  +      +KL +A    A+  M  
Sbjct: 270 TATQ---CLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA----ALLYMAS 322

Query: 295 CLLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQL---------NLTGHKHGLADE 344
            L       + T+ F  L  +NDG  +          +          +L  ++    ++
Sbjct: 323 KLTTLDETKQLTEIFRKLDTNNDG-MLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED 381

Query: 345 ETKDLWVQADIDGNGVVDYKEF 366
           +   L    D+DG+G ++Y EF
Sbjct: 382 QIDSLMPLLDMDGSGSIEYSEF 403

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHG---LADEETKDLWVQADIDGNGVVDYK 364
            + K D D   YI+ +     L+ L L   K       DE T  +    D + +G +D  
Sbjct: 109 IWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLN 168

Query: 365 EFQQ 368
           +  +
Sbjct: 169 DLAR 172

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 292 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 349
           +       A+      +AF   D D D  +        +  L   G    L+  E K L 
Sbjct: 86  LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLI 145

Query: 350 ---WVQADIDGNGVVDYKEFQQRIWKTTW 375
                ++DID +G ++  EFQ  I ++  
Sbjct: 146 DNILEESDIDRDGTINLSEFQHVISRSPD 174

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 8/62 (12%)

Query: 308 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           F F   D  GD  I    +              G+   +    +      G  +V  + F
Sbjct: 113 FMFDVNDTSGDNIIDKHEYSTVYMSY-------GIPKSDCDAAFDTLSDGGKTMVTREIF 165

Query: 367 QQ 368
            +
Sbjct: 166 AR 167

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 26/109 (23%)

Query: 308 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETK----------DLWVQADIDG 357
             F   ++DG  I +  F  A++++           +  +           L   AD + 
Sbjct: 19  NTFYDCNHDG-VIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENE 77

Query: 358 NGVVDYKEF---------------QQRIWKTTWSDQRNDLNDEDEDGFV 391
           +  V  +E+                   W T + +   D+ND   D  +
Sbjct: 78  DEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNII 126

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 308 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLW----VQADIDGNGVVD 362
           FAF   D D D YI+     + L+   + G+   L D + + +     + AD DG+G + 
Sbjct: 79  FAFRIYDMDKDGYISNGELFQVLK--MMVGNN--LKDTQLQQIVDKTIINADKDGDGRIS 134

Query: 363 YKEFQQRIWKTTWSD 377
           ++EF   +       
Sbjct: 135 FEEFCAVVGGLDIHK 149

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 15/84 (17%)

Query: 290 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
           F  F  ++ R  + +T        AF     +  G YI  +   +AL  L   G +  L 
Sbjct: 61  FPEFLSMMGR-RMKQTTSEDILRQAFRTFDPEGTG-YIPKAALQDALLNL---GDR--LK 113

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
             E  +     + +  G + Y  F
Sbjct: 114 PHEFAEFLGITETE-KGQIRYDNF 136

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF    ++  G +IT  G    L+Q    G +  +      +++ +AD  GNG + + E
Sbjct: 10  EAFELFDSERTG-FITKEGLQTVLKQF---GVR--VEPAAFNEMFNEADATGNGKIQFPE 63

Query: 366 F 366
           F
Sbjct: 64  F 64

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 290 FGMFKCLLRRASLTETDAFA-FLKA----DNDGD-YITYSGFCEALEQLNLTGHKHGLAD 343
           F  F          E   FA +++A    D +G  +I+ +     L  L   G +  L+D
Sbjct: 65  FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL---GER--LSD 119

Query: 344 EETKDLWVQADI--DGNGVVDYKEFQQRIWKTTWSDQ 378
           E+  ++    D+  D  G V Y++F +++    + D+
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 40.1 bits (95), Expect = 3e-04
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 23/98 (23%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
           +AFA    DN G  I+ S     +  L  + +       + E  DL  + D+DGN  +++
Sbjct: 15  EAFALFDKDNSG-SISASELATVMRSLGLSPS-------EAEVADLMNEIDVDGNHAIEF 66

Query: 364 KEF----QQRIWKTTWSDQRNDLN------DEDEDGFV 391
            EF     +++      D   +L       D++ DG +
Sbjct: 67  SEFLALMSRQLKCN---DSEQELLEAFKVFDKNGDGLI 101

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 296 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL----W 350
               A + +   F+F   D     +I      + +    L      L D   +D+    +
Sbjct: 114 FHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT-LAESGMNLKDTVIEDIIDKTF 172

Query: 351 VQADIDGNGVVDYKEFQQ 368
            +AD   +G +D +E++ 
Sbjct: 173 EEADTKHDGKIDKEEWRS 190

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F K D+ GD  +  +    AL      G++  ++++  + L  + D    G + + ++ 
Sbjct: 98  GFRKRDSSGDGRLDSNEVRAALLSS---GYQ--VSEQTFQALMRKFDRQRRGSLGFDDYV 152

Query: 368 QR-IWKTTWSDQ-RNDLNDEDEDGFVKSSLEQ 397
           +  I+     +       D +  G V  + + 
Sbjct: 153 ELSIFVCRVRNVFA--FYDRERTGQVTFTFDT 182

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 292 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 349
                   A + E   FAF   D     +I      E +  L L   +  L+++  + + 
Sbjct: 99  SLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL-LHESELVLSEDMIEVMV 157

Query: 350 ---WVQADIDGNGVVDYKEFQQ 368
              +VQAD   +G +D  E++ 
Sbjct: 158 DKAFVQADRKNDGKIDIDEWKD 179

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 37.8 bits (88), Expect = 9e-04
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 8/59 (13%)

Query: 308 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           F  L+ D    +I+ S    A         K  L+  E   +W  +D D +G +   EF
Sbjct: 28  FRSLQPDPSS-FISGS---VAKNFF----TKSKLSIPELSYIWELSDADCDGALTLPEF 78

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 23/122 (18%)

Query: 300 ASLTETDAF--AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID 356
           A+L +       F + D D    I+ +   +AL     T           + +    D +
Sbjct: 1   AALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFN----PVTVRSIISMFDRE 56

Query: 357 GNGVVDYKEFQQRIWKTTWSDQRN-----DLNDEDEDGFVKSSLE-----QTIGFSVKNA 406
               V++ EF        W    +        D D  G +    E        G+ + + 
Sbjct: 57  NKAGVNFSEF-----TGVWKYITDWQNVFRTYDRDNSGMI-DKNELKQALSGFGYRLSDQ 110

Query: 407 VL 408
             
Sbjct: 111 FH 112

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 309 AFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F   A  DG  I        L Q  + G       E  + +    D D +G + + EF+
Sbjct: 38  YFAAVAGQDGQ-IDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK 96

Query: 368 QRIWKTTWSDQRN-DLNDEDEDGFVKSS 394
           + +W      +++    D D  G V   
Sbjct: 97  E-LWAVLNGWRQHFISFDTDRSGTVDPQ 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	445
3ngq_A	398	CCR4-NOT transcription complex subunit 6-like; alp	99.97
3mpr_A	298	Putative endonuclease/exonuclease/phosphatase FAM	99.96
3g6s_A	267	Putative endonuclease/exonuclease/phosphatase fami	99.96
3l1w_A	257	Uncharacterized protein; APC29019.2, conserved pro	99.95
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	99.94
4fva_A	256	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	99.94
4gz1_A	256	Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl	99.93
4f1h_A	250	Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com	99.93
3teb_A	266	Endonuclease/exonuclease/phosphatase; PSI-biology,	99.93
1zwx_A	301	SMCL, sphingomyelinase-C; dnase1-like fold, beta-h	99.92
4b8c_D	727	Glucose-repressible alcohol dehydrogenase transcr	99.92
3i41_A	317	Beta-hemolysin; beta toxin, sphingomyelinase, toxi	99.91
2jc4_A	256	Exodeoxyribonuclease III; hydrolase, repair phosph	99.9
2ddr_A	306	Sphingomyelin phosphodiesterase; DNAse I like fold	99.89
1ako_A	268	Exonuclease III; AP-endonuclease, DNA repair; 1.70	99.89
3g91_A	265	MTH0212, exodeoxyribonuclease; double-strand speci	99.88
2jc5_A	259	Exodeoxyribonuclease; hydrolase, repair phosphodie	99.87
1vyb_A	238	ORF2 contains A reverse transcriptase domain; endo	99.87
2voa_A	257	AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP	99.87
2o3h_A	285	DNA-(apurinic or apyrimidinic site) lyase; APE, en	99.85
1hd7_A	318	DNA-(apurinic or apyrimidinic site) lyase; DNA rep	99.85
2j63_A	467	AP-endonuclease; base excision repair, lyase; 2.48	99.85
1wdu_A	245	TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA	99.81
2a40_B	260	Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse	99.81
2ei9_A	240	Non-LTR retrotransposon R1BMKS ORF2 protein; four	99.74
2f1n_A	262	CDT B, cytolethal distending toxin subunit B; E.co	99.65
1sr4_B	261	CDT B, cytolethal distending toxin protein B; bact	99.61
2imq_X	282	Salivary nitrophorin; ferrous heme, beta-sandwich,	99.53
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.47
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.37
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.36
1i9z_A	347	Synaptojanin, phosphatidylinositol phosphate phosp	99.33
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.31
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.31
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.3
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.29
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.28
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.28
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.28
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.27
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.27
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.27
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.27
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.26
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.24
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.23
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.23
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.23
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.23
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.23
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.22
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	99.22
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.22
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.22
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.21
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.21
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.19
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.19
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.19
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.18
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.18
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.18
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.18
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.16
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.16
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.15
2jq6_A	139	EH domain-containing protein 1; metal binding prot	99.15
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.15
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.14
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	99.14
3fwb_A	161	Cell division control protein 31; gene gating, com	99.14
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.14
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.14
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.14
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.13
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.13
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.13
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	99.13
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.12
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.12
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.12
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.11
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.11
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.11
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.11
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.11
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.11
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	99.1
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.1
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.09
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.09
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.09
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.09
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.08
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.08
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	99.08
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.08
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	99.08
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.08
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.07
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	99.07
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.06
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.06
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.05
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	99.05
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.05
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.05
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.05
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.05
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.04
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.04
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.04
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	99.04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.04
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.04
1y1x_A	191	Leishmania major homolog of programmed cell death	99.03
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	99.03
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	99.03
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.03
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.02
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.02
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.01
2xsw_A	357	72 kDa inositol polyphosphate 5-phosphatase; inosi	99.01
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.01
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.01
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	99.0
3fwb_A	161	Cell division control protein 31; gene gating, com	99.0
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.0
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.0
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.0
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.99
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.99
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.98
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.98
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.98
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.98
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.98
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.98
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.97
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.97
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.97
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.97
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.96
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.96
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.96
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.95
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.95
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.94
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.94
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	98.94
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.94
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.93
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.93
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.93
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.93
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.93
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.93
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.91
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.91
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.91
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.91
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.9
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.9
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.89
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.88
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.87
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.87
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.87
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.86
1y1x_A	191	Leishmania major homolog of programmed cell death	98.86
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.86
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.85
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.85
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.84
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.84
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.84
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.84
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.83
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.83
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.82
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.82
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.82
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.81
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.81
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.8
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.8
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.8
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.79
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.78
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.78
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.78
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.78
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.78
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.77
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.77
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.75
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.75
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.75
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.74
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.74
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.73
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	98.73
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.73
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.73
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.72
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.72
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.71
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.71
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.7
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.7
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.7
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.7
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.7
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.69
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.68
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.68
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.67
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.67
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.66
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.66
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.65
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.65
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.65
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.64
4a9c_A	316	Phosphatidylinositol-3,4,5-trisphosphate 5-phosph;	98.64
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.63
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.63
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	98.63
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.62
3mtc_A	313	Type II inositol-1,4,5-trisphosphate 5-phosphatas;	98.62
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.61
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.61
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.6
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.6
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.6
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.59
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.59
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.58
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.58
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.57
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.57
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.57
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.56
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.56
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.53
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.53
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.52
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.51
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.51
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.51
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.5
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.49
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.49
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	98.47
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.42
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.42
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.4
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.37
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.35
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.32
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.32
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.3
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.26
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	98.24
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.22
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.19
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.14
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.11
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.07
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	97.91
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.9
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	97.87
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	97.86
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	97.83
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	97.82
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	97.8
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	97.79
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	97.78
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	97.78
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	97.75
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	97.7
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	97.68
1nub_A	229	Basement membrane protein BM-40; extracellular mod	97.62
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	97.49
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	97.47
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	97.26
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	97.04
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	96.99
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	96.97
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	96.7
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	96.1
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	95.84
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	95.82
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	95.39
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	94.8
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	94.69
3li6_A	66	Calcium-binding protein; calcium signaling protein	94.1
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	93.56
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	93.54
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	93.4
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	93.37
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	93.36
1c07_A	95	Protein (epidermal growth factor receptor pathway	93.05
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	93.02
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	92.99
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	92.66
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	92.65
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	92.39
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	92.38
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	92.29
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	91.95
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	91.79
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	91.59
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	91.37
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	91.21
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	91.16
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	90.76
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	90.65
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	90.52
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	90.4
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	90.34
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	90.31
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	89.92
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	89.84
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	89.75
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	89.46
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	89.36
2jrf_A	184	Tubulin polymerization-promoting protein family me	88.46
1wlm_A	151	Protein CGI-38; structural genomics, NPPSFA, natio	88.45
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	88.42
4fl4_A	88	Glycoside hydrolase family 9; structural genomics,	88.4
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	87.96
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	87.78
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	87.59
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	87.57
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	87.5
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	87.39
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	87.37
2jq6_A	139	EH domain-containing protein 1; metal binding prot	87.17
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	87.08
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	86.65
4dh2_B	82	Dockerin type 1; cellulosome, cohesin, type I cohe	86.33
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	86.32
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	86.28
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	86.24
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	86.1
1pul_A	125	Hypothetical protein C32E8.3 in chromosome I; alph	86.09
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	85.52
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	84.99
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	80.72

>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A

Probab=99.97  E-value=1.8e-30  Score=254.16  Aligned_cols=203  Identities=22%  Similarity=0.362  Sum_probs=147.9

Q ss_pred             CCceEEEeeccccccccCCCCc-cccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccE
Q 013328           27 QPCITCTTFNILAPIYKRLSNE-NCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  105 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~-~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  105 (445)
                      ..+||||||||++..|.....+ +|  +.....|..|+..|+++|...+|||||||||+  ..++.+.+...|..+||..
T Consensus        29 ~~~~~V~syNIl~d~~~~~~~~~~~--p~~~~~W~~R~~~i~~~i~~~~pDIi~lQEv~--~~q~~~~l~~~L~~~gY~~  104 (398)
T 3ngq_A           29 SASFTVMCYNVLCDKYATRQLYGYC--PSWALNWEYRKKGIMEEIVNCDADIISLQEVE--TEQYFTLFLPALKERGYDG  104 (398)
T ss_dssp             CEEEEEEEEECCCGGGCCTTTCTTS--CHHHHSHHHHHHHHHHHHHHHCCSEEEEEEEE--HHHHHHTHHHHHHHTTEEE
T ss_pred             CCCEEEEEEccCcCcCCccccccCC--ChhhcCHHHHHHHHHHHHHhcCCCEEEEeccc--HHHHHHHHHHHHHhCCceE
Confidence            3479999999999877765443 33  23467899999999999999999999999994  3344456677788889998


Q ss_pred             EEecCCC---------CCCceEEEEEecCcceEEeeEEEEecCCC-----------------Cceeeeeccccccccccc
Q 013328          106 FKLARTN---------NRGDGLLTAVHKDYFRVVNYRDLLFNDFG-----------------DRVAQLLHVELIDPFSQC  159 (445)
Q Consensus       106 ~~~~~~~---------~~~~G~ai~~~s~~~~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~  159 (445)
                      ++..+..         ..+.|||||||+++|++++...++|++.+                 ++++....++........
T Consensus       105 v~~~k~r~~~~~~~~~~~~eG~AIfyr~~~f~ll~~~~i~ls~~~~~~s~~~~~~~~Ri~t~~nval~~~L~~~~~~~~~  184 (398)
T 3ngq_A          105 FFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGA  184 (398)
T ss_dssp             EEEESCTTSCCCHHHHHTCEEEEEEEETTTEEEEEEEEEEHHHHHHHTCTTCHHHHHTTTTCCCEEEEEEEEECGGGC--
T ss_pred             EEecCCCccccccccccCcceeEEEEECCcceEEeeeEEecCCCcccccccchhhhcceeeccceeEEEEEEEccccccc
Confidence            8864432         35679999999999999999999997643                 223333333322110000


Q ss_pred             c----cCCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcC---------CCCCcEEEeecCCCCcCcch
Q 013328          160 R----NGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN---------LKPIPIILCGDWNGSKRGHV  226 (445)
Q Consensus       160 ~----~~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~---------~~~~pvIl~GDFN~~p~s~~  226 (445)
                      .    ....++.|+|+||||.+.+  .....|+.|+..|++.++++.++..         ....|+|||||||+.|++.+
T Consensus       185 ~~~~~~~~~~~~l~V~nTHL~~~p--~~~~vRl~Q~~~Ll~~l~~~~~~~~~~~~~~~~~~~~~PvIl~GDFNs~P~s~v  262 (398)
T 3ngq_A          185 GMKPIHAADKQLLIVANAHMHWDP--EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGV  262 (398)
T ss_dssp             ---------CCEEEEEEEECCCCT--TCHHHHHHHHHHHHHHHHHHHCC-------------CCCEEEEEECSCCTTSHH
T ss_pred             ccccccCCCCcEEEEEEeCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCceEEEeeCCCCCCCHH
Confidence            0    0125678999999999954  4568899999999999998764321         14579999999999999999


Q ss_pred             hHhhhhCCCc
Q 013328          227 YKFLRSQGFV  236 (445)
Q Consensus       227 ~~~l~~~g~~  236 (445)
                      |+.|.+ |.+
T Consensus       263 y~~L~~-G~v  271 (398)
T 3ngq_A          263 VEYLSN-GGV  271 (398)
T ss_dssp             HHHHHH-TEE
T ss_pred             HHHHhc-CCC
Confidence            999954 443

>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=5.7e-29  Score=237.47  Aligned_cols=228  Identities=19%  Similarity=0.239  Sum_probs=156.8

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      +.+||||||||+......        ......|..|+..|++.|...+|||||||||.  . .....|...|.  +|.++
T Consensus         4 ~~~lrV~t~Ni~~~~~~~--------~~~~~~w~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~l~--~y~~~   70 (298)
T 3mpr_A            4 PTSLTVASYNLRNANGSD--------SARGDGWGQRYPVIAQMVQYHDFDIFGTQECF--L-HQLKDMKEALP--GYDYI   70 (298)
T ss_dssp             CEEEEEEEEECCCCCHHH--------HHHTCCHHHHHHHHHHHHHHTTCSEEEEESBC--H-HHHHHHHHHST--TEEEE
T ss_pred             CCcEEEEEEEeccCCCCC--------cccccCHHHHHHHHHHHHHHcCCCEEEEeCCC--H-HHHHHHHHhCC--CCcEE
Confidence            457999999998552100        00145799999999999999999999999994  2 33445555554  56665


Q ss_pred             EecCCC--CCCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccccccccc--ccCCCCceEEEEEeeeeCCCCCC
Q 013328          107 KLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQC--RNGDLRQEILIVNTHLLFPHDSS  182 (445)
Q Consensus       107 ~~~~~~--~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~v~v~n~HL~~~~~~~  182 (445)
                      ...+..  ..+.++||+|++++|+++....+.+++.+............+....+  +...+|+.|.|+|+||.+    .
T Consensus        71 ~~~~~~g~~~g~~~aily~~sr~~i~~~~~~~l~~~p~~~~~~~~~~~~R~~~~~~~~~~~~g~~~~v~~~Hl~~----~  146 (298)
T 3mpr_A           71 GVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDH----I  146 (298)
T ss_dssp             CCCTTTSSSSSCBCCEEEETTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCS----S
T ss_pred             EEecCCCCCCCceeEEEEecCceEEEeccEEEccCCCCccCcccccccCceeEEEEEEEcCCCCEEEEEEecCCC----C
Confidence            544432  24456999999888999999998887654322200000000111112  222568899999999953    3


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCC-CcccccccccCCCCCCCcceeccCCCC
Q 013328          183 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG-FVSSYDTAHQYTDADAHKWVSHRNHRG  261 (445)
Q Consensus       183 ~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g-~~d~~~~~~~~~~~~~~t~~~~~~~~~  261 (445)
                      ....|..|+..+.+.++++...   .+.|+|||||||+.|.+..++.|.+.| +.|+|...... .....||+.+.....
T Consensus       147 ~~~~R~~q~~~l~~~i~~~~~~---~~~pvIl~GDfN~~~~~~~~~~l~~~g~l~D~~~~~~~~-~~~~~T~~~~~~~~~  222 (298)
T 3mpr_A          147 GKKARVESAFLVQEKMKELGRG---KNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYR-YALNGTFNNFDPNSF  222 (298)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTT---SCCCEEEEEECSSCTTSHHHHHHHTTSSSEEHHHHCSEE-ECSSCSBCTTCTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEEeCCCCCCCHHHHHHhcCCcchhhHhhhccc-CCCCCCccCCCCCCC
Confidence            4578999999999888775321   367999999999999999999998887 99998876531 112357766543222


Q ss_pred             cccccceeeecCCc
Q 013328          262 NICGVDFIWLLNPN  275 (445)
Q Consensus       262 ~~~rIDyi~~~~~~  275 (445)
                      ...||||||+++..
T Consensus       223 ~~~rID~Il~s~~~  236 (298)
T 3mpr_A          223 TESRIDHIFVSPSF  236 (298)
T ss_dssp             CSCCCEEEEECTTS
T ss_pred             CCceEEEEEeCCCe
Confidence            35799999998654

>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}

Probab=99.96  E-value=2.1e-28  Score=229.64  Aligned_cols=223  Identities=17%  Similarity=0.233  Sum_probs=156.2

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      .+||||||||+....          .+....|..|...|++.|...+|||||||||.  . .....+...|  .+|.++.
T Consensus         2 ~~l~v~t~Ni~~~~~----------~~~~~~~~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~l--~~y~~~~   66 (267)
T 3g6s_A            2 TDVRWATFNIRYDNP----------QDSLNNWQYRKDRVCQFIKDHELDIVGMQEVL--H-NQFQDLRAGL--PEYDGIG   66 (267)
T ss_dssp             EEEEEEEEECCCCCG----------GGGGGSGGGTHHHHHHHHHHTTCSEEEEESBC--H-HHHHHHHHHC--TTEEEEC
T ss_pred             CcEEEEEEEeccCCC----------CccccCHHHHHHHHHHHHHHcCCCEEEEecCC--H-HHHHHHHHhc--cCCcEEE
Confidence            479999999996631          12345789999999999999999999999994  2 2334455555  3677765


Q ss_pred             ecCCC--CCCceEEEEEecCcceEEeeEEEEecCCCCcee-eeeccccccccc--ccccCCCCceEEEEEeeeeCCCCCC
Q 013328          108 LARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVA-QLLHVELIDPFS--QCRNGDLRQEILIVNTHLLFPHDSS  182 (445)
Q Consensus       108 ~~~~~--~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~g~~v~v~n~HL~~~~~~~  182 (445)
                      ..+..  ..+.+++|+|++++++++....+.++..+.... ........+...  .......++.+.|+|+||.+    .
T Consensus        67 ~~~~~~~~~g~~~ail~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~v~~~Hl~~----~  142 (267)
T 3g6s_A           67 VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDH----V  142 (267)
T ss_dssp             CCTTTSSSSSCBCCEEEETTTEEEEEEEEEESSSCTTSTTCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCS----S
T ss_pred             ecCCCCCcCCceeEEEEEccceEEEecccEecCCCCCccccccccccCcceEEEEEEEEcCCCCEEEEEEeCCCC----C
Confidence            44432  244569999997779999999988876543221 000000001111  12222468899999999954    3


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCC--CcccccccccCCCCCCCcceeccCC-
Q 013328          183 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG--FVSSYDTAHQYTDADAHKWVSHRNH-  259 (445)
Q Consensus       183 ~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g--~~d~~~~~~~~~~~~~~t~~~~~~~-  259 (445)
                      ....|..|++.+.+.++++.     .+.|+|||||||+.|.+..++.|...|  +.|+|...+.. .....||+...+. 
T Consensus       143 ~~~~R~~q~~~l~~~l~~~~-----~~~pvIl~GDfN~~~~~~~~~~l~~~~~~l~d~~~~~~~~-~~~~~T~~~~~~~~  216 (267)
T 3g6s_A          143 GEEARRQSALLIIRKIKEIV-----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARV-TGVDYTFHDFARIP  216 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHT-----TTSCEEEEEECSSCTTSHHHHHHHSSSSCCEEHHHHCSEE-EECSCSBCTTTTSC
T ss_pred             CHHHHHHHHHHHHHHHHHhc-----CCCCEEEEeECCCCCCCHHHHHhhcCCcchhhhHhhhccc-cCCCCCEeCCCCCC
Confidence            35789999999999988763     367999999999999999999998887  99999876531 1224677766532 


Q ss_pred             CCcccccceeeecCCc
Q 013328          260 RGNICGVDFIWLLNPN  275 (445)
Q Consensus       260 ~~~~~rIDyi~~~~~~  275 (445)
                      .....||||||+++..
T Consensus       217 ~~~~~riD~I~~s~~~  232 (267)
T 3g6s_A          217 AEDCEKIDFIFVTPQV  232 (267)
T ss_dssp             GGGCCCCEEEEECTTS
T ss_pred             CCCCCcEeEEEeCCCc
Confidence            1224699999998653

>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis}

Probab=99.95  E-value=1.1e-27  Score=223.28  Aligned_cols=214  Identities=16%  Similarity=0.256  Sum_probs=149.2

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      ||||||||++...          ......|..|+..+++.|...+|||||||||+  . .....+...   .+|.++...
T Consensus         1 lrv~t~Ni~~~~~----------~~~~~~w~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~---l~y~~~~~~   64 (257)
T 3l1w_A            1 MKIATYNVRVDTE----------YDQDWQWSFRKEAVCQLINFHDWSLCCIQEVR--P-NQVRDLKAY---TTFTCLSAE   64 (257)
T ss_dssp             CEEEEEECCCCCG----------GGGGGSHHHHHHHHHHHHHHHCCSEEEEEEEC--H-HHHHHHHHH---SSSEEEEEE
T ss_pred             CEEEEEEeccCCC----------CccccChHHHHHHHHHHHHHcCCCEEEEeCCC--H-HHHHHHHhc---CCCcEEEec
Confidence            6999999996531          12345799999999999999999999999994  2 223334443   378777655


Q ss_pred             CCC-CCCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccccccccc--ccCCCCceEEEEEeeeeCCCCCCChhh
Q 013328          110 RTN-NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQC--RNGDLRQEILIVNTHLLFPHDSSLSLV  186 (445)
Q Consensus       110 ~~~-~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~v~v~n~HL~~~~~~~~~~~  186 (445)
                      +.. ..+.|+||++|+++|+++....+.++..++...........+....+  ....+|+.+.|+|+||.+.    ....
T Consensus        65 ~~~~~~~~g~ail~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~v~~~Hl~~~----~~~~  140 (257)
T 3l1w_A           65 REGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCPRIALWGLFKETTQNTPFLVINVHLDHI----SAHA  140 (257)
T ss_dssp             SSSSSCSCEEEEEECTTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTCSSCEEEEEEECCSS----CHHH
T ss_pred             ccCCCCCceEEEEEEcceEEEEecCeEECcCCCCcccccccccccceeEEEEEEEcCCCCEEEEEEeCCCCC----CHHH
Confidence            543 46679999999888999999999887654322200000000111112  2223578999999999653    3467


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCCC--Cccc
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHR--GNIC  264 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~--~~~~  264 (445)
                      |..|+..+.+.+++...    .+ |+|||||||+.|.+..++.+. .|+.|+|...+..  ....||..+.+..  ....
T Consensus       141 r~~q~~~l~~~i~~~~~----~~-pvil~GDfN~~~~~~~~~~l~-~~l~d~~~~~~~~--~~~~t~~~~~~~~~~~~~~  212 (257)
T 3l1w_A          141 RLAGMTVILEELHDKIA----QY-PTLLMGDFNAESGEEVHQLVQ-KKFQDSKNLATHY--GPRGTFQNFTYTKPWAELE  212 (257)
T ss_dssp             HHHHHHHHHHHTHHHHH----HS-CEEEEEECCCCTTSHHHHHHT-TTCEEGGGTSEEE--SCSCCBCTTCTTCCGGGCB
T ss_pred             HHHHHHHHHHHHHHHcC----CC-CEEEEeeCCCCCCcHHHHHhh-hhccchhhhhccc--CCCCcccCCcccCCCCCCC
Confidence            99999999999884332    23 999999999999999999884 5999999877543  2346666554221  1236


Q ss_pred             ccceeee
Q 013328          265 GVDFIWL  271 (445)
Q Consensus       265 rIDyi~~  271 (445)
                      ||||||+
T Consensus       213 riD~i~~  219 (257)
T 3l1w_A          213 EIDYIYV  219 (257)
T ss_dssp             CCEEEEE
T ss_pred             ceeEEEE
Confidence            9999999

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=99.94  E-value=1.9e-26  Score=225.30  Aligned_cols=214  Identities=16%  Similarity=0.126  Sum_probs=146.4

Q ss_pred             cccCCCCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhc
Q 013328           21 IRDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD  100 (445)
Q Consensus        21 ~~~~~~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~  100 (445)
                      ..+...+..||||||||++..              ...+..|...|+++|+..+|||||||||...   ....+...+. 
T Consensus       111 ~~~~~~~~~lkVlSWNI~Gl~--------------~~~~~~R~~~I~~~I~~~~PDIV~LQEv~~~---~~~~l~~~~~-  172 (362)
T 4gew_A          111 TAEDLKGFEVSVMSWNIDGLD--------------GRSLLTRMKAVAHIVKNVNPDILFLQEVVDR---DLAPIDKLQS-  172 (362)
T ss_dssp             --CTTTTCEEEEEEEECCTTC--------------CTTHHHHHHHHHHHHHHHCCSEEEEEEECST---TCHHHHGGGG-
T ss_pred             CCCCCCCCeEEEEEEEeCCCC--------------CcCHHHHHHHHHHHHHHcCCCEEEEEcCChh---HhHHHHHhcC-
Confidence            345556678999999998541              2347779999999999999999999999532   2233444333 


Q ss_pred             cCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCC-ceeeeecccccccccccccCCCCceEEEEEeeeeCCC
Q 013328          101 AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGD-RVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH  179 (445)
Q Consensus       101 ~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~  179 (445)
                       +|.+++.  ....+.|+|||+|++ +++.....+.++.... +....           +.+..+|..|.|+|+||.++.
T Consensus       173 -~y~~~~~--~~~~~~G~aIlsk~~-i~~~~~~~~~~~~~~~~r~~l~-----------~~i~~~g~~l~v~ntHL~s~~  237 (362)
T 4gew_A          173 -LYKIYYS--NKGCQYYTAILVSKM-FDVEKHDVIHFQNSGMYRTLQI-----------LEGSIGGLKVFLLNTHLESTR  237 (362)
T ss_dssp             -TEEEEES--STTSSSEEEEEEETT-EEEEEEEEEECTTCSSCCEEEE-----------EEEEETTEEEEEEEEECCCSG
T ss_pred             -CceEEeC--CCCCCceEEEEEecc-CccccccccCCCCCcccceEEE-----------EEEEECCEEEEEEEecCCccc
Confidence             5555443  344567999998877 7777776666654321 11111           233346889999999997644


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCC
Q 013328          180 DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH  259 (445)
Q Consensus       180 ~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~  259 (445)
                        .....|..|+..+.+.+..+...  ..+.|+|||||||..|.+...   ...|+.|+|+..+.. ....+||....+.
T Consensus       238 --~~~~~R~~Q~~~l~~~~~~~~~~--~~~~pvIl~GDFN~~p~~~~~---~~~gl~Da~~~~~~~-~~~~~Tw~~~~n~  309 (362)
T 4gew_A          238 --EHRPQRCAQFGFCMDKVREIIAQ--NPGALVFFGGDLNLRDEEVSR---VPDGVKDAWEAAGSD-NKTKFTWDTFKND  309 (362)
T ss_dssp             --GGHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECCCCGGGCCC---CCTTCEEHHHHTTCC-GGGCCSEETTTCT
T ss_pred             --cchhHHHHHHHHHHHHhHhhhhc--CCCCCeEEeecCCCCCcccch---hcchHHHHHHHhCCC-CCCCcCcccccCc
Confidence              34567899999988888776543  257899999999998876432   356899999887543 2235677654422


Q ss_pred             -----CCcccccceeeecCCc
Q 013328          260 -----RGNICGVDFIWLLNPN  275 (445)
Q Consensus       260 -----~~~~~rIDyi~~~~~~  275 (445)
                           .+...||||||+++..
T Consensus       310 ~~~~~~~~~~RIDyIf~s~~l  330 (362)
T 4gew_A          310 NKQGFHGAKMRFDRLYWSGPL  330 (362)
T ss_dssp             TSCCSSCCEECCEEEEEESSC
T ss_pred             ccccCCCCCcceEEEEEcCCc
Confidence                 1223589999998764

>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}

Probab=99.94  E-value=6e-26  Score=210.57  Aligned_cols=214  Identities=14%  Similarity=0.105  Sum_probs=143.5

Q ss_pred             ccCCCCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhcc
Q 013328           22 RDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDA  101 (445)
Q Consensus        22 ~~~~~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~  101 (445)
                      .+.....+||||||||++..              ...|..|.+.|+++|++.+|||||||||....   ...+...+   
T Consensus         6 ~~~~~~~~l~v~s~Ni~g~~--------------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~~~~---~~~l~~~~---   65 (256)
T 4fva_A            6 AEDLKGFEVSVMSWNIDGLD--------------GRSLLTRMKAVAHIVKNVNPDILFLQEVVDRD---LAPIDKLQ---   65 (256)
T ss_dssp             --CCTTCEEEEEEEECCTTC--------------CTTHHHHHHHHHHHHHHHCCSEEEEEEECSTT---CHHHHGGG---
T ss_pred             CCcCCCCEEEEEEEecCCCC--------------CcCHHHHHHHHHHHHHHcCCCEEEEEecChhH---hHHHHHhc---
Confidence            34445568999999998441              23578899999999999999999999995322   23333333   


Q ss_pred             CccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC
Q 013328          102 GYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS  181 (445)
Q Consensus       102 gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~  181 (445)
                      ++..++. .......|++|+++++ +++.....+.++..+......          .+.+..+|+++.|+|+||.++.  
T Consensus        66 ~~~~~~~-~~~~~~~g~~il~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~v~~~Hl~~~~--  131 (256)
T 4fva_A           66 SLYKIYY-SNKGCQYYTAILVSKM-FDVEKHDVIHFQNSGMYRTLQ----------ILEGSIGGLKVFLLNTHLESTR--  131 (256)
T ss_dssp             GTEEEEE-SSTTSSSEEEEEEETT-CEEEEEEEEECTTCSSCCEEE----------EEEEEETTEEEEEEEEECCCSG--
T ss_pred             CCceEee-cCCCCCcceEEEEeec-ccceecccccCCCCcccceeE----------EEEEEeCCeEEEEEEecCCCCC--
Confidence            2323222 2345567999999888 888888777776544221111          1233346889999999997644  


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCC--
Q 013328          182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH--  259 (445)
Q Consensus       182 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~--  259 (445)
                      .....|..|+..+.+.+..+...  ..+.|+|+|||||..+.+...   ...|+.|+|...+.. ....+||....+.  
T Consensus       132 ~~~~~~~~q~~~~~~~~~~~~~~--~~~~~vIl~GDfN~~~~~~~~---~~~~~~d~~~~~~~~-~~~~~T~~~~~~~~~  205 (256)
T 4fva_A          132 EHRPQRCAQFGFCMDKVREIIAQ--NPGALVFFGGDLNLRDEEVSR---VPDGVKDAWEAAGSD-NKTKFTWDTFKNDNK  205 (256)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH--STTCEEEEEEECCCCGGGCCC---CCTTCEEHHHHTTCC-GGGCCSEETTTCCSS
T ss_pred             cchHHHHHHHHHHHHHhhhhhhc--cCCCcEEEeccCCCCcchhhh---hhcchhhHHHHhCCC-CCCCcccccccCccc
Confidence            34566888888888877766553  267899999999998766432   246888998876543 2235677554321  


Q ss_pred             ---CCcccccceeeecCCc
Q 013328          260 ---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       260 ---~~~~~rIDyi~~~~~~  275 (445)
                         .+...||||||+++..
T Consensus       206 ~~~~~~~~RiD~I~~~~~~  224 (256)
T 4fva_A          206 QGFHGAKMRFDRLYWSGPL  224 (256)
T ss_dssp             CSCCSCEECCEEEEEESSC
T ss_pred             ccCCCCCcCeEEEEEcCCc
Confidence               1224589999998754

>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*

Probab=99.93  E-value=9e-26  Score=209.22  Aligned_cols=210  Identities=15%  Similarity=0.118  Sum_probs=140.3

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccE
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  105 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  105 (445)
                      ...+||||||||++..              ...|..|.+.|+++|++.+|||||||||.   ......+...+.  .|.+
T Consensus         6 ~~~~l~v~swNi~g~~--------------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~---~~~~~~l~~~~~--~~~~   66 (256)
T 4gz1_A            6 DSSTISFITWNIDGLD--------------GCNLPERARGVCSCLALYSPDVVFLQEVI---PPYCAYLKKRAA--SYTI   66 (256)
T ss_dssp             GGGEEEEEEEECCTTC--------------CTTHHHHHHHHHHHHHHHCCSEEEEEEEC---HHHHHHHHHHCT--TEEE
T ss_pred             CCCcEEEEEEEcCCCc--------------CcCHHHHHHHHHHHHHHcCCCEEEEEcCC---HHHHHHHHhhcc--ccce
Confidence            3468999999998541              23578899999999999999999999993   233344444332  2333


Q ss_pred             EEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChh
Q 013328          106 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  185 (445)
Q Consensus       106 ~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~  185 (445)
                      ..   ....+.|.+++++..++++.......++.........          ...+..+|+.+.|+|+||.++.  ....
T Consensus        67 ~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~v~~~Hl~~~~--~~~~  131 (256)
T 4gz1_A           67 IT---GNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLL----------CVNVSLGGNEFCLMTSHLESTR--EHSA  131 (256)
T ss_dssp             EE---SCSSSSEEEEEEETTTEEEEEEEEEECTTCSSCCEEE----------EEEEEETTEEEEEEECBCCCSG--GGHH
T ss_pred             ee---ccccCCceEEEEEeccccceecccccCCcccccceEE----------EEEEEeCCEEEEEEeecccccc--cchh
Confidence            22   2344567788877776777766666554433211110          1223346889999999997643  3456


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccC-----CC
Q 013328          186 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRN-----HR  260 (445)
Q Consensus       186 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~-----~~  260 (445)
                      .|..|+..+++.+++.     ..+.|+|||||||..|.+..+..+...|+.++|...+.... ...+|....+     ..
T Consensus       132 ~~~~q~~~~~~~l~~~-----~~~~pvIl~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  205 (256)
T 4gz1_A          132 ERIRQLKTVLGKMQEA-----PDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKH-CQYTWDTKANNNLRIPA  205 (256)
T ss_dssp             HHHHHHHHHHHHHHHS-----CTTSEEEEEEECCCCHHHHHHHTCSCTTEEEHHHHTTCCGG-GSCSEETTTCCTTCCSS
T ss_pred             hhhHHHHHHhhhhhhc-----cCcceEEEeCccCCCcchhhhhhhccchhhhHHHHhcCCCC-CCcccccCCCCccccCC
Confidence            7888988888887653     25679999999999998888888778889988887654321 2234433221     12


Q ss_pred             CcccccceeeecCCc
Q 013328          261 GNICGVDFIWLLNPN  275 (445)
Q Consensus       261 ~~~~rIDyi~~~~~~  275 (445)
                      ....||||||+++..
T Consensus       206 ~~~~riD~I~~~~~~  220 (256)
T 4gz1_A          206 AYKHRFDRIFFRAEE  220 (256)
T ss_dssp             CCEECCEEEEEECC-
T ss_pred             CCCccEEEEEEECCc
Confidence            224589999997653

>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*

Probab=99.93  E-value=1.6e-25  Score=205.72  Aligned_cols=208  Identities=15%  Similarity=0.117  Sum_probs=137.2

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      .+||||||||++..              ...|..|.+.|+++|++.+|||||||||.   ......+...   .++.+++
T Consensus         2 ~~l~v~t~Ni~g~~--------------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~---~~~~~~l~~~---~~~~~~~   61 (250)
T 4f1h_A            2 SKLSIISWNVDGLD--------------TLNLADRARGLCSYLALYTPDVVFLQELI---PAYVQYLKKR---AVSYLFF   61 (250)
T ss_dssp             CCEEEEEEECCTTC--------------CTTHHHHHHHHHHHHHHHCCSEEEEEEEC---HHHHHHHHHH---CTTEEEE
T ss_pred             CeEEEEEEEeCCCC--------------CcCHHHHHHHHHHHHHHcCCCEEEEEeCC---HHHHHHHHHh---ccCceee
Confidence            57999999998541              23578899999999999999999999994   2333333332   3333333


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      .. ......|.+++.+++ ++++....+.++........ .         .+.....+..+.|+++|+.+..  .....|
T Consensus        62 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~v~~~hl~~~~--~~~~~r  127 (250)
T 4f1h_A           62 EG-SDDGYFTGIMLRKSR-VKFLESEIICFPTTQMMRNL-L---------IAQVTFSGQKLYLMTSHLESCK--NQSQER  127 (250)
T ss_dssp             ES-CSSSSEEEEEEETTT-CEEEEEEEEECTTCSSCCEE-E---------EEEEEETTEEEEEEECBCCCSG--GGHHHH
T ss_pred             cc-cccccCceeEEeecc-ccceecccccccCccccceE-E---------EEEEecCCcEEEEecccccccc--ccHHHH
Confidence            32 222333444444455 99998888876654322111 1         1233346889999999997643  345678


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccC-----CCCc
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRN-----HRGN  262 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~-----~~~~  262 (445)
                      ..|+..+++.+++.     ....|+|||||||+.+.+..+..+...++.++|...+... ....+|....+     ....
T Consensus       128 ~~q~~~~~~~l~~~-----~~~~pvIl~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  201 (250)
T 4f1h_A          128 TKQLRVVLQKIKEA-----PEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTVPYVS  201 (250)
T ss_dssp             HHHHHHHHHHHHHS-----CTTEEEEEEEECCCCHHHHHTTTSSCTTEEEHHHHTTCCG-GGCCSEETTTCCSSCCSSCC
T ss_pred             HHHHHHHHHHHHhc-----CCCCCEEEEEecCCCCcchhhhhhccccchHHHHHhcCCc-cCCcccccccCCCCCcCCCC
Confidence            88998888887653     2567999999999998887777777778888887765432 12233433221     1122


Q ss_pred             ccccceeeecCCc
Q 013328          263 ICGVDFIWLLNPN  275 (445)
Q Consensus       263 ~~rIDyi~~~~~~  275 (445)
                      ..||||||+++..
T Consensus       202 ~~riD~I~~~~~~  214 (250)
T 4f1h_A          202 RCRFDRIFLRSAK  214 (250)
T ss_dssp             EECCEEEEEECCT
T ss_pred             CccEEEEEEeCcc
Confidence            4589999998654

>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}

Probab=99.93  E-value=7.1e-26  Score=211.77  Aligned_cols=214  Identities=14%  Similarity=0.086  Sum_probs=142.4

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccCh-----------hhHHHHHHH
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGN-----------EELVDMYEK   96 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~-----------~~~~~~l~~   96 (445)
                      .+||||||||++..              ...+..|...|++.|+..+|||||||||....           +.+...+.+
T Consensus         2 ~~l~v~t~Ni~~~~--------------~~~~~~~~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~~~~~~~d~~~~~~~~   67 (266)
T 3teb_A            2 NAMKILTVNVHAWL--------------EENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVLLE   67 (266)
T ss_dssp             -CEEEEEEECCTTC--------------STTHHHHHHHHHHHHHHHTCSEEEEEEEEEETTSCEEETTEETTCHHHHHHH
T ss_pred             CceEEEEEeccccc--------------CcchhHHHHHHHHHHHhcCCCEEEEEEccccccccccccccccccHHHHHHH
Confidence            46999999998542              12456788999999999999999999995221           123333455


Q ss_pred             HhhccC---ccEEEe---cCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEE
Q 013328           97 RLSDAG---YVNFKL---ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILI  170 (445)
Q Consensus        97 ~l~~~g---y~~~~~---~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v  170 (445)
                      .|...+   |.+++.   ........|+||+  ++ +|++....+.++..++.....     .+....+++...++.+.|
T Consensus        68 ~l~~~~~~~y~~~~~~~~~~~~~~~~g~ail--sr-~~~~~~~~~~~~~~~~~~~~~-----~r~~~~~~~~~~~~~~~v  139 (266)
T 3teb_A           68 TLQKYTDTDYYLHWSNSHIGFGKYNEGVAVI--TR-HKIKAEDEFYCTFAQSVRTIS-----ARRIVSITINYEGQDIEF  139 (266)
T ss_dssp             HHTTTCCSCCEEEEEEEEECSTTEEEEEEEE--ES-SCCSEEEEEECSSCCCTTCTT-----CCEEEEEEEEETTEEEEE
T ss_pred             HHHHhCCCCeEEEEeccccCccccCCeEEEE--EC-ceecCceeEEeCCCCCCCCcc-----cceEEEEEEEeCCeEEEE
Confidence            555544   766532   1122334599999  77 898888888887643211100     011112334446899999


Q ss_pred             EEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCc--CcchhHhhhhCCCcccccccccCCCC
Q 013328          171 VNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK--RGHVYKFLRSQGFVSSYDTAHQYTDA  248 (445)
Q Consensus       171 ~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p--~s~~~~~l~~~g~~d~~~~~~~~~~~  248 (445)
                      +|+||.+...  ....|..|+..+.+.+++        +.|+|||||||+.|  .+..++.+.+.|+.|+|+..+...  
T Consensus       140 ~~~Hl~~~~~--~~~~r~~q~~~l~~~~~~--------~~~~il~GDfN~~~~~~~~~~~~l~~~~l~d~~~~~~~~~--  207 (266)
T 3teb_A          140 YSCHMNLPNC--ETEDMGKNIQTILNRTQN--------SNLKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEKKD--  207 (266)
T ss_dssp             EEEECCCTTC--TTCCHHHHHHHHHTSSCS--------CCEEEEEEECCCCTTTCHHHHHHHHTTTCEEHHHHCSEEC--
T ss_pred             EEecCCCccC--ChHHHHHHHHHHHHHHhc--------CCcEEEEeECCCCCCCCCcHHHhhccccccchHHhhcccc--
Confidence            9999977532  235688898888766542        57999999999999  899999998889999998876432  


Q ss_pred             CCCcceeccC---CCCcccccceeeecCCc
Q 013328          249 DAHKWVSHRN---HRGNICGVDFIWLLNPN  275 (445)
Q Consensus       249 ~~~t~~~~~~---~~~~~~rIDyi~~~~~~  275 (445)
                      ..+||.....   ......||||||+++..
T Consensus       208 ~~~t~~~~~~~~~~~~~~~riD~i~~s~~~  237 (266)
T 3teb_A          208 DGITVDKSIHGWDNDKAKKRLDYIFSNKEL  237 (266)
T ss_dssp             CCCCEECC------CTTEECCEEEEESSCC
T ss_pred             CCccccCccCCcCcCCcCCeeEEEEeCCCe
Confidence            2344422111   11234699999997644

>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3

Probab=99.92  E-value=1.4e-24  Score=207.16  Aligned_cols=219  Identities=14%  Similarity=0.129  Sum_probs=138.0

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCCh--hhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhh-ccC
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYW--FGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DAG  102 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w--~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~g  102 (445)
                      .+.+||||||||++..   ..        ....|  ..|.+.+...|...+|||||||||+..  .....+...|. .++
T Consensus         7 ~~~~lrv~t~Ni~~~~---~~--------~~~~~~~~~r~~~i~~~~~~~~~DIv~LQEv~~~--~~~~~l~~~l~~~~~   73 (301)
T 1zwx_A            7 YPGNFKITSHNVYLFS---RN--------IYPNWGQMHRADLIAQADYMKNNDVVILNEAFDT--SASHRLLNNLREMYP   73 (301)
T ss_dssp             CCCSCEEEEEEEEECC---TT--------TSTTSCHHHHHHHHHTSGGGSSCSEEEEEEECSH--HHHHHHHHHTTTTCC
T ss_pred             CCCceEEEEEECccCC---cc--------ccCCCCHHHHHHHHHHhhccCCCCEEEEeccccH--HHHHHHHHHHhhcCC
Confidence            4558999999999652   10        01235  568888888889999999999999522  22223333343 355


Q ss_pred             ccEEEecCC--------------CCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceE
Q 013328          103 YVNFKLART--------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEI  168 (445)
Q Consensus       103 y~~~~~~~~--------------~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  168 (445)
                      |.+.+.+..              .....|+||+  |+ +|++....+.++........     ..+.+..+++..+|+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~G~ail--Sr-~pi~~~~~~~~~~~~~~~~~-----~~r~~~~~~~~~~g~~~  145 (301)
T 1zwx_A           74 HQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVV--SQ-WPIVEKSQHIFQRGGGADRL-----SNKGFAYVKIMKNGKPY  145 (301)
T ss_dssp             EECCCTTSCSTTCSEEEC-----CCBCCCCEEE--ES-SCEEEEEEEECSCCCGGGGG-----BCCEEEEEEEEETTEEE
T ss_pred             ccccccCCccccccccccccccccccCCCEEEE--ec-CCcccceEEEecCCCCcccc-----cCCCeEEEEEEECCEEE
Confidence            543322211              1123699999  88 89998888877642100000     00011123333467899


Q ss_pred             EEEEeeeeCCCCC----CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhh-CCCc--ccccc
Q 013328          169 LIVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS-QGFV--SSYDT  241 (445)
Q Consensus       169 ~v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~-~g~~--d~~~~  241 (445)
                      .|+|+||.++...    .....|..|+..|.+++++..   ...+.|+|||||||+.|.+..|+.|.+ .++.  |+|..
T Consensus       146 ~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~---~~~~~pvIl~GDfN~~~~~~~~~~l~~~~~~~~~d~~~g  222 (301)
T 1zwx_A          146 HIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKN---IPKDEIIFIGGDLNVNYGTDEYHDMLKLLNVSSPANFNG  222 (301)
T ss_dssp             EEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT---CCTTSEEEEEEECCCCTTSHHHHHHHHHHTBCCCTTCCT
T ss_pred             EEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHHHhC---CCCCCeEEEEeeCCCCCCcHHHHHHHHHcCCCCCccccC
Confidence            9999999775321    245679999999988887642   124679999999999999999988865 3555  56552


Q ss_pred             cccCCCCCCCcceec-------cCCCCcccccceeeecCCc
Q 013328          242 AHQYTDADAHKWVSH-------RNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       242 ~~~~~~~~~~t~~~~-------~~~~~~~~rIDyi~~~~~~  275 (445)
                             ...||...       ..+.....||||||+++..
T Consensus       223 -------~~~T~~~~~n~~~~~t~~~~~~~rID~I~~~~~~  256 (301)
T 1zwx_A          223 -------QMATWDPTTNSMLKESYPKAAPEYLDYIFVENGH  256 (301)
T ss_dssp             -------TSCSBCTTTCHHHHHHCTTSCCBCCEEEEEBTTS
T ss_pred             -------CCceECCccCccccccCCCCCcceEeEEEEeCCC
Confidence                   13455310       0011225799999998753

>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}

Probab=99.92  E-value=2e-26  Score=245.11  Aligned_cols=200  Identities=22%  Similarity=0.369  Sum_probs=51.5

Q ss_pred             CceEEEeeccccccccCCCCc-cccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           28 PCITCTTFNILAPIYKRLSNE-NCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~-~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      ..++++||||++..|.....+ +|  ......|..|+..|++.|..++|||||||||+  ...+.+.+...|..+||.++
T Consensus       393 ~~~~~ls~Nil~~~~~~~~~~~~~--p~~~~~w~~R~~~i~~~I~~~~pDIIcLQEV~--~~~~~~~l~~~l~~~gY~~~  468 (727)
T 4b8c_D          393 RTFTVLSYNTLCQHYATPKMYRYT--PSWALSWDYRRNKLKEQILSYDSDLLCLQEVE--SKTFEEYWVPLLDKHGYTGI  468 (727)
T ss_dssp             ---------CCCGGGCCTTTCCSS--CHHHHSHHHHHHHHHHHHHHSCCSSEEEC-CC--HHHHHTTTCC-------CEE
T ss_pred             cceeeeeccccccccCcccccccc--chhhhhhhhhhhHHHHHHHHcCCCeEEEEecC--HHHHHHHHHHHHHhCCccEE
Confidence            468999999998766665443 23  22356899999999999999999999999994  33454555667777899988


Q ss_pred             EecCC---------CCCCceEEEEEecCcceEEeeEEEEecCCCCc----------eeeeecccccccccccccCCCCce
Q 013328          107 KLART---------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDR----------VAQLLHVELIDPFSQCRNGDLRQE  167 (445)
Q Consensus       107 ~~~~~---------~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~  167 (445)
                      +..+.         +..+.|+|||||.++|++++...+.|++....          ............+...+....|+.
T Consensus       469 ~~~~~~~~~~~~~~~~~~~G~AI~y~~srf~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~~~~l~~~~~g~~  548 (727)
T 4b8c_D          469 FHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDT  548 (727)
T ss_dssp             C----------------CCCCEEEC-------------------------------------------------------
T ss_pred             EeccCCcccccccCCCCcccEEEEEEcccceEeeeeEEeechhhhhchhhcccHHHHhhcccCCcEEEEEEEeecCCCce
Confidence            74332         34577999999988899999988877543211          000000000001111222346889


Q ss_pred             EEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcC-------CCCCcEEEeecCCCCcCcchhHhhhhC
Q 013328          168 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN-------LKPIPIILCGDWNGSKRGHVYKFLRSQ  233 (445)
Q Consensus       168 v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~-------~~~~pvIl~GDFN~~p~s~~~~~l~~~  233 (445)
                      |+|+||||.+.+  .....|..|+..++++++++.+...       ..+.|+|||||||+.|++.+|+.+...
T Consensus       549 l~V~ntHL~~~p--~~~~~R~~Qa~~l~~~l~~~~~~~~~~~~~~~~~~~pvIl~GDFNs~P~s~~~~~l~~~  619 (727)
T 4b8c_D          549 IWAVTTHLHWDP--KFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTG  619 (727)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             EEEEEeccccCC--CCCchHHHHHHHHHHHHHHHHHHhcccccccccCCCceEEecccCCCCCCcceEeeecC
Confidence            999999998854  3456799999999999988754321       246799999999999999999998543

>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A

Probab=99.91  E-value=3e-24  Score=206.48  Aligned_cols=224  Identities=13%  Similarity=0.131  Sum_probs=140.3

Q ss_pred             ccCCCCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhh-c
Q 013328           22 RDHQQQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-D  100 (445)
Q Consensus        22 ~~~~~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~  100 (445)
                      +...++.+||||||||+.+...         ......|..|.+.+...|...+|||||||||+..  .....+...|. .
T Consensus        22 ~~~~~~~~lrV~T~Ni~~~~~~---------~~~~~~~~~R~~~i~~~~~~~~pDIv~LQEv~~~--~~~~~l~~~L~~~   90 (317)
T 3i41_A           22 ESKKDDTDLKLVSHNVYMLSTV---------LYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDN--GASDKLLSNVKKE   90 (317)
T ss_dssp             ------CCCCEEEEEEEECCTT---------TSTTSCHHHHHHHHHHCSTTSSCSEEEEEEECSH--HHHHHHHHHTTTT
T ss_pred             CCCCCCCceEEEEEecccCccc---------cCCCccHHHHHHHHHHHhhccCCCEEEEEeeccH--HHHHHHHHHHHHh
Confidence            3444567899999999965211         1122358899999999998999999999999532  11233344444 3


Q ss_pred             cCccEEEecCCCC--------------CCceEEEEEecCcceEEeeEEEEecCCCC--ceeeeecccccccccccccCCC
Q 013328          101 AGYVNFKLARTNN--------------RGDGLLTAVHKDYFRVVNYRDLLFNDFGD--RVAQLLHVELIDPFSQCRNGDL  164 (445)
Q Consensus       101 ~gy~~~~~~~~~~--------------~~~G~ai~~~s~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  164 (445)
                      ++|.+...+....              ...|++|+  |+ +|++....+.++....  ....       +.+..+++...
T Consensus        91 ~py~~~~~g~~~~~~~~~~~~y~~~~~~~~G~~il--Sr-~Pi~~~~~~~~~~~~~~d~~~~-------r~~~~~~i~~~  160 (317)
T 3i41_A           91 YPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIV--SK-YPIKEKIQHVFKSGCGFDNDSN-------KGFVYTKIEKN  160 (317)
T ss_dssp             CCEECCCTTSCSTTCSEEEESCCSSCSBCCCCEEE--ES-SCEEEEEEEECSCCCSSGGGBC-------CEEEEEEEEET
T ss_pred             CCcccccCCccccCccCcccccccccccCCccEEE--eC-CCCccceeEECCCCCCcccccC-------cceEEEEEEEC
Confidence            5654322211110              11499999  88 9999888887765311  1110       11112334446


Q ss_pred             CceEEEEEeeeeCCCC----CCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhC-CCcccc
Q 013328          165 RQEILIVNTHLLFPHD----SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSY  239 (445)
Q Consensus       165 g~~v~v~n~HL~~~~~----~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~  239 (445)
                      |+.|.|+|+||.++..    ......|..|+..|.+++++...   ..+.|+|||||||+.|.+..++.|... ++.+.-
T Consensus       161 g~~v~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~~---~~~~pvIl~GDfN~~~~s~~~~~l~~~l~l~~~~  237 (317)
T 3i41_A          161 GKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNI---PKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVL  237 (317)
T ss_dssp             TEEEEEEEEECCCCCSSSCTTHHHHHHHHHHHHHHHHHHHHTC---CTTSCEEEEEECCCCTTSHHHHHHHHHHTBCCCE
T ss_pred             CEEEEEEEECCCCCCCCCcccccHHHHHHHHHHHHHHHHHhcc---CCCCeEEEEeECCCCCCCHHHHHHHHhcCCCCcc
Confidence            8899999999987542    12367899999999998887521   246899999999999999999998754 554431


Q ss_pred             cccccCCCCCCCcceeccC-------CCCcccccceeeecCCc
Q 013328          240 DTAHQYTDADAHKWVSHRN-------HRGNICGVDFIWLLNPN  275 (445)
Q Consensus       240 ~~~~~~~~~~~~t~~~~~~-------~~~~~~rIDyi~~~~~~  275 (445)
                      . .+     ...||....+       +.....||||||+++..
T Consensus       238 ~-~g-----~~~t~d~~~n~~~~~~~p~~~~~rLDyIlvs~~~  274 (317)
T 3i41_A          238 Y-AG-----HNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDH  274 (317)
T ss_dssp             E-EE-----CSCSBCTTTCHHHHHHCTTCCCBCCEEEEEBTTS
T ss_pred             c-CC-----CCcccCCCCCccccccCCCCCCcceEEEEEeCCc
Confidence            1 11     1234433211       11224599999998765

>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}

Probab=99.90  E-value=8e-23  Score=189.86  Aligned_cols=198  Identities=14%  Similarity=0.135  Sum_probs=125.7

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      ||||||||++                   |..|.+.+++.|++.+||||||||++.....+.   ...+...||.+++.+
T Consensus         1 lrv~t~Nv~~-------------------~~~~~~~i~~~i~~~~~DIv~LQE~~~~~~~~~---~~~~~~~gy~~~~~~   58 (256)
T 2jc4_A            1 MKITTWNVNS-------------------LNVRLPQVQNLLADNPPDILVLQELKLDQDKFP---AAALQMMGWHCVWSG   58 (256)
T ss_dssp             CEEEEEECSC-------------------HHHHHHHHHHHHHSSCCSEEEEECCCSCGGGSC---HHHHHTTTCEEEEEC
T ss_pred             CEEEEEEcCC-------------------cHHHHHHHHHHHHhcCCCEEEEEeeccchhcCC---HhHHhhcCCeEEECC
Confidence            6999999983                   345778999999999999999999975443221   233445688877653


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC--CChhh
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS--SLSLV  186 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~--~~~~~  186 (445)
                        .....|+||++  + +|+..... .++.. .+.....+.         +.+    +.+.|+|+|+.+....  .....
T Consensus        59 --~~~~~G~ails--r-~~~~~~~~-~~~~~~~~~~~~~~~---------~~~----~~~~v~~~h~~~~~~~~~~~~~~  119 (256)
T 2jc4_A           59 --QKTYNGVAIVS--R-SVPQDVHF-GLPALPDDPQRRVIA---------ATV----SGVRVINVYCVNGEALDSPKFKY  119 (256)
T ss_dssp             --CSSSCCEEEEE--S-SCCEEEEE-SCTTSTTCCSCCEEE---------EEE----TTEEEEEEECCCCCSTTSHHHHH
T ss_pred             --CCcceEEEEEE--C-CChHHhee-cCCCCccCCcCcEEE---------EEe----CCEEEEEEEecCCCCCCcHhHHH
Confidence              23456999994  4 45543322 23221 011111111         111    3699999999553321  11233


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--------------------hhHhhhhCCCcccccccccCC
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYKFLRSQGFVSSYDTAHQYT  246 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~~l~~~g~~d~~~~~~~~~  246 (445)
                      |..|++.|.+.+++...    .+.|+|||||||+.+.+.                    .++.+.+.|+.|+|+..++..
T Consensus       120 r~~~~~~l~~~~~~~~~----~~~~~il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~~~~~~~~  195 (256)
T 2jc4_A          120 KEQWFAALTEFVRDEMT----RHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEG  195 (256)
T ss_dssp             HHHHHHHHHHHHHHHHT----TCSSEEEEEECCCCCSGGGBSSGGGGTTCTTSCHHHHHHHHHHHTTTCEEHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHhc----CCCCEEEEeECCCCCchhhccChhHhCCCCCcCHHHHHHHHHHHhcCcEEhhhhhCCCC
Confidence            66777777777766532    578999999999988752                    245566789999998776432


Q ss_pred             CCCCCcceeccCC---CCcccccceeeecCC
Q 013328          247 DADAHKWVSHRNH---RGNICGVDFIWLLNP  274 (445)
Q Consensus       247 ~~~~~t~~~~~~~---~~~~~rIDyi~~~~~  274 (445)
                        ..+||.++...   .....||||||+++.
T Consensus       196 --~~~T~~~~~~~~~~~~~~~rID~i~~s~~  224 (256)
T 2jc4_A          196 --AFYTWFDYRGAMFQRKLGLRIDHILVSPA  224 (256)
T ss_dssp             --CCCCBCCTTTTHHHHTCCBCCEEEEECHH
T ss_pred             --CceeeEcCCCCccccCcEEEEEEEEECHH
Confidence              24677654321   112468999999654

>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X

Probab=99.89  E-value=9.8e-23  Score=194.64  Aligned_cols=218  Identities=15%  Similarity=0.147  Sum_probs=132.8

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCCh--hhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhh-ccC
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYW--FGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DAG  102 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w--~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~g  102 (445)
                      .+.+||||||||+...   ..        ....|  ..|.+.+...+...+|||||||||+..  .....+...|. .++
T Consensus         6 ~~~~lrv~t~Ni~~~~---~~--------~~~~~~~~~r~~~~~~~~~~~~~DIv~LQEv~~~--~~~~~l~~~l~~~~~   72 (306)
T 2ddr_A            6 QNDTLKVMTHNVYMLS---TN--------LYPNWGQTERADLIGAADYIKNQDVVILNEVFDN--SASDRLLGNLKKEYP   72 (306)
T ss_dssp             -CCEEEEEEEEEEECC---TT--------TCTTSCHHHHHHHHHHCSTTCSCSEEEEEEECCH--HHHHHHHHHHTTTCC
T ss_pred             CCCEEEEEEEECccCc---cc--------ccCCCCHHHHHHHHHHHhhccCCCEEEEEeecCH--HHHHHHHHHHhhhCC
Confidence            3468999999999652   10        01235  568888888888899999999999532  21223333333 244


Q ss_pred             ccEEEecC---------------CCCCCceEEEEEecCcceEEeeEEEEecCCC--CceeeeecccccccccccccCCCC
Q 013328          103 YVNFKLAR---------------TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGDLR  165 (445)
Q Consensus       103 y~~~~~~~---------------~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g  165 (445)
                      |.+.+.+.               ......|++|+  |+ +|+.....+.++...  +...       .+.+..+++...|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ail--Sr-~pi~~~~~~~~~~~~~~~~~~-------~r~~~~~~i~~~g  142 (306)
T 2ddr_A           73 NQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIV--SK-WPIAEKIQYVFAKGCGPDNLS-------NKGFVYTKIKKND  142 (306)
T ss_dssp             EECCCTTSCCSTTSSEEEESCCTTCSSCCCCEEE--ES-SCEEEEEEEECSCCC----CC-------CCEEEEEEEEETT
T ss_pred             ceeeccCcccccccccccccccccCccCCeEEEE--EC-CCcccccEEEcCCCCCcchhc-------CCCeEEEEEEeCC
Confidence            43211110               11234699999  88 899987777665421  0000       0011113333457


Q ss_pred             ceEEEEEeeeeCCCCC----CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCc------CcchhHhhhh-CC
Q 013328          166 QEILIVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK------RGHVYKFLRS-QG  234 (445)
Q Consensus       166 ~~v~v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p------~s~~~~~l~~-~g  234 (445)
                      +.+.|+|+||.++...    .....|..|+..|.+.+++..   ...+.|+|||||||+.|      .+..++.+.. .+
T Consensus       143 ~~~~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~---~~~~~pvil~GDfN~~~~~~d~~~s~~~~~l~~~~~  219 (306)
T 2ddr_A          143 RFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKN---IPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLN  219 (306)
T ss_dssp             EEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHHHHT---CCTTSCEEEEEECCCCCTTTSSCTTSHHHHHHHHHT
T ss_pred             EEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---CCCCCEEEEEeeCCCCcccccccCCHHHHHHHHhcC
Confidence            8999999999876421    245679999999988887641   11457999999999999      8888887764 35


Q ss_pred             CcccccccccCCCCCCCcceecc-------CCCCcccccceeeecCCc
Q 013328          235 FVSSYDTAHQYTDADAHKWVSHR-------NHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       235 ~~d~~~~~~~~~~~~~~t~~~~~-------~~~~~~~rIDyi~~~~~~  275 (445)
                      +.+.  ..  .  +...||....       .+.....||||||+++..
T Consensus       220 ~~~~--~~--~--g~~~T~~~~~n~~~~~t~~~~~~~rID~I~~s~~~  261 (306)
T 2ddr_A          220 ASVP--SY--T--GHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDH  261 (306)
T ss_dssp             BCCC--EE--E--ECSCSBCTTTCHHHHHHCTTSCCBCCEEEEEBTTS
T ss_pred             CCCc--cc--C--CCCcccCCCCCccccccCCCCCcceeeEEEEeCCC
Confidence            5431  11  1  1245664211       011225699999998764

>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1

Probab=99.89  E-value=2.3e-23  Score=194.95  Aligned_cols=204  Identities=17%  Similarity=0.185  Sum_probs=127.1

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      ||||||||++..                   .|.+.|++.|...+||||||||++.....+.   ...+...||.+++.+
T Consensus         1 lrv~t~Nv~~~~-------------------~~~~~i~~~i~~~~~Dii~LQE~~~~~~~~~---~~~l~~~gy~~~~~~   58 (268)
T 1ako_A            1 MKFVSFNINGLR-------------------ARPHQLEAIVEKHQPDVIGLQETKVHDDMFP---LEEVAKLGYNVFYHG   58 (268)
T ss_dssp             CEEEEEECSCGG-------------------GCHHHHHHHHHHHCCSEEEEECCCCCGGGCC---HHHHHHTTCEEEEEE
T ss_pred             CEEEEEehhHHH-------------------HHHHHHHHHHHHcCCCEEEEEeccCChhhCC---HhHhccCCCcEEEeC
Confidence            699999998441                   2567899999999999999999975443221   223334588877653


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC---CChhh
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS---SLSLV  186 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~---~~~~~  186 (445)
                        .....|+||++|.   ++.... ..++.....        ....+..+++...++.+.|+|+|+.+....   .....
T Consensus        59 --~~~~~G~ailsr~---~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~  124 (268)
T 1ako_A           59 --QKGHYGVALLTKE---TPIAVR-RGFPGDDEE--------AQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPA  124 (268)
T ss_dssp             --ETTEEEEEEEESS---CCSEEE-ESSTTCCHH--------HHTTEEEEEEEETTEEEEEEEEECCCCCBTTCTTHHHH
T ss_pred             --CCCcceEEEEEec---Ccceee-eCCCCcccc--------cCCCEEEEEEEcCCCeEEEEEEEecCCCCcccchhHHH
Confidence              2334699999544   443322 112211000        000111123333467999999999764321   11235


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchh--------------------------HhhhhCCCccccc
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVY--------------------------KFLRSQGFVSSYD  240 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~--------------------------~~l~~~g~~d~~~  240 (445)
                      |..|+..+.+.+++..    ..+.|+|||||||+.|.+..+                          +.+.+.|+.|+|+
T Consensus       125 r~~~~~~l~~~~~~~~----~~~~~~Il~GDFN~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~gl~D~~~  200 (268)
T 1ako_A          125 KAQFYQNLQNYLETEL----KRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFR  200 (268)
T ss_dssp             HHHHHHHHHHHHHHHC----CTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBTTSCHHHHHHHHHHHHTTEEEHHH
T ss_pred             HHHHHHHHHHHHHHhh----hCCCCEEEEeECCCCCchhcccCcccChhhhccCCCcCcCHHHHHHHHHHhcCCCEEeEh
Confidence            7788888877777642    256899999999998876443                          3355679999998


Q ss_pred             ccccCCCCCCCcceeccCC---CCcccccceeeecCC
Q 013328          241 TAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNP  274 (445)
Q Consensus       241 ~~~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~  274 (445)
                      ..++... ..+||.+....   .....||||||+++.
T Consensus       201 ~~~~~~~-~~~T~~~~~~~~~~~~~~~riD~il~s~~  236 (268)
T 1ako_A          201 HANPQTA-DRFSWFDYRSKGFDDNRGLRIDLLLASQP  236 (268)
T ss_dssp             HHSTTCC-SCCSBCCTTTTHHHHTCCBCCEEEEEEHH
T ss_pred             hhCCCCC-CCeeEeCCcCCccccCceEEEEEEEeCHH
Confidence            8765322 24676554311   012469999999654

>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A

Probab=99.88  E-value=3.2e-22  Score=187.25  Aligned_cols=202  Identities=18%  Similarity=0.232  Sum_probs=124.4

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHH-HHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      +|||+||||++..                   .+.+ .++++|+..+||||||||++.....+...   .....||..++
T Consensus         3 ~l~i~s~Nv~g~~-------------------~~~~~~l~~~i~~~~~DIv~LQEt~~~~~~~~~~---~~~~~gy~~~~   60 (265)
T 3g91_A            3 VLKIISWNVNGLR-------------------AVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRK---LRHVEGYRSFF   60 (265)
T ss_dssp             EEEEEEEECSCHH-------------------HHHHHTHHHHHHHHCCSEEEEECCCSCGGGSCHH---HHCCTTCEEEE
T ss_pred             ccEEEEEEcCCch-------------------hhhhhhHHHHHHhcCCCEEEEEeccccccccChh---hhcccCCcEEE
Confidence            6999999998552                   1122 48999999999999999997554333222   22246898777


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC-CChh
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS-SLSL  185 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~-~~~~  185 (445)
                      .........|+||++|.....+...    +... .+..+..+.+             ....+.|+|+|+...... ....
T Consensus        61 ~~~~~~~~~Gvail~k~~~~~~~~~----~~~~~~d~~gr~i~~-------------~~~~~~i~~vy~p~~~~~~~~~~  123 (265)
T 3g91_A           61 TPAERKGYSGVAMYTKVPPSSLREG----FGVERFDTEGRIQIA-------------DFDDFLLYNIYFPNGAMSEERLK  123 (265)
T ss_dssp             ECBSSTTSCCEEEEESSCCSEEECC----CSCHHHHSBSCEEEE-------------ECSSCEEEEEECCCCTTCHHHHH
T ss_pred             ccCCCCCcCEEEEEEecChHHhccC----CCCcccCCcCCEEEE-------------EeCCEEEEEEEecCCCCCchhHH
Confidence            6554455569999965542222110    1100 0111111111             235799999988443211 1122


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------chhHhhhhCCCcccccccccC
Q 013328          186 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQY  245 (445)
Q Consensus       186 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~  245 (445)
                      .|..+...+.+.++....    .+.|+|||||||..+..                    ..++.+.+.|++|+|+..++.
T Consensus       124 ~r~~~~~~l~~~~~~~~~----~~~~~ii~GDfN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~D~~r~~~p~  199 (265)
T 3g91_A          124 YKLEFYDAFLEDVNRERD----SGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSD  199 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHH----TTCCEEEEEECCCCCSGGGBSCTGGGTTSTTSCHHHHHHHHHHHHTTEEETHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHc----CCCCEEEECccccCCchhhccCHhhcCCCCccCHHHHHHHHHHHhcCcEEeeHhhCCC
Confidence            355666666666666543    46899999999987753                    234455578999999988754


Q ss_pred             CCCCCCcceeccCC---CCcccccceeeecCCc
Q 013328          246 TDADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       246 ~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      ..  .+||.+....   .....||||||+++..
T Consensus       200 ~~--~yT~~~~~~~~~~~~~~~rID~il~s~~~  230 (265)
T 3g91_A          200 PG--QYTWWSYRTRARERNVGWRLDYFFVNEEF  230 (265)
T ss_dssp             SC--CCSBCCSSTTTTTTTCCBCCEEEEEEGGG
T ss_pred             CC--CCCCcCCCCCccccCceEEEEEEEECHHH
Confidence            32  5677665432   1224599999997654

>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis}

Probab=99.87  E-value=3.8e-22  Score=185.61  Aligned_cols=197  Identities=14%  Similarity=0.205  Sum_probs=118.4

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHH-HHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEe
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKL  108 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~  108 (445)
                      |||+||||+...                   .+.+ .+++.|+..+||||||||++.....+...   .....||.+++.
T Consensus         2 l~v~t~Ni~~~~-------------------~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~---l~~~~gy~~~~~   59 (259)
T 2jc5_A            2 LKIISANVNGIR-------------------SAYKKGFYEYIAASGADIVCVQELKAQEADLSAD---MKNPHGMHGHWH   59 (259)
T ss_dssp             EEEEEEECSSHH-------------------HHHHTTHHHHHHHTTCSEEEEECCCCCGGGCCHH---HHSGGGCEEEEE
T ss_pred             cEEEEEeeccHH-------------------HHHHhHHHHHHHhcCCCEEEEEEecchhhccChh---hccccCCeEEEe
Confidence            899999998542                   1123 49999999999999999997544332221   222357877765


Q ss_pred             cCCCCCCceEEEEEecCcceEEeeEEEEecCCC-CceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          109 ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       109 ~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      ........|+||++|.   ++..... .++... +..+..+.         +.    .+.+.|+|+|+.+...   ...|
T Consensus        60 ~~~~~~~~G~ailsr~---~~~~~~~-~~~~~~~~~~~r~~~---------~~----~~~~~v~~~h~~~~~~---~~~r  119 (259)
T 2jc5_A           60 CAEKRGYSGVAVYSKR---KPDNVQI-GMGIEEFDREGRFVR---------CD----FGRLSVISLYLPSGSS---AEER  119 (259)
T ss_dssp             CCSSTTCCCEEEEESS---CCSEEEE-SCSCHHHHTTCCEEE---------EE----ETTEEEEEEECCCCTT---CHHH
T ss_pred             ccCCCCcceEEEEEec---CceeEEe-CCCCCccCCCCeEEE---------EE----cCCEEEEEEeccCCCC---CcHH
Confidence            4333344699999544   4443322 121100 00111111         11    2479999999966432   1234


Q ss_pred             H----HHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--------------------hhH-hhhhCCCccccccc
Q 013328          188 L----HQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYK-FLRSQGFVSSYDTA  242 (445)
Q Consensus       188 ~----~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~-~l~~~g~~d~~~~~  242 (445)
                      .    .|+..+.+.+++..+    .+.|+|||||||+.|.+.                    .+. .+...|+.|+|+..
T Consensus       120 ~~~~~~~~~~l~~~~~~~~~----~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~d~~~~~  195 (259)
T 2jc5_A          120 QQVKYRFLDAFYPMLEAMKN----EGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTL  195 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----TCSEEEEEEECCCCCSGGGBSCSTTCTTSTTSCHHHHHHHHHHHHTTCCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh----cCCCEEEEeeCCCCCchhhccChhhcCCCCCcCHHHHHHHHHHhccCCcEEeeHhh
Confidence            3    456666666655432    468999999999987541                    123 33377999999876


Q ss_pred             ccCCCCCCCcceeccCC---CCcccccceeeecCC
Q 013328          243 HQYTDADAHKWVSHRNH---RGNICGVDFIWLLNP  274 (445)
Q Consensus       243 ~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~  274 (445)
                      ++.+  ..+||++..+.   .....||||||+++.
T Consensus       196 ~~~~--~~~T~~~~~~~~~~~~~~~rID~i~~s~~  228 (259)
T 2jc5_A          196 YPDV--PGYTWWSNRGQAYAKDVGWRIDYQMVTPE  228 (259)
T ss_dssp             CTTC--CCCCEESCSSHHHHTTCEECCEEEEECHH
T ss_pred             CCCC--CCccEECCcCCCccCCCeeEEEEEEECHH
Confidence            6432  24788765421   112369999999754

>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A

Probab=99.87  E-value=1.3e-21  Score=179.49  Aligned_cols=194  Identities=16%  Similarity=0.185  Sum_probs=117.8

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      .+|||+||||++..                 ...|+..+++.|++.+||||||||++.....+.     .+...||.+++
T Consensus         6 ~~lri~t~Nv~g~~-----------------~~~~~~~~~~~i~~~~~DIv~LQE~~~~~~~~~-----~l~~~~y~~~~   63 (238)
T 1vyb_A            6 SHITILTLNINGLN-----------------SAIKRHRLASWIKSQDPSVCCIQETHLTCRDTH-----RLKIKGWRKIY   63 (238)
T ss_dssp             CCEEEEEEECSCCC-----------------SHHHHHHHHHHHHHHCCSEEEEECCCCCTTSGG-----GCCCTTCCEEE
T ss_pred             CcceEEEEecccCC-----------------chhhHHHHHHHHHHcCCCEEEEecccCCCCCch-----hHhhCCCCeEE
Confidence            47999999998442                 123567899999999999999999964332221     12234777655


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      .........|+||++|.+ +++.... ... +...+.   +.         +++...++.+.|+|+|+....    .   
T Consensus        64 ~~~~~~~~~Gvail~r~~-~~~~~~~-~~~-~~~~r~---i~---------~~~~~~~~~~~v~~~y~p~~~----~---  121 (238)
T 1vyb_A           64 QANGKQKKAGVAILVSDK-TDFKPTK-IKR-DKEGHY---IM---------VKGSIQQEELTILNIYAPNTG----A---  121 (238)
T ss_dssp             EECCSSSSCCEEEEECTT-CCCEEEE-EEE-CTTSSE---EE---------EEEEETTEEEEEEEEECCSSS----H---
T ss_pred             EccCCCCCceEEEEEeCC-CCccccc-eeE-cCCCcE---EE---------EEEEeCCCcEEEEEEecCCCC----c---
Confidence            433233456999998766 3332111 111 111111   11         122235789999999984321    1   


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcch-------------h-HhhhhCCCcccccccccCCCCCCCcc
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHV-------------Y-KFLRSQGFVSSYDTAHQYTDADAHKW  253 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~-------------~-~~l~~~g~~d~~~~~~~~~~~~~~t~  253 (445)
                      ..+.+.+.+.+.+.      .+.|+|||||||+.+.+..             + +.+.+.|+.|+|+..++.  ...+||
T Consensus       122 ~~~~~~l~~~l~~~------~~~~~Il~GDFN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~--~~~~T~  193 (238)
T 1vyb_A          122 PRFIKQVLSDLQRD------LDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPK--STEYTF  193 (238)
T ss_dssp             HHHHHHHHHHTTTT------CCTTEEEEEECSSCSSGGGBTTCCCCCHHHHHHHHHHHHTTEEEHHHHHCTT--CCCCSE
T ss_pred             HHHHHHHHHHHHhc------cCCCEEEEccCCCCCCccccCCCCCCcHHHHHHHHHHhhCCCEEhhHhhCCC--CCceeE
Confidence            12333333333321      4579999999999876421             2 234467999999876543  235788


Q ss_pred             eeccCCCCcccccceeeecCCc
Q 013328          254 VSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       254 ~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                      .+...  +...||||||+++..
T Consensus       194 ~~~~~--~~~~rID~i~~s~~~  213 (238)
T 1vyb_A          194 FSAPH--HTYSKIDHIVGSKAL  213 (238)
T ss_dssp             EETTT--TEEECCEEEEEEGGG
T ss_pred             EcCCC--CcccceEEEEeCHHH
Confidence            76552  235699999997654

>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}

Probab=99.87  E-value=2.3e-21  Score=180.26  Aligned_cols=199  Identities=18%  Similarity=0.211  Sum_probs=117.6

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      |||+||||++..                   .|.+.+++.|++.+||||||||++.....+..   ..+...||.+++.+
T Consensus         2 lrv~t~Nv~g~~-------------------~~~~~i~~~i~~~~~Dii~lQE~~~~~~~~~~---~~~~~~gy~~~~~~   59 (257)
T 2voa_A            2 LKIATFNVNSIR-------------------SRLHIVIPWLKENKPDILCMQETKVENRKFPE---ADFHRIGYHVVFSG   59 (257)
T ss_dssp             EEEEEEECSCGG-------------------GTHHHHHHHHHHHCCSEEEEECCCCCGGGCCH---HHHHTTTCEEEEEE
T ss_pred             eEEEEEecCChH-------------------HHHHHHHHHHhhcCCCEEEEEEeecchhhcCH---HHhhhCCCcEEEcC
Confidence            899999998431                   13478999999999999999999754322211   12334688776543


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC--CChhhH
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS--SLSLVR  187 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~--~~~~~R  187 (445)
                        .....|+||++|.   |+.... ..++..+......+.         +.+    +.+.|+|+|+......  .....|
T Consensus        60 --~~~~~G~ailsr~---~~~~~~-~~~~~~~~~~~r~l~---------~~~----~~~~v~~~h~p~~~~~~~~~~~~r  120 (257)
T 2voa_A           60 --SKGRNGVAIASLE---EPEDVS-FGLDSEPKDEDRLIR---------AKI----AGIDVINTYVPQGFKIDSEKYQYK  120 (257)
T ss_dssp             --ETTEEEEEEEESS---CCEEEE-ESCSSSSCCGGGEEE---------EEE----TTEEEEEEECCCCSCTTSHHHHHH
T ss_pred             --CCCccEEEEEEcc---ChHHhe-ecCCCCccccCcEEE---------EEE----CCEEEEEEEeCCCCCCCcHHHHHH
Confidence              2233599999544   444322 122211000111111         111    3799999999442210  011223


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--------------------hhHhhhhCCCcccccccccCCC
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYKFLRSQGFVSSYDTAHQYTD  247 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~~l~~~g~~d~~~~~~~~~~  247 (445)
                      ..++..|.+.+++..    ..+.|+|||||||+.|.+.                    .++.+.+.|+.|+|+..++.. 
T Consensus       121 ~~~~~~l~~~~~~~~----~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~~~~~p~~-  195 (257)
T 2voa_A          121 LQWLERLYHYLQKTV----DFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILELGFVDVLRKIHPNE-  195 (257)
T ss_dssp             HHHHHHHHHHHHHHC----CTTSCEEEEEECSCCCSGGGBSCGGGCTTSTTTCHHHHHHHHHHHTTTCEEHHHHHSTTC-
T ss_pred             HHHHHHHHHHHHHHh----cCCCCEEEEeeCCCCCchhhccChhHhCCCCCCCHHHHHHHHHHHHcCcEeeehhhCCCC-
Confidence            344555555555432    2567999999999886542                    234455789999998776542 


Q ss_pred             CCCCcceec-cCC---CCcccccceeeecCCc
Q 013328          248 ADAHKWVSH-RNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       248 ~~~~t~~~~-~~~---~~~~~rIDyi~~~~~~  275 (445)
                       ..+||.+. ...   .....||||||+++..
T Consensus       196 -~~~T~~~~~~~~~~~~~~~~rID~i~~s~~~  226 (257)
T 2voa_A          196 -RIYTFYDYRVKGAIERGLGWRGDAILATPPL  226 (257)
T ss_dssp             -CCCSBCCTTSTTTTTTTCCBCCEEEEECHHH
T ss_pred             -CCcceeccccCCceecCceEEEEEEEECHHH
Confidence             35777765 321   1224699999996543

>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A

Probab=99.85  E-value=4.8e-21  Score=181.11  Aligned_cols=205  Identities=15%  Similarity=0.172  Sum_probs=118.0

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhHHH-HHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCc-
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-  103 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy-  103 (445)
                      ...+||||||||++..                   .+.. .+++.|++.+||||||||++.....+..   .+....|| 
T Consensus        25 ~~~~l~v~t~Ni~~~~-------------------~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~---~l~~~~gy~   82 (285)
T 2o3h_A           25 KPATLKIASWNVDGLR-------------------AWIKKKGLDWVKEEAPDILCLQETKCSENKLPA---ELQELPGLS   82 (285)
T ss_dssp             CBCCEEEEEEECSSHH-------------------HHHHTTHHHHHHHHCCSEEEEECCCCCTTSCCG---GGGGCGGGC
T ss_pred             CccceEEEEEecccCh-------------------hhhhhhHHHHHHhcCCCEEEEEEeecchhhccH---HHHhccCCc
Confidence            4457999999998542                   0112 2899999999999999999754322211   11123577 


Q ss_pred             cEEEec-CCCCCCceEEEEEecCcceEEeeEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC
Q 013328          104 VNFKLA-RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS  181 (445)
Q Consensus       104 ~~~~~~-~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~  181 (445)
                      ..++.. .......|+||++|...+.+..    .++.. .+.....+.         +    ..+.+.|+|+|+......
T Consensus        83 ~~~~~~~~~~~g~~Gvailsr~~~~~~~~----~~~~~~~~~~~r~l~---------~----~~~~~~v~~~h~p~~~~~  145 (285)
T 2o3h_A           83 HQYWSAPSDKEGYSGVGLLSRQCPLKVSY----GIGDEEHDQEGRVIV---------A----EFDSFVLVTAYVPNAGRG  145 (285)
T ss_dssp             EEEEECBC--CCSCCEEEEESSCCSEEEE----SCSCGGGSSBCCEEE---------E----ECSSCEEEEEECCCCCGG
T ss_pred             EEEEecccCCcccceEEEEEccChHHeee----ccCCcccCCCCcEEE---------E----EeCCEEEEEEEcCCCCCc
Confidence            344433 2222235999996544332221    11100 011111111         1    135799999998432211


Q ss_pred             -CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------chh-HhhhhCCCcccc
Q 013328          182 -SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVY-KFLRSQGFVSSY  239 (445)
Q Consensus       182 -~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~-~~l~~~g~~d~~  239 (445)
                       .....|..|+..|.+.++.+.     ...|+|||||||+.+..                    ..+ +.+...||.|+|
T Consensus       146 ~~~~~~r~~~~~~l~~~l~~~~-----~~~p~Il~GDFN~~~~~~D~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~D~~  220 (285)
T 2o3h_A          146 LVRLEYRQRWDEAFRKFLKGLA-----SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSF  220 (285)
T ss_dssp             GTTHHHHHHHHHHHHHHHHHHH-----TTSCEEEEEECSCCCSGGGBSCTTTCTTSTTSCHHHHHHHHHHHHHTTCEEHH
T ss_pred             chhHHHHHHHHHHHHHHHHhhc-----cCCCEEEEEECCCCCchhhccChhhcCCCCCcCHHHHHHHHHHHhcCCCEEEE
Confidence             112346677787877777653     34799999999986532                    122 444456999999


Q ss_pred             cccccCCCCCCCcceeccCC---CCcccccceeeecCCc
Q 013328          240 DTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       240 ~~~~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      +..++... ..+||.+....   .....||||||+++..
T Consensus       221 ~~~~~~~~-~~~T~~~~~~~~~~~~~~~rID~i~~s~~~  258 (285)
T 2o3h_A          221 RHLYPNTP-YAYTFWTYMMNARSKNVGWRLDYFLLSHSL  258 (285)
T ss_dssp             HHHCTTCC-SCCSBCCSSTTHHHHTCCBCCEEEEECGGG
T ss_pred             EecCCCCC-CcEeEecCcCCccccCceeEEEEEEECHHH
Confidence            87754321 13677665421   0124699999997654

>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A

Probab=99.85  E-value=4.1e-21  Score=184.65  Aligned_cols=206  Identities=15%  Similarity=0.188  Sum_probs=115.4

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCc-c
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-V  104 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy-~  104 (445)
                      ...+||||||||++...                +  ....++++|...+||||||||++.....+...+.   ...|| .
T Consensus        58 ~~~~lrv~t~Nv~g~~~----------------~--~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~l~---~~~gy~~  116 (318)
T 1hd7_A           58 KPATLKICSWNVDGLRA----------------W--IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQ---ELPGLSH  116 (318)
T ss_dssp             CBCCEEEEEEECSSHHH----------------H--HHTTHHHHHHHHCCSEEEEECCCCCC--------------CCCE
T ss_pred             CCCceEEEEEecCcchh----------------h--hhhhHHHHHHhhCCCEEEEEEccCchhhccHHHH---hcCCCce
Confidence            44579999999985420                0  0113899999999999999999754432222222   23477 4


Q ss_pred             EEEecCC-CCCCceEEEEEecCcceEEeeEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCC-
Q 013328          105 NFKLART-NNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS-  181 (445)
Q Consensus       105 ~~~~~~~-~~~~~G~ai~~~s~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~-  181 (445)
                      .++.... .....|+||++|..   ++.... .++.. .+.....+.         +.    .+.+.|+|+|+...... 
T Consensus       117 ~~~~~~~~~~g~~Gvailsr~~---~~~~~~-~~~~~~~~~~~r~l~---------~~----~~~~~v~~vh~p~~~~~~  179 (318)
T 1hd7_A          117 QYWSAPSDKEGYSGVGLLSRQC---PLKVSY-GIGDEEHDQEGRVIV---------AE----FDSFVLVTAYVPNAGRGL  179 (318)
T ss_dssp             EEEECC-----CCCEEEEESSC---CSEEEE-SCSCGGGSSSSCEEE---------EE----CSSCEEEEEECCCCCGGG
T ss_pred             EEEecCCCCCccceEEEEEcCC---ceeEEe-cCCCcccCCCCcEEE---------EE----cCCEEEEEEEcCCCCCcc
Confidence            4443312 22235999995544   332211 11110 011111111         11    25799999998432211 


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc--------------------hh-HhhhhCCCccccc
Q 013328          182 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VY-KFLRSQGFVSSYD  240 (445)
Q Consensus       182 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~-~~l~~~g~~d~~~  240 (445)
                      .....|..|+..|.+.++.+..     ..|+|||||||+.+.+.                    .+ ..+...||.|+|+
T Consensus       180 ~~~~~r~~~~~~l~~~l~~~~~-----~~pvIl~GDFN~~~~~~D~~~~~~~~~~~g~~~~~~~~~~~~ll~~~l~D~~r  254 (318)
T 1hd7_A          180 VRLEYRQRWDEAFRKFLKGLAS-----RKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR  254 (318)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHH-----HSCEEEEEECSCCCSGGGBSCHHHHTTSTTSCHHHHHHHHHHHHHTTCEEHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhccc-----CCCEEEEeeCCCCChhhhccChhhcCCCCCcCHHHHHHHHHHHhhCCCEEeeh
Confidence            1123467788888888876543     26899999999876431                    12 4445669999998


Q ss_pred             ccccCCCCCCCcceeccCC---CCcccccceeeecCCc
Q 013328          241 TAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       241 ~~~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      ..++... ..+||.+....   .....||||||+++..
T Consensus       255 ~~~p~~~-~~~T~~~~~~~~~~~~~~~rID~il~s~~~  291 (318)
T 1hd7_A          255 HLYPNTP-YAYTFWTYMMNARSKNVGWRLDYFLLSHSL  291 (318)
T ss_dssp             HHCTTCT-TCCSBCCSGGGHHHHTCCBCCEEEEECGGG
T ss_pred             hhCCCCC-CCcceECCcCCCcccCCceEEEEEEECHHH
Confidence            7764321 23677665421   1124699999997654

>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}

Probab=99.85  E-value=7.9e-21  Score=190.12  Aligned_cols=222  Identities=15%  Similarity=0.130  Sum_probs=123.3

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhH-HHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhh-ccCc
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGR-NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DAGY  103 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R-~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~gy  103 (445)
                      ....|||+||||++..                .|..| ...|+++|...+||||||||++.....+..  ...|. ..||
T Consensus       146 ~~~~LKI~TwNVnGl~----------------~~~kr~~~~i~~~I~~~~pDIVcLQEtk~~~~~~~~--~~~la~~~GY  207 (467)
T 2j63_A          146 PSRMYKFITWNVAGLR----------------GLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADA--NATLGVVDGY  207 (467)
T ss_dssp             TTTEEEEEEEECSCHH----------------HHHHHCTTHHHHHHHHHCCSEEEEECCCCCTTCHHH--HHTSSCCTTE
T ss_pred             CCCCeEEEEEEcCCCc----------------ccccccHHHHHHHHHHcCCCEEEEEecccchhccch--HHHHhhcCCc
Confidence            3457999999998552                01111 157999999999999999999754433322  12233 3588


Q ss_pred             cEEEecCC-CCCCceEEEEEecCcce--EE--eeEEEEecC----------------CCCceeeeecccccccccccccC
Q 013328          104 VNFKLART-NNRGDGLLTAVHKDYFR--VV--NYRDLLFND----------------FGDRVAQLLHVELIDPFSQCRNG  162 (445)
Q Consensus       104 ~~~~~~~~-~~~~~G~ai~~~s~~~~--i~--~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~  162 (445)
                      .+++.... .....|+|||+|...++  +.  ....+.++.                ..+..++.+         .+.+.
T Consensus       208 ~~~~~~~~~~~g~~GVAIlsR~pi~~~~l~~~~~~~~~~p~~~~~~~~~gs~~~~~~~~D~egR~I---------~a~~~  278 (467)
T 2j63_A          208 SFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGDEEGRVL---------TTFLS  278 (467)
T ss_dssp             EEEEECCSSSTTSCCEEEEEECCCCCCTSCCEEEESSCCCCC-----------CCCCCCCTTCCEE---------EEEEC
T ss_pred             eEEEecccCCCCcceEEEEEeCCccccccceeeeeccccccccccccccccccccccccCCCCcEE---------EEEEE
Confidence            77665432 23346999997765210  00  111111110                001111111         12333


Q ss_pred             CCC------ceEEEEEeeeeCCCC-CCChhhHHHHH-HHHHHHHHHHHHHc--------------CCCCCcEEEeecCCC
Q 013328          163 DLR------QEILIVNTHLLFPHD-SSLSLVRLHQV-YKILQHVESYQKEH--------------NLKPIPIILCGDWNG  220 (445)
Q Consensus       163 ~~g------~~v~v~n~HL~~~~~-~~~~~~R~~q~-~~l~~~l~~~~~~~--------------~~~~~pvIl~GDFN~  220 (445)
                      ..+      ..|.|+|+|+..... ......|..+. ..|.+.++++....              ...+.|+|||||||.
T Consensus       279 ~~g~~~~~~~~~~vinvYlP~~~~~~~r~~~K~~~~~~~L~~~l~~l~~~~~~~~~~r~~~a~g~~~~~~pvIL~GDFN~  358 (467)
T 2j63_A          279 PDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDTWATENAAVPSAAAMGSGSSPHGFIWAGDLNV  358 (467)
T ss_dssp             SSCCC----CCEEEEEEECCCCCTTSTTHHHHHHTHHHHHHHHHHHHHHHHTTTTC----------CCSCEEEEEEECCC
T ss_pred             eCCcccccCceEEEEEEECCCCCcchHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhhhcccccCCcEEEeccccC
Confidence            344      789999998844221 11112233222 44555555543100              013579999999998


Q ss_pred             CcCcch-----------------------h-HhhhhCCCcccccccccCCCCCCCcceeccCC---CCcccccceeeecC
Q 013328          221 SKRGHV-----------------------Y-KFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLN  273 (445)
Q Consensus       221 ~p~s~~-----------------------~-~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~  273 (445)
                      .|.+..                       + +.|...||+|+|+..++... ..+||.++...   .....||||||+++
T Consensus       359 ~p~~~D~~~~~~~~~~~~~~gf~~~er~~~~~lL~~~gL~DafR~~~p~~~-~~yTw~s~r~~~~~~n~g~RIDyIlvS~  437 (467)
T 2j63_A          359 AERDYDRYYAGTFKSMQECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAG-PVYSFWSQRINGRPRNLGWRLDYFVVSS  437 (467)
T ss_dssp             CCSTTSBCCCSCHHHHTTSTTSCHHHHHHHHHHHHHTTEEEHHHHHCTTBC-SCCSBCCTTTTTTTTTCCBCCEEEEEEG
T ss_pred             CCchhhhccccchhhcccccccCHHHHHHHHHHHhhCCCEEehHhhCCCCC-CCccccCCCCCcccCCCCceeEEEEEcH
Confidence            765321                       1 22335799999998765321 24677665421   12256999999976


Q ss_pred             Cc
Q 013328          274 PN  275 (445)
Q Consensus       274 ~~  275 (445)
                      ..
T Consensus       438 ~l  439 (467)
T 2j63_A          438 RL  439 (467)
T ss_dssp             GG
T ss_pred             HH
Confidence            54

>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1

Probab=99.81  E-value=3.9e-19  Score=164.19  Aligned_cols=189  Identities=14%  Similarity=0.101  Sum_probs=104.0

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      ...|||+||||+...                   .+...++++|++.+||||||||++......   ..   ...||.++
T Consensus        17 ~~~lri~s~Nv~~~~-------------------~~~~~l~~~i~~~~~DIv~lQE~~~~~~~~---~~---~~~gy~~~   71 (245)
T 1wdu_A           17 GPPYRVLQANLQRKK-------------------LATAELAIEAATRKAAIALIQEPYVGGAKS---MK---GFRGVRVF   71 (245)
T ss_dssp             -CCEEEEEEECTTCH-------------------HHHHHHHHHHHHHTCSEEEEESCCC---------C---CCSSCEEE
T ss_pred             CcceeeeeeeccccH-------------------HHHHHHHHHHhhcCCCEEEEEcccccCCcc---cc---CCCcceEe
Confidence            347999999999441                   145789999999999999999996432211   11   12477665


Q ss_pred             EecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhh
Q 013328          107 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLV  186 (445)
Q Consensus       107 ~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~  186 (445)
                      +.........|+||+++++++++..     ++....+....           +.+...++.+.|+|+|+....   .   
T Consensus        72 ~~~~~~~~~~GvaIl~~~~~~~~~~-----~~~~~~~~~~~-----------~~i~~~~~~~~v~~vy~p~~~---~---  129 (245)
T 1wdu_A           72 QSTAQGDGTVKAAIAVFDHDLDVIQ-----YPQLTTNNIVV-----------VGIRTRAWEITLVSYYFEPDK---P---  129 (245)
T ss_dssp             ECCCCTTCCCCEEEEECCSSCEEEE-----CTTTCCSSEEE-----------EEEECSSCEEEEEEEECCTTS---C---
T ss_pred             ccccccCCCCCeEEEEECCCcceEE-----ecccccCCEEE-----------EEEEcCCCcEEEEEEEeCCCC---C---
Confidence            4332223346999998765577642     11111111111           222234678999999984321   1   


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc-----------hhHhhhhCCCcccccccccCCCCCCCccee
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH-----------VYKFLRSQGFVSSYDTAHQYTDADAHKWVS  255 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~-----------~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~  255 (445)
                      +.....    .+..+.+..  ...|+|||||||+.+...           ..+.+...|+.    ..+   ....+||.+
T Consensus       130 ~~~~~~----~l~~~~~~~--~~~~~Ii~GDfN~~~~~~~~~~~~~~~~~l~~~~~~~~l~----~~~---~~~~~T~~~  196 (245)
T 1wdu_A          130 IESYLE----QIKRVERKM--GPKRLIFGGDANAKSTWWGSKEDDARGDQLMGTLGELGLH----ILN---EGDVPTFDT  196 (245)
T ss_dssp             SHHHHH----HHHHHHHTT--CSSSEEEEEECCCCCGGGTCSSCCHHHHHHHHHHHHHTCE----ECC---CSCCCSEEC
T ss_pred             HHHHHH----HHHHHHHHh--CCCcEEEEeccccCcccCCCCCcCcchHHHHHHHHHCCcE----Eec---CCCCCcEEC
Confidence            111222    222222222  457999999999976421           11122233432    111   123478876


Q ss_pred             ccCCCCcccccceeeecCCc
Q 013328          256 HRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       256 ~~~~~~~~~rIDyi~~~~~~  275 (445)
                      +........||||||+++..
T Consensus       197 ~~~~~~~~~rID~i~~s~~~  216 (245)
T 1wdu_A          197 IRGGKRYQSRVDVTFCTEDM  216 (245)
T ss_dssp             -----CCEECCEEEEECGGG
T ss_pred             CCCCCCCCCEEEEEEeChHH
Confidence            54322235799999997654

>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*

Probab=99.81  E-value=1e-18  Score=162.97  Aligned_cols=204  Identities=14%  Similarity=0.117  Sum_probs=113.4

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc--CCCcEEEEeecccChhhHHHHHHHHhhc---cCcc
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY--ERSSIICLQEFWVGNEELVDMYEKRLSD---AGYV  104 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~--~~~DII~LQEv~~~~~~~~~~l~~~l~~---~gy~  104 (445)
                      |||+||||+++.  . .           .|  |...+++.|.+  .+|||||||||..........+...|..   .+|.
T Consensus         1 lrv~s~NI~~~g--~-~-----------~~--~~~~~~~~i~~~~~~~DIv~LQEv~~~~~~~~~~l~~~L~~~~~~~y~   64 (260)
T 2a40_B            1 LKIAAFNIRTFG--E-T-----------KM--SNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYH   64 (260)
T ss_dssp             CEEEEEEEEEES--H-H-----------HH--HSHHHHHHHHHHHTTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCE
T ss_pred             CEEEEEehhhhC--C-C-----------cc--chHHHHHHHHHHhccCCEEEEEEEEcCchhHHHHHHHHHHhccCCCcE
Confidence            699999999641  0 0           01  22334444443  2899999999964322223344555532   3477


Q ss_pred             EEEecCCCC--CCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccccccc--ccccCC-CCceEEEEEeeeeCCC
Q 013328          105 NFKLARTNN--RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFS--QCRNGD-LRQEILIVNTHLLFPH  179 (445)
Q Consensus       105 ~~~~~~~~~--~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~g~~v~v~n~HL~~~~  179 (445)
                      ++...+.+.  .+.+++++|++.++.++...  .++..+..... ...  .+...  ...... .|++|+|+|+||.+. 
T Consensus        65 ~v~~~~~~~~~~~~~~~~ly~~~~v~~~~~~--~~~~~~~~~~~-~~~--~R~p~~~~~~~~~~~g~~~~vi~~Hl~~~-  138 (260)
T 2a40_B           65 YVVSEPLGRNSYKERYLFLFRPNKVSVLDTY--QYDDGCESCGN-DSF--SREPAVVKFSSHSTKVKEFAIVALHSAPS-  138 (260)
T ss_dssp             EEECCCBCSSSCCBEEEEEECTTTCEEEEEE--ECCTTSTTTHH-HHC--SSCCEEEEEECTTSSSSEEEEEECCCCGG-
T ss_pred             EEEcccCCCCCCcEEEEEEEcCceeEecCce--eccCCCcCCCC-Cce--eeCCEEEEEEeCCCCCceEEEEEecCCCC-
Confidence            776544332  44579999999888877653  33332110000 000  00101  111122 278999999999542 


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcC---cchhHh---hhhCCCcccccccccCCCCCCCcc
Q 013328          180 DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR---GHVYKF---LRSQGFVSSYDTAHQYTDADAHKW  253 (445)
Q Consensus       180 ~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~---s~~~~~---l~~~g~~d~~~~~~~~~~~~~~t~  253 (445)
                            .+.+|++.+.+.++.+.+..  +..|+|||||||+.+.   +..++.   +...|+..  ..    .....+++
T Consensus       139 ------~~~~q~~~l~~~~~~~~~~~--~~~~vil~GDfN~~~~~~~~~~~~~l~~~~~~~~~~--~~----~~~~~t~~  204 (260)
T 2a40_B          139 ------DAVAEINSLYDVYLDVQQKW--HLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQW--LI----PDSADTTA  204 (260)
T ss_dssp             ------GHHHHHHHHHHHHHHHHHHH--CCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTTEEE--SS----CTTCCCBS
T ss_pred             ------CcHHHHHHHHHHHHHHHHhC--CCCCEEEEecCCCCCcccccchhhheeeeccCCceE--cc----cCCCCCcc
Confidence                  23456777777666554332  4679999999999988   655554   33345431  11    01111222


Q ss_pred             eeccCCCCcccccceeeecCCc
Q 013328          254 VSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       254 ~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                       .     +..++|||||+++..
T Consensus       205 -~-----~~~~~lD~I~~s~~~  220 (260)
T 2a40_B          205 -T-----STNCAYDRIVVAGSL  220 (260)
T ss_dssp             -S-----SCCCCCEEEEEESHH
T ss_pred             -c-----CCCCCcccEEEcchH
Confidence             1     224689999997653

>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}

Probab=99.74  E-value=2.4e-17  Score=151.50  Aligned_cols=173  Identities=9%  Similarity=0.062  Sum_probs=102.7

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEe
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKL  108 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~  108 (445)
                      .|||+||||+...                   .|.+.++++|++.+||||||||++.              ..||. + .
T Consensus         7 ~mki~s~Nvn~~r-------------------~~~~~l~~~l~~~~~DIl~LQEt~~--------------~~gy~-~-~   51 (240)
T 2ei9_A            7 RLRIGQINLGGAE-------------------DATRELPSIARDLGLDIVLVQEQYS--------------MVGFL-A-Q   51 (240)
T ss_dssp             EEEEEEEECTTCH-------------------HHHHTHHHHHHHHTCSEEEEESCCT--------------TSSSE-E-C
T ss_pred             cceEEEEecCccH-------------------HHHHHHHHHHHHcCCCEEEeecceE--------------cCCce-E-e
Confidence            5999999998542                   2557799999999999999999941              12666 2 2


Q ss_pred             cCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhHH
Q 013328          109 ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRL  188 (445)
Q Consensus       109 ~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R~  188 (445)
                         .....|+||+++++..++....     ...+.....+.           +  .+..++|+|+|+  |++. ....+.
T Consensus        52 ---~~~~~gvail~~~~~~~~~~~~-----~~~~~~~~~i~-----------i--~~~~i~i~svY~--P~~~-~~~~~~  107 (240)
T 2ei9_A           52 ---CGAHPKAGVYIRNRVLPCAVLH-----HLSSTHITVVH-----------I--GGWDLYMVSAYF--QYSD-PIDPYL  107 (240)
T ss_dssp             ---CSSSCSEEEEESSTTSCEEECG-----GGCCSSEEEEE-----------E--TTTTEEEEEEEC--CTTS-CSHHHH
T ss_pred             ---ccCCCCEEEEEecCCcceeeec-----ccCCCCEEEEE-----------E--eeccEEEEEEEc--CCCC-chhHHH
Confidence               2245799999887545553211     11111111111           1  235799999977  3332 112222


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc----------------hhHhhhhCCCccccccc--ccCCCCCC
Q 013328          189 HQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH----------------VYKFLRSQGFVSSYDTA--HQYTDADA  250 (445)
Q Consensus       189 ~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~----------------~~~~l~~~g~~d~~~~~--~~~~~~~~  250 (445)
                             ++++.+....  .+.|+|||||||+.+...                ..+.|  .++.++++..  ++  +...
T Consensus       108 -------~~l~~l~~~~--~~~~~Ii~GDfN~~~~~w~~~~~~~~~~~~~r~~~~~~l--~~~~d~~~l~~~~~--~~~~  174 (240)
T 2ei9_A          108 -------HRLGNILDRL--RGARVVICADTNAHSPLWHSLPRHYVGRGQEVADRRAKM--EDFIGARRLVVHNA--DGHL  174 (240)
T ss_dssp             -------HHHHHHHHHT--TTSCEEEEEECCCCCGGGTCCHHHHSSSCHHHHHHHHHH--HHHHHHTTCEECCC--TTCC
T ss_pred             -------HHHHHHHHhc--CCCcEEEEEecccccccccCCCCCCCCcchhhHHHHHHH--HHHHHhcCCEecCC--CCCC
Confidence                   2333322221  246999999999976421                11122  2566666633  32  1235


Q ss_pred             CcceeccCCCCcccccceeeecCCccc
Q 013328          251 HKWVSHRNHRGNICGVDFIWLLNPNKY  277 (445)
Q Consensus       251 ~t~~~~~~~~~~~~rIDyi~~~~~~~~  277 (445)
                      +||.+...    ..||||+|+++....
T Consensus       175 ~T~~s~~~----~~rID~~l~s~~l~~  197 (240)
T 2ei9_A          175 PTFSTANG----ESYVDVTLSTRGVRV  197 (240)
T ss_dssp             CSEEETTE----EECCEEEEECTTCCE
T ss_pred             ceEeCCCC----ceEEEEEEecCcccc
Confidence            78876542    579999999876543

>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1

Probab=99.65  E-value=1.2e-16  Score=143.51  Aligned_cols=191  Identities=11%  Similarity=0.068  Sum_probs=111.2

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCC-CcEEEEeecccC------h-----hhHHHHHH
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYER-SSIICLQEFWVG------N-----EELVDMYE   95 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~-~DII~LQEv~~~------~-----~~~~~~l~   95 (445)
                      ..+||||||++....           ....+|.   ..+.+.|...+ +|||+|||+...      .     ....+ ..
T Consensus        14 ~~~kV~TwNiqgs~~-----------~teskw~---~~v~~lI~~~~~~DIvaLQEag~~p~sa~~t~R~~~~~g~~-v~   78 (262)
T 2f1n_A           14 TDFRVATWNLQGASA-----------TTESKWN---INVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIP-VR   78 (262)
T ss_dssp             GGCCEEEEEEEECTT-----------SCHHHHH---THHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCC-CE
T ss_pred             ceeEEEEEEcCCCCC-----------CCccccc---ccHHHHHccCCCCCEEEEeecCCcCcccccccccccCCCcC-HH
Confidence            469999999996421           1112342   34556888888 999999999622      0     00011 22


Q ss_pred             HHhhccC------ccEEEecCC--CCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCce
Q 013328           96 KRLSDAG------YVNFKLART--NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQE  167 (445)
Q Consensus        96 ~~l~~~g------y~~~~~~~~--~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  167 (445)
                      +.+...|      +.++|..+.  +....|+||+  |+ +++.  ..+.++......         ++....++    +.
T Consensus        79 E~~w~lGt~srp~~~yiY~~~~D~~~~r~nlAIl--Sr-~~ad--ev~vLp~~~~~~---------Rp~lgiri----~~  140 (262)
T 2f1n_A           79 ELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALV--SN-RRAD--EVFVLSPVRQGG---------RPLLGIRI----GN  140 (262)
T ss_dssp             EEEEECCSSSSSCEEEEEEECSCSSSCSSCEEEE--ES-SCCS--EEEEECCSSTTC---------CCEEEEEE----TT
T ss_pred             HHHHHhCCCCCCceEEEEEeeccCCCCceeeEEE--Ec-cccc--ceEECCCCCCCC---------CceEEEEE----CC
Confidence            2233344      666665543  2355699999  77 6766  333344322111         11111222    35


Q ss_pred             EEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCC-----CcEEEeecCCCCcCcchhHhhhhCCCccccccc
Q 013328          168 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP-----IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA  242 (445)
Q Consensus       168 v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~-----~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~  242 (445)
                      +.++|+|+.+..    ...|.+|+..+.+.+...      ..     .|+||+||||..|++...++...  ....+..+
T Consensus       141 ~~ff~tHa~a~~----g~da~a~v~~I~~~~~~~------~~~~~~~~pwii~GDFNr~P~sl~~~l~~~--~~~~~~~~  208 (262)
T 2f1n_A          141 DAFFTAHAIAMR----NNDAPALVEEVYNFFRDS------RDPVHQALNWMILGDFNREPADLEMNLTVP--VRRASEII  208 (262)
T ss_dssp             EEEEEEECCSSS----SCSHHHHHHHHHHHHHTC------SSHHHHTCEEEEEEECSSCHHHHHTTSCHH--HHHTEEEE
T ss_pred             EEEEEEEecCCC----CccHHHHHHHHHHHHhcC------cccccCCCcEEEEecCCCCCcchhhhhhcc--cccceEEc
Confidence            999999997753    244778877777776541      33     59999999999999988775432  11112222


Q ss_pred             ccCCCCCCCcceeccCCCCcccccceeeecCC
Q 013328          243 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNP  274 (445)
Q Consensus       243 ~~~~~~~~~t~~~~~~~~~~~~rIDyi~~~~~  274 (445)
                      .    +...|..+       ..+|||+|++++
T Consensus       209 ~----p~~~T~~s-------~~~LDY~~~~~~  229 (262)
T 2f1n_A          209 S----PAAATQTS-------QRTLDYAVAGNS  229 (262)
T ss_dssp             C----CSSCSBTT-------SCCCEEEEEEES
T ss_pred             C----CCCCCCCC-------CCeEeEEEEcCC
Confidence            1    12233211       457999999754

>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B

Probab=99.61  E-value=2e-15  Score=137.36  Aligned_cols=196  Identities=13%  Similarity=0.031  Sum_probs=103.0

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc-CCCcEEEEeecccChhh--HHHHH-H-------HH
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY-ERSSIICLQEFWVGNEE--LVDMY-E-------KR   97 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~-~~~DII~LQEv~~~~~~--~~~~l-~-------~~   97 (445)
                      .+||+||||++.. +.          ..   .++...++++|.. .+|||++|||+......  ....+ .       +.
T Consensus         4 ~~kv~TwNi~g~~-~~----------~~---~k~~~~i~~~i~~~~~~DIlaLQEa~~~p~~~~~~~r~~~~~g~~v~e~   69 (261)
T 1sr4_B            4 DFKVATWNLQGSS-AV----------NE---SKWNINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEY   69 (261)
T ss_dssp             GSCEEEEECCCCS-SS----------SH---HHHHHHHHHHHCSTTCCSEEEEESCCSCCTTCEECSCCCCCSSSCCEEE
T ss_pred             ccEEEEEEcCCCC-CC----------Ch---hhhhhHHHHHHcCCCCCCEEEEecCCCCCCccccchhhhcccCCchhhh
Confidence            6899999999532 10          00   1122368889999 78999999999642111  00000 0       01


Q ss_pred             hhcc------CccEEEecC--CCCCCceEEEEEecCcceEEeeEEEEecC--CCCceeeeecccccccccccccCCCCce
Q 013328           98 LSDA------GYVNFKLAR--TNNRGDGLLTAVHKDYFRVVNYRDLLFND--FGDRVAQLLHVELIDPFSQCRNGDLRQE  167 (445)
Q Consensus        98 l~~~------gy~~~~~~~--~~~~~~G~ai~~~s~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~  167 (445)
                      +.+.      ++.++|..+  .+....|+||+  || +++.+...+..+.  ...+...           .++  .++  
T Consensus        70 ~w~lg~~~r~~~~yiy~~~~d~~~g~~g~AIl--SR-~~~~~v~~l~~~~~~~~~R~~l-----------~i~--i~g--  131 (261)
T 1sr4_B           70 TWNLGTRSRPNMVYIYYSRLDVGANRVNLAIV--SR-RQADEAFIVHSDSSVLQSRPAV-----------GIR--IGT--  131 (261)
T ss_dssp             EEESSCSSSCCEEEEEEECCCTTTSCSCEEEE--ES-SCCSEEEEECCCCCSSCCCCEE-----------EEE--ETT--
T ss_pred             hhhcccccCCCceEEEEEeecCCCCccceEEE--Ec-cchhceEEcCCCCCCCcCcceE-----------EEE--ECC--
Confidence            0001      334444433  23445699999  66 5654433333222  1111111           122  223  


Q ss_pred             EEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCC---CcEEEeecCCCCcCcchhHhhhhCCCc-ccccccc
Q 013328          168 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP---IPIILCGDWNGSKRGHVYKFLRSQGFV-SSYDTAH  243 (445)
Q Consensus       168 v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~---~pvIl~GDFN~~p~s~~~~~l~~~g~~-d~~~~~~  243 (445)
                      +.|+++|+.+..    ...+..|+..+.+.+.....   .+.   .|+||+||||..|.+ ....|....+. ..+....
T Consensus       132 ~~f~s~Hl~~~~----~~ea~~~v~~I~~~~~~~~~---~~~~~~~~~ii~GDFN~~p~~-~~~~L~~~~~~~~~~~~~~  203 (261)
T 1sr4_B          132 DVFFTVHALATG----GSDAVSLIRNIFTTFNSSSS---PPERRVYSWMVVGDFNRAPAN-LEVALRQEPAVSENTIIIA  203 (261)
T ss_dssp             EEEEEEECCTTT----TTTHHHHHHHHHHHHHC------CGGGGGCEEEEEEECSSCHHH-HHHHHTTSHHHHHTCEEEC
T ss_pred             eEEEEeCCCCCC----CchHHHHHHHHHHHHHhccc---CCcccCCcEEEEeeCCCChhH-HHHHhhccccccceeEecC
Confidence            999999996633    23466666666665543200   012   699999999999766 34444321111 0111111


Q ss_pred             cCCCCCCCcceeccCCCCcccccceeeecCCc
Q 013328          244 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       244 ~~~~~~~~t~~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                          +...|+++       ...||||++++..
T Consensus       204 ----p~~~T~~s-------~~~LDyi~~~~~~  224 (261)
T 1sr4_B          204 ----PTEPTHRS-------GNILDYAILHDAH  224 (261)
T ss_dssp             ----CSSCSBTT-------SCCCEEEEEECTT
T ss_pred             ----CCcCcCCC-------CCcccEEEecCCC
Confidence                12344432       2469999997655

>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X*

Probab=99.53  E-value=4.1e-15  Score=139.84  Aligned_cols=174  Identities=11%  Similarity=0.021  Sum_probs=94.0

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcE--EEEeecccCh------hhHHHHHHHHhh
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSI--ICLQEFWVGN------EELVDMYEKRLS   99 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DI--I~LQEv~~~~------~~~~~~l~~~l~   99 (445)
                      -+|+|+||||++..   ..       ...       ..++..|...+|||  |||||+....      ..+.+.+.+.|.
T Consensus         7 ~~i~V~T~Nv~~~~---~~-------~~l-------~~wl~~~~~~~pDI~viglQEv~~~~~~~~~~~~w~~~l~~~L~   69 (282)
T 2imq_X            7 LSVHTVSWNSGHER---AP-------TNL-------EELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSLLT   69 (282)
T ss_dssp             EEEEEEEEEEETCC---CC-------SCC-------HHHHTCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHHHHH
T ss_pred             cEEEEEEEeCCCCc---Cc-------hhH-------HHHhcccccCCCCEEEEEeeeeccccccchhhHHHHHHHHHhcC
Confidence            46999999998542   10       011       22222344689996  5999996332      235666777787


Q ss_pred             ccCccEEEecCCCCCCceEEEEEecCcceEEeeEEEE-ecC-CCCceeeeecccccccccccccCCCCceEEEEEeeeeC
Q 013328          100 DAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLL-FND-FGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLF  177 (445)
Q Consensus       100 ~~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~  177 (445)
                      .++|..+.....+..+..++|++|...++.+...... +.. .+.+.+.           ..++...+..|+++|+||.+
T Consensus        70 ~~~Y~~v~~~~~~~~G~~l~vf~k~~~~~~i~~~~~~~~~g~~g~kGav-----------~~r~~~~~~~~~fvn~HL~~  138 (282)
T 2imq_X           70 SKGYTKLKNTITETMGLTVYCLEKHLDQNTLKNETIIVTVDDQKKSGGI-----------VTSFTIYNKRFSFTTSRMSD  138 (282)
T ss_dssp             HTTEEEEEEEECSSEEEEEEEEGGGCCTTTCCCEEEEEECSTTSCSEEE-----------EEEEEETTEEEEEEEEECCT
T ss_pred             CCceEEEEeccCceeEEEEEEEEccccCccceeeeeccccccccCCceE-----------EEEEEECCEEEEEEEECCCC
Confidence            6667665431111122344555444433333322211 111 1111111           13333467899999999977


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcC---cchhHhhhhCCCc
Q 013328          178 PHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR---GHVYKFLRSQGFV  236 (445)
Q Consensus       178 ~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~---s~~~~~l~~~g~~  236 (445)
                      ...  ....|..+++.+++.+...     ....|+|++||||..++   +.+.+.+.+..+.
T Consensus       139 ~~~--~~~~R~~~~~~I~~~~~~~-----~~~~~vi~~GDfN~r~~~~~~~~~~~i~~~~~~  193 (282)
T 2imq_X          139 EDV--TSTNTKYAYDTRLDYSKKD-----DPSDFLFWIGDLNVRVETNATHAKSLVDQNNID  193 (282)
T ss_dssp             TCC--CTTSSSSSCCGGGCTTSSS-----SCCSEEEEEEECSCCBCSCHHHHHHHHHTTCHH
T ss_pred             CCc--hHHHHHHHHHHHHHhhhcc-----CccceEEEecccccccCCCHHHHHHHHhhccHH
Confidence            422  2344666766665544321     24568999999996654   3455555444433

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.47  E-value=4.2e-14  Score=111.04  Aligned_cols=66  Identities=23%  Similarity=0.374  Sum_probs=61.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +...+++++|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.+++.+|.|+||.|+|+||++.|
T Consensus        33 ~~~~el~~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           33 DELEEIREAFKVFDRDGN-GFISKQELGTAMRSLG-----YMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             GGHHHHHHHHHHTCSSCS-SCBCHHHHHHHHHHHT-----CCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            455678999999999999 9999999999999999     78999999999999999999999999999654

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.37  E-value=3.8e-13  Score=105.31  Aligned_cols=70  Identities=14%  Similarity=0.132  Sum_probs=61.0

Q ss_pred             hhccchHHHhccccc-cCCCCCcccHHHHHHHHHH-h----ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-L----NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-~----g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.|| +||++|+|+.+||+.+|+. +    |     ..++++++++||+++|.|+||.|+|+||+..|.
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg-----~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~   80 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTP-----TEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA   80 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCC-----CTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcC-----CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            456678999999998 8875499999999999996 4    5     678899999999999999999999999997664


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus        81 ~   81 (101)
T 3nso_A           81 C   81 (101)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A*

Probab=99.33  E-value=9.6e-12  Score=119.40  Aligned_cols=172  Identities=15%  Similarity=0.147  Sum_probs=94.1

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc---CCCcE--EEEeeccc-Ch-----------hhH
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY---ERSSI--ICLQEFWV-GN-----------EEL   90 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~---~~~DI--I~LQEv~~-~~-----------~~~   90 (445)
                      -.+.|+||||.+...    .                ..|.++|..   ..|||  |||||+.. ..           ..+
T Consensus        25 ~~i~v~TwNv~g~~~----~----------------~~l~~~L~~~~~~~~DI~viglQEiv~l~~~~~~~~~~~~~~~w   84 (347)
T 1i9z_A           25 VKIFVASYNLNGCSA----T----------------TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRREW   84 (347)
T ss_dssp             EEEEEEEEECTTCCC----C----------------SCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHHHH
T ss_pred             cEEEEEeEecCCCCC----c----------------hhHHHHhccccCCCCCEEEEEeEEeecCchhhhcccCchhHHHH
Confidence            469999999985521    0                125666764   68999  99999832 11           134


Q ss_pred             HHHHHHHhhc-----cCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCC--CceeeeecccccccccccccCC
Q 013328           91 VDMYEKRLSD-----AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGD  163 (445)
Q Consensus        91 ~~~l~~~l~~-----~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  163 (445)
                      .+.+...|..     .+|..+..  ..-.+.+++||+|....+.+.........++  ...+       ......+++..
T Consensus        85 ~~~i~~~L~~~~~~~~~Y~~v~s--~~l~g~~L~Vfvr~~~~~~i~~v~~~~v~tG~~g~~g-------nKGav~vr~~~  155 (347)
T 1i9z_A           85 ESCVKRLLNGKCTSGPGYVQLRS--GQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSG-------NKGAVAIRFDY  155 (347)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEEEE--EEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC-----------CCEEEEEEEEE
T ss_pred             HHHHHHHHhhcccCCCceeEEEE--eeccceEEEEEEehHhhhhccceeeeeEeccCCCccC-------CCceEEEEEEE
Confidence            5566667753     34544322  2223558888877764432221111111111  0000       00111133445


Q ss_pred             CCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCC---CCcCcchhHhh
Q 013328          164 LRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWN---GSKRGHVYKFL  230 (445)
Q Consensus       164 ~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN---~~p~s~~~~~l  230 (445)
                      .+..|+++|+||.+..  .....|..+...+++.+.-.....-....++|++||||   +.+.+.+.+.+
T Consensus       156 ~~~~l~fvn~HLaa~~--~~~~~R~~d~~~I~~~l~f~~~~~i~~~d~v~~~GDlNyRi~~~~~~v~~~i  223 (347)
T 1i9z_A          156 EDTGLCFITSHLAAGY--TNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFGDFNYRISLTYEEVVPCI  223 (347)
T ss_dssp             TTEEEEEEEEECCCCS--SCHHHHHHHHHHHHHHCCCGGGCCTTSSSEEEEEEECCCCBSSCHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCC--ccHHHHHHHHHHHHHhhccCcccccccCccEEEecccccccCCCHHHHHHHH
Confidence            6789999999997743  33456888888877654311000001346899999999   43443444433

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.31  E-value=4.8e-12  Score=108.40  Aligned_cols=84  Identities=15%  Similarity=0.378  Sum_probs=70.0

Q ss_pred             HHHHHHHHHhh----hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC--CCCce
Q 013328          287 EAVFGMFKCLL----RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI--DGNGV  360 (445)
Q Consensus       287 ~~v~~~~~~~~----~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~--~~~g~  360 (445)
                      ..|+.++....    ......++++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.|++.+|.  |+||.
T Consensus        66 ~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~ls~~e~~~l~~~~D~~~d~dG~  139 (159)
T 3i5g_C           66 EEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQ-GLISSAEIRNVLKMLG-----ERITEDQCNDIFTFCDIREDIDGN  139 (159)
T ss_dssp             HHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSS-SEECHHHHHHHHHHSS-----SCCCHHHHHHHHHHTTCCCCSSCC
T ss_pred             HHHHHHHHHhhcccccchHHHHHHHHHHHhcCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCcCCCCCCe
Confidence            44555554433    2334679999999999999 9999999999999999     88999999999999995  88999


Q ss_pred             eeHHHHHHHHhccCcc
Q 013328          361 VDYKEFQQRIWKTTWS  376 (445)
Q Consensus       361 i~~~eF~~~~~~~~~~  376 (445)
                      |+|+||++.|+.....
T Consensus       140 I~~~EF~~~m~~~p~p  155 (159)
T 3i5g_C          140 IKYEDLMKKVMAGPFP  155 (159)
T ss_dssp             EEHHHHHHHHHHCSCC
T ss_pred             EeHHHHHHHHHCCCCC
Confidence            9999999888765543

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.31  E-value=3.7e-13  Score=129.87  Aligned_cols=122  Identities=15%  Similarity=0.226  Sum_probs=100.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      .++..+++++|+.||.|++ |.|+.+||+.+|+.+|     ..+++++++++++.+|.|+||.|+|+||+..+...    
T Consensus       298 ~EEI~ELREaF~~fDkDgd-G~IS~eELk~aLrsLG-----~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~  371 (440)
T 3u0k_A          298 EEQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT  371 (440)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHHHHcCCCC-CEECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence            4677889999999999999 9999999999999999     78999999999999999999999999999766432    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             ..|...|.+.+|.++..|....+..+|..++...     +..  ..+.+|.+.||.|+-
T Consensus       372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeE-----Ide--Lfke~D~DgDGkIsy  430 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVNY  430 (440)
T ss_dssp             --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCTTCSSSEEH
T ss_pred             ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEeH
Confidence                   1345667888888888887777777776655443     232  445788899998863

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.30  E-value=5.4e-12  Score=106.59  Aligned_cols=66  Identities=27%  Similarity=0.484  Sum_probs=61.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....++.+|+.||.|++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.|+||.|+|+||++.|.
T Consensus        81 ~~~~l~~aF~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGD-GFISPAELRFVMINLG-----EKVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             THHHHHHHHHHHHSSCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHHCCCCc-CcCcHHHHHHHHHHcC-----ccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            34678999999999999 9999999999999999     889999999999999999999999999997664

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.29  E-value=3.5e-13  Score=113.21  Aligned_cols=120  Identities=13%  Similarity=0.165  Sum_probs=95.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-------
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-------  372 (445)
                      ...+++++|+.||.|++ |.|+.+||+.+|+.+|     ..++.++++.++..+|.|++|.|+|+||+..+..       
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   77 (143)
T 2obh_A            4 QKQEIREAFDLFDADGT-GTIDVKELKVAMRALG-----FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT   77 (143)
T ss_dssp             HHHHHHHHHHTTCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccH
Confidence            35678999999999999 9999999999999999     7799999999999999999999999999976532       


Q ss_pred             ----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                          ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dG~I~~  134 (143)
T 2obh_A           78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-----LQE--MIDEADRDGDGEVSE  134 (143)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCTTSSSSBCH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEeH
Confidence                23456668888888888887666666675544332     222  345678888998764

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.28  E-value=1.6e-12  Score=105.03  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             hhhccchHHHhccccccCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          297 LRRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       297 ~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +......+..+|+.||.| + |+|+.+||+.+|+.     +|     ...+++++++||+++|.|+||.|+|+||+.+|.
T Consensus        10 lE~~ie~l~~~F~~yd~d-d-G~Is~~EL~~~l~~~~~~~l~-----~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~   82 (121)
T 4drw_A           10 MEHAMETMMFTFHKFAGD-K-GYLTKEDLRVLMEKEFPGFLE-----NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA   82 (121)
T ss_dssp             HHHHHHHHHHTTGGGSCT-T-CSCCHHHHHHHTTTSCHHHHT-----TSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCC-C-CEEcHHHHHHHHHHHhhhhcc-----cCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            345567899999999988 8 99999999999986     67     778899999999999999999999999997664

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.28  E-value=2.4e-12  Score=102.81  Aligned_cols=69  Identities=17%  Similarity=0.200  Sum_probs=60.8

Q ss_pred             hhccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+++++|+.|| +|++ | +|+.+||+.+|+.     +|     ..++++++++||+++|.|+||.|+|+||+..|
T Consensus        18 ~~~~~~l~~aF~~fD~~dgd-GG~Is~~EL~~~l~~~l~~~lg-----~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m   91 (113)
T 2lnk_A           18 EKALDVMVSTFHKYSGKEGD-KFKLNKSELKELLTRELPSFLG-----KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL   91 (113)
T ss_dssp             HHHHHHHHHHHHHTTTTTSC-TTCBCHHHHHHHHHHHCGGGGT-----TCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcccCCC-CCEECHHHHHHHHHHHcchhcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            345678999999999 8999 7 9999999999986     66     66888999999999999999999999999766


Q ss_pred             hc
Q 013328          371 WK  372 (445)
Q Consensus       371 ~~  372 (445)
                      ..
T Consensus        92 ~~   93 (113)
T 2lnk_A           92 SC   93 (113)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.28  E-value=3.7e-12  Score=98.38  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=58.6

Q ss_pred             hhccchHHHhccccc-cCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.|| +||++|+|+.+||+.+|+. +|-. ...++++++++++++++|.|+||.|+|+||+..+.
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~-l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~   80 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSF-LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   80 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-C---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            456678999999998 6773389999999999986 6500 00346889999999999999999999999997664

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.27  E-value=8.4e-12  Score=89.86  Aligned_cols=63  Identities=21%  Similarity=0.371  Sum_probs=59.0

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++++|+.+|.|++ |.|+.+||+.++..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus         2 ~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~   64 (67)
T 1tiz_A            2 SAKRVFEKFDKNKD-GKLSLDEFREVALAFS-----PYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSS-SCEEHHHHHHHHHHTC-----TTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            57889999999999 9999999999999999     789999999999999999999999999996553

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.27  E-value=6.9e-12  Score=98.15  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=60.4

Q ss_pred             hhccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+++++|+.|| .|++ | +|+.+||+.+|+.     +|     ..+++++++.++..+|.|+||.|+|+||+..+
T Consensus         6 ~~~~~~l~~~F~~fDd~dg~-gG~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   79 (99)
T 2y5i_A            6 EGAMDALITVFHNYSGSEGD-KYKLSKGELKELLNAELTDFLM-----SQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV   79 (99)
T ss_dssp             HHHHHHHHHHHHHHHTSSSS-TTEECHHHHHHHHHHHSGGGGT-----TSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCC-cCcCCHHHHHHHHHHHhhhhcc-----ccccHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            345678999999997 8998 7 9999999999987     56     66899999999999999999999999999766


Q ss_pred             h
Q 013328          371 W  371 (445)
Q Consensus       371 ~  371 (445)
                      .
T Consensus        80 ~   80 (99)
T 2y5i_A           80 A   80 (99)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.27  E-value=1.2e-11  Score=95.91  Aligned_cols=68  Identities=31%  Similarity=0.510  Sum_probs=62.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......++++|+.||.|++ |+|+.+||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus        25 ~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           25 TDSEEEIREAFRVEDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             CSCHHHHHHHHHHHCTTCC-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCc-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3455789999999999999 9999999999999999     789999999999999999999999999997653

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.27  E-value=9.3e-12  Score=96.12  Aligned_cols=66  Identities=20%  Similarity=0.285  Sum_probs=59.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.|+||.|+|+||+..+..
T Consensus         6 ~~~~~~~~~F~~~D~d~d-G~I~~~el~~~l~~~g-------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   71 (92)
T 1fi6_A            6 EQRQYYVNQFKTIQPDLN-GFIPGSAAKEFFTKSK-------LPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHHHHHHTTTCCSTT-CEEEHHHHHHHHHHHS-------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            345678999999999999 9999999999999988       67899999999999999999999999976643

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.26  E-value=6.1e-12  Score=99.11  Aligned_cols=73  Identities=16%  Similarity=0.130  Sum_probs=59.6

Q ss_pred             hhccchHHHhccccc-cCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.|| .||++|+|+.+||+.+|+. +|-. ....++++++++||+++|.|+||.|+|+||+..|.
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~-l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~   83 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSW-LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   83 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-SCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchh-ccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            456678999999998 6774379999999999996 5500 00446899999999999999999999999997663

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.24  E-value=1.2e-11  Score=91.81  Aligned_cols=66  Identities=20%  Similarity=0.366  Sum_probs=60.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....++++|+.+|.|++ |.|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   70 (77)
T 2joj_A            5 QKQEIKEAFDLFDTNKT-GSIDYHELKVAMRALG-----FDVKKPEILELMNEYDREGNGYIGFDDFLDIMT   70 (77)
T ss_dssp             HHHHHHHHHHHHCCSSS-SEEEHHHHHHHHHHHT-----CCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            44678999999999999 9999999999999999     778999999999999999999999999996553

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.23  E-value=1.3e-11  Score=95.31  Aligned_cols=66  Identities=20%  Similarity=0.287  Sum_probs=59.4

Q ss_pred             hccchHHHhccccccCCCCC---cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGD---YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G---~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++++|+.|| +++ |   +|+.+||+.+|+.     +|     ..+++++++++++.+|.|+||.|+|+||+..+
T Consensus         6 ~~~~~l~~~F~~~D-~~d-G~~g~Is~~EL~~~l~~~~~~~lg-----~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~   78 (92)
T 3rm1_A            6 KAVVALIDVFHQYS-GRE-GDKHKLKKSELKELINNELSHFLE-----EIKEQEVVDKVMETLDSNGDGECDFQEFMAFV   78 (92)
T ss_dssp             HHHHHHHHHHHHHH-TSS-SSTTSBCHHHHHHHHHHHCTTTSC-----CCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-cCC-CCcCeECHHHHHHHHHHHhhhhcc-----CcccHHHHHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            45578999999999 766 6   9999999999999     88     77899999999999999999999999999766


Q ss_pred             h
Q 013328          371 W  371 (445)
Q Consensus       371 ~  371 (445)
                      .
T Consensus        79 ~   79 (92)
T 3rm1_A           79 A   79 (92)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.23  E-value=1.6e-11  Score=97.12  Aligned_cols=80  Identities=16%  Similarity=0.279  Sum_probs=68.6

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHH
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      ..+...+...+......++++|+.||.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||
T Consensus         9 ~~~~~~l~~~~~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~e~~~l~~~~d~~~~g~i~~~eF   82 (105)
T 1wlz_A            9 RDILARLHKAVTSHYHAITQEFENFDTMKT-NTISREEFRAICNRRV-----QILTDEQFDRLWNEMPVNAKGRLKYPDF   82 (105)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTSCBCTTSCBCHHHH
T ss_pred             HHHHHHHHHHHHchHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence            344444554455666789999999999999 9999999999999999     7899999999999999999999999999


Q ss_pred             HHHHhc
Q 013328          367 QQRIWK  372 (445)
Q Consensus       367 ~~~~~~  372 (445)
                      +..+..
T Consensus        83 ~~~~~~   88 (105)
T 1wlz_A           83 LSRFSS   88 (105)
T ss_dssp             HHHHC-
T ss_pred             HHHHhc
Confidence            976643

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.23  E-value=9e-12  Score=90.88  Aligned_cols=65  Identities=29%  Similarity=0.412  Sum_probs=60.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....++++|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~   68 (71)
T 2b1u_A            4 GLEDLQVAFRAFDQDGD-GHITVDELRRAMAGLG-----QPLPQEELDAMIREADVDQDGRVNYEEFARML   68 (71)
T ss_dssp             THHHHHHHHTTSCCSSS-SEEEHHHHHHHGGGTT-----CSSCHHHHHHHHHHCCSSSSSEEETTHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34678999999999999 9999999999999999     77999999999999999999999999999654

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.23  E-value=8.9e-12  Score=97.51  Aligned_cols=67  Identities=21%  Similarity=0.258  Sum_probs=61.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ......++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+..|..
T Consensus         7 ~~~~~~~~~~F~~~D~d~d-G~Is~~el~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A            7 SSGNPVYEKYYRQVEAGNT-GRVLALDAAAFLKKSG-------LPDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             TTTCTHHHHHHHHHCCTTS-SCCCSHHHHHHHHTSS-------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            3556789999999999999 9999999999999988       67999999999999999999999999977643

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.22  E-value=6.2e-12  Score=106.95  Aligned_cols=66  Identities=21%  Similarity=0.394  Sum_probs=60.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.|++.+|.| ||.|+|+||+++|..
T Consensus        83 ~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           83 PEDALRNAFSMFDEDGQ-GFIPEDYLKDLLENMG-----DNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             CHHHHHHHHHTTCSSCS-SCCCHHHHHHHHHSSS-----SCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             cHHHHHHHHhccccCCC-CeEeHHHHHHHHHHcC-----CcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            34679999999999999 9999999999999999     889999999999999988 999999999976643

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=99.22  E-value=7.9e-12  Score=97.08  Aligned_cols=67  Identities=10%  Similarity=0.126  Sum_probs=59.9

Q ss_pred             hccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+++++|+.|| +|++ | +|+.+||+.+|+.     +|     ..+++++++++++.+|.|+||.|+|+||+..+.
T Consensus         9 ~~~~~l~~~F~~fD~~dg~-gg~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   82 (95)
T 2wcb_A            9 EHLEGIVNIFHQYSVRKGH-FDTLSKGELKQLLTKELANTIK-----NIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA   82 (95)
T ss_dssp             HHHHHHHHHHHHHHTSSSS-TTEEEHHHHHHHHHHHTHHHHH-----HCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCC-CCccCHHHHHHHHHHHhhhhcc-----ccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            44568999999999 8999 7 9999999999987     66     668899999999999999999999999997664

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.22  E-value=1e-11  Score=96.51  Aligned_cols=68  Identities=21%  Similarity=0.279  Sum_probs=54.8

Q ss_pred             hccchHHHhccccc-cCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+++++|+.|| .|+++|+|+.+||+.+|+.     +|     ..+++++++.+++.+|.|+||.|+|+||+..+.
T Consensus         6 ~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~   79 (95)
T 1j55_A            6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ-----SGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (95)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-----------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcc-----cccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            45678999999999 7883289999999999987     45     567888999999999999999999999997664

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.22  E-value=9.4e-12  Score=96.69  Aligned_cols=66  Identities=14%  Similarity=0.193  Sum_probs=59.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.|+||.|+|+||+..|..
T Consensus         7 ~~~~~~~~~F~~~D~d~d-G~I~~~el~~~l~~~g-------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A            7 AEKAKYDEIFLKTDKDMD-GFVSGLEVREIFLKTG-------LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHTTT-------CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            345678999999999999 9999999999999988       67999999999999999999999999976643

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.21  E-value=3e-11  Score=92.72  Aligned_cols=69  Identities=22%  Similarity=0.345  Sum_probs=62.9

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ......+..+|+.||.|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus        16 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4456778999999999999 9999999999999999     7899999999999999999999999999976543

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.21  E-value=1.1e-12  Score=110.81  Aligned_cols=122  Identities=14%  Similarity=0.138  Sum_probs=99.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      .++..+++++|+.+|+|++ |.|+.+||+.+|+.+|     ..++++++..++..+|.+++|.|+|.||+..+...    
T Consensus         6 ~eqi~el~~~F~~~D~d~~-G~I~~~El~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   79 (148)
T 2lmt_A            6 EEQIAEFKDAFVQFDKEGT-GKIATRELGTLMRTLG-----QNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRET   79 (148)
T ss_dssp             SHHHHHHHHHHHHHHCSSC-CEEEGGGHHHHHHHHT-----CCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHcCCCC-CeECHHHHHHHHHhcC-----CCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhccc
Confidence            4556789999999999999 9999999999999999     88999999999999999999999999999766331    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             ..|...|.+.+|.++..|.......+|..++...     +..  ....+|.+.+|.++.
T Consensus        80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e-----~~~--l~~~~D~d~dG~I~~  138 (148)
T 2lmt_A           80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEE-----IDE--MIREADFDGDGMINY  138 (148)
T ss_dssp             TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCCSCCSSEEH
T ss_pred             CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHH-----HHH--HHHHhCCCCCCeEeH
Confidence                   2345668888899988887777777776555433     232  445788899998863

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.19  E-value=3e-11  Score=94.53  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=57.9

Q ss_pred             hhccchHHHhccccccCC---CCCcccHHHHHHHHHHhccCCCC--CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADN---DGDYITYSGFCEALEQLNLTGHK--HGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~---~~G~i~~~el~~~l~~~g~~~~~--~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.||.++   + |+|+.+||+.+|+.++  ++.  ...+++++++||+++|.|+||.|+|+||+..|.
T Consensus         7 e~~i~~l~~~F~~fD~~~g~~~-G~Is~~EL~~~l~~~~--~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~   82 (100)
T 3nxa_A            7 EKAVIVLVENFYKYVSKYSLVK-NKISKSSFREMLQKEL--NHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIG   82 (100)
T ss_dssp             HHHHHHHHHHHHHTSCTTCSCT-TCBCHHHHHHHHHHHS--TTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCC-CeEcHHHHHHHHHHHc--cccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            455678999999999963   7 9999999999999854  110  122368899999999999999999999997664

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.19  E-value=4.8e-11  Score=100.01  Aligned_cols=65  Identities=26%  Similarity=0.433  Sum_probs=60.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....+.++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+
T Consensus        77 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           77 TKEEILKAFKLFDDDET-GKISFKNLKRVAKELG-----ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            34678999999999999 9999999999999999     78999999999999999999999999999654

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.19  E-value=3.7e-12  Score=107.46  Aligned_cols=121  Identities=17%  Similarity=0.233  Sum_probs=95.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....++++|..+|.|++ |.|+.+||+.+|+.+|     ..++..+++.++..+|.|++|.|+|+||+..+..      
T Consensus         7 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   80 (148)
T 1exr_A            7 EQIAEFKEAFALFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD   80 (148)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCC
Confidence            345678999999999999 9999999999999999     7799999999999999999999999999976532      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                           ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        81 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~d~dg~i~~  138 (148)
T 1exr_A           81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDE--MIREADIDGDGHINY  138 (148)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCSSSSSSBCH
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEeH
Confidence                 12456678888888888887666666665444332     222  334678888898763

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.18  E-value=3.7e-11  Score=92.52  Aligned_cols=67  Identities=31%  Similarity=0.544  Sum_probs=61.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+.++|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus         7 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~   73 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQN-GYISASELRHVMINLG-----EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT   73 (92)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            34678999999999999 9999999999999999     7899999999999999999999999999976654

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.18  E-value=1.6e-11  Score=106.94  Aligned_cols=66  Identities=21%  Similarity=0.400  Sum_probs=60.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+.++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.|++.+| |+||.|+|+||+++|..
T Consensus        82 ~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           82 SEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHHHCSSCS-SSBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----cccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            34678999999999999 9999999999999999     8899999999999999 99999999999976643

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.18  E-value=3.6e-11  Score=95.09  Aligned_cols=65  Identities=18%  Similarity=0.300  Sum_probs=59.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+++++|+.||+ ++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+..|..
T Consensus        12 ~e~~~~~~~F~~~D~-~d-G~Is~~el~~~l~~~g-------l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A           12 EDKAKYDAIFDSLSP-VN-GFLSGDKVKPVLLNSK-------LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             HHHHHHHHHHTTSCC-SS-SCCBHHHHHHHHHTTT-------CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CC-CeEcHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            445678999999999 99 9999999999999988       77999999999999999999999999977644

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.18  E-value=1.6e-11  Score=97.07  Aligned_cols=70  Identities=17%  Similarity=0.223  Sum_probs=58.1

Q ss_pred             hhccchHHHhccccc-cCCCCCcccHHHHHHHHHH-hccCCCCCCCC-HHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGLA-DEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+++++|+.|| .|+++|+|+.+||+.+|+. +|     ...+ +++++++|+.+|.|+||.|+|+||+..+..
T Consensus        18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg-----~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~   90 (106)
T 2h2k_A           18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLP-----HLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   90 (106)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCT-----TTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcC-----cCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            345578999999999 7985379999999999986 66     3333 468999999999999999999999976643

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.16  E-value=9.7e-12  Score=89.31  Aligned_cols=61  Identities=18%  Similarity=0.280  Sum_probs=56.5

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ++++|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus         2 l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~   62 (66)
T 3li6_A            2 AEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY   62 (66)
T ss_dssp             CCHHHHHHCTTCS-SSCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCCC-CcccHHHHHHHHHHcc-----CCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            4578999999999 9999999999999998     66888999999999999999999999999655

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.16  E-value=9.8e-12  Score=99.19  Aligned_cols=66  Identities=20%  Similarity=0.240  Sum_probs=59.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+..|..
T Consensus        19 ~~~~~~~~~F~~~D~d~d-G~Is~~el~~~l~~~g-------l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~   84 (110)
T 1iq3_A           19 EQREYYVNQFRSLQPDPS-SFISGSVAKNFFTKSK-------LSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSS-SEEEHHHHHHHCCSSS-------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            445678999999999999 9999999999998877       56778999999999999999999999976644

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.15  E-value=6.5e-12  Score=104.88  Aligned_cols=119  Identities=13%  Similarity=0.192  Sum_probs=93.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-------
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-------  372 (445)
                      ....++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..       
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   77 (142)
T 2bl0_C            4 QVSEFKEAFELFDSERT-GFITKEGLQTVLKQFG-----VRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTS   77 (142)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCCh
Confidence            45678999999999999 9999999999999999     7899999999999999999999999999976643       


Q ss_pred             ----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                          ...+...|.+..|.+...|.......+|..++...     +..  ....+| +.+|.|+.
T Consensus        78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d-~~dg~i~~  133 (142)
T 2bl0_C           78 EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHE-----FAE--FLGITE-TEKGQIRY  133 (142)
T ss_dssp             HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHHC-CSSSEECS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhC-CCCCcEeH
Confidence                12345667788888888877666666665443322     222  334567 78888763

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=99.15  E-value=6.6e-11  Score=97.70  Aligned_cols=64  Identities=22%  Similarity=0.275  Sum_probs=58.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++++|+.|| |++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+.+|..
T Consensus        49 e~~~l~~~F~~fD-d~d-G~Is~~El~~~l~~~g-------l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l  112 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVN-GKITGANAKKEMVKSK-------LPNTVLGKIWKLADVDKDGLLDDEEFALANHL  112 (139)
T ss_dssp             THHHHHHHHHHSC-CSS-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCC-CeECHHHHHHHHHHhC-------cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3567899999999 999 9999999999999988       78999999999999999999999999977644

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.15  E-value=5.1e-12  Score=106.34  Aligned_cols=119  Identities=8%  Similarity=0.076  Sum_probs=90.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh-cCCCCceeeHHHHHHHHhcc------
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA-DIDGNGVVDYKEFQQRIWKT------  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~-d~~~~g~i~~~eF~~~~~~~------  373 (445)
                      ...++++|..+|.|++ |.|+.+||+.+|+.+|     ..++.++++.++..+ |.|++|.|+|+||+..+...      
T Consensus         3 ~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~   76 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQ-GAIAKDSLGDYLRAIG-----YNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDA   76 (148)
T ss_dssp             CCCCTTCHHHHCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHG
T ss_pred             HHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccc
Confidence            4567889999999999 9999999999999999     779999999999999 99999999999999766432      


Q ss_pred             ----------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                                ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        77 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~d~dg~i~~  138 (148)
T 1m45_A           77 TTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE-----VDE--LLKGVEVDSNGEIDY  138 (148)
T ss_dssp             GGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH-----HHH--HHTTCCCCTTSEEEH
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCeEeH
Confidence                      1235567777788887776666666665443322     222  445788899998764

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.14  E-value=1.3e-11  Score=108.79  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=92.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      .....++++|..+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+...     
T Consensus         7 ~~~~~l~~~F~~~D~d~d-G~I~~~E~~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~   80 (188)
T 1s6i_A            7 EEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (188)
T ss_dssp             TTTCSHHHHHHTTSSSSS-SCEEHHHHHHHHTTTT-----CCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence            456789999999999999 9999999999999999     77999999999999999999999999999766321     


Q ss_pred             -----CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          374 -----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       374 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                           ..+...|.+.+|.+...|.......+|+       .+.++..  ....+|.+.+|.|+..
T Consensus        81 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-------~~~~~~~--~~~~~D~d~dG~Is~~  136 (188)
T 1s6i_A           81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-------DDIHIDD--MIKEIDQDNDGQIDYG  136 (188)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-------CTTHHHH--HHHHHCSSSSSEEETT
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-------CHHHHHH--HHHHHCCCCCCcEeHH
Confidence                 1234556777777777776555555552       1223333  4456788888887654

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=99.14  E-value=2.1e-11  Score=94.15  Aligned_cols=68  Identities=16%  Similarity=0.239  Sum_probs=58.5

Q ss_pred             hccchHHHhccccc-cCCCCC-cccHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~~g-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.|| +|++ | +|+.+||+.+|+..+ +.   . +++++++.+++.+|.|+||.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~~d~d-G~~I~~~El~~~l~~~~~~~---~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~   77 (92)
T 2kax_A            7 KALTTMVTTFHKYSGREGS-KLTLSRKELKELIKKELCLG---E-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLT   77 (92)
T ss_dssp             HHHHHHHHHHHHHHTTSSC-SSEEEHHHHHHHHHHHSCCT---T-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCC-CCeeCHHHHHHHHHHHcCCC---C-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            44577999999999 9999 9 999999999999732 10   3 7788899999999999999999999997663

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.14  E-value=1.3e-11  Score=105.15  Aligned_cols=121  Identities=16%  Similarity=0.241  Sum_probs=97.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....+.++|+.+|.|++ |.|+.+||..+|..+|     ..++.++++.++..+|.+++|.|+|+||+..+..      
T Consensus        20 ~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   93 (161)
T 3fwb_A           20 EQKQEIYEAFSLFDMNND-GFLDYHELKVAMKALG-----FELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD   93 (161)
T ss_dssp             HHHHHHHHHHHHHCTTSS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence            455678999999999999 9999999999999999     7899999999999999999999999999976643      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                           ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~-----~~~--~~~~~d~~~~g~i~~  151 (161)
T 3fwb_A           94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEE-----LRA--MIEEFDLDGDGEINE  151 (161)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-----HHH--HHHTTCSSSSSSEEH
T ss_pred             cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcCcH
Confidence                 22346678888888888887777777776544332     222  345788888998863

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.14  E-value=8.1e-11  Score=94.13  Aligned_cols=65  Identities=18%  Similarity=0.241  Sum_probs=58.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||+|++ |+|+.+||+.+|+  +     ..++.+++++++..+|.|+||.|+|+||+..+.
T Consensus        11 ~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~--~-----~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~   75 (111)
T 2kgr_A           11 SSRLKYRQLFNSHDKTMS-GHLTGPQARTILM--Q-----SSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH   75 (111)
T ss_dssp             HHHHHHHHHHHTTSCSSC-CEEEHHHHHHHHH--T-----TCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHH--h-----CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            345678999999999999 9999999999998  4     458899999999999999999999999997664

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.14  E-value=6.3e-11  Score=91.18  Aligned_cols=65  Identities=15%  Similarity=0.302  Sum_probs=59.6

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++.+|+.+|.|++ |+|+.+||+.+|+.+|       ++.++++.++..+|.|+||.|+|+||+..+
T Consensus        23 ~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~   87 (91)
T 2pmy_A           23 GEELARLRSVFAACDANRS-GRLEREEFRALCTELR-------VRPADAEAVFQRLDADRDGAITFQEFARGF   87 (91)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEECHHHHTHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHcC-------cCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            3556779999999999999 9999999999999988       678999999999999999999999999655

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.14  E-value=2.5e-11  Score=104.16  Aligned_cols=132  Identities=17%  Similarity=0.223  Sum_probs=96.7

Q ss_pred             hHHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          286 SEAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       286 ~~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ....+..+...+ ......+.++|+.+|.|++ |.|+.+||+.+|..+|     ..++++++..++..+|.|++|.|+|+
T Consensus        10 ~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~   83 (166)
T 2aao_A           10 KKMALRVIAESLSEEEIAGLKEMFNMIDADKS-GQITFEELKAGLKRVG-----ANLKESEILDLMQAADVDNSGTIDYK   83 (166)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCC-SSBCHHHHHHHGGGGT-----CCCCHHHHHHHHHHHCTTCCSSBCHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcHH
Confidence            344455555444 5566789999999999999 9999999999999999     77899999999999999999999999


Q ss_pred             HHHHHHhc----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          365 EFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       365 eF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      ||+..+..          ...+...|.+..|.+...|........|+.       +.++..  ....+|.+.+|.|+.
T Consensus        84 ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-------~~~~~~--~~~~~d~~~dg~i~~  152 (166)
T 2aao_A           84 EFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVE-------DVRIEE--LMRDVDQDNDGRIDY  152 (166)
T ss_dssp             HHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------------CC--HHHHHCTTCSSSBCH
T ss_pred             HHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC-------HHHHHH--HHHHhCCCCCCcEeH
Confidence            99976632          223455677788888887766555555532       222222  345678888998764

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.13  E-value=5.5e-11  Score=90.32  Aligned_cols=66  Identities=11%  Similarity=0.044  Sum_probs=60.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH---HHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||.|++ |+|+.+||+.+|+.+|     ..++.++   ++.++..+|.|++|.|+| ||+..+.
T Consensus        11 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~   79 (86)
T 1j7q_A           11 EEKDECMKIFDIFDRNAE-NIAPVSDTMDMLTKLG-----QTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCS   79 (86)
T ss_dssp             THHHHHHHHHHHHSTTTT-SCBCHHHHHHHHHHTS-----CCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHH
Confidence            445678999999999999 9999999999999999     7899999   999999999999999999 9997654

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.13  E-value=1.1e-11  Score=106.77  Aligned_cols=121  Identities=17%  Similarity=0.188  Sum_probs=97.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....+.++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..      
T Consensus        25 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   98 (169)
T 3qrx_A           25 EQKQEIREAFDLFDTDGS-GTIDAKELKVAMRALG-----FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERD   98 (169)
T ss_dssp             HHHHHHHHHHHHHCTTCC-SEECHHHHHHHHHHTS-----CCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccC
Confidence            445778999999999999 9999999999999999     7799999999999999999999999999976632      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                           ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        99 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~D~~~dg~i~~  156 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE-----LQE--MIAEADRNDDNEIDE  156 (169)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCCSSSSCBCH
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCCEeH
Confidence                 22456678888888888887766666775444332     222  445678888998864

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.13  E-value=9.2e-12  Score=110.01  Aligned_cols=135  Identities=16%  Similarity=0.124  Sum_probs=96.2

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHH
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE  365 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e  365 (445)
                      ...+..+...+ ......++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++ ++++.++..+|.|++|.|+|+|
T Consensus        36 ~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~g-----~~~~-~~~~~l~~~~D~d~~g~i~~~E  108 (191)
T 3k21_A           36 KLAMTIIAQQSNDYDVEKLKSTFLVLDEDGK-GYITKEQLKKGLEKDG-----LKLP-YNFDLLLDQIDSDGSGKIDYTE  108 (191)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCC-TTHHHHHHHHCTTCSSSEEHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHcC-----CCcH-HHHHHHHHHhCCCCCCeEeHHH
Confidence            33444444444 4567889999999999999 9999999999999999     6677 8899999999999999999999


Q ss_pred             HHHHHhcc---------CccccccccCCcccccccccccccc--cCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          366 FQQRIWKT---------TWSDQRNDLNDEDEDGFVKSSLEQT--IGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       366 F~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      |+..+...         ..+...|.+.+|.+...|.......  .|..++...  ..++..  ....+|.+.+|.|+.
T Consensus       109 F~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~--~~~~~~--~~~~~D~d~dG~Is~  182 (191)
T 3k21_A          109 FIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRD--VNRVKR--MIRDVDKNNDGKIDF  182 (191)
T ss_dssp             HHHHHSCGGGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHH--HHHHHH--HHHHHCSSSSSSBCH
T ss_pred             HHHHHHhhhhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhH--HHHHHH--HHHHhcCCCCCeECH
Confidence            99766332         2345667778888887776554443  222222210  001222  335678889998863

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=99.13  E-value=1.1e-10  Score=92.66  Aligned_cols=67  Identities=13%  Similarity=0.132  Sum_probs=61.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++.+|+.||.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        29 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~   95 (107)
T 2d58_A           29 SKLEGFKEKYMEFDLNGN-GDIDIMSLKRMLEKLG-----VPKTHLELKKLIGEVSSGSGETFSYPDFLRMML   95 (107)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SCEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            445678999999999999 9999999999999999     789999999999999999999999999996553

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.12  E-value=1.6e-10  Score=97.25  Aligned_cols=67  Identities=25%  Similarity=0.491  Sum_probs=61.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..|.
T Consensus        80 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A           80 DSEEELIEAFKVFDRDGN-GLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            344678899999999999 9999999999999999     789999999999999999999999999997764

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.12  E-value=6.4e-11  Score=98.37  Aligned_cols=67  Identities=19%  Similarity=0.326  Sum_probs=61.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     . .+++++++.+++.+|.|+||.|+|+||+..+..
T Consensus        38 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~  105 (135)
T 3h4s_E           38 FVSELCKGFSLLADPER-HLITAESLRRNSGILG-----IEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVR  105 (135)
T ss_dssp             HHHHHHHHHHHHSBTTT-TBBCHHHHHHHGGGGT-----CCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            34678999999999999 9999999999999998     5 789999999999999999999999999976643

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.12  E-value=2.5e-11  Score=105.79  Aligned_cols=121  Identities=18%  Similarity=0.254  Sum_probs=96.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      .++..+++++|..||+|++ |+|+.+||+.+|+.+|     ..+++.++..++..+|.|++|.|+|+||+..+...    
T Consensus         7 ~eqi~elk~~F~~~D~d~d-G~I~~~El~~~l~~lg-----~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~   80 (176)
T 2lhi_A            7 EEQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN   80 (176)
T ss_dssp             TTGGGHHHHHHHTTCSSCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHcC-----CChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence            4567889999999999999 9999999999999999     88999999999999999999999999999666331    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             ..+...|.+.+|.++..|.......+|..++...+     ..  ....+| +.||+++-
T Consensus        81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei-----~~--l~~~~d-d~dG~I~~  138 (176)
T 2lhi_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV-----DD--MLREVS-DGSGEINI  138 (176)
T ss_dssp             HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHH-----HH--HHHHHH-TTSSCBCT
T ss_pred             CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHH-----HH--HHHhhc-CCCCeEeH
Confidence                   23456688889999988877777777766554432     21  223445 67888764

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.11  E-value=9.6e-11  Score=93.24  Aligned_cols=68  Identities=24%  Similarity=0.382  Sum_probs=62.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......++.+|+.||+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||++.+.
T Consensus        37 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 5pal_A           37 GKTDAQVKEVFEILDKDQS-GFIEEEELKGVLKGFSAHG-----RDLNDTETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             TCCHHHHHHHHHHHCTTCS-SEECHHHHHTHHHHHCTTC-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3455789999999999999 999999999999998   7     789999999999999999999999999997653

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.11  E-value=2.7e-11  Score=92.24  Aligned_cols=66  Identities=30%  Similarity=0.475  Sum_probs=60.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++++|+.+|.|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus        20 ~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           20 EEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSTTTTTTHHHHHCTTCS-SCEEHHHHHHHHHTTT-----SSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345678899999999999 9999999999999999     77999999999999999999999999998543

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.11  E-value=5.8e-12  Score=111.93  Aligned_cols=133  Identities=8%  Similarity=0.062  Sum_probs=89.4

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHH
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE  365 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e  365 (445)
                      ...+..+...+ ......+.++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+|
T Consensus        41 ~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~~g~I~~~E  114 (197)
T 3pm8_A           41 KIALTIIAKHLCDVEINNLRNIFIALDVDNS-GTLSSQEILDGLKKIG-----YQKIPPDIHQVLRDIDSNASGQIHYTD  114 (197)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHC---------CHHHHHHHHC-------CEEHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcHHH
Confidence            44555555545 5667889999999999999 9999999999999999     778899999999999999999999999


Q ss_pred             HHHHHhc----------cCccccccccCCccccccccccccccc--CeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          366 FQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTI--GFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       366 F~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      |+..+..          ...+...|.+.+|.+...|........  |..++..     ++..  ....+|.+.+|.|+.
T Consensus       115 F~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~-----~~~~--l~~~~D~d~dG~Is~  186 (197)
T 3pm8_A          115 FLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDK-----AIDS--LLQEVDLNGDGEIDF  186 (197)
T ss_dssp             HHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHH-----HHHH--HHHHHCTTCSSSEEH
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHH-----HHHH--HHHHHcCCCCCcCcH
Confidence            9965532          234566678888888888766555554  3333322     2222  345678889998863

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.11  E-value=3.5e-11  Score=102.63  Aligned_cols=122  Identities=17%  Similarity=0.196  Sum_probs=94.1

Q ss_pred             hhccchHHHhccccccCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc---
Q 013328          298 RRASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT---  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~---  373 (445)
                      ......++++|+.+|.|+ + |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+...   
T Consensus        14 ~~~~~~l~~~F~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~   87 (161)
T 1dtl_A           14 EEQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   87 (161)
T ss_dssp             HHHHHHHHHHHHHHTTTCGG-GSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence            345567899999999999 9 9999999999999999     77999999999999999999999999999766332   


Q ss_pred             -----------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                                 ..+...|.+.+|.++..|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dg~i~~  150 (161)
T 1dtl_A           88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD-----IEE--LMKDGDKNNDGRIDY  150 (161)
T ss_dssp             ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHH-----HHH--HHHHHCTTSSSEEEH
T ss_pred             cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEeH
Confidence                       1345667788888888887766666664433322     222  334678888998763

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.11  E-value=1.4e-10  Score=86.22  Aligned_cols=64  Identities=23%  Similarity=0.401  Sum_probs=58.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..++.+|+.+|.|++ |+|+.+||+.+|+.+| .     +++++++.++..+|.|++|.|+|+||+..+..
T Consensus         3 ~~l~~~F~~~D~~~~-G~i~~~el~~~l~~~g-~-----~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   66 (78)
T 1k9u_A            3 DDMERIFKRFDTNGD-GKISLSELTDALRTLG-S-----TSADEVQRMMAEIDTDGDGFIDFNEFISFCNA   66 (78)
T ss_dssp             CHHHHHHHHHCTTCS-SEECHHHHHHHHHHHH-T-----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-C-----CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            568899999999999 9999999999999987 3     78899999999999999999999999976643

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.11  E-value=1.2e-10  Score=88.45  Aligned_cols=68  Identities=21%  Similarity=0.402  Sum_probs=60.7

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ......++.+|+.+|.|++ |+|+.+||+.+|..+| .     +++++++.++..+|.|++|.|+|+||+..+..
T Consensus         7 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-~-----~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   74 (86)
T 2opo_A            7 PQDIADRERIFKRFDTNGD-GKISSSELGDALKTLG-S-----VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   74 (86)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHTTT-T-----CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHcC-C-----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3446779999999999999 9999999999999876 3     78999999999999999999999999976643

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=99.10  E-value=8.5e-11  Score=90.67  Aligned_cols=67  Identities=19%  Similarity=0.287  Sum_probs=61.2

Q ss_pred             hccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.|| .|++ | .|+.+||+.+|..     +|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus         6 ~~~~~l~~~F~~~D~~d~~-G~~I~~~el~~~l~~~~~~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~   79 (93)
T 1k2h_A            6 TAMETLINVFHAHSGKEGD-KYKLSKKELKDLLQTELSSFLD-----VQKDADAVDKIMKELDENGDGEVDFQEFVVLVA   79 (93)
T ss_dssp             HHHHHHHHHHHHHHTTSSC-CSSCCHHHHHHHHHHHTHHHHH-----CCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCC-cCccCHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            45567899999999 7999 9 9999999999998     88     779999999999999999999999999997653

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.10  E-value=1.2e-10  Score=93.40  Aligned_cols=67  Identities=13%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             hccchHHHhcccccc-CCCCC-cccHHHHHHHHH-HhccCCCCCC-----CCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKA-DNDGD-YITYSGFCEALE-QLNLTGHKHG-----LADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~-~~~~G-~i~~~el~~~l~-~~g~~~~~~~-----~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++++|+.||. |++ | +|+.+||+.+|+ .+|     ..     +++++++.+|..+|.|+||.|+|+||+..+
T Consensus         9 ~~~~~l~~~F~~fD~~dgd-G~~Is~~El~~~l~~~lg-----~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   82 (113)
T 1xk4_C            9 RNIETIINTFHQYSVKLGH-PDTLNQGEFKELVRKDLQ-----NFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   82 (113)
T ss_dssp             HHHHHHHHHHHHHHTTSSS-TTSBCHHHHHHHHHHHTT-----TTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCC-CCEECHHHHHHHHHHHhh-----hhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            345678999999995 999 9 999999999999 777     32     578999999999999999999999999766


Q ss_pred             h
Q 013328          371 W  371 (445)
Q Consensus       371 ~  371 (445)
                      .
T Consensus        83 ~   83 (113)
T 1xk4_C           83 A   83 (113)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.09  E-value=9.6e-11  Score=93.23  Aligned_cols=67  Identities=24%  Similarity=0.387  Sum_probs=61.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++.+|+.||.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|+||.|+|+||++.+
T Consensus        38 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~  107 (109)
T 3fs7_A           38 SKTPDQIKKVFGILDQDKS-GFIEEEELQLFLKNFSSSA-----RVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV  107 (109)
T ss_dssp             TCCHHHHHHHHHHHSTTCS-SSBCHHHHHTTGGGTCTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHCCCCC-CeEeHHHHHHHHHHHhccc-----ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3455789999999999999 999999999999998   7     77999999999999999999999999999654

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.09  E-value=2.4e-10  Score=90.80  Aligned_cols=68  Identities=24%  Similarity=0.408  Sum_probs=61.8

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......++.+|+.+|.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus        37 ~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 1rwy_A           37 KKSADDVKKVFHILDKDKS-GFIEEDELGSILKGFSSDA-----RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             GSCHHHHHHHHHHHSTTCS-SEECHHHHHTHHHHHCTTC-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHHhccC-----CCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            3455788999999999999 999999999999999   6     679999999999999999999999999997553

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.09  E-value=1.6e-10  Score=92.00  Aligned_cols=66  Identities=23%  Similarity=0.375  Sum_probs=61.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++.+|+.||.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        39 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  107 (109)
T 1bu3_A           39 KSADDIKKAFFVIDQDKS-GFIEEDELKLFLQVFSAGA-----RALTDAETKAFLKAGDSDGDGAIGVDEWAALV  107 (109)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SSEEHHHHHTHHHHHSTTC-----CCCCHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             hhHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHcccC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            455789999999999999 999999999999999   7     77999999999999999999999999999654

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.09  E-value=1.6e-10  Score=111.58  Aligned_cols=79  Identities=28%  Similarity=0.464  Sum_probs=65.7

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      +.|+..+...+  ......++++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.||+.+|.|+||.|+|+
T Consensus       358 eEFl~lms~~lk~~d~eeeLreAFk~fDkDgd-G~IS~eELr~vL~~lG-----e~LSdeEIdeLfke~D~DgDGkIsye  431 (440)
T 3u0k_A          358 PEFLIMMARKMKDTDSEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYE  431 (440)
T ss_dssp             HHHHHHHHTC------CHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHHHHHHhcCCChHHHHHHHHHHHCCCCc-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            34444444333  2345689999999999999 9999999999999999     88999999999999999999999999


Q ss_pred             HHHHHHh
Q 013328          365 EFQQRIW  371 (445)
Q Consensus       365 eF~~~~~  371 (445)
                      ||++.|.
T Consensus       432 EFvkmMt  438 (440)
T 3u0k_A          432 EFVQMMT  438 (440)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9997664

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.08  E-value=2e-11  Score=106.26  Aligned_cols=123  Identities=15%  Similarity=0.228  Sum_probs=95.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ......++++|..+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..     
T Consensus         7 ~~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~   80 (179)
T 2f2o_A            7 EEQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT   80 (179)
T ss_dssp             CSHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCc
Confidence            3455778999999999999 9999999999999999     7799999999999999999999999999966532     


Q ss_pred             ------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                            ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+..
T Consensus        81 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~-----~~~--~~~~~D~~~dg~i~~~  140 (179)
T 2f2o_A           81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVNYE  140 (179)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHH-----HHH--HHHHHCTTCSSSEEHH
T ss_pred             ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHcCCCCCCcCcHH
Confidence                  23456678888888888887666666665443322     222  3346788889988753

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=99.08  E-value=2.8e-11  Score=94.86  Aligned_cols=67  Identities=18%  Similarity=0.272  Sum_probs=58.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH-----hccCCCCC--CCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKH--GLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~--~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+++++|+.||.+ + |+|+.+||+.+|+.     +|     .  .+++++++.+|+++|.|+||.|+|+||+..|
T Consensus         6 ~~~~~~l~~~F~~fD~~-~-g~Is~~El~~~l~~~~~~~lg-----~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~   78 (100)
T 1psr_A            6 ERSIIGMIDMFHKYTRR-D-DKIDKPSLLTMMKENFPNFLS-----ACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL   78 (100)
T ss_dssp             HHHHHHHHHHHHHTCCT-T-SCBCHHHHHHHHHHHCHHHHH-----HHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-C-CeECHHHHHHHHHHHhHhhhc-----cccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34567899999999976 8 99999999999987     55     4  4677889999999999999999999999766


Q ss_pred             h
Q 013328          371 W  371 (445)
Q Consensus       371 ~  371 (445)
                      .
T Consensus        79 ~   79 (100)
T 1psr_A           79 G   79 (100)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.08  E-value=1.7e-10  Score=91.60  Aligned_cols=67  Identities=25%  Similarity=0.412  Sum_probs=61.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++.+|+.||.|++ |+|+.+||+.+|..+   |     ..+++++++.++..+|.|++|.|+|+||++.+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (108)
T 2pvb_A           37 SKSLDDVKKAFYVIDQDKS-GFIEEDELKLFLQNFSPSA-----RALTDAETKAFLADGDKDGDGMIGVDEFAAMI  106 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHHhccC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            3455789999999999999 999999999999998   6     77999999999999999999999999999654

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=99.08  E-value=6.6e-11  Score=92.00  Aligned_cols=67  Identities=18%  Similarity=0.189  Sum_probs=58.4

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.||. ++ |+|+.+||+.+|+.     +|     ..+++++++.+++.+|.|+||.|+|+||+..+.
T Consensus         5 ~~~~~~l~~~F~~fD~-~d-g~Is~~El~~~l~~~~~~~lg-----~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~   76 (96)
T 1a4p_A            5 EHAMETMMFTFHKFAG-DK-GYLTKEDLRVLMEKEFPGFLE-----NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA   76 (96)
T ss_dssp             HHHHHHHHHHHHHHHG-GG-CSBCHHHHHHHHHHHCHHHHH-----HSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC-CC-CeECHHHHHHHHHHHcccccc-----cccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3456789999999994 67 89999999999986     56     567889999999999999999999999997664

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.08  E-value=2.2e-11  Score=102.07  Aligned_cols=121  Identities=19%  Similarity=0.253  Sum_probs=95.0

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ......+.++|+.+|.|++ |.|+.+||+.+|..+|     ..++.+++..++..+|.+++|.|+|+||+..+..     
T Consensus         7 ~~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~   80 (147)
T 4ds7_A            7 EEQIAEFKEAFALFDKDNS-GSISASELATVMRSLG-----LSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN   80 (147)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence            3456788999999999999 9999999999999999     7799999999999999999999999999976632     


Q ss_pred             ------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                            ...+...|.+..|.+...|.......+|..++...     +..  ....+| +.+|.|+.
T Consensus        81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-----~~~--~~~~~d-~~dg~i~~  138 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE-----VDE--MLREVS-DGSGEINI  138 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHS-SSCSSEEH
T ss_pred             CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhc-CCCCcCcH
Confidence                  22346667888888888887766667775544333     222  334567 78888763

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.07  E-value=1.7e-11  Score=109.61  Aligned_cols=121  Identities=10%  Similarity=0.094  Sum_probs=93.0

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC--CCCHHHHHHHH-------HHhcCCCCceeeHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH--GLADEETKDLW-------VQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~~~~~-------~~~d~~~~g~i~~~eF~~  368 (445)
                      ......+.++|..+|.|++ |.|+.+||+.+|..+|     .  .+++++++.++       ..+|.|++|.|+|+||+.
T Consensus        32 ~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~-----~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~  105 (208)
T 2hpk_A           32 PKMLSRLYKRFDTFDLDSD-GKMEMDEVLYWPDRMR-----QLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVE  105 (208)
T ss_dssp             ----CHHHHHHHHHCTTCS-SEECHHHHTHHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHH-----hhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            3456789999999999999 9999999999999998     5  78999999999       999999999999999997


Q ss_pred             HHh---------c------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCC
Q 013328          369 RIW---------K------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDH  427 (445)
Q Consensus       369 ~~~---------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (445)
                      .+.         .            ...+...|.+.+|.++..|.......+|  +     .+.++..  ....+|.+.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~-----~~~~~~~--~~~~~D~d~d  176 (208)
T 2hpk_A          106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--V-----PQEAAYT--FFEKADTDKS  176 (208)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--S-----CTTHHHH--HHHHHCTTCC
T ss_pred             HHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--c-----CHHHHHH--HHHHhCCCCC
Confidence            654         1            1134556778888888888766666666  2     2333333  4456788999


Q ss_pred             cceeEE
Q 013328          428 ARLTVV  433 (445)
Q Consensus       428 ~~~~~~  433 (445)
                      |.|+..
T Consensus       177 G~I~~~  182 (208)
T 2hpk_A          177 GKLERT  182 (208)
T ss_dssp             SSBCHH
T ss_pred             CcCcHH
Confidence            998753

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=99.07  E-value=6.8e-11  Score=90.53  Aligned_cols=67  Identities=16%  Similarity=0.209  Sum_probs=60.4

Q ss_pred             hccchHHHhccccc-cCCCCC-cccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++.+|+.+| +|++ | .|+.+||+.+|+.   +|     ..+++++++.+++.+|.|+||.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~~d~~-G~~i~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   78 (90)
T 1k8u_A            7 QAIGLLVAIFHKYSGREGD-KHTLSKKELKELIQKELTIG-----SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLG   78 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTEEEHHHHHHHHHHHSCCG-----GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCC-CCcCCHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            44567899999999 6999 9 9999999999998   88     678889999999999999999999999996653

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.06  E-value=3.2e-11  Score=102.53  Aligned_cols=121  Identities=11%  Similarity=0.067  Sum_probs=91.7

Q ss_pred             hccchHHHhccccc-cCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---
Q 013328          299 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  374 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---  374 (445)
                      .....++++|+.+| .|++ |.|+.+||+.+|+.+|     ..++.++++.++..+|.|++|.|+|+||+..+....   
T Consensus        10 ~~~~~l~~~F~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   83 (158)
T 2jnf_A           10 NQVKLLETAFRDFETPEGS-GRVSTDQIGIILEVLG-----IQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE   83 (158)
T ss_dssp             HHHHHHHHHHHHSBCSSSC-SSEEHHHHHHHHHHTT-----CSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHhCCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence            44567899999999 9999 9999999999999999     779999999999999999999999999997663211   


Q ss_pred             ------------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          375 ------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       375 ------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                                  .+...|.+..|.+...|.......+|..++..     ++..  ....+|.+.+|.|+.
T Consensus        84 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~D~d~dg~i~~  146 (158)
T 2jnf_A           84 VNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE-----DLDA--MIDEIDADGSGTVDF  146 (158)
T ss_dssp             CCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHH-----HHHH--HHHHHCSSCCSEECS
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHH-----HHHH--HHHHhCCCCCCcEeH
Confidence                        13445667777777777655555555433322     2222  345678888998764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.06  E-value=1.1e-11  Score=112.04  Aligned_cols=121  Identities=11%  Similarity=-0.014  Sum_probs=97.0

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----c
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~  373 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+..+..    .
T Consensus        47 ~~e~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~~~l~  120 (220)
T 3sjs_A           47 LDQYTRIYQWFMGVDRDRS-GTLEINELMMGQFPGG-----IRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAY  120 (220)
T ss_dssp             HHHHHHHHHHHHHHCTTCC-SSBCHHHHHHCCBGGG-----BCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHH
Confidence            4556788999999999999 9999999999999999     7799999999999999999999999999976532    3


Q ss_pred             CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      ..+...|.+.+|.++..|.......+|..++...     +..  ....+| +.+|.|+.
T Consensus       121 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--l~~~~d-d~dg~I~~  171 (220)
T 3sjs_A          121 NLFVMNARARSGTLEPHEILPALQQLGFYINQRT-----SLL--LHRLFA-RGMAFCDL  171 (220)
T ss_dssp             HHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHC---CCSEEH
T ss_pred             HHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhc-CCCCcCcH
Confidence            4567778889999999888777777786655432     222  445677 78888764

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.05  E-value=2.1e-10  Score=91.37  Aligned_cols=67  Identities=25%  Similarity=0.387  Sum_probs=61.3

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++.+|+.+|.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  107 (110)
T 1pva_A           38 AMSANDVKKVFKAIDADAS-GFIEEEELKFVLKSFAADG-----RDLTDAETKAFLKAADKDGDGKIGIDEFETLV  107 (110)
T ss_dssp             TSCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCTTC-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             cchHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            3456789999999999999 999999999999998   6     67899999999999999999999999999655

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=99.05  E-value=4.3e-11  Score=92.51  Aligned_cols=67  Identities=13%  Similarity=0.193  Sum_probs=58.5

Q ss_pred             hccchHHHhcccccc-CCCCC-cccHHHHHHHH-HHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKA-DNDGD-YITYSGFCEAL-EQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~-~~~~G-~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||. |++ | +|+.+||+.+| +.+|     ..++..+++.+++.+|.|+||.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~~d~d-G~~I~~~El~~~l~~~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~   76 (93)
T 1xk4_A            7 KALNSIIDVYHKYSLIKGN-FHAVYRDDLKKLLETESP-----QYIRKKGADVWFKELDINTDGAVNFQEFLILVI   76 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTCBCHHHHHHHHHHHSC-----HHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCC-cCeECHHHHHHHHHHHCc-----ccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            445678999999999 999 9 99999999999 7777     445567889999999999999999999996653

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.05  E-value=1.9e-10  Score=95.99  Aligned_cols=80  Identities=24%  Similarity=0.384  Sum_probs=67.6

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..++..+....  ......+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+
T Consensus        59 ~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~  132 (143)
T 3j04_B           59 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEAS-GFIHEDHLRELLTTMG-----DRFTDEEVDEMYREAPIDKKGNFNYV  132 (143)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSC-CCCCTTTHHHHHHTSS-----SCCCHHHHHHHHHHTTCCSSSCCCST
T ss_pred             HHHHHHHHHHhccCCcHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcCcHH
Confidence            34444444333  2345679999999999999 9999999999999999     78999999999999999999999999


Q ss_pred             HHHHHHhc
Q 013328          365 EFQQRIWK  372 (445)
Q Consensus       365 eF~~~~~~  372 (445)
                      ||++.+..
T Consensus       133 eF~~~~~~  140 (143)
T 3j04_B          133 EFTRILKH  140 (143)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhc
Confidence            99976654

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.05  E-value=3.2e-11  Score=107.24  Aligned_cols=120  Identities=18%  Similarity=0.243  Sum_probs=86.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....++++|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..      
T Consensus        34 ~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~  107 (204)
T 3e3r_A           34 SGIQGLARFFRQLDRDGS-RSLDADEFRQGLAKLG-----LVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAR  107 (204)
T ss_dssp             ------CHHHHHHCTTCC-SSBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHH
T ss_pred             hhHHHHHHHHHHHccCCC-CCcCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchH
Confidence            455789999999999999 9999999999999999     7799999999999999999999999999976533      


Q ss_pred             ----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCC---------CCCCC-CCCcceeEE
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWP---------ENYSL-SDHARLTVV  433 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~  433 (445)
                          ...+...|.+.+|.+...|........+         +|.+..|.+.         ..+|. +.+|.|+..
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~  173 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRA---------HPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLA  173 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTT---------CHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHH
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHcccc---------CCccccCCCChHHHHHHHHHHhhccCCCCcCcHH
Confidence                1234555667777777666443333222         2333333333         46887 899998753

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.05  E-value=5.2e-11  Score=101.52  Aligned_cols=122  Identities=17%  Similarity=0.202  Sum_probs=96.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..     
T Consensus        16 ~~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHHHHHHHHHTTTCSCS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence            5667889999999999999 9999999999999999     7799999999999999999999999999976532     


Q ss_pred             ---------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ---------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                               ...+...|.+..|.++..|........|..++...     +..  ....+|.+.+|.|+.
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~-----~~~--~~~~~d~~~dg~i~~  151 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED-----IED--LMKDSDKNNDGRIDF  151 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHH-----HHH--HHHHHCTTCSSSBCH
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcCcH
Confidence                     22356667888888888887666666664433322     222  344677788888763

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.05  E-value=1.6e-11  Score=103.62  Aligned_cols=121  Identities=15%  Similarity=0.145  Sum_probs=91.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC--CCceeeHHHHHHHHhccC-
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWKTT-  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~eF~~~~~~~~-  374 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|  ++|.|+|+||+..+.... 
T Consensus         6 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~   79 (151)
T 1w7j_B            6 KDQLEEFKEAFELFDRVGD-GKILYSQCGDVMRALG-----QNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAK   79 (151)
T ss_dssp             -----CHHHHHHHHCCSSS-SEEESTTHHHHHHHTT-----CCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhc
Confidence            3456779999999999999 9999999999999999     779999999999999999  999999999997664311 


Q ss_pred             ------------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          375 ------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       375 ------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                                  .+...|.+..|.+...|.......+|..++..     ++..  ....+| +.+|.|+.
T Consensus        80 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~d-~~dg~i~~  141 (151)
T 1w7j_B           80 NRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE-----EVET--VLAGHE-DSNGCINY  141 (151)
T ss_dssp             --------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHH-----HHHH--HHTTCC-CTTSEEEH
T ss_pred             cCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH-----HHHH--HHHhcc-CCCCeEeH
Confidence                        34556777778888777666666666544332     2222  445788 88998763

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.04  E-value=4.5e-10  Score=94.21  Aligned_cols=67  Identities=22%  Similarity=0.396  Sum_probs=62.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||++.+.
T Consensus        80 ~~~~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           80 AKTEDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             CCTHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHST-----TCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            345789999999999999 9999999999999999     789999999999999999999999999997664

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.04  E-value=2.1e-11  Score=102.77  Aligned_cols=121  Identities=16%  Similarity=0.196  Sum_probs=94.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      .....+.++|+.+|.|++ |.|+.+||+.+|..+|     ..++.+++..++..+|.|++|.|+|+||+..+..      
T Consensus         8 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   81 (153)
T 3ox6_A            8 EEIEELREAFREFDKDKD-GYINCRDLGNCMRTMG-----YMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET   81 (153)
T ss_dssp             HHHHHHHHHHHHHHHHCS-SSCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence            445678999999999999 9999999999999999     7799999999999999999999999999976632      


Q ss_pred             ---------cCccccccccCCcccccccccccccc-cCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ---------TTWSDQRNDLNDEDEDGFVKSSLEQT-IGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                               ...+...|.+..|.+...|....... .|..++...     +..  ....+|.+.+|.|+.
T Consensus        82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~-----~~~--~~~~~d~~~dg~i~~  144 (153)
T 3ox6_A           82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRD-----IEE--IIRDVDLNGDGRVDF  144 (153)
T ss_dssp             HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHH-----HHH--HHHHHCSSSSSSBCH
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHH-----HHH--HHHHhCCCCCCeEeH
Confidence                     12345667788888888876665555 665544322     222  334678888998763

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.04  E-value=2.3e-10  Score=90.79  Aligned_cols=66  Identities=29%  Similarity=0.455  Sum_probs=60.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++.+|+.||.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (108)
T 1rro_A           38 MSASQVKDIFRFIDNDQS-GYLDGDELKYFLQKFQSDA-----RELTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SEECTHHHHTGGGGTCTTS-----CCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            445678999999999999 999999999999998   5     67899999999999999999999999999654

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=99.04  E-value=7.5e-11  Score=87.60  Aligned_cols=66  Identities=20%  Similarity=0.349  Sum_probs=58.6

Q ss_pred             hccchHHHhcccccc-CCCCC-cccHHHHHHHHHH-hccCCCCCCC-CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKA-DNDGD-YITYSGFCEALEQ-LNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~-~~~~G-~i~~~el~~~l~~-~g~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++.+|+.||. |++ | .|+.+||+.+|+. +|     ..+ ++++++.++..+|.|++|.|+|+||+..+
T Consensus         4 ~~~~~l~~~F~~~D~~d~~-G~~i~~~el~~~l~~~~g-----~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~   73 (78)
T 1cb1_A            4 KSPAELKSIFEKYAAKEGD-PNQLSKEELKQLIQAEFP-----SLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLV   73 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSS-TTEECHHHHHHHHHHHCS-----SCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCC-cCEeCHHHHHHHHHHHhh-----hhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHH
Confidence            345678999999999 999 9 9999999999986 77     555 77889999999999999999999999655

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.04  E-value=3.8e-10  Score=114.47  Aligned_cols=122  Identities=15%  Similarity=0.143  Sum_probs=83.9

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHH----HhccCCCCCCCC----------HHHHHHHHHHhcCCCCceeeH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLA----------DEETKDLWVQADIDGNGVVDY  363 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~----------~~~~~~~~~~~d~~~~g~i~~  363 (445)
                      ......++++|+.+|.|++ |.|+.+||..++.    .+|     ..++          +++++.+|..+|.|+||.|+|
T Consensus       327 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~  400 (486)
T 3mwu_A          327 LDETKQLTEIFRKLDTNND-GMLDRDELVRGYHEFMRLKG-----VDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEY  400 (486)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHHHHHT-----CCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCH
T ss_pred             HHHHHHHHHHHHHhCCCCC-ceeeHHHHHHHHHHhhhhhc-----ccchhcccccchhhHHHHHHHHHHhcCCCCCcCcH
Confidence            3556889999999999999 9999999965554    446     4444          789999999999999999999


Q ss_pred             HHHHHHHhc----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          364 KEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       364 ~eF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      +||+..+..          ...|...|.+.+|.++.+|........|..++..     ++..  ....+|.+.||.|+.
T Consensus       401 ~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~-----~~~~--~~~~~D~d~dG~I~~  472 (486)
T 3mwu_A          401 SEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME-----ELES--IIEQVDNNKDGEVDF  472 (486)
T ss_dssp             HHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC---------------------------CCCCSSCSSSBCH
T ss_pred             HHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHH-----HHHH--HHHHhCCCCCCcEeH
Confidence            999976633          2245667888899999888777777777554433     3343  667899999999874

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.04  E-value=4.8e-10  Score=96.13  Aligned_cols=67  Identities=28%  Similarity=0.278  Sum_probs=62.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus        93 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGK-GSIKKSFLEELLTTGG-----GRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             cHHHHHHHHHHhCCCCC-cceeHHHHHHHHHHcC-----CCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            45678999999999999 9999999999999999     7899999999999999999999999999976654

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.03  E-value=2.6e-11  Score=107.04  Aligned_cols=97  Identities=16%  Similarity=0.156  Sum_probs=80.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCcc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWS  376 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~  376 (445)
                      ...++++|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.+++.+|.|++|.|+|+||+..+..    ...+
T Consensus        26 ~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~~-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~F   99 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGS-GAISVPELNAALSSAG-----VPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGF   99 (191)
T ss_dssp             TSCHHHHHHHHCTTCS-SSBCHHHHHHHHCBTT-----BCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999 9999999999997777     6789999999999999999999999999966532    3455


Q ss_pred             ccccccCCcccccccccccccccCeee
Q 013328          377 DQRNDLNDEDEDGFVKSSLEQTIGFSV  403 (445)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~g~~~  403 (445)
                      ...|.+..|.++..|.......+|..+
T Consensus       100 ~~~D~d~~G~i~~~e~~~~l~~~g~~~  126 (191)
T 1y1x_A          100 RKRDSSGDGRLDSNEVRAALLSSGYQV  126 (191)
T ss_dssp             HHHCTTSSSCBCHHHHHHHHHTTSCCC
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHhCCCC
Confidence            677888888888887766666666543

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=99.03  E-value=1.6e-10  Score=85.34  Aligned_cols=66  Identities=18%  Similarity=0.293  Sum_probs=59.1

Q ss_pred             cchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCC--CHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...++.+|+.| |.|++.|+|+.+||+.+|..+|     ..+  ++++++.++..+|.|++|.|+|+||+..+.
T Consensus         4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g-----~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~   72 (76)
T 1qx2_A            4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLG-----PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK   72 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHG-----GGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhC-----CCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            45788999999 9998548999999999999999     667  888999999999999999999999996553

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=99.03  E-value=1.2e-10  Score=87.22  Aligned_cols=67  Identities=31%  Similarity=0.445  Sum_probs=59.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++ +|+.||.|++ |+|+.+||+.+|..+|.    ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus         7 ~~~~l~-~F~~~D~d~~-G~i~~~el~~~l~~~g~----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   73 (81)
T 1c7v_A            7 EEEILR-AFKVFDANGD-GVIDFDEFKFIMQKVGE----EPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   73 (81)
T ss_dssp             CHHHHH-HHHHHSCSGG-GEECHHHHHHHSSTTTT----CCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHH-HHHHHCCCCC-CcCCHHHHHHHHHHhCC----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            446788 9999999999 99999999999998871    3478999999999999999999999999976654

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.03  E-value=9.2e-11  Score=102.39  Aligned_cols=103  Identities=13%  Similarity=0.155  Sum_probs=79.1

Q ss_pred             HHHHHHHHHhh---hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeH
Q 013328          287 EAVFGMFKCLL---RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY  363 (445)
Q Consensus       287 ~~v~~~~~~~~---~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~  363 (445)
                      ..++..+...+   ......++++|+.+|.|++ |.|+.+||+.+|..+|       .++.+++.++..+|.|++|.|+|
T Consensus        21 ~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~~g~i~~   92 (180)
T 3mse_B           21 NIIINIMAHELSVINNHIKYINELFYKLDTNHN-GSLSHREIYTVLASVG-------IKKWDINRILQALDINDRGNITY   92 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCCSEECH
T ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCCcCcH
Confidence            44444444443   4556889999999999999 9999999999999998       45789999999999999999999


Q ss_pred             HHHHHHHhcc---------CccccccccCCccccccccccccc
Q 013328          364 KEFQQRIWKT---------TWSDQRNDLNDEDEDGFVKSSLEQ  397 (445)
Q Consensus       364 ~eF~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  397 (445)
                      +||+..+...         ..+...|.+..|.+...|......
T Consensus        93 ~Ef~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~  135 (180)
T 3mse_B           93 TEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVH  135 (180)
T ss_dssp             HHHHHHHSCCTTC--CHHHHHHHHHCTTCSSCBCHHHHHHHTT
T ss_pred             HHHHHHHHhcccCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc
Confidence            9999766432         233445667777777766544333

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.02  E-value=5.1e-10  Score=94.31  Aligned_cols=67  Identities=13%  Similarity=0.121  Sum_probs=62.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        45 ~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           45 SKLEAFKVKYMEFDLNGN-GDIDIMSLKRMLEKLG-----VPKTHLELKRLIREVSSGSEETFSYSDFLRMML  111 (147)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SSEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            556779999999999999 9999999999999999     779999999999999999999999999996554

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.02  E-value=6.1e-11  Score=104.11  Aligned_cols=122  Identities=11%  Similarity=0.080  Sum_probs=93.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHH-----HHHHHhccCCCCCCCCHH-----HHHHHHHHhcCCCCceeeHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFC-----EALEQLNLTGHKHGLADE-----ETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~-----~~l~~~g~~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      .....++++|+.+|.|++ |.|+.+||+     .+|+.+|     ..++..     +++.+++.+|.|++|.|+|+||+.
T Consensus        13 ~~~~~l~~~F~~~D~d~~-G~i~~~El~~~~~~~~l~~~g-----~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   86 (191)
T 1uhk_A           13 RWIGRHKHMFNFLDVNHN-GKISLDEMVYKASDIVINNLG-----ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIE   86 (191)
T ss_dssp             HHHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHH
T ss_pred             HHHHHHHHHHhhccCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHH
Confidence            345678999999999999 999999999     8888888     666666     689999999999999999999997


Q ss_pred             HHhcc---------------------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCC
Q 013328          369 RIWKT---------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDH  427 (445)
Q Consensus       369 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (445)
                      .+...                     ..+...|.+.+|.+...|.......+|..++...     +..  ....+|.+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~d  159 (191)
T 1uhk_A           87 GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED-----CEE--TFRVCDIDES  159 (191)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHH-----HHH--HHHHSCCCTT
T ss_pred             HHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCC
Confidence            55221                     3455667888888888877666666665443322     222  3456888999


Q ss_pred             cceeEE
Q 013328          428 ARLTVV  433 (445)
Q Consensus       428 ~~~~~~  433 (445)
                      |.|+..
T Consensus       160 G~i~~~  165 (191)
T 1uhk_A          160 GQLDVD  165 (191)
T ss_dssp             SCEEHH
T ss_pred             CcCcHH
Confidence            998753

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.01  E-value=1.2e-10  Score=97.75  Aligned_cols=119  Identities=13%  Similarity=0.150  Sum_probs=91.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh---cCCCCceeeHHHHHHHHhcc--
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA---DIDGNGVVDYKEFQQRIWKT--  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~---d~~~~g~i~~~eF~~~~~~~--  373 (445)
                      .....++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.+++..++..+   |.|+ |.|+|+||+..+...  
T Consensus         5 ~~~~~l~~~F~~~D~~~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~   77 (149)
T 2mys_C            5 AAADDFKEAFLLFDRTGD-AKITASQVGDIARALG-----QNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAAN   77 (149)
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhc
Confidence            345678999999999999 9999999999999999     778999999999999   9999 999999999766432  


Q ss_pred             -----------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                                 ..+...|.+..|.+...+.......+|..++...     +..  .... |.+.+|.|+.
T Consensus        78 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~-d~~~dg~i~~  139 (149)
T 2mys_C           78 NKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE-----VEE--LMKG-QEDSNGCINY  139 (149)
T ss_pred             cCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHH-----HHH--HHhh-CCCCCCcEeH
Confidence                       2345567777788887776666666665433322     222  3334 7788898764

>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens}

Probab=99.01  E-value=7.2e-10  Score=106.58  Aligned_cols=171  Identities=12%  Similarity=0.031  Sum_probs=92.6

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcE--EEEeecccChhhHHHHHHHHhhccCccE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSI--ICLQEFWVGNEELVDMYEKRLSDAGYVN  105 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DI--I~LQEv~~~~~~~~~~l~~~l~~~gy~~  105 (445)
                      -++.|+||||.+....   +      ..-.      ..+...+....|||  |+|||+......+.+.+.+.|+ ..|..
T Consensus        26 l~i~v~TwNv~g~~~~---~------~~L~------~~l~~~~~~~~pDI~viGlQEi~~~~~~W~~~l~~~L~-~~Y~~   89 (357)
T 2xsw_A           26 VALFVATWNMQGQKEL---P------PSLD------EFLLPAEADYAQDLYVIGVQEGCSDRREWETRLQETLG-PHYVL   89 (357)
T ss_dssp             EEEEEEEEECTTCSSC---C------SCCH------HHHSCTTCCSCCSEEEEEEESCCSCHHHHHHHHHHHHC-TTEEE
T ss_pred             ceEEEEEEecCCCCCC---c------ccHH------HHhccccccCCCCEEEEEeeeccchHHHHHHHHHHHhC-Ccccc
Confidence            4688999999853100   0      0000      11111223467996  8999997555567777777775 34544


Q ss_pred             EEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChh
Q 013328          106 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  185 (445)
Q Consensus       106 ~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~  185 (445)
                      +..  ..-.+.+++||.|....+.+.........++  .+.  .. .......+++...+..|+++|+||.+..  ....
T Consensus        90 v~s--~~l~g~~l~Vfvr~~~~~~i~~v~~~~v~tG--~~g--~~-gNKGav~vr~~~~~t~~~Fvn~HLaa~~--~~~~  160 (357)
T 2xsw_A           90 LSS--AAHGVLYMSLFIRRDLIWFCSEVECSTVTTR--IVS--QI-KTKGALGISFTFFGTSFLFITSHFTSGD--GKVA  160 (357)
T ss_dssp             EEE--EEETTEEEEEEEEGGGGGGBBCCEEEEEEEE--EEE--TT-EEEEEEEEEEEETTEEEEEEEEECCCST--TCHH
T ss_pred             hhh--hhhhhEEEEEEEchHHhhcCceeEecccccc--ccc--cc-ccccEEEEEEEECCeEEEEEEEccCCCC--chHH
Confidence            322  2223457889977764332222111111110  000  00 0001112334446789999999998754  3356


Q ss_pred             hHHHHHHHHHHHHHHHHHHc-------------CCCCCcEEEeecCCCCcCc
Q 013328          186 VRLHQVYKILQHVESYQKEH-------------NLKPIPIILCGDWNGSKRG  224 (445)
Q Consensus       186 ~R~~q~~~l~~~l~~~~~~~-------------~~~~~pvIl~GDFN~~p~s  224 (445)
                      .|..+...+++.+.-- ...             .....++|++||||.-.+.
T Consensus       161 ~Rn~d~~~I~~~l~f~-~~~~~~~~~~~~~~~~~~~~d~vfw~GDlNyRi~~  211 (357)
T 2xsw_A          161 ERLLDYTRTVQALVLP-RNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSG  211 (357)
T ss_dssp             HHHHHHHHHHHHCCCC-SSSCCSSGGGCBTTBGGGSSSEEEEEEECCCCBSS
T ss_pred             HHHHHHHHHHHHhccc-ccccccccccccccccccccceEEEecccCccccc
Confidence            7888888877655310 000             0023579999999987664

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.01  E-value=5.2e-11  Score=101.18  Aligned_cols=116  Identities=12%  Similarity=0.165  Sum_probs=91.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ..+..+++++|+.||+|++ |+|+.+||+.+|+.+|     ..++++++..++.    +++|.|+|+||+..+..     
T Consensus        12 ~~qi~elk~~F~~~D~d~d-G~I~~~El~~~l~~lg-----~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~   81 (153)
T 3i5g_B           12 QRQMQELKEAFTMIDQDRD-GFIGMEDLKDMFSSLG-----RVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGT   81 (153)
T ss_dssp             HHHHHHHHHHHHHHCCSTT-SCCCHHHHHHHHHHTT-----SCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-----CCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccc
Confidence            4667889999999999999 9999999999999999     8899999888775    45678999999966533     


Q ss_pred             ------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                            ...|...|.+..|.+...+.......+|.+++...     +..  ....+|.+ +|.++
T Consensus        82 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e-----i~~--~~~~~D~~-dG~I~  138 (153)
T 3i5g_B           82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE-----IKN--VWKDAPLK-NKQFN  138 (153)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHH-----HHH--HHTTCCEE-TTEEC
T ss_pred             ccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHH-----HHH--HHHHhCCC-cCEEc
Confidence                  12356778889999999988877778887666544     222  34567776 88765

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.01  E-value=5.1e-10  Score=94.66  Aligned_cols=68  Identities=12%  Similarity=0.169  Sum_probs=62.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....++++|+.||.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus        47 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           47 EKLTAFKEKYMEFDLNNE-GEIDLMSLKRMMEKLG-----VPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCCCCc-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            445678999999999999 9999999999999999     7799999999999999999999999999976654

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=99.00  E-value=2.2e-10  Score=86.27  Aligned_cols=68  Identities=24%  Similarity=0.332  Sum_probs=58.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |+|+.+||+.++..+|.   ...+++++++.    ++..+|.|+||.|+|+||++.+
T Consensus         4 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~   75 (83)
T 1yx7_A            4 KVKAELEAAFKKLDANGD-GYVTALELQTFMVTLDA---YKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNAN   75 (83)
T ss_dssp             CSCTHHHHHHHHHSSSCS-SSCSHHHHHHHHHHHTT---CTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHH
T ss_pred             cHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHcc---ccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhh
Confidence            345678999999999999 99999999999999871   02366777888    9999999999999999999544

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.00  E-value=8.3e-10  Score=93.87  Aligned_cols=78  Identities=21%  Similarity=0.304  Sum_probs=66.1

Q ss_pred             HHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHH
Q 013328          288 AVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE  365 (445)
Q Consensus       288 ~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e  365 (445)
                      .|+..+....  ......+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+|
T Consensus        80 eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~e  153 (161)
T 3fwb_A           80 DFYIVMGEKILKRDPLDEIKRAFQLFDDDHT-GKISIKNLRRVAKELG-----ETLTDEELRAMIEEFDLDGDGEINENE  153 (161)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCSSSSSSEEHHH
T ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHcCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence            3444443333  3345778999999999999 9999999999999999     789999999999999999999999999


Q ss_pred             HHHHHh
Q 013328          366 FQQRIW  371 (445)
Q Consensus       366 F~~~~~  371 (445)
                      |++.+.
T Consensus       154 F~~~~~  159 (161)
T 3fwb_A          154 FIAICT  159 (161)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            997653

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.00  E-value=1e-09  Score=94.25  Aligned_cols=67  Identities=24%  Similarity=0.357  Sum_probs=61.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus        99 ~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNS-GTITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             cHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            45678899999999999 9999999999999999     8899999999999999999999999999976543

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.00  E-value=4.4e-11  Score=105.48  Aligned_cols=122  Identities=12%  Similarity=0.076  Sum_probs=89.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHH-----HHHHHhccCCCCCCCCHH-----HHHHHHHHhcCCCCceeeHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFC-----EALEQLNLTGHKHGLADE-----ETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~-----~~l~~~g~~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      .....++++|+.+|.|++ |.|+.+||+     .+|+.+|     ..++..     +++.++..+|.|++|.|+|+||+.
T Consensus        17 ~~~~~l~~~F~~~D~d~~-G~i~~~El~~~~~~~~l~~~g-----~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   90 (195)
T 1qv0_A           17 RWIKRHKHMFDFLDINGN-GKITLDEIVSKASDDICAKLE-----ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD   90 (195)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTHHHHTT-----CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             HHHHHHHHHHhHcCCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence            445678999999999999 999999999     7888888     556665     689999999999999999999996


Q ss_pred             HHhcc---------------------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCC
Q 013328          369 RIWKT---------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDH  427 (445)
Q Consensus       369 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (445)
                      .+...                     ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~d  163 (195)
T 1qv0_A           91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED-----CEA--TFRHCDLDNA  163 (195)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHH-----HHH--HHHHSCCCTT
T ss_pred             HHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCC
Confidence            55210                     3456667788888888887666666665444332     222  3456888999


Q ss_pred             cceeEE
Q 013328          428 ARLTVV  433 (445)
Q Consensus       428 ~~~~~~  433 (445)
                      |.|+..
T Consensus       164 g~i~~~  169 (195)
T 1qv0_A          164 GDLDVD  169 (195)
T ss_dssp             SCEEHH
T ss_pred             CcCCHH
Confidence            998753

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.00  E-value=3.3e-11  Score=103.14  Aligned_cols=120  Identities=6%  Similarity=-0.022  Sum_probs=92.8

Q ss_pred             hhccchHHHhcccccc--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc---
Q 013328          298 RRASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK---  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~---  372 (445)
                      .++..+++++|..||.  |++ |+|+..||+.+|+.+|     ..+++++++.++. .|.+++|.|+|+||+..+..   
T Consensus         5 ~eqi~elre~F~~fD~~~d~d-G~I~~~El~~~lr~lG-----~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~   77 (159)
T 3i5g_C            5 KDEIEEVREVFDLFDFWDGRD-GDVDAAKVGDLLRCLG-----MNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSS   77 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHCcCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhc
Confidence            4566789999999995  899 9999999999999999     7899999998764 57889999999999976532   


Q ss_pred             ----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCC--CCCccee
Q 013328          373 ----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSL--SDHARLT  431 (445)
Q Consensus       373 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  431 (445)
                                ...|...|.+..|.+...+.......+|..++...+     ..  ....+|+  +.+|.++
T Consensus        78 ~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~-----~~--l~~~~D~~~d~dG~I~  141 (159)
T 3i5g_C           78 KDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQC-----ND--IFTFCDIREDIDGNIK  141 (159)
T ss_dssp             CCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHH-----HH--HHHHTTCCCCSSCCEE
T ss_pred             ccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHH-----HH--HHHHhCcCCCCCCeEe
Confidence                      113566788889999998887777888877665442     22  2233454  6678765

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.99  E-value=6.2e-11  Score=104.15  Aligned_cols=132  Identities=14%  Similarity=0.148  Sum_probs=97.0

Q ss_pred             hHHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHh-----------ccCCCCCCCCHHHHHHHHHH
Q 013328          286 SEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL-----------NLTGHKHGLADEETKDLWVQ  352 (445)
Q Consensus       286 ~~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-----------g~~~~~~~~~~~~~~~~~~~  352 (445)
                      ...++..+...+  ......+.++|+.+|.|++ |.|+.+||..+|..+           |     ..++.++++.++..
T Consensus        22 ~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   95 (191)
T 3khe_A           22 AQAAMLFMGSKLTTLEETKELTQIFRQLDNNGD-GQLDRKELIEGYRKLMQWKGDTVSDLD-----SSQIEAEVDHILQS   95 (191)
T ss_dssp             HHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHC-----CCHHH-----HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHHhhccccccccc-----chhhHHHHHHHHHH
Confidence            455556555555  4666899999999999999 999999999999987           5     45778899999999


Q ss_pred             hcCCCCceeeHHHHHHHHhc----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCC
Q 013328          353 ADIDGNGVVDYKEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY  422 (445)
Q Consensus       353 ~d~~~~g~i~~~eF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  422 (445)
                      +|.|++|.|+|+||+..+..          ...+...|.+.+|.+...|......  |..++.     .++..  ....+
T Consensus        96 ~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~-----~~~~~--~~~~~  166 (191)
T 3khe_A           96 VDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDD-----ETWHQ--VLQEC  166 (191)
T ss_dssp             TCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCH-----HHHHH--HHHHH
T ss_pred             hCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCH-----HHHHH--HHHHh
Confidence            99999999999999976532          2244566777778777777544333  322222     22222  34567


Q ss_pred             CCCCCcceeE
Q 013328          423 SLSDHARLTV  432 (445)
Q Consensus       423 ~~~~~~~~~~  432 (445)
                      |.+.+|.|+.
T Consensus       167 D~~~dg~i~~  176 (191)
T 3khe_A          167 DKNNDGEVDF  176 (191)
T ss_dssp             CTTCSSSEEH
T ss_pred             CCCCCCCCCH
Confidence            8888998864

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.99  E-value=5.7e-10  Score=97.34  Aligned_cols=68  Identities=16%  Similarity=0.191  Sum_probs=60.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHH-HhccCCCCCC-C------CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALE-QLNLTGHKHG-L------ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~-~~g~~~~~~~-~------~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++.+|+.||+|++ |+|+.+||+.+|. .+|     .. +      ++++++.++..+|.|+||.|+|+||+..+
T Consensus        95 ~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~  168 (179)
T 3a8r_A           95 GFDNRLRTFFDMVDKNAD-GRLTAEEVKEIIALSAS-----ANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALL  168 (179)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHHhc-----cccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            445689999999999999 9999999999999 888     55 4      77899999999999999999999999665


Q ss_pred             hc
Q 013328          371 WK  372 (445)
Q Consensus       371 ~~  372 (445)
                      ..
T Consensus       169 ~~  170 (179)
T 3a8r_A          169 LQ  170 (179)
T ss_dssp             C-
T ss_pred             Hh
Confidence            43

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.98  E-value=5.2e-11  Score=103.00  Aligned_cols=120  Identities=10%  Similarity=0.068  Sum_probs=89.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTW  375 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~  375 (445)
                      ....++++|+.+|.|++ |.|+.+||+.+|+.+|.    .+++.++++.++..+|.|++|.|+|+||+..+..    ...
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~----~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~   79 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRS-GVISDTELQQALSNGTW----TPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV   79 (172)
T ss_dssp             -CHHHHHHHHHHCTTCS-SCEEHHHHHHHCCCSSS----SCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHhCCCCC-CcCcHHHHHHHHHhcCC----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence            34678999999999999 99999999999998762    4588999999999999999999999999965532    345


Q ss_pred             cccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          376 SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                      +...|.+..|.++..|.......+|..++...     +..  ....+|.+.+|.|+
T Consensus        80 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~~~dg~i~  128 (172)
T 2znd_A           80 FRTYDRDNSGMIDKNELKQALSGFGYRLSDQF-----HDI--LIRKFDRQGRGQIA  128 (172)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCTTCSSSEE
T ss_pred             HHHHCCCCCCccCHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCcCc
Confidence            66778888888888887666666665433222     111  22345555666554

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.98  E-value=4.9e-11  Score=98.03  Aligned_cols=112  Identities=14%  Similarity=0.121  Sum_probs=83.9

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh---c--------
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW---K--------  372 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~---~--------  372 (445)
                      ++++|+.+|.|++ |.|+.+||..++..+|     ..++.++++.+++.+|.|++|.|+|+||+..+.   .        
T Consensus         2 l~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~   75 (134)
T 1jfj_A            2 AEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHHHCTTCS-SEEEHHHHHHHHHTTC-----CSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHH
Confidence            6789999999999 9999999999999998     778899999999999999999999999997663   1        


Q ss_pred             --cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 --TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 --~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                        ...+...|.+..|.+...|.......+|...         +..  ....+|.+.+|.|+.
T Consensus        76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~---------~~~--~~~~~D~~~dg~i~~  126 (134)
T 1jfj_A           76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---------VAE--QVMKADANGDGYITL  126 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH---------HHH--HHHHHHCSSSSEEEH
T ss_pred             HHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH---------HHH--HHHHhCCCCCCcEeH
Confidence              1233445666667776666554444444322         111  334567778887753

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.98  E-value=1.5e-09  Score=91.96  Aligned_cols=67  Identities=19%  Similarity=0.350  Sum_probs=62.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH--hcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ--ADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~--~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..  +|.|++|.|+|+||+..+..
T Consensus        82 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           82 TFADYMEAFKTFDREGQ-GFISGAELRHVLTALG-----ERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             CHHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence            34678999999999999 9999999999999999     78999999999999  99999999999999977755

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.98  E-value=8.1e-11  Score=99.86  Aligned_cols=120  Identities=9%  Similarity=0.010  Sum_probs=92.7

Q ss_pred             hccchHHHhcccccc--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc---
Q 013328          299 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT---  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~---  373 (445)
                      .....++++|+.+|.  |++ |.|+.+||+.+|..+|     ..++.+++..+ ..+|.|++|.|+|+||+..+...   
T Consensus         6 ~~~~~l~~~F~~~D~~~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~   78 (156)
T 1wdc_C            6 DEIDDLKDVFELFDFWDGRD-GAVDAFKLGDVCRCLG-----INPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC   78 (156)
T ss_dssp             HHHHHHHHHHHHHHHHTCSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHccCCCCC-CCCcHHHHHHHHHHcC-----CCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc
Confidence            445678999999999  999 9999999999999999     77999999999 99999999999999999766432   


Q ss_pred             ---------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCC--CCCCCCcceeE
Q 013328          374 ---------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN--YSLSDHARLTV  432 (445)
Q Consensus       374 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  432 (445)
                               ..+...|.+..|.+...|.......+|..++...     +..  ....  +|.+.+|.|+.
T Consensus        79 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~~~D~d~dg~i~~  141 (156)
T 1wdc_C           79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED-----VDE--IIKLTDLQEDLEGNVKY  141 (156)
T ss_dssp             CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHHTCCCCTTSEEEH
T ss_pred             cCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCCCcEeH
Confidence                     1245667777888887776666666665433322     222  3345  78888998764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.98  E-value=1.1e-09  Score=92.94  Aligned_cols=79  Identities=19%  Similarity=0.322  Sum_probs=66.5

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..|+..+...+  ......+..+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.| +|.|+|+
T Consensus        70 ~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~-dg~i~~~  142 (156)
T 1wdc_B           70 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQET-KKLNIEYIKDLLENMG-----DNFNKDEMRMTFKEAPVE-GGKFDYV  142 (156)
T ss_dssp             HHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHCCEE-TTEECHH
T ss_pred             HHHHHHHHHHhcCCChHHHHHHHHHHHCcCCC-CccCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCCC-CCEEeHH
Confidence            34444444333  2344678999999999999 9999999999999999     789999999999999999 9999999


Q ss_pred             HHHHHHhc
Q 013328          365 EFQQRIWK  372 (445)
Q Consensus       365 eF~~~~~~  372 (445)
                      ||++.+..
T Consensus       143 eF~~~~~~  150 (156)
T 1wdc_B          143 KFTAMIKG  150 (156)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99977755

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.97  E-value=9.7e-11  Score=97.76  Aligned_cols=117  Identities=11%  Similarity=0.137  Sum_probs=92.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      .....++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++.+++..++..    ++|.|+|+||+..+...     
T Consensus         4 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~   73 (143)
T 3j04_B            4 SQIQEFKEAFNMIDQNRD-GFIDKEDLHDMLASMG-----KNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTD   73 (143)
T ss_dssp             HHHHHHHHHHTTTCSSCT-TCCCHHHHHHHHHHTS-----CCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSC
T ss_pred             HHHHHHHHHHHHhCCCCC-CCcCHHHHHHHHHHhC-----CCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCC
Confidence            345678999999999999 9999999999999999     77999999988866    89999999999776432     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                            ..+...|.+.+|.+...|.......+|..++...     +..  ....+|.+.+|.|+.
T Consensus        74 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dg~i~~  131 (143)
T 3j04_B           74 PEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEE-----VDE--MYREAPIDKKGNFNY  131 (143)
T ss_dssp             CHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHH-----HHH--HHHHTTCCSSSCCCS
T ss_pred             cHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHcCCCCCCcCcH
Confidence                  2346678888888888887777777776544332     222  445678889998864

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.97  E-value=1.1e-10  Score=115.17  Aligned_cols=121  Identities=16%  Similarity=0.236  Sum_probs=99.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      .....++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.+++.+|.|++|.|+|+||+..+...     
T Consensus       309 eei~el~~~F~~fD~D~d-G~Is~~EL~~~L~~lg-----~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~  382 (450)
T 3sg6_A          309 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD  382 (450)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence            345689999999999999 9999999999999999     77999999999999999999999999999666431     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                            ..+...|.+.+|.+...|.......+|..++...     +..  ....||.+.+|.|+.
T Consensus       383 ~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~ee-----i~~--Lf~~~D~D~DG~Isf  440 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVNY  440 (450)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCTTSSSSEEH
T ss_pred             hhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEeH
Confidence                  2467778889999999888877777887655443     222  345688889998764

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.97  E-value=8.1e-11  Score=101.81  Aligned_cols=119  Identities=13%  Similarity=0.099  Sum_probs=88.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHH----HHHHhccCCCCCCCCHHHHH-----------HHHHHhcCCCCceeeHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCE----ALEQLNLTGHKHGLADEETK-----------DLWVQADIDGNGVVDYK  364 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~----~l~~~g~~~~~~~~~~~~~~-----------~~~~~~d~~~~g~i~~~  364 (445)
                      ....++++|+.+|.|++ |.|+.+||+.    +++.+|     ..++.++++           .++..+|.|++|.|+|+
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~~~~~l~~~g-----~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~   78 (176)
T 1nya_A            5 ASDRLKKRFDRWDFDGN-GALERADFEKEAQHIAEAFG-----KDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEE   78 (176)
T ss_dssp             HHHHHHHHHHHCCSSCC-SSBCSHHHHHHHHHHHHHTS-----SCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHH
T ss_pred             HHHHHHHHHHHHcCCCC-CcccHHHHHHHHHHHHHHcC-----CCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHH
Confidence            45678999999999999 9999999999    688889     778888877           88899999999999999


Q ss_pred             HHHHHHhcc------------------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCC
Q 013328          365 EFQQRIWKT------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSD  426 (445)
Q Consensus       365 eF~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (445)
                      ||+..+...                  ..+...|.+..|.++..|.......+|  ++     ..++..  ....+|.+.
T Consensus        79 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~-----~~~~~~--~~~~~D~d~  149 (176)
T 1nya_A           79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MS-----KAEAAE--AFNQVDTNG  149 (176)
T ss_dssp             HHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CC-----HHHHHH--HHHHHCTTC
T ss_pred             HHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CC-----HHHHHH--HHHHhCCCC
Confidence            999765321                  123455667777777777655555555  12     222222  345678888


Q ss_pred             CcceeEE
Q 013328          427 HARLTVV  433 (445)
Q Consensus       427 ~~~~~~~  433 (445)
                      +|.|+..
T Consensus       150 dg~i~~~  156 (176)
T 1nya_A          150 NGELSLD  156 (176)
T ss_dssp             SSEEEHH
T ss_pred             CCCCcHH
Confidence            9987753

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.97  E-value=1.2e-09  Score=92.65  Aligned_cols=67  Identities=25%  Similarity=0.448  Sum_probs=62.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||++.+.
T Consensus        88 ~~~~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  154 (158)
T 2jnf_A           88 QMQQELREAFRLYDKEGN-GYISTDVMREILAELD-----ETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT  154 (158)
T ss_dssp             TTSSTHHHHHHHHCSSSS-SSEEHHHHHHHHHHHC-----TTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred             hHHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhC-----CcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            456789999999999999 9999999999999999     789999999999999999999999999996553

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.96  E-value=8.7e-10  Score=91.73  Aligned_cols=65  Identities=18%  Similarity=0.311  Sum_probs=59.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||++.+
T Consensus        76 ~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C           76 TSEDILRQAFRTFDPEGT-GYIPKAALQDALLNLG-----DRLKPHEFAEFLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             CCHHHHHHHHHHTCCSSC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred             ChHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence            355678999999999999 9999999999999999     7899999999999999 999999999998543

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.96  E-value=1.1e-10  Score=102.58  Aligned_cols=120  Identities=13%  Similarity=0.106  Sum_probs=90.7

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHHHH-----------HHhcCCCCceee
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKDLW-----------VQADIDGNGVVD  362 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~~~-----------~~~d~~~~g~i~  362 (445)
                      .....++++|+.+ |.|++ |.|+.+||+.++..+    |     ..++.++++.++           ..+|.|+||.|+
T Consensus         9 ~~~~~l~~~F~~~~D~d~d-G~i~~~E~~~~l~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            9 FQRNKILRVFNTFYDCNHD-GVIEWDDFELAIKKICNLHS-----WPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             HHHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHHHT-----CCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             HHHHHHHHhccccccCCCC-CeeeHHHHHHHHHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            3446789999999 99999 999999999999998    8     678888899998           999999999999


Q ss_pred             HHHHHHHHhcc-------------------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCC
Q 013328          363 YKEFQQRIWKT-------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYS  423 (445)
Q Consensus       363 ~~eF~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  423 (445)
                      |+||+..+...                   ..+...|.+.+|.++..|.......+|  ++     +.++..  ....+|
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~-----~~~~~~--~~~~~D  153 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IP-----KSDCDA--AFDTLS  153 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CC-----HHHHHH--HHHHHT
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CC-----HHHHHH--HHHHhC
Confidence            99998665321                   123455777778887777655555555  11     222222  445788


Q ss_pred             CCCCcceeEE
Q 013328          424 LSDHARLTVV  433 (445)
Q Consensus       424 ~~~~~~~~~~  433 (445)
                      .+.+|.|+..
T Consensus       154 ~d~dG~i~~~  163 (191)
T 2ccm_A          154 DGGKTMVTRE  163 (191)
T ss_dssp             TTTTSCCBHH
T ss_pred             CCCCCCcCHH
Confidence            8999998754

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.96  E-value=1.6e-09  Score=90.41  Aligned_cols=65  Identities=20%  Similarity=0.404  Sum_probs=60.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||++.+
T Consensus        81 ~~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l  145 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDEMLREVS-DGSGEINIKQFAALL  145 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred             CcHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence            344678899999999999 9999999999999999     7899999999999999 999999999999654

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.95  E-value=3.9e-10  Score=88.04  Aligned_cols=66  Identities=20%  Similarity=0.288  Sum_probs=58.0

Q ss_pred             hccchHHHhccccc-cCCCCC-cccHHHHHHHHHH-h----ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-L----NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D-~~~~~G-~i~~~el~~~l~~-~----g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.|| .|++ | +|+.+||+.+|.. +    |     ..+++++++.++..+|.|+||.|+|+||+..+
T Consensus        10 ~~~~~l~~~F~~~Dd~d~~-G~~I~~~el~~~l~~~~~~~~~-----~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~   82 (99)
T 1qls_A           10 RCIESLIAIFQKHAGRDGN-NTKISKTEFLIFMNTELAAFTQ-----NQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI   82 (99)
T ss_dssp             HHHHHHHHHHHHHHTTSSC-TTCBCHHHHHHHHTTTSHHHHH-----HCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCC-cCeeCHHHHHHHHHHHcchhcc-----ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            44567899999998 9999 9 9999999999984 3    4     45788899999999999999999999999655

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.95  E-value=6.9e-10  Score=98.25  Aligned_cols=79  Identities=19%  Similarity=0.261  Sum_probs=66.6

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..|+..+...+  ......+..+|+.||.|++ |+|+.+||+.+| .+|     ..+++++++.++..+|.|+||.|+|+
T Consensus       109 ~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~Is~~El~~~l-~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~  181 (196)
T 3dtp_E          109 TMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDG-KCKEETLKRSLT-TWG-----EKFSQDEVDQALSEAPIDGNGLIDIK  181 (196)
T ss_dssp             HHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSS-CCBHHHHHHHHH-HSS-----SCCCHHHHHHHHHSSCEETTEECHHH
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCC-CcCcHHHHHHHH-HcC-----CCCCHHHHHHHHHHcCCCCCCEEeHH
Confidence            44555544433  2345678999999999999 999999999999 999     78999999999999999999999999


Q ss_pred             HHHHHHhc
Q 013328          365 EFQQRIWK  372 (445)
Q Consensus       365 eF~~~~~~  372 (445)
                      ||+..|..
T Consensus       182 EF~~~l~~  189 (196)
T 3dtp_E          182 KFAQILTK  189 (196)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHHHHc
Confidence            99976644

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.95  E-value=3.6e-10  Score=115.13  Aligned_cols=125  Identities=14%  Similarity=0.092  Sum_probs=92.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc--
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK--  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~--  372 (445)
                      .....+++++|+.+|.|++ |.|+.+||..+|..++-...   ....++++++.+++.+|.|+||.|+|+||+..+..  
T Consensus       351 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  429 (504)
T 3q5i_A          351 LEERKELTDIFKKLDKNGD-GQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ  429 (504)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHeeCCCCC-CeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhh
Confidence            4556789999999999999 99999999999998820000   04577899999999999999999999999976643  


Q ss_pred             --------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 --------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                              ...|...|.+.+|.++.+|........+       +...++..  ....+|.+.||.|+.
T Consensus       430 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~-------~~~~~~~~--~~~~~D~d~dG~I~~  488 (504)
T 3q5i_A          430 ILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS-------ISEKTWND--VLGEADQNKDNMIDF  488 (504)
T ss_dssp             HHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC-------CCHHHHHH--HHHTTCSSCSSSEEH
T ss_pred             cccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC-------CCHHHHHH--HHHHhCCCCCCcEeH
Confidence                    2345666788888888777544333222       11223333  456889999999874

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.94  E-value=7.9e-10  Score=95.95  Aligned_cols=76  Identities=11%  Similarity=0.072  Sum_probs=64.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----c
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  373 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~  373 (445)
                      ..++++|+.|| |++ |+|+.+||+.+|+.+    |     ..+++++++.++..+| |++|.|+|+||+..+..    .
T Consensus        76 ~~l~~aF~~fD-d~~-G~I~~~El~~~l~~l~~~~G-----~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~  147 (174)
T 2i7a_A           76 VHYQHVFQKVQ-TSP-GVLLSSDLWKAIENTDFLRG-----IFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMA  147 (174)
T ss_dssp             HHHHHHHHHHC-SBT-TBEEGGGHHHHHHTCGGGTT-----CCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCC-CcCCHHHHHHHHHHhHhccC-----CCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHH
Confidence            46889999999 999 999999999999999    8     7799999999999999 99999999999976643    2


Q ss_pred             CccccccccCCc
Q 013328          374 TWSDQRNDLNDE  385 (445)
Q Consensus       374 ~~~~~~~~~~~~  385 (445)
                      ..+...|.+..|
T Consensus       148 ~~F~~~D~d~~G  159 (174)
T 2i7a_A          148 KTFRNLSKDGKG  159 (174)
T ss_dssp             HHHHHHCSSSSC
T ss_pred             HHHHHhCCCCCC
Confidence            334555666665

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.94  E-value=1e-09  Score=91.46  Aligned_cols=67  Identities=22%  Similarity=0.396  Sum_probs=61.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus        74 ~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGN-GTIQEAELRQLLLNLG-----DALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GHHHHHHHHHHHCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            34678999999999999 9999999999999999     7799999999999999999999999999977654

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=98.94  E-value=2.2e-09  Score=90.15  Aligned_cols=64  Identities=27%  Similarity=0.482  Sum_probs=59.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+..+|+.+|.|++ |.|+.+||+.+|.. +|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus        87 ~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  151 (153)
T 3ox6_A           87 VKELRDAFREFDTNGD-GEISTSELREAMRALLG-----HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM  151 (153)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHHS-----SCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhc-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            4678999999999999 99999999999999 78     78999999999999999999999999999654

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.94  E-value=1e-09  Score=92.36  Aligned_cols=63  Identities=17%  Similarity=0.377  Sum_probs=57.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+..+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||++.+
T Consensus        86 ~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  148 (151)
T 1w7j_B           86 YEDYLEGFRVFDKEGN-GKVMGAELRHVLTTLG-----EKMTEEEVETVLAGHE-DSNGCINYEAFLKHI  148 (151)
T ss_dssp             --CCHHHHHTTCTTSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHH
Confidence            4567889999999999 9999999999999999     7899999999999999 999999999999755

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.93  E-value=2.6e-10  Score=95.21  Aligned_cols=113  Identities=17%  Similarity=0.168  Sum_probs=88.6

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---------
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---------  374 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---------  374 (445)
                      ++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++.+++..++..   |++|.|+|+||+..+....         
T Consensus         7 l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~   77 (145)
T 2bl0_B            7 IQECFQIFDKDND-GKVSIEELGSALRSLG-----KNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKE   77 (145)
T ss_dssp             HHHHHHHHCTTCS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHH
T ss_pred             HHHHHHHhCCCCc-CccCHHHHHHHHHHhC-----CCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHH
Confidence            8999999999999 9999999999999999     77899999999988   8899999999997664321         


Q ss_pred             ---ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          375 ---WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       375 ---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                         .+...|.+..|.+...|.......+|..++..     ++..  ....+|.+.+|.|+.
T Consensus        78 l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~-----~~~~--~~~~~d~~~dg~i~~  131 (145)
T 2bl0_B           78 MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSS-----EVEE--LMKEVSVSGDGAINY  131 (145)
T ss_dssp             HHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHH-----HHHH--HHTTCCCCTTSEEEH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHH-----HHHH--HHHHcCCCCCCcEeH
Confidence               23555777788888877766666666543332     2222  446788899998764

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.93  E-value=2.5e-09  Score=89.49  Aligned_cols=76  Identities=21%  Similarity=0.281  Sum_probs=63.6

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..|+..+...+  ......+..+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+  |+||.|+|+
T Consensus        67 ~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~  138 (146)
T 2qac_A           67 EQYLEYLSICVHDKDNVEELIKMFAHFDNNCT-GYLTKSQMKNILTTWG-----DALTDQEAIDALNAF--SSEDNIDYK  138 (146)
T ss_dssp             HHHHHHHHHTCCTTCCHHHHHHHHHTTCTTCS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHH--CSSSEEEHH
T ss_pred             HHHHHHHHHHhcCcchHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHc--CCCCcCcHH
Confidence            34444444333  2335678999999999999 9999999999999999     789999999999999  999999999


Q ss_pred             HHHHHH
Q 013328          365 EFQQRI  370 (445)
Q Consensus       365 eF~~~~  370 (445)
                      ||+..|
T Consensus       139 eF~~~l  144 (146)
T 2qac_A          139 LFCEDI  144 (146)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999765

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.93  E-value=2.2e-09  Score=89.81  Aligned_cols=66  Identities=17%  Similarity=0.321  Sum_probs=60.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++.. |.|++|.|+|+||++.+.
T Consensus        82 ~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~  147 (149)
T 2mys_C           82 GTFEDFVEGLRVFDKEGN-GTVMGAELRHVLATLG-----EKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  147 (149)
T ss_pred             chHHHHHHHHHHhCCCCC-ceEcHHHHHHHHHHhC-----CCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence            345678999999999999 9999999999999999     78999999999999 999999999999997664

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.93  E-value=1.4e-10  Score=100.39  Aligned_cols=102  Identities=14%  Similarity=0.138  Sum_probs=80.3

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCC--CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----c
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTG--HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~--~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~  373 (445)
                      ..+++++|+.+| |++ |.|+.+||+.+|+.+ |...  ....++.++++.++..+|.|++|.|+|+||+..+..    .
T Consensus         3 ~~~l~~~F~~~D-d~~-G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   80 (173)
T 1alv_A            3 VRQFRRLFAQLA-GDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ   80 (173)
T ss_dssp             HHHHHHHHHHHH-GGG-TSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh-CCC-CCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHH
Confidence            457899999999 999 999999999999997 5110  003478899999999999999999999999965532    3


Q ss_pred             CccccccccCCcccccccccccccccCeeee
Q 013328          374 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVK  404 (445)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  404 (445)
                      ..+...|.+..|.++..|.......+|..++
T Consensus        81 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~  111 (173)
T 1alv_A           81 AIYKQFDVDRSGTIGSSELPGAFEAAGFHLN  111 (173)
T ss_dssp             HHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHcCCCCC
Confidence            4566778888888888887666666665443

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.92  E-value=1.8e-10  Score=91.46  Aligned_cols=67  Identities=27%  Similarity=0.432  Sum_probs=61.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++.+|+.||.|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  106 (108)
T 2kyc_A           37 KKSSSQLKEIFRILDNDQS-GFIEEDELKYFLQRFESGA-----RVLTASETKTFLAAADHDGDGKIGAEEFQEMV  106 (108)
T ss_dssp             TCCSSSHHHHCSSSCSCCS-SCCCGGGTTTSHHHHSSSC-----CCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHH
T ss_pred             cccHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            3456789999999999999 999999999999999   6     67889999999999999999999999999654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.91  E-value=3.4e-10  Score=115.00  Aligned_cols=125  Identities=14%  Similarity=0.125  Sum_probs=91.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc--
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK--  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~--  372 (445)
                      .....+++++|+.+|.|++ |.|+.+||+.+|..+|...   .....++++++.+|+.+|.|+||.|+|+||+..+..  
T Consensus       342 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~  420 (494)
T 3lij_A          342 QEETKELTDIFRHIDKNGD-GQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK  420 (494)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHHhCcCCC-CeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence            4566789999999999999 9999999999999986100   001345789999999999999999999999976532  


Q ss_pred             --------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 --------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                              ...|...|.+.+|.++..|.......       ..+...++..  ....+|.+.||+|+.
T Consensus       421 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-------~~~~~~~~~~--~~~~~D~d~dG~I~~  479 (494)
T 3lij_A          421 SLLSKDKLESAFQKFDQDGNGKISVDELASVFGL-------DHLESKTWKE--MISGIDSNNDGDVDF  479 (494)
T ss_dssp             HHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-------CSCCCHHHHH--HHHTTCSSSSSSEEH
T ss_pred             ccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------cCCCHHHHHH--HHHHhCCCCCCcCCH
Confidence                    23456667788888877775433222       1222333333  556789999999874

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.91  E-value=3.1e-09  Score=90.31  Aligned_cols=66  Identities=20%  Similarity=0.407  Sum_probs=61.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        94 ~~~~~~~~F~~~D~d~~-G~I~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  159 (162)
T 1top_A           94 SEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME  159 (162)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            45678999999999999 9999999999999999     789999999999999999999999999997664

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.91  E-value=2.5e-09  Score=92.75  Aligned_cols=67  Identities=31%  Similarity=0.542  Sum_probs=59.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus        82 ~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  148 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  148 (179)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHC-------CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            44678999999999999 9999999999999999     7899999999999999999999999999976644

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.91  E-value=2e-09  Score=84.73  Aligned_cols=65  Identities=9%  Similarity=0.174  Sum_probs=54.7

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHH-----hccCCCCCCCCH-----------HHHHHHHHHhcCCCCceeeHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLAD-----------EETKDLWVQADIDGNGVVDYKE  365 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~-----------~~~~~~~~~~d~~~~g~i~~~e  365 (445)
                      ..++.+|+.||.|++ |+|+.+||+.++..     +|     ...+.           ..++.++..+|.|+||.|+|+|
T Consensus        20 ~~~~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~g-----~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~E   93 (103)
T 1snl_A           20 FNPKTFFILHDINSD-GVLDEQELEALFTKELEKVYD-----PKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEE   93 (103)
T ss_dssp             CCHHHHHHHHCSSCC-SEEEHHHHHHHHHHHHHTTSC-----CSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHH
T ss_pred             CCHHHHHHHHcCCCC-CcccHHHHHHHHHHHHHHHhc-----cCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHH
Confidence            468899999999999 99999999999996     46     33332           3488999999999999999999


Q ss_pred             HHHHHhc
Q 013328          366 FQQRIWK  372 (445)
Q Consensus       366 F~~~~~~  372 (445)
                      |+..+..
T Consensus        94 F~~~~~~  100 (103)
T 1snl_A           94 FLASTQR  100 (103)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            9976643

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.90  E-value=1.9e-09  Score=86.16  Aligned_cols=65  Identities=22%  Similarity=0.278  Sum_probs=58.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +....+.++|+.+|+ ++ |+|+.+|++.+|.+.|       ++.+++.+|+...|.|+||.|+|+||+.+|+.
T Consensus        30 ee~~~y~~iF~~lD~-~d-G~Isg~elr~~~~~sg-------Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L   94 (121)
T 3fia_A           30 EERAKHDQQFHSLKP-IS-GFITGDQARNFFFQSG-------LPQPVLAQIWALADMNNDGRMDQVEFSIAMKL   94 (121)
T ss_dssp             HHHHHHHHHHHHTCC-BT-TBEEHHHHHHHHGGGC-------CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CC-CeECHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            445668899999998 88 9999999999999988       77999999999999999999999999977744

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.90  E-value=2e-10  Score=98.17  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=85.6

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHH----HHhccCCCCCCCCHHHHHHH-----------HHHhcCCCCceeeHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEAL----EQLNLTGHKHGLADEETKDL-----------WVQADIDGNGVVDYKE  365 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l----~~~g~~~~~~~~~~~~~~~~-----------~~~~d~~~~g~i~~~e  365 (445)
                      ...++++|+.+|.|++ |.|+.+||+.+|    +.+|     ..++.++++.+           +..+|.|++|.|+|+|
T Consensus         3 ~~~l~~~F~~~D~d~d-G~i~~~E~~~~l~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~e   76 (166)
T 3akb_A            3 ERRIAARFTTFDQDGN-GHIDRSDFSGAAKAMLAEFG-----VAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREE   76 (166)
T ss_dssp             HHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHHHT-----CCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHH
T ss_pred             HHHHHHHHhHHcCCCC-CCcCHHHHHHHHHHHHHHcC-----CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            3568899999999999 999999999975    4568     67888887755           6999999999999999


Q ss_pred             HHHHHhc-----------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCc
Q 013328          366 FQQRIWK-----------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  428 (445)
Q Consensus       366 F~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (445)
                      |+..+..                 ...+...|.+.+|.+...|.......+|  ++     ..++..  ....+|.+.+|
T Consensus        77 f~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~-----~~~~~~--~~~~~D~d~dg  147 (166)
T 3akb_A           77 FVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VP-----EDLARQ--AAAALDTDGDG  147 (166)
T ss_dssp             HHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CC-----HHHHHH--HHHHHCTTCSS
T ss_pred             HHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CC-----HHHHHH--HHHHhCCCCCC
Confidence            9865532                 1234556777788888777665555555  22     122222  33467888899


Q ss_pred             ceeE
Q 013328          429 RLTV  432 (445)
Q Consensus       429 ~~~~  432 (445)
                      .|+.
T Consensus       148 ~i~~  151 (166)
T 3akb_A          148 KVGE  151 (166)
T ss_dssp             BCCH
T ss_pred             cCcH
Confidence            8764

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.89  E-value=6.2e-10  Score=98.63  Aligned_cols=103  Identities=16%  Similarity=0.094  Sum_probs=82.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cC
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  374 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~  374 (445)
                      ....++++ |..+|.|++ |.|+.+||+.+|+.+|+.+....++.++++.+++.+|.|++|.|+|+||+..+..    ..
T Consensus        30 ~~~~~l~~-F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~  107 (198)
T 1juo_A           30 QTQDPLYG-YFAAVAGQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQ  107 (198)
T ss_dssp             CCCCTTHH-HHHHHHTTT-TEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHH-HHHHhCCCC-CcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHH
Confidence            45677888 999999999 9999999999999998321112578999999999999999999999999965532    34


Q ss_pred             ccccccccCCcccccccccccccccCeee
Q 013328          375 WSDQRNDLNDEDEDGFVKSSLEQTIGFSV  403 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  403 (445)
                      .+...|.+..|.++..|.......+|..+
T Consensus       108 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~  136 (198)
T 1juo_A          108 HFISFDTDRSGTVDPQELQKALTTMGFRL  136 (198)
T ss_dssp             HHHTTCTTCCSEECHHHHHHHHHHTTCCC
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHhCCCC
Confidence            46777888888888888766666666543

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.88  E-value=8.6e-10  Score=94.77  Aligned_cols=98  Identities=16%  Similarity=0.113  Sum_probs=77.6

Q ss_pred             HhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccccccc
Q 013328          306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRND  381 (445)
Q Consensus       306 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~~~~~  381 (445)
                      ++|..+|.|++ |.|+.+||+.+|+.+|+.+....++.++++.++..+|.|++|.|+|+||+..+..    ...+...|.
T Consensus         5 ~~F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~   83 (167)
T 1gjy_A            5 YGYFASVAGQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDS   83 (167)
T ss_dssp             HHHHHHHCCTT-SCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCC-CcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46999999999 9999999999999998321112678999999999999999999999999975532    344567788


Q ss_pred             cCCcccccccccccccccCeeee
Q 013328          382 LNDEDEDGFVKSSLEQTIGFSVK  404 (445)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~g~~~~  404 (445)
                      +..|.++..|.......+|..++
T Consensus        84 d~~G~i~~~el~~~l~~~g~~~~  106 (167)
T 1gjy_A           84 DRSGTVDPQELQKALTTMGFRLN  106 (167)
T ss_dssp             TCCSEECHHHHHHHHHTTTCCCC
T ss_pred             CCCCcCCHHHHHHHHHHcCCCCC
Confidence            88888888877666666665433

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.87  E-value=6.2e-10  Score=95.41  Aligned_cols=98  Identities=11%  Similarity=0.088  Sum_probs=77.8

Q ss_pred             HhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccccccc
Q 013328          306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRND  381 (445)
Q Consensus       306 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~~~~~  381 (445)
                      .+|..+|.|++ |.|+.+||+.+|+.+|+.+....++.++++.+++.+|.|++|.|+|+||+..+..    ...+...|.
T Consensus         3 ~~F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~   81 (165)
T 1k94_A            3 YTYFSAVAGQD-GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQ   81 (165)
T ss_dssp             HHHHHHHHGGG-TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHhCCCC-CcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46999999999 9999999999999999321112678999999999999999999999999965532    345667788


Q ss_pred             cCCcccccccccccccccCeeee
Q 013328          382 LNDEDEDGFVKSSLEQTIGFSVK  404 (445)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~g~~~~  404 (445)
                      +..|.++..|.......+|..++
T Consensus        82 d~~G~i~~~el~~~l~~~g~~~~  104 (165)
T 1k94_A           82 DGSGTVEHHELRQAIGLMGYRLS  104 (165)
T ss_dssp             TCCSBCCHHHHHHHHHHTTCCCC
T ss_pred             CCCceECHHHHHHHHHHhCCCCC
Confidence            88888888877666666665433

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.87  E-value=2.6e-09  Score=93.98  Aligned_cols=61  Identities=16%  Similarity=0.243  Sum_probs=53.8

Q ss_pred             HhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       306 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||++.+..
T Consensus       117 ~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  177 (195)
T 1qv0_A          117 AVFDIFDKDGS-GTITLDEWKAYGKISG-----ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  177 (195)
T ss_dssp             HHHHHTC-----CEECHHHHHHHHHHHS-----SCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHhcCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            89999999999 9999999999999999     7799999999999999999999999999977644

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.87  E-value=2.2e-09  Score=89.14  Aligned_cols=63  Identities=24%  Similarity=0.371  Sum_probs=59.5

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|. ++|.|+|+||++.+.
T Consensus        76 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           76 EEFVKGFQVFDKDAT-GMIGVGELRYVLTSLG-----EKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHHHHHTTCSSCS-SCCCHHHHHHHHHHHH-----SCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcEeHHHHHHHHHHcC-----CCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence            678999999999999 9999999999999999     77999999999999999 999999999997664

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.86  E-value=3.1e-09  Score=93.05  Aligned_cols=61  Identities=18%  Similarity=0.266  Sum_probs=57.7

Q ss_pred             HhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       306 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus       113 ~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~  173 (191)
T 1uhk_A          113 ALFDIVDKDQN-GAITLDEWKAYTKAAG-----IIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  173 (191)
T ss_dssp             HHHHHHCTTCS-SEECHHHHHHHHHHHT-----SCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHhcCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            89999999999 9999999999999999     7799999999999999999999999999976653

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.86  E-value=2.1e-09  Score=94.59  Aligned_cols=79  Identities=10%  Similarity=0.092  Sum_probs=67.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..    ...+.
T Consensus        93 ~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~  166 (191)
T 1y1x_A           93 LSMREGFRKRDSSGD-GRLDSNEVRAALLSSG-----YQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFA  166 (191)
T ss_dssp             HHHHHHHHHHCTTSS-SCBCHHHHHHHHHTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999 9999999999999999     7899999999999999999999999999977643    23344


Q ss_pred             cccccCCcc
Q 013328          378 QRNDLNDED  386 (445)
Q Consensus       378 ~~~~~~~~~  386 (445)
                      ..|.+..|.
T Consensus       167 ~~D~d~dG~  175 (191)
T 1y1x_A          167 FYDRERTGQ  175 (191)
T ss_dssp             HHCTTCCSE
T ss_pred             HhCcCCCce
Confidence            555555554

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.86  E-value=2.7e-09  Score=92.01  Aligned_cols=81  Identities=20%  Similarity=0.177  Sum_probs=68.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..    ...+.
T Consensus        74 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~  147 (172)
T 2znd_A           74 TDWQNVFRTYDRDNS-GMIDKNELKQALSGFG-----YRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFR  147 (172)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CccCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999 9999999999999999     7799999999999999999999999999976643    23445


Q ss_pred             cccccCCcccc
Q 013328          378 QRNDLNDEDED  388 (445)
Q Consensus       378 ~~~~~~~~~~~  388 (445)
                      ..|.+..|.+.
T Consensus       148 ~~D~d~dG~i~  158 (172)
T 2znd_A          148 RYDTDQDGWIQ  158 (172)
T ss_dssp             HHCTTSSSCCC
T ss_pred             HhCCCCCCeEe
Confidence            55666666553

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.85  E-value=2.8e-09  Score=90.55  Aligned_cols=66  Identities=20%  Similarity=0.407  Sum_probs=59.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+.
T Consensus        93 ~~~~~~~~F~~~D~d~~-G~i~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  158 (161)
T 1dtl_A           93 SEEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  158 (161)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEEEHHHHGGGGTTC-------CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            34668999999999999 9999999999999988     779999999999999999999999999997664

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.85  E-value=4.6e-09  Score=88.57  Aligned_cols=68  Identities=24%  Similarity=0.392  Sum_probs=61.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHH----hcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQ----ADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~----~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|.. +|     ..+++++++.++..    +|.|++|.|+|+||+..+..
T Consensus        72 ~~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  144 (155)
T 3ll8_B           72 DKEQKLRFAFRIYDMDKD-GYISNGELFQVLKMMVG-----NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  144 (155)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred             CHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            344678999999999999 99999999999999 58     77999999999998    99999999999999976654

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.84  E-value=6.3e-09  Score=93.84  Aligned_cols=64  Identities=13%  Similarity=0.010  Sum_probs=57.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.+++.+| |+||.|+|+||++.+..
T Consensus       117 ~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~  180 (220)
T 3sjs_A          117 ELAYNLFVMNARARS-GTLEPHEILPALQQLG-----FYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAF  180 (220)
T ss_dssp             HHHHHHHHHHCCSST-TEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence            568999999999999 9999999999999999     7899999999999999 99999999999977743

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.84  E-value=1.5e-09  Score=96.17  Aligned_cols=68  Identities=21%  Similarity=0.334  Sum_probs=59.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh--ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~--g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+..+|+.+|.|++ |+|+.+||+.+|..+  |     ..+++++++.++..+|.|+||.|+|+||++.|..
T Consensus       126 ~~~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~~~~-----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          126 LKKEVCLIPFKFFDIDGN-GKISVEELKRIFGRDDIE-----NPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             CSHHHHHHHHHHHCTTCS-SEECHHHHHHHHC----C-----CHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            344688999999999999 999999999999988  5     5678899999999999999999999999976643

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.84  E-value=7.7e-10  Score=96.31  Aligned_cols=123  Identities=16%  Similarity=0.134  Sum_probs=86.1

Q ss_pred             ccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHH-----------HHHhcCCCCceeeHHHHH
Q 013328          300 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-----------WVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       300 ~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~-----------~~~~d~~~~g~i~~~eF~  367 (445)
                      ....++.+|+.+ |.|++ |.|+.+||..+|..++-. ....++.++++.+           ++.+|.|++|.|+|+||+
T Consensus         6 ~~~~l~~~F~~~~D~d~d-G~i~~~E~~~~l~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~   83 (185)
T 2sas_A            6 QKQKIKFTFDFFLDMNHD-GSIQDNDFEDMMTRYKEV-NKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL   83 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHHheeCCCC-CeEcHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence            346789999999 99999 999999999999887600 0023777777755           999999999999999999


Q ss_pred             HHHhcc-------------------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCc
Q 013328          368 QRIWKT-------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  428 (445)
Q Consensus       368 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (445)
                      ..+...                   ..+...|.+.+|.++..|.......+|+  +     ..++..  ....+|.+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~--~-----~~~~~~--~~~~~D~d~dG  154 (185)
T 2sas_A           84 AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL--Q-----CADVPA--VYNVITDGGKV  154 (185)
T ss_dssp             HHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC--C-----CSSHHH--HHHHHHTTTTS
T ss_pred             HHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC--C-----HHHHHH--HHHHhcCCCCC
Confidence            766321                   1234456677777777776555555552  1     222222  33467888899


Q ss_pred             ceeEE
Q 013328          429 RLTVV  433 (445)
Q Consensus       429 ~~~~~  433 (445)
                      .|+..
T Consensus       155 ~i~~~  159 (185)
T 2sas_A          155 TFDLN  159 (185)
T ss_dssp             CCSHH
T ss_pred             cCcHH
Confidence            88754

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.84  E-value=5.1e-09  Score=90.21  Aligned_cols=64  Identities=14%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.|++ |+|+.+||+.+|..+|       +++++++.++..+|.|+||.|+|+||+..+..
T Consensus        93 ~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           93 EGPLPLFFRAVDTNED-NNISRDEYGIFFGMLG-------LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHCTTSS-SSBCHHHHHHHHHHHT-------CCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcccHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence            4678999999999999 9999999999999988       67889999999999999999999999976643

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.83  E-value=1.3e-09  Score=93.44  Aligned_cols=118  Identities=12%  Similarity=0.110  Sum_probs=91.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      ......++.+|..+|.|++ |.|+.+||+.+|..+|     . .++.+++..++...    +|.|+|+||+..+..    
T Consensus        21 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~   90 (166)
T 2mys_B           21 ETEIEDFKEAFTVIDQNAD-GIIDKDDLRETFAAMG-----RLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG   90 (166)
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc
Confidence            4556789999999999999 9999999999999999     7 78999999999874    799999999976643    


Q ss_pred             -------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             ...+...|.+.+|.+...|.......+|..++..     ++..  ....+|.+.+|.|+.
T Consensus        91 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~D~d~dg~I~~  150 (166)
T 2mys_B           91 ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPE-----EIKN--MWAAFPPDVAGNVDY  150 (166)
T ss_pred             CCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHH-----HHHH--HHHhcCCCCCCeEeH
Confidence                   1234566778888888888766666666543332     2333  445788999998864

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.83  E-value=6.3e-09  Score=91.59  Aligned_cols=68  Identities=22%  Similarity=0.310  Sum_probs=57.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCH---HHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD---EETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~---~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |+|+.+||+.+|...+..   ..+++   ++++.++..+|.|+||.|+|+||++.|
T Consensus       119 ~~~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~~~~---~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~  189 (191)
T 3k21_A          119 LSKKLIYCAFRVFDVDND-GEITTAELAHILYNGNKK---GNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM  189 (191)
T ss_dssp             CCHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHSSSC---SCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHhcCCC---CCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHH
Confidence            445678899999999999 999999999999984311   55666   468999999999999999999999654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.82  E-value=7.7e-10  Score=112.09  Aligned_cols=120  Identities=11%  Similarity=0.108  Sum_probs=86.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHH----HHhccCCCCCCCC-------HHHHHHHHHHhcCCCCceeeHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEAL----EQLNLTGHKHGLA-------DEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l----~~~g~~~~~~~~~-------~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      ......++++|+.+|.|++ |.|+.+||..++    +.+|     ..++       +++++.++..+|.|+||.|+|+||
T Consensus       331 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef  404 (484)
T 3nyv_A          331 QDETKELTAIFHKMDKNGD-GQLDRAELIEGYKELMRMKG-----QDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEF  404 (484)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHC---------CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCC-ceEeHHHHHHHHHHHhhhcc-----cccccccccccHHHHHHHHHHhCCCCCCeEeHHHH
Confidence            4566789999999999999 999999995554    4456     5566       789999999999999999999999


Q ss_pred             HHHHhc----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          367 QQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       367 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      +..+..          ...+...|.+.+|.++.+|........+       +...++..  ....+|.+.||.|+.
T Consensus       405 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-------~~~~~~~~--~~~~~D~d~dG~i~~  471 (484)
T 3nyv_A          405 VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-------VDSETWKS--VLSEVDKNNDGEVDF  471 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTT-------CCHHHHHH--HHHHHCTTCCSEEEH
T ss_pred             HHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcC-------CCHHHHHH--HHHHhcCCCCCcCCH
Confidence            976533          2345677888888888877544332211       11222222  445788999999874

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.82  E-value=4e-09  Score=94.09  Aligned_cols=67  Identities=25%  Similarity=0.380  Sum_probs=60.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHH----HHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDL----WVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~----~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+ |     ..+++++++.+    +..+|.|+||.|+|+||+..+..
T Consensus       111 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~  182 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKD-DKISRDELLQVLRMMVG-----VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK  182 (208)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHSC-----TTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHCCCCC-CEEcHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            45678999999999999 999999999999997 8     77999999888    99999999999999999965543

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.82  E-value=9.3e-09  Score=87.66  Aligned_cols=62  Identities=19%  Similarity=0.236  Sum_probs=57.5

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.++..+|.|+||.|+|+||+..+.
T Consensus        98 ~~~~~~F~~~D~d~~-G~i~~~E~~~~l~~~~-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  159 (166)
T 3akb_A           98 PFLHAALGVADTDGD-GAVTVADTARALTAFG-------VPEDLARQAAAALDTDGDGKVGETEIVPAFA  159 (166)
T ss_dssp             HHHHHHHHHHCSSSS-SCCBHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            458899999999999 9999999999999987       7899999999999999999999999997663

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.81  E-value=4.4e-09  Score=91.69  Aligned_cols=71  Identities=24%  Similarity=0.412  Sum_probs=58.6

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.||.|++ |+|+.+||+.+|..+|.......+++++++.    ++..+|.|+||.|+|+||+..+..
T Consensus        97 ~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  171 (183)
T 1dgu_A           97 DIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  171 (183)
T ss_dssp             HHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            3579999999999999 9999999999999998100001467788875    999999999999999999976644

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.81  E-value=4.6e-09  Score=93.16  Aligned_cols=67  Identities=24%  Similarity=0.360  Sum_probs=60.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHH----hcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQ----ADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~----~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+|..+ |     ..+++++++.++..    +|.|+||.|+|+||+..+..
T Consensus       112 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  183 (202)
T 2bec_A          112 RRNKLHYAFQLYDLDRD-GKISRHEMLQVLRLMVG-----VQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK  183 (202)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHSCC-----SCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            34578899999999999 999999999999999 8     77999999999998    99999999999999965543

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.80  E-value=5.6e-10  Score=98.84  Aligned_cols=116  Identities=14%  Similarity=0.219  Sum_probs=91.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      .....++++|..||.|++ |.|+..||+.+|..+|     ..++..++..++..+    +|.|+|+||+..+...     
T Consensus        54 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~lg-----~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~  123 (196)
T 3dtp_E           54 HQVQEFKEAFQLIDQDKD-GFISKNDIRATFDSLG-----RLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTD  123 (196)
T ss_dssp             TTHHHHHHHHHHHCCSCS-SBCCHHHHHHHHHTTS-----CCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCC
Confidence            455678999999999999 9999999999999999     779999999999887    8999999999766431     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                            ..|...|.+..|.+...+..... .+|..++...     +..  ....+|.+.+|.|+.
T Consensus       124 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~-----~~~--l~~~~D~d~dG~I~~  180 (196)
T 3dtp_E          124 EEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDE-----VDQ--ALSEAPIDGNGLIDI  180 (196)
T ss_dssp             CHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHH-----HHH--HHHSSCEETTEECHH
T ss_pred             cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHH-----HHH--HHHHcCCCCCCEEeH
Confidence                  23466788888988888877777 7775544332     222  345678888998764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.80  E-value=6.7e-10  Score=94.16  Aligned_cols=117  Identities=11%  Similarity=0.155  Sum_probs=88.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++.+++..++.    +++|.|+|+||+..+...    
T Consensus        14 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~   83 (156)
T 1wdc_B           14 QKQIQEMKEAFSMIDVDRD-GFVSKEDIKAISEQLG-----RAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT   83 (156)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSCCHHHHHHHHHHHS-----SCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence            3456779999999999999 9999999999999999     7799999999885    478999999999766431    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                             ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+ +|.|+.
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~~-dg~i~~  141 (156)
T 1wdc_B           84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDE-----MRM--TFKEAPVE-GGKFDY  141 (156)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHCCEE-TTEECH
T ss_pred             ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHH-----HHH--HHHhcCCC-CCEEeH
Confidence                   2345667788888888777666666665443322     222  33467778 888763

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.80  E-value=3.9e-09  Score=95.08  Aligned_cols=66  Identities=23%  Similarity=0.316  Sum_probs=60.3

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.||.|++ |+|+.+||+.+|..+|     . .+++++++.+|..+|.|+||.|+|+||+..+..
T Consensus       129 ~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~  195 (219)
T 3cs1_A          129 FFELTVMFDEIDASGN-MLVDEEEFKRAVPKLE-----AWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA  195 (219)
T ss_dssp             HHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHHH-----HHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhc-----ccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            4678999999999999 9999999999999998     5 678888999999999999999999999977754

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.79  E-value=4.4e-09  Score=94.46  Aligned_cols=85  Identities=21%  Similarity=0.384  Sum_probs=63.6

Q ss_pred             HHHHHHHHHhhh--hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHhcCCCCce
Q 013328          287 EAVFGMFKCLLR--RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGV  360 (445)
Q Consensus       287 ~~v~~~~~~~~~--~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~d~~~~g~  360 (445)
                      +.|+..+.....  .....++.+|+.||.|++ |+|+.+||+.+|..+|.......+++++++.    +|..+|.|+||.
T Consensus       112 ~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~  190 (214)
T 2l4h_A          112 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT  190 (214)
T ss_dssp             HHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSS
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCc
Confidence            344444443332  234579999999999999 9999999999999987100001567777764    999999999999


Q ss_pred             eeHHHHHHHHhc
Q 013328          361 VDYKEFQQRIWK  372 (445)
Q Consensus       361 i~~~eF~~~~~~  372 (445)
                      |+|+||++.+..
T Consensus       191 Is~~EF~~~~~~  202 (214)
T 2l4h_A          191 INLSEFQHVISR  202 (214)
T ss_dssp             BCSHHHHHHHHT
T ss_pred             CCHHHHHHHHHh
Confidence            999999976654

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.78  E-value=2.7e-09  Score=89.38  Aligned_cols=67  Identities=15%  Similarity=0.296  Sum_probs=51.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccC---CCCCCCCHHHHHHHH----HHhcCCCCceeeHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLT---GHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~---~~~~~~~~~~~~~~~----~~~d~~~~g~i~~~eF~~~  369 (445)
                      ..+..+|+.||.|++ |+|+.+||+.+|..++-.   .....+++++++.++    +.+|.|+||.|+|+||+..
T Consensus        68 ~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~  141 (143)
T 3a4u_B           68 ELQLHYFKMHDYDGN-NLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKS  141 (143)
T ss_dssp             HHHHHHHHHTCTTCS-SCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC-
T ss_pred             HHHHHHHHHhCCCCC-CccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            567889999999999 999999999999887300   000457888886666    9999999999999999854

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.78  E-value=1.2e-08  Score=89.44  Aligned_cols=64  Identities=9%  Similarity=0.100  Sum_probs=58.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.+++.+|.|+||.|+|+||+..+..
T Consensus       108 ~~~~~~~F~~~D~d~d-G~I~~~E~~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  171 (191)
T 2ccm_A          108 TKYMNFMFDVNDTSGD-NIIDKHEYSTVYMSYG-------IPKSDCDAAFDTLSDGGKTMVTREIFARLWTE  171 (191)
T ss_dssp             HHHHHHHHHHHCTTCS-SBCCHHHHHHHHHTTT-------CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            3568899999999999 9999999999999887       78999999999999999999999999976643

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.78  E-value=1.8e-08  Score=86.80  Aligned_cols=63  Identities=19%  Similarity=0.311  Sum_probs=58.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.+++.+|.|++|.|+|+||++.+..
T Consensus       102 ~~~~~~F~~~D~d~~-G~I~~~e~~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~  164 (176)
T 1nya_A          102 PVVKGIVGMCDKNAD-GQINADEFAAWLTALG-------MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHHHHHHTCSSCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHHHHHhcCCCC-CCCCHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            558899999999999 9999999999999987       78999999999999999999999999976543

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.78  E-value=2.9e-10  Score=105.17  Aligned_cols=127  Identities=9%  Similarity=0.069  Sum_probs=90.0

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD------EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~------~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++.      .+++.++..+|.|++|.|+|+||+..+.
T Consensus        12 ~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~l~-----~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~   85 (263)
T 2f33_A           12 LITASQFFEIWLHFDADGS-GYLEGKELQNLIQELL-----QARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLP   85 (263)
T ss_dssp             CCCHHHHHHHHHHHCTTCS-SSBCSHHHHHHHHHHH-----HHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTT
T ss_pred             cccHHHHHHHHHHhCCCCC-CCcCHHHHHHHHHHHH-----hhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            3455679999999999999 9999999999999987     33443      7889999999999999999999997653


Q ss_pred             cc-------------------CccccccccCCccccccccccccccc----CeeeeccccCCcccccCCCCCCCCCCCCc
Q 013328          372 KT-------------------TWSDQRNDLNDEDEDGFVKSSLEQTI----GFSVKNAVLFPPEVEKGRWPENYSLSDHA  428 (445)
Q Consensus       372 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (445)
                      ..                   ..+...|.+..|.+...|.......+    |..++...+ ...+..  ....+|.+.+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~-~~~~~~--~~~~~d~~~dg  162 (263)
T 2f33_A           86 TEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKL-AEYTDL--MLKLFDSNNDG  162 (263)
T ss_dssp             SCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHH-HHHHHH--HHHHTCSSSSS
T ss_pred             hhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHH-HHHHHH--HHHhcCCCCCC
Confidence            22                   34456677777877777765555444    554443321 000000  22357778888


Q ss_pred             ceeEE
Q 013328          429 RLTVV  433 (445)
Q Consensus       429 ~~~~~  433 (445)
                      .|+..
T Consensus       163 ~i~~~  167 (263)
T 2f33_A          163 KLELT  167 (263)
T ss_dssp             CBCHH
T ss_pred             eEcHH
Confidence            87653

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.78  E-value=2.9e-09  Score=88.32  Aligned_cols=113  Identities=10%  Similarity=0.043  Sum_probs=83.6

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC------
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT------  374 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~------  374 (445)
                      ...++++|+.+|.|++ |.|+.+||+.+|+.+|     ..++.+++..++.    +++|.|+|+||+..+....      
T Consensus         4 ~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~   73 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGT-GRIPKTSIGDLLRACG-----QNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPG   73 (140)
T ss_dssp             CTTTHHHHHHTCSSSS-SEECHHHHHHHHHHTS-----CCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSC
T ss_pred             HHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcc
Confidence            4678899999999999 9999999999999999     7789999999887    8899999999997663321      


Q ss_pred             -------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          375 -------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       375 -------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                             .+...|.+..|.+...|.......+|..++...     +..  ....+|. .+|.|+
T Consensus        74 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~-~dg~i~  129 (140)
T 1ggw_A           74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE-----MDE--LLKGVPV-KDGMVN  129 (140)
T ss_dssp             CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHH-----HHH--HHHHTTC-SSCCST
T ss_pred             cHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHH-----HHH--HHHhccC-CCCcEe
Confidence                   234557777777777776655555554433222     222  3345666 777765

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.77  E-value=4.5e-09  Score=90.81  Aligned_cols=81  Identities=12%  Similarity=0.069  Sum_probs=68.1

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||+..+..    ...+.
T Consensus        77 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~  149 (173)
T 1alv_A           77 KKWQAIYKQFDVDRS-GTIGSSELPGAFEAAG-----FHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFK  149 (173)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCTTTHHHHHHHHT-----CCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999 9999999999999999     7899999999999999 99999999999976643    23345


Q ss_pred             cccccCCccccc
Q 013328          378 QRNDLNDEDEDG  389 (445)
Q Consensus       378 ~~~~~~~~~~~~  389 (445)
                      ..|.+..|.+..
T Consensus       150 ~~D~d~~G~i~~  161 (173)
T 1alv_A          150 SLDKDGTGQIQV  161 (173)
T ss_dssp             HHSSSCCSEEEE
T ss_pred             HhCCCCCCeecH
Confidence            556666665543

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.77  E-value=6.8e-10  Score=98.60  Aligned_cols=119  Identities=13%  Similarity=0.101  Sum_probs=86.8

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---  374 (445)
                      ......+.++|..+|.|++ |.|+.+||+.+ ..+|     ..++   ++.++..+|.|++|.|+|+||+..+....   
T Consensus        25 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~-~~lg-----~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~   94 (202)
T 2bec_A           25 QASLLRLHHRFRALDRNKK-GYLSRMDLQQI-GALA-----VNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVE   94 (202)
T ss_dssp             HHHHHHHHHHHHHHCSSCS-SCCCHHHHHTC-HHHH-----HSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCcCHHHHHHH-HhcC-----CCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccc
Confidence            3456778999999999999 99999999999 8888     4343   89999999999999999999997664322   


Q ss_pred             ------------------------ccccccccCCccccccccccccccc-CeeeeccccCCcccccCCCCCC----CCCC
Q 013328          375 ------------------------WSDQRNDLNDEDEDGFVKSSLEQTI-GFSVKNAVLFPPEVEKGRWPEN----YSLS  425 (445)
Q Consensus       375 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~  425 (445)
                                              .+...|.+.+|.++..|.......+ |..++...     +..  ....    +|.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~-----~~~--~~~~~~~~~D~d  167 (202)
T 2bec_A           95 DEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQ-----LEN--IADRTVQEADED  167 (202)
T ss_dssp             HHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHH-----HHH--HHHHHHHHHCSS
T ss_pred             hhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHH-----HHH--HHHHHHHHcCCC
Confidence                                    2344566777777777765555555 54433222     221  2334    7889


Q ss_pred             CCcceeEE
Q 013328          426 DHARLTVV  433 (445)
Q Consensus       426 ~~~~~~~~  433 (445)
                      .+|.|+..
T Consensus       168 ~dG~Is~~  175 (202)
T 2bec_A          168 GDGAVSFV  175 (202)
T ss_dssp             CSSSEEHH
T ss_pred             CCCcCcHH
Confidence            99988753

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.75  E-value=1.5e-09  Score=94.64  Aligned_cols=126  Identities=11%  Similarity=0.020  Sum_probs=86.8

Q ss_pred             ccchHHHhcccccc-CCCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          300 ASLTETDAFAFLKA-DNDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~-~~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ...++.++|+.||. |++ |.|+.+||+.+|..+|     .. .+..+++.+++.+|.|++|.|+|+||+..+..     
T Consensus        16 s~~~i~~l~~~fd~~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~   89 (183)
T 1s6c_A           16 TKRELQVLYRGFKNEXPS-GVVNEETFKQIYAQFF-----PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT   89 (183)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEECHHHHHHHHHHHS-----TTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHhCCC-CcCCHHHHHHHHHHHc-----CCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCC
Confidence            34567778888887 899 9999999999999998     43 78899999999999999999999999976632     


Q ss_pred             -----cCccccccccCCccccccccccccccc----Ceeeeccc---cCCcccccCCCCCCCCCCCCcceeEE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTI----GFSVKNAV---LFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                           ..++...|.+.+|.++..|.......+    |....+..   ....++..  ....+|.+.+|.|+..
T Consensus        90 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~  160 (183)
T 1s6c_A           90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDV--FFQKMDKNKDGIVTLD  160 (183)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHH--HHHHHCTTCSSEECHH
T ss_pred             HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHH--HHHHhCCCCCCcEeHH
Confidence                 234456677778888777765444433    43211100   00112222  3346788889987643

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.75  E-value=8.5e-09  Score=89.74  Aligned_cols=64  Identities=17%  Similarity=0.344  Sum_probs=55.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCC--------ceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN--------GVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~--------g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.|++ |+|+.+||+.+|.  +     ..+++++++.++..+|.|+|        |.|+|+||+..|..
T Consensus       107 ~~~~~~~F~~~D~d~~-G~I~~~El~~~l~--~-----~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          107 STFLKAAFNKIDKDED-GYISKSDIVSLVH--D-----KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             -CHHHHHHHHHCTTCS-SCBCHHHHHHHTT--T-----SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCC-CCCCHHHHHHHHc--C-----CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            3689999999999999 9999999999998  4     55899999999999999988        99999999977653

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.75  E-value=1e-08  Score=89.71  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=59.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|.  |     ..+++++++.++..+|.|++|.|+|+||++.+.
T Consensus       120 ~~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~--~-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  184 (191)
T 3khe_A          120 LSRERLLAAFQQFDSDGS-GKITNEELGRLFG--V-----TEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ  184 (191)
T ss_dssp             CCHHHHHHHHHHHCTTCS-SEECHHHHHHHTT--S-----SCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             chHHHHHHHHHHHCCCCc-CcCCHHHHHHHHc--c-----CCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            344678999999999999 9999999999998  6     679999999999999999999999999997663

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.74  E-value=1.8e-10  Score=104.60  Aligned_cols=121  Identities=11%  Similarity=0.059  Sum_probs=90.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHH-HHHHhccCCCCCCCCHHHHHHHHHHh---------cCCCCceeeHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCE-ALEQLNLTGHKHGLADEETKDLWVQA---------DIDGNGVVDYKEFQ  367 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~-~l~~~g~~~~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~eF~  367 (445)
                      ......++++|..+|.|++ |.|+.+||+. +++.+|     ..++.++++.++..+         |.|++|.|+|+||+
T Consensus        47 ~~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~lg-----~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~  120 (226)
T 2lvv_A           47 AESKSRRIELFKQFDTNGT-GKLGFREVLDGCYGILK-----LDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFL  120 (226)
T ss_dssp             HHHHHHHHHHHHHHGGGSC-SCBCSHHHHHHHHHTTC-----CTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHH
Confidence            3556789999999999999 9999999998 556667     556666777777777         99999999999999


Q ss_pred             HHH--hc--------cCccccccccCCccccccccccccccc---CeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          368 QRI--WK--------TTWSDQRNDLNDEDEDGFVKSSLEQTI---GFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       368 ~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                      ..+  ..        ...|...|.+.+|.+...|.......+   |.....       +..  ....+|.+.+|.|+..
T Consensus       121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e-------~~~--~~~~~D~d~dG~Is~~  190 (226)
T 2lvv_A          121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITD-------ATT--VFNEIDTNGSGVVTFD  190 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCS-------CHH--HHHHHCCSCSSCEEHH
T ss_pred             HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHH-------HHH--HHHHhCCCCCCcEeHH
Confidence            742  11        234567788888988888876655554   544332       222  3456888999988743

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.74  E-value=2e-09  Score=99.40  Aligned_cols=125  Identities=14%  Similarity=0.138  Sum_probs=90.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHH----HHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.+|..+    |     ..+++++++.    ++..+|.|++|.|+|+||+..+
T Consensus       100 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~  173 (263)
T 2f33_A          100 KSCEEFMKTWRKYDTDHS-GFIETEELKNFLKDLLEKAN-----KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL  173 (263)
T ss_dssp             SCHHHHHHHHTTSSTTTC-SSBCHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHS
T ss_pred             cHHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence            345678999999999999 999999999999988    8     7788988887    9999999999999999999655


Q ss_pred             hc------------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCC-CCCCCCccee
Q 013328          371 WK------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN-YSLSDHARLT  431 (445)
Q Consensus       371 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  431 (445)
                      ..                  ...+...|.+.+|.+...|.......+|... ...+.+.++..  +... +|.+.+|.|+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~-~~~~~~~e~~~--~~~~~~D~d~dG~i~  250 (263)
T 2f33_A          174 PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKN-KQELDINNIST--YKKNIMALSDGGKLY  250 (263)
T ss_dssp             CTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHC-TTTCCTTTHHH--HHHHHHTTSBTTEEC
T ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhc-CCCCCHHHHHH--HHHHhhccCCCCeEc
Confidence            32                  1234556778888888777665555555411 01122333322  2223 4888899876


Q ss_pred             E
Q 013328          432 V  432 (445)
Q Consensus       432 ~  432 (445)
                      .
T Consensus       251 ~  251 (263)
T 2f33_A          251 R  251 (263)
T ss_dssp             G
T ss_pred             H
Confidence            4

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.73  E-value=1.3e-08  Score=92.38  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=58.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhcc-CC------CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TG------HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~------~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |+|+.+||..++..++- .|      .....++++++.+++.+|.|+||.|+|+||++.+.
T Consensus       135 ~~~~~l~~~F~~~D~d~d-G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  213 (229)
T 3dd4_A          135 TVQEKLNWAFNLYDINKD-GYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ  213 (229)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            344678999999999999 99999999999998720 00      00456778899999999999999999999997665


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       214 ~  214 (229)
T 3dd4_A          214 K  214 (229)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=98.73  E-value=9.8e-09  Score=91.49  Aligned_cols=61  Identities=16%  Similarity=0.323  Sum_probs=56.4

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.++..+|.|+||.|+|+||+..+..
T Consensus       130 ~~~~F~~~D~d~~-G~Is~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  190 (208)
T 2hpk_A          130 SNSYYDVLDDDGD-GTVDVDELKTMMKAFD-------VPQEAAYTFFEKADTDKSGKLERTELVHLFRK  190 (208)
T ss_dssp             HHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-------SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-------cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            7889999999999 9999999999999988       67789999999999999999999999976643

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.73  E-value=1.8e-08  Score=99.49  Aligned_cols=66  Identities=32%  Similarity=0.552  Sum_probs=61.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....++.+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..|.
T Consensus       383 ~~e~l~~aFk~fD~D~d-G~Is~eELr~~L~~lG-----~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             hhhHHHHHHHHhCCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            34578999999999999 9999999999999999     789999999999999999999999999997653

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.73  E-value=5.6e-09  Score=94.57  Aligned_cols=66  Identities=23%  Similarity=0.347  Sum_probs=57.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT  374 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~  374 (445)
                      ...+..+|+.||+|++ |+|+.+||+.+|..+   |       ++..+++.+|..+|.|+||.|+|+||+..|....
T Consensus       132 ~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~~~g-------~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  200 (226)
T 2lvv_A          132 IFELTVMFDTMDKDGS-LLLELQEFKEALPKLKEWG-------VDITDATTVFNEIDTNGSGVVTFDEFSCWAVTKK  200 (226)
T ss_dssp             HHHHHHHHHHHSCSSC-CEECHHHHHHHHHHHHHHT-------CCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CeEcHHHHHHHHHHHhhcC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcC
Confidence            3578999999999999 999999999999988   6       3334599999999999999999999998776533

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.72  E-value=1.4e-08  Score=86.80  Aligned_cols=79  Identities=13%  Similarity=0.201  Sum_probs=65.8

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+  |++|.|+|+||+..+..    ...+.
T Consensus        70 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~  141 (165)
T 1k94_A           70 NAWKENFMTVDQDGS-GTVEHHELRQAIGLMG-----YRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFR  141 (165)
T ss_dssp             HHHHHHHHHHCTTCC-SBCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-ceECHHHHHHHHHHhC-----CCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999 9999999999999999     779999999999999  89999999999977643    23344


Q ss_pred             cccccCCcccc
Q 013328          378 QRNDLNDEDED  388 (445)
Q Consensus       378 ~~~~~~~~~~~  388 (445)
                      ..|.+..|.+.
T Consensus       142 ~~D~d~~G~i~  152 (165)
T 1k94_A          142 KRDHLQQGSAN  152 (165)
T ss_dssp             TTCTTCCSEEE
T ss_pred             HhCCCCCCeEe
Confidence            55555555443

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.72  E-value=7.1e-09  Score=89.88  Aligned_cols=110  Identities=15%  Similarity=0.093  Sum_probs=80.1

Q ss_pred             ccCCCCCcccHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccccccccCCcc
Q 013328          312 KADNDGDYITYSGFCEALEQLNLTG-HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRNDLNDED  386 (445)
Q Consensus       312 D~~~~~G~i~~~el~~~l~~~g~~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~~~~~~~~~~  386 (445)
                      +.|++ |+|+.+||+.+|+.++..+ .+..++.++++.++..+|.|++|.|+|+||+..+..    ...|...| +.+|.
T Consensus        14 ~~~~d-G~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~   91 (174)
T 2i7a_A           14 LVPRG-SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGV   91 (174)
T ss_dssp             SCC-C-CCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTB
T ss_pred             cCCCC-CcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence            57899 9999999999999982100 005688999999999999999999999999965422    34677788 89999


Q ss_pred             ccccccccccccc----CeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          387 EDGFVKSSLEQTI----GFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       387 ~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                      ++..|.......+    |+.++...     +..  ....+| +.+|.|+
T Consensus        92 I~~~El~~~l~~l~~~~G~~~~~~~-----~~~--l~~~~d-d~dG~I~  132 (174)
T 2i7a_A           92 LLSSDLWKAIENTDFLRGIFISREL-----LHL--VTLRYS-DSVGRVS  132 (174)
T ss_dssp             EEGGGHHHHHHTCGGGTTCCCCHHH-----HHH--HHHHHS-CTTSEEC
T ss_pred             CCHHHHHHHHHHhHhccCCCCCHHH-----HHH--HHHHHc-CCCCeEc
Confidence            9998887777777    77654433     111  223455 5667655

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.71  E-value=5.1e-10  Score=94.56  Aligned_cols=117  Identities=18%  Similarity=0.167  Sum_probs=82.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc------
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT------  373 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~------  373 (445)
                      ....++++|+.+|.|++ |.|+.+|| ..|..++     ...   +++.++..+|.|++|.|+|+||+..+...      
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el-~~l~~~~-----~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~   73 (155)
T 3ll8_B            4 EIKRLGKRFKKLDLDNS-GSLSVEEF-MSLPELQ-----QNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK   73 (155)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHH-TTSGGGT-----TCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCH
T ss_pred             HHHHHHHHHHHhCcCCC-CeEcHHHH-HHhhccc-----cch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCH
Confidence            44678999999999999 99999999 6677766     322   78999999999999999999999766432      


Q ss_pred             -----CccccccccCCcccccccccccccc-cCeeeeccccCCcccccCCCCCC----CCCCCCcceeEE
Q 013328          374 -----TWSDQRNDLNDEDEDGFVKSSLEQT-IGFSVKNAVLFPPEVEKGRWPEN----YSLSDHARLTVV  433 (445)
Q Consensus       374 -----~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  433 (445)
                           ..+...|.+.+|.+...|....... .|..++...     +..  ....    +|.+.+|.|+..
T Consensus        74 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~-----~~~--~~~~~~~~~D~~~dg~i~~~  136 (155)
T 3ll8_B           74 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ-----LQQ--IVDKTIINADKDGDGRISFE  136 (155)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHH-----HHH--HHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHH-----HHH--HHHHHHHHhCCCCCCcCcHH
Confidence                 2234557777777777775554444 354333222     111  2234    788889988743

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.71  E-value=2.3e-08  Score=87.21  Aligned_cols=65  Identities=18%  Similarity=0.339  Sum_probs=58.1

Q ss_pred             chHHHhc--cccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAF--AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F--~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+|  +.||.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||++.+..
T Consensus       100 ~~~~~~f~~~~fD~d~~-G~I~~~E~~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~  166 (186)
T 2hps_A          100 AVIQSLIMYDCIDTDKD-GYVSLPEFKAFLQAVG-----PDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND  166 (186)
T ss_dssp             TTHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHC-----TTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4555666  77899999 9999999999999999     7799999999999999999999999999976643

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.70  E-value=1.4e-08  Score=87.12  Aligned_cols=79  Identities=11%  Similarity=0.138  Sum_probs=66.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+  |++|.|+|+||+..+..    ...+.
T Consensus        72 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~  143 (167)
T 1gjy_A           72 NGWRQHFISFDSDRS-GTVDPQELQKALTTMG-----FRLNPQTVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFR  143 (167)
T ss_dssp             HHHHHHHHHHCTTCC-SEECHHHHHHHHHTTT-----CCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999 9999999999999999     779999999999999  88999999999976633    23445


Q ss_pred             cccccCCcccc
Q 013328          378 QRNDLNDEDED  388 (445)
Q Consensus       378 ~~~~~~~~~~~  388 (445)
                      ..|.+..|.+.
T Consensus       144 ~~D~d~~G~i~  154 (167)
T 1gjy_A          144 RRDSAQQGMVN  154 (167)
T ss_dssp             HHCTTCCSEEE
T ss_pred             HhCCCCCeeEE
Confidence            55666665554

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.70  E-value=2.8e-09  Score=91.85  Aligned_cols=121  Identities=11%  Similarity=0.074  Sum_probs=84.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH-H--------HHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE-T--------KDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~-~--------~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....++++|+.+|.|++ |.|+.+||+.+|..+|-. ....++..+ +        +.+++.+|  ++|.|+|+||+..+
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~   79 (174)
T 1q80_A            4 WVQKMKTYFNRIDFDKD-GAITRMDFESMAERFAKE-SEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM   79 (174)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEESHHHHHHHHHHHHHH-SSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCC-CcEeHHHHHHHHHHHHHH-hCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence            34678999999999999 999999999999987600 002466666 6        46788888  89999999999766


Q ss_pred             hccC---------------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          371 WKTT---------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       371 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                      ....               .+...|.+..|.+...|.......+|+  +     +.++..  ....+|.+.+|.|+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~--~-----~~~~~~--~~~~~D~d~dg~i~~~  148 (174)
T 1q80_A           80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--D-----KTMAPA--SFDAIDTNNDGLLSLE  148 (174)
T ss_dssp             HHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTC--C-----GGGHHH--HHHHHCTTCSSSBCHH
T ss_pred             HHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCC--C-----HHHHHH--HHHHhCCCCCceEeHH
Confidence            4321               334557777788877776555555552  1     222222  3446788889988743

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.70  E-value=8.1e-09  Score=89.72  Aligned_cols=63  Identities=10%  Similarity=0.159  Sum_probs=57.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.++..+|.|+||.|+|+||+..+..
T Consensus       105 ~~~~~~F~~~D~d~d-G~Is~~E~~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~  167 (185)
T 2sas_A          105 NRIPFLFKGMDVSGD-GIVDLEEFQNYCKNFQ-------LQCADVPAVYNVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             HHHHHHHHHHCTTSS-SCCCHHHHHHHTTSSC-------CCCSSHHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CeEcHHHHHHHHHHhC-------CCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            678999999999999 9999999999998877       56778999999999999999999999976643

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.70  E-value=1.9e-08  Score=88.93  Aligned_cols=79  Identities=13%  Similarity=0.153  Sum_probs=66.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+  |+||.|+|+||+..+..    ...+.
T Consensus       103 ~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~  174 (198)
T 1juo_A          103 NGWRQHFISFDTDRS-GTVDPQELQKALTTMG-----FRLSPQAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFR  174 (198)
T ss_dssp             HHHHHHHHTTCTTCC-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999 9999999999999999     779999999999999  89999999999976633    23345


Q ss_pred             cccccCCcccc
Q 013328          378 QRNDLNDEDED  388 (445)
Q Consensus       378 ~~~~~~~~~~~  388 (445)
                      ..|.+..|.+.
T Consensus       175 ~~D~d~~G~is  185 (198)
T 1juo_A          175 RRDTAQQGVVN  185 (198)
T ss_dssp             HTCTTCCSEEE
T ss_pred             HhCCCCCCeEe
Confidence            55555555544

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.69  E-value=1.2e-08  Score=90.60  Aligned_cols=91  Identities=8%  Similarity=0.041  Sum_probs=73.9

Q ss_pred             ccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          300 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      ...+++++|+.||.+ ++ |.|+.+||+.+|..+|     ...+.++++.++..+|.|++|.|+|+||+..+...     
T Consensus        20 ~~~el~~~f~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~   93 (204)
T 1jba_A           20 DAAQLQEWYKKFLEECPS-GTLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL   93 (204)
T ss_dssp             HHHHHHHHHHHHHSSSTT-CCEEHHHHHHHHHCCS-----SSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC
T ss_pred             CHHHHHHHHHHHHhhCCC-CCcCHHHHHHHHHHhc-----CCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCH
Confidence            456789999999999 89 9999999999999999     67888999999999999999999999999766321     


Q ss_pred             -----CccccccccCCcccccccccccc
Q 013328          374 -----TWSDQRNDLNDEDEDGFVKSSLE  396 (445)
Q Consensus       374 -----~~~~~~~~~~~~~~~~~~~~~~~  396 (445)
                           ..+...|.+.+|.++..|.....
T Consensus        94 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l  121 (204)
T 1jba_A           94 EHKLKWTFKIYDKDRNGCIDRQELLDIV  121 (204)
T ss_dssp             THHHHHHHHHHCSSCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence                 13345566777777776654433

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.68  E-value=1.2e-09  Score=101.42  Aligned_cols=125  Identities=11%  Similarity=0.115  Sum_probs=88.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHH----HhccCCCCC--CCCHHHHHHHH----HHhcCCCCceeeHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKH--GLADEETKDLW----VQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~--~~~~~~~~~~~----~~~d~~~~g~i~~~eF~~~  369 (445)
                      ...+++++|+.+|.|++ |.|+.+||+.+|+    .+|     .  .+++++++.++    ..+|.|++|.|+|+||+..
T Consensus         9 ~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~~~lg-----~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~   82 (272)
T 2be4_A            9 DAAGFLQIWQHFDADDN-GYIEGKELDDFFRHMLKKLQ-----PKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANM   82 (272)
T ss_dssp             CHHHHHHHHHHHCTTCC-SEEEGGGHHHHHHHHHHHHS-----TTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence            45679999999999999 9999999999999    888     6  78898887754    7889999999999999977


Q ss_pred             Hhc---------------------cCccccccccCCccccccccccccccc----CeeeeccccCCcccccCCCCCCCCC
Q 013328          370 IWK---------------------TTWSDQRNDLNDEDEDGFVKSSLEQTI----GFSVKNAVLFPPEVEKGRWPENYSL  424 (445)
Q Consensus       370 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~  424 (445)
                      +..                     ...+...|.+..|.++..|.......+    |..++...+ ...+..  ....+|.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~-~~~~~~--~~~~~D~  159 (272)
T 2be4_A           83 ILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKL-DEYTDA--MMKIFDK  159 (272)
T ss_dssp             HSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHH-HHHHHH--HHHHHCS
T ss_pred             HhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHH-HHHHHH--HHHHhcc
Confidence            321                     123455677777888777765544444    544433221 000000  2234677


Q ss_pred             CCCcceeEE
Q 013328          425 SDHARLTVV  433 (445)
Q Consensus       425 ~~~~~~~~~  433 (445)
                      +.+|.|+..
T Consensus       160 ~~dg~i~~~  168 (272)
T 2be4_A          160 NKDGRLDLN  168 (272)
T ss_dssp             SCSSEEEHH
T ss_pred             CCCCcCcHH
Confidence            888887754

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.68  E-value=5.1e-09  Score=91.98  Aligned_cols=64  Identities=28%  Similarity=0.480  Sum_probs=58.0

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.|++ |+|+.+||+.+|..+|       +++++++.++..+|.|+||.|+|+||+..+..
T Consensus        81 ~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  144 (188)
T 1s6i_A           81 EENLVSAFSYFDKDGS-GYITLDEIQQACKDFG-------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK  144 (188)
T ss_dssp             CCSTHHHHHHTTTTCS-SEEEHHHHHHTTTTTT-------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            4678999999999999 9999999999999877       56788999999999999999999999976654

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.67  E-value=3.8e-08  Score=85.55  Aligned_cols=73  Identities=14%  Similarity=0.235  Sum_probs=57.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |+|+.+||+.++..+    |...   .......++++.+++.+|.|+||.|+|+||++.+.
T Consensus        89 ~~~~~~~~~f~~~D~d~~-G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~  167 (183)
T 1s6c_A           89 TVHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ  167 (183)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             CHHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            344678999999999999 999999999999887    5100   00112348899999999999999999999997654


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       168 ~  168 (183)
T 1s6c_A          168 E  168 (183)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.67  E-value=4.1e-09  Score=111.38  Aligned_cols=98  Identities=19%  Similarity=0.150  Sum_probs=84.0

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHh--------ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQL--------NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~--------g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+++++|+.+| |++ |.|+.+||+.+|..+        |     ..++.++++.|+..+|.|++|.|+|+||+..+..
T Consensus       531 ~~~l~~~F~~~D-d~d-G~Is~~El~~~L~~l~~~~~~~~g-----~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~  603 (714)
T 3bow_A          531 GDGFRRLFAQLA-GED-AEISAFELQTILRRVLAKREDIKS-----DGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK  603 (714)
T ss_dssp             CHHHHHHHHHHH-GGG-TSBCHHHHHHHHHHHHTTCTTSCC-----SCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCC-CcCCHHHHHHHHHHHhhhcccccC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            678999999999 999 999999999999997        6     6799999999999999999999999999965532


Q ss_pred             ----cCccccccccCCcccccccccccccccCeeeec
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  405 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  405 (445)
                          ...|...|.+.+|.++..|.......+|..++.
T Consensus       604 ~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~  640 (714)
T 3bow_A          604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC  640 (714)
T ss_dssp             HHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCH
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCH
Confidence                445677788999999988877777777766543

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.66  E-value=5.2e-09  Score=85.17  Aligned_cols=60  Identities=17%  Similarity=0.226  Sum_probs=52.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....+++++|+.||     |+|+.+||+.+|+.+|     .  ++++++.+++.+|.|+||.|+|+||+..+
T Consensus        47 ~~~~~l~~aF~~fD-----G~I~~~El~~~l~~lG-----~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~  106 (123)
T 2kld_A           47 NTVDDISESLRQGG-----GKLNFDELRQDLKGKG-----H--TDAEIEAIFTKYDQDGDQELTEHEHQQMR  106 (123)
T ss_dssp             ----CCSCSSTTTT-----TCEEHHHHHHHTTTCC-----S--SHHHHHHHHHHHSSSSCCEECSHHHHHCS
T ss_pred             hHHHHHHHHHHHhC-----CCCCHHHHHHHHHHhC-----C--CHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            33467888999998     8999999999999998     5  89999999999999999999999999654

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.66  E-value=9.5e-09  Score=87.79  Aligned_cols=65  Identities=28%  Similarity=0.439  Sum_probs=51.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.++..+|       +++++++.++..+|.|++|.|+|+||+..+..
T Consensus        97 ~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A           97 REDHLFAAFTYFDKDGS-GYITPDELQQACEEFG-------VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             TTHHHHHHHHHHCTTCS-SSBCHHHHHHHTCC---------------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            34678999999999999 9999999999999877       56888999999999999999999999976643

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.65  E-value=2.9e-09  Score=101.89  Aligned_cols=118  Identities=12%  Similarity=0.058  Sum_probs=93.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH-HHHHhcCCCCceeeHHHHHHHHhc----cC
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD-LWVQADIDGNGVVDYKEFQQRIWK----TT  374 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~-~~~~~d~~~~g~i~~~eF~~~~~~----~~  374 (445)
                      ....+..+|..+|.|++ |+|+.+||+.+|  +|     ..++.+++.. ++..+|.|++|.|+|+||+..+..    ..
T Consensus       186 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l--~g-----~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l~~  257 (323)
T 1ij5_A          186 DLAALVADFRKIDTNSN-GTLSRKEFREHF--VR-----LGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRI  257 (323)
T ss_dssp             HHHTSCCCHHHHCTTCC-SEECHHHHHHHH--HH-----TTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHH--cC-----CCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHHHH
Confidence            34567788999999999 999999999999  77     6788899999 999999999999999999976632    34


Q ss_pred             ccccccccCCcccccccccccc-cccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          375 WSDQRNDLNDEDEDGFVKSSLE-QTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      .+...|.+.+|.+...+..... ..+|..++...     +..  ....+|.+.+|.|+.
T Consensus       258 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e-----~~~--l~~~~D~d~dG~Is~  309 (323)
T 1ij5_A          258 LYAFADFDKSGQLSKEEVQKVLEDAHIPESARKK-----FEH--QFSVVDVDDSKSLSY  309 (323)
T ss_dssp             HHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCST-----HHH--HHHHHTTTTCSEECH
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHH-----HHH--HHHHHCCCCCCcEeH
Confidence            5677788888989888876666 66675443322     222  345678889998764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.65  E-value=6.4e-09  Score=92.58  Aligned_cols=127  Identities=13%  Similarity=0.054  Sum_probs=85.1

Q ss_pred             ccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          300 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      ...++.++|+.||.+ ++ |.|+.+||..+|..++.    ...+.++++.+++.+|.|++|.|+|+||+..+...     
T Consensus        31 ~~~~i~~~f~~~d~~~~~-G~i~~~ef~~~l~~~~~----~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~  105 (207)
T 2d8n_A           31 SEEELCSWYQSFLKDCPT-GRITQQQFQSIYAKFFP----DTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKT  105 (207)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHTCT----TSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSS
T ss_pred             CHHHHHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcc----CCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCH
Confidence            456788899999998 79 99999999999999871    23678889999999999999999999999766331     


Q ss_pred             -----CccccccccCCccccccccccccccc----C----eeeeccccCC-cccccCCCCCCCCCCCCcceeEE
Q 013328          374 -----TWSDQRNDLNDEDEDGFVKSSLEQTI----G----FSVKNAVLFP-PEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       374 -----~~~~~~~~~~~~~~~~~~~~~~~~~~----g----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                           .++...|.+..|.+...|.......+    |    ..++.....+ ..+..  ....+|.+.+|.|+..
T Consensus       106 ~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~--~f~~~D~d~dG~I~~~  177 (207)
T 2d8n_A          106 NQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEK--IWKYFGKNDDDKLTEK  177 (207)
T ss_dssp             STTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHH--HHHHTTCCTTCCEEHH
T ss_pred             HHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHH--HHHHcCCCCCCcCcHH
Confidence                 12344455666666666544333332    3    2222110000 11222  3356888999988753

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.65  E-value=6e-08  Score=87.68  Aligned_cols=67  Identities=15%  Similarity=0.238  Sum_probs=57.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHH----HhccCCCCCCCCHHHHHHHH----HHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~~~~~~~~~----~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |+|+.+||+.++.    .+|     ..+++++++.++    +.+|.|+||.|+|+||+..+.
T Consensus       120 ~~~~l~~~F~~~D~d~~-G~Is~~E~~~~l~~~~~~~g-----~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~  193 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQ-GFIERQEVKQMVVATLAESG-----MNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL  193 (226)
T ss_dssp             HHHHHHHHHHHHCTTSS-SSEEHHHHHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHHHHHcC-----CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34678999999999999 9999999999996    557     778888876665    599999999999999997775


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       194 ~  194 (226)
T 2zfd_A          194 R  194 (226)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.64  E-value=7.1e-09  Score=93.79  Aligned_cols=128  Identities=13%  Similarity=0.051  Sum_probs=87.9

Q ss_pred             hccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          299 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      -...++.++|+.||.+ ++ |.|+.+||+.+|..+|.    ...+..+++.+++.+|.|++|.|+|+||+..+..     
T Consensus        48 ~s~~ei~~l~~~Fd~~d~~-G~I~~~E~~~~l~~l~~----~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~  122 (224)
T 1s1e_A           48 FTKRELQVLYRGFKNECPS-GVVNEETFKQIYAQFFP----HGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT  122 (224)
T ss_dssp             CCHHHHHHHHHHHHHHCTT-SCBCHHHHHHHHHTTCT----TSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcC----CCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCC
Confidence            3456788888888885 88 99999999999999871    2378889999999999999999999999976632     


Q ss_pred             -----cCccccccccCCccccccccccccccc----Ceeeeccc---cCCcccccCCCCCCCCCCCCcceeEE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTI----GFSVKNAV---LFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                           ..++...|.+.+|.++..|.......+    |....+..   .....+..  ....+|.+.+|.|+..
T Consensus       123 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~Is~~  193 (224)
T 1s1e_A          123 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDV--FFQKMDKNKDGIVTLD  193 (224)
T ss_dssp             HHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHH--HHHHHCTTCSSCEEHH
T ss_pred             HHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHH--HHHHhCCCCCCcEeHH
Confidence                 223455677777877777755444333    43211110   00011222  3346888999998754

>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B*

Probab=98.64  E-value=1.2e-07  Score=89.07  Aligned_cols=135  Identities=17%  Similarity=0.079  Sum_probs=77.2

Q ss_pred             CCCcEE--EEeecccChhhHHHHHHHHhhc---cCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCC------C
Q 013328           73 ERSSII--CLQEFWVGNEELVDMYEKRLSD---AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF------G  141 (445)
Q Consensus        73 ~~~DII--~LQEv~~~~~~~~~~l~~~l~~---~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~------~  141 (445)
                      ..|||+  +|||+......+.+.+...|..   ..|..+..  ..-.+..++||+|.+..+.+.........+      +
T Consensus        46 ~~~DiyviG~QE~~~~~~~W~~~i~~~L~~~~~~~Y~~v~s--~~L~gi~l~Vfvk~~~~~~I~~v~~~~v~tG~~g~~G  123 (316)
T 4a9c_A           46 IPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAM--QSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLG  123 (316)
T ss_dssp             SCCSEEEEEEESCCSCHHHHHHHHHHHHHHHHSCCCEEEEE--EEETTEEEEEEECGGGGGGEEEEEEEEEEEC------
T ss_pred             CCCcEEEEeccccccchhHHHHHHHHHhccccCCCEEEEEe--eeehheeeeeEEeHHHhhhCcccccceeeeeeeEecC
Confidence            347987  9999976556677788887774   34655432  122345788888776444332222111111      1


Q ss_pred             CceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHH---HHHHcC--CCCCcEEEee
Q 013328          142 DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVES---YQKEHN--LKPIPIILCG  216 (445)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~---~~~~~~--~~~~pvIl~G  216 (445)
                      ++.+..           .++...+..++++|+||.++.  .....|..+...+++.+.-   ......  ....-++++|
T Consensus       124 NKGaV~-----------ir~~~~~ts~~FVn~HLaAg~--~~~~~Rn~d~~~I~~~l~f~~~~~~~~d~~~~~d~vfw~G  190 (316)
T 4a9c_A          124 NKGAVG-----------VSFMFNGTSFGFVNCHLTSGN--EKTARRNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFG  190 (316)
T ss_dssp             CEEEEE-----------EEEEETTEEEEEEEEECCCST--TCHHHHHHHHHHHHHHCCC-------CCTTTTSSEEEEEE
T ss_pred             CCceEE-----------EEEEECCcEEEEEEeccccCc--hHHHHHHHHHHHHHHhCCCCCCCcCccccCCcCCeEEEcC
Confidence            111111           233345789999999998754  3467788888887765421   000000  0112389999


Q ss_pred             cCCCCc
Q 013328          217 DWNGSK  222 (445)
Q Consensus       217 DFN~~p  222 (445)
                      |||---
T Consensus       191 DLNyRi  196 (316)
T 4a9c_A          191 DLNYRL  196 (316)
T ss_dssp             ECCCCB
T ss_pred             CccCCc
Confidence            999743

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.63  E-value=5.9e-08  Score=98.14  Aligned_cols=66  Identities=24%  Similarity=0.366  Sum_probs=59.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+.++|+.||+|++ |+|+.+||+.+|...+       +++++++.+|+.+|.|+||.|+|+||++.|..
T Consensus       415 ~~~~~~~~~F~~~D~d~d-G~I~~~El~~~l~~~~-------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  480 (484)
T 3nyv_A          415 LSRERLERAFRMFDSDNS-GKISSTELATIFGVSD-------VDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK  480 (484)
T ss_dssp             HHHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHhcC-------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence            344678999999999999 9999999999998755       78999999999999999999999999976643

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.63  E-value=6e-08  Score=84.80  Aligned_cols=73  Identities=19%  Similarity=0.305  Sum_probs=58.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccC---CCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||+.++..+    |..   ......++++++.+++.+|.|+||.|+|+||++.+.
T Consensus        96 ~~~~~~~~~f~~~D~d~~-G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~  174 (190)
T 1g8i_A           96 TLDEKLRWAFKLYDLDND-GYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK  174 (190)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhcCCCC-CeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            344678899999999999 999999999999883    300   000346778899999999999999999999997664


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       175 ~  175 (190)
T 1g8i_A          175 A  175 (190)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=98.63  E-value=2.1e-08  Score=87.94  Aligned_cols=63  Identities=24%  Similarity=0.352  Sum_probs=44.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+
T Consensus        63 ~~~~~~f~~~D~d~~-g~i~~~Ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~  125 (193)
T 1bjf_A           63 KFAEHVFRTFDANGD-GTIDFREFIIALSVTS-----RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV  125 (193)
T ss_dssp             HHHHHHHHHHCSSCS-SEEEHHHHHHHHHHHT-----SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHc-----CCCHHHHHHHHHhhcCCCCCCeECHHHHHHHH
Confidence            345667777777777 7777777777777666     44556667777777777777777777776544

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.62  E-value=2e-09  Score=96.36  Aligned_cols=123  Identities=12%  Similarity=0.116  Sum_probs=71.8

Q ss_pred             cchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          301 SLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLA-DEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      ..+++++|+.||.+ ++ |.|+.+||+.+|..+|     ..+. .++++.++..+|.|++|.|+|+||+..+..      
T Consensus        18 ~~ei~~~f~~fD~~~~~-G~is~~El~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~   91 (211)
T 2ggz_A           18 TQETHVWYRTFMMEYPS-GLQTLHEFKTLLGLQG-----LNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM   91 (211)
T ss_dssp             ------CCCSHHHHCTT-SEEEHHHHHHHTTCCS-----CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSH
T ss_pred             HHHHHHHHHHHHHhCCC-CcCCHHHHHHHHHHhC-----CCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCch
Confidence            34577888888887 78 8888888888888877     3332 345888888888888888888888865532      


Q ss_pred             ----cCccccccccCCcccccccccccccccCe-eeeccccCCcc-cccCCCCCCCCCCCCcceeE
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGF-SVKNAVLFPPE-VEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  432 (445)
                          ...+...|.+.+|.++..|.......++- ... ..+.+.+ +..  .-..+|.+.+|.|+.
T Consensus        92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~-~~~~~~~~~~~--~f~~~D~d~dG~I~~  154 (211)
T 2ggz_A           92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ-QTLSPEEFINL--VFHKIDINNDGELTL  154 (211)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCC-CSCTHHHHHHH--HHHHHCTTCSSSBCH
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCC-ccccHHHHHHH--HHHHhCCCCCCCCcH
Confidence                12344556666676666665433333320 000 0011111 111  224567788888764

>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A

Probab=98.62  E-value=1.2e-07  Score=88.79  Aligned_cols=159  Identities=19%  Similarity=0.134  Sum_probs=86.0

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhc--CCCc--EEEEeecccC-----------hhhHHHH
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLY--ERSS--IICLQEFWVG-----------NEELVDM   93 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~--~~~D--II~LQEv~~~-----------~~~~~~~   93 (445)
                      ++.|.||||.+..   .        .         ..+.++|..  ..||  ||||||+...           ...+...
T Consensus         9 ~i~v~TwNvng~~---~--------~---------~~l~~wL~~~~~~pDI~viGlQE~~l~~~~~~~~~~~~~~~W~~~   68 (313)
T 3mtc_A            9 RFFAGTYNVNGQS---P--------K---------ECLRLWLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKEEEWFKA   68 (313)
T ss_dssp             EEEEEEEECTTCC---C--------C---------SCTHHHHSSSCCCCSEEEEEEECSCCSHHHHTTCCCHHHHHHHHH
T ss_pred             EEEEEEEEcCCcc---C--------c---------hhHHHHhcccCCCCCeEEEEEEecccchhhhcccCcchHHHHHHH
Confidence            5778999998542   0        0         124556654  6799  7999999532           1234555


Q ss_pred             HHHHhhc-cCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCC------CceeeeecccccccccccccCCCCc
Q 013328           94 YEKRLSD-AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGDLRQ  166 (445)
Q Consensus        94 l~~~l~~-~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~  166 (445)
                      +...|.. ..|..+..  ..-.+--+.||.|++..+.+.........++      ++.+.           ..+....+.
T Consensus        69 i~~~L~~~~~Y~~v~s--~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG~~g~~GNKGaV-----------~ir~~~~~t  135 (313)
T 3mtc_A           69 VSEGLHPDAKYAKVKL--IRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGV-----------AIRFQFHNT  135 (313)
T ss_dssp             HHHHSCTTSCEEEEEE--EEETTEEEEEEEEGGGGGGEEEEEEEEEECSGGGTSTTSEEE-----------EEEEEETTE
T ss_pred             HHHhcCCCCCEEEEEE--echhhhhhhhhhhhhhhhhcceeEeeeecccccccccCCceE-----------EEEEEECCc
Confidence            5555643 24555432  1112335567777774443332222211111      11111           123334578


Q ss_pred             eEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHH------cCCCCCcEEEeecCCCCc
Q 013328          167 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE------HNLKPIPIILCGDWNGSK  222 (445)
Q Consensus       167 ~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~------~~~~~~pvIl~GDFN~~p  222 (445)
                      .++++|+||.+..  .....|..+...+++.+.--...      .-....-++++||||---
T Consensus       136 s~cFVnsHLaA~~--~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi  195 (313)
T 3mtc_A          136 SICVVNSHLAAHI--EEYERRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRI  195 (313)
T ss_dssp             EEEEEEEECCCSG--GGHHHHHHHHHHHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCB
T ss_pred             EEEEEeeccCCCc--hHHHHHHHHHHHHHHhcccCCCCCccCCccccCCceEEEeccccccc
Confidence            9999999997754  33556777777766544210000      000223499999999754

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.61  E-value=7e-08  Score=87.17  Aligned_cols=73  Identities=14%  Similarity=0.236  Sum_probs=58.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |+|+.+||+.+|..+    |...   .....+.++++.+|+.+|.|+||.|+|+||+..+.
T Consensus       122 ~~~~~l~~~F~~~D~d~d-G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  200 (224)
T 1s1e_A          122 TVHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ  200 (224)
T ss_dssp             CHHHHHHHHHHHHCTTCC-SEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCCCC-CeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            344678999999999999 999999999999886    5100   00122347899999999999999999999997765


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       201 ~  201 (224)
T 1s1e_A          201 E  201 (224)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.61  E-value=2.5e-08  Score=88.29  Aligned_cols=67  Identities=21%  Similarity=0.182  Sum_probs=58.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHH-------hccCCCCCCCCHHHHHHHHHHhcC-CCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTGHKHGLADEETKDLWVQADI-DGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-------~g~~~~~~~~~~~~~~~~~~~~d~-~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |+|+.+||+.++..       .|     ...++++++.+++.+|. |+||.|+|+||+..+.
T Consensus       107 ~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~  180 (204)
T 3e3r_A          107 REAVIAAAFAKLDRSGD-GVVTVDDLRGVYSGRAHPKVRSG-----EWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYS  180 (204)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHCCCTTCHHHHTT-----SSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCC-CeEeHHHHHHHHccccCCccccC-----CCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHH
Confidence            34678999999999999 99999999999984       34     55777889999999998 9999999999997664


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       181 ~  181 (204)
T 3e3r_A          181 G  181 (204)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.60  E-value=9.1e-08  Score=85.00  Aligned_cols=67  Identities=18%  Similarity=0.213  Sum_probs=57.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHH----HhccCCCCCCCCHHHHHHHH----HHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~~~~~~~~~----~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |+|+.+||+.++.    .+|     ..+++++++.++    +.+|.|+||.|+|+||++.+.
T Consensus       109 ~~~~l~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~g-----~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  182 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQT-GFIEREELKEMVVALLHESE-----LVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS  182 (207)
T ss_dssp             HHHHHHHHHHHHCTTCC-SSEEHHHHHHHHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHcc-----cccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34668999999999999 9999999999996    457     778888876655    599999999999999998775


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       183 ~  183 (207)
T 2ehb_A          183 L  183 (207)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.60  E-value=7.9e-08  Score=85.86  Aligned_cols=72  Identities=17%  Similarity=0.214  Sum_probs=58.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCH-HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD-EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |+|+.+||+.++..++-.+.....+. +.++.+|+.+|.|+||.|+|+||+..+..
T Consensus        91 ~~~~l~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A           91 MEQKLKWYFKLYDADGN-GSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             hHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            44678999999999999 99999999999998751000022444 45899999999999999999999977754

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.60  E-value=1.3e-08  Score=85.07  Aligned_cols=97  Identities=8%  Similarity=0.061  Sum_probs=78.6

Q ss_pred             hccchHHHhccccccCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          299 RASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      .....++++|+.+|.|+ + |.|+.+||+.+|+.+|     ..++..+++.++..+|.+    |+|+||+..+...    
T Consensus        11 ~~~~~l~~~F~~~D~d~~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~   80 (146)
T 2qac_A           11 EEKVDESDVRIYFNEKSSG-GKISIDNASYNARKLG-----LAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDK   80 (146)
T ss_dssp             HHHSCHHHHHHHHHHHCBT-TBEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHHhCccCCC-CcccHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCc
Confidence            34567899999999999 9 9999999999999999     779999999999999987    9999999766431    


Q ss_pred             -------CccccccccCCcccccccccccccccCeeeec
Q 013328          374 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  405 (445)
Q Consensus       374 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  405 (445)
                             ..+...|.+..|.+...|.......+|..++.
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~  119 (146)
T 2qac_A           81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTD  119 (146)
T ss_dssp             CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCH
T ss_pred             chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCH
Confidence                   23456677888888887776666666654443

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.59  E-value=1e-07  Score=84.51  Aligned_cols=85  Identities=14%  Similarity=0.216  Sum_probs=63.3

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCC--------CCCCCHHHHHHHHHHh
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGH--------KHGLADEETKDLWVQA  353 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~--------~~~~~~~~~~~~~~~~  353 (445)
                      +.+...+.... ......+..+|+.+|.|++ |.|+.+||+.++..+    |....        ....++++++.+|+.+
T Consensus        79 ~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~  157 (204)
T 1jba_A           79 LEYVAALNLVLRGTLEHKLKWTFKIYDKDRN-GCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLV  157 (204)
T ss_dssp             HHHHHHHHHHSSCCCTHHHHHHHHHHCSSCS-SCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHh
Confidence            34444444333 3445678999999999999 999999999999887    31000        0114567899999999


Q ss_pred             cCCCCceeeHHHHHHHHhc
Q 013328          354 DIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       354 d~~~~g~i~~~eF~~~~~~  372 (445)
                      |.|+||.|+|+||++.+..
T Consensus       158 D~d~dG~Is~~Ef~~~~~~  176 (204)
T 1jba_A          158 DENGDGQLSLNEFVEGARR  176 (204)
T ss_dssp             CCSCCSCBCHHHHHHHHTT
T ss_pred             CCCCCCeEcHHHHHHHHHc
Confidence            9999999999999976643

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.59  E-value=1e-07  Score=83.25  Aligned_cols=73  Identities=15%  Similarity=0.266  Sum_probs=59.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccC---CCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |.|+.+||..++..+    |..   ......+.++++.+|+.+|.|+||.|+|+||++.+.
T Consensus        96 ~~~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  174 (190)
T 1fpw_A           96 TLEEKLSWAFELYDLNHD-GYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK  174 (190)
T ss_dssp             CSTHHHHHHHHHHCSSCS-SEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            345678999999999999 999999999999884    410   000236678899999999999999999999997765


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       175 ~  175 (190)
T 1fpw_A          175 V  175 (190)
T ss_dssp             S
T ss_pred             h
Confidence            4

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.58  E-value=2.4e-08  Score=81.59  Aligned_cols=59  Identities=15%  Similarity=0.256  Sum_probs=52.8

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..+..+|+.+|.|++ |.|+.+||+.++..+|     ...    ++.++..+|.|++|.|+|+||++.+
T Consensus        75 ~~~~~~f~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~----~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           75 IGLKVLYKLMDVDGD-GKLTKEEVTSFFKKHG-----IEK----VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHCCSSS-SEEEHHHHHHHHTTTT-----CHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CccCHHHHHHHHHHhC-----HHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            458899999999999 9999999999999887     322    8999999999999999999999765

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.58  E-value=1.1e-07  Score=83.25  Aligned_cols=72  Identities=14%  Similarity=0.248  Sum_probs=59.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccC---CCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |+|+.+||..++..+    |..   ......+.++++.+++.+|.|+||.|+|+||++.+..
T Consensus        97 ~~~~~~~~f~~~D~d~~-G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (190)
T 2l2e_A           97 LNDKLIWAFQLYDLDNN-GLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR  175 (190)
T ss_dssp             SHHHHHHHHHHHCTTSC-SCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHhHccCCCC-CcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            34678899999999999 999999999999873    310   0013467889999999999999999999999976654

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.57  E-value=1.2e-07  Score=83.67  Aligned_cols=71  Identities=15%  Similarity=0.273  Sum_probs=57.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhcc-CCCCCCCCHH-HHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADE-ETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~~~~~~~~~-~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.++..++- .+.....+.+ .++.+|+.+|.|+||.|+|+||++.+.
T Consensus        86 ~~~~~~~~F~~~D~d~~-G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A           86 VDQKLRWYFKLYDVDGN-GCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34678899999999999 99999999999998741 0000234544 489999999999999999999997664

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.57  E-value=2.4e-09  Score=96.51  Aligned_cols=122  Identities=12%  Similarity=0.101  Sum_probs=87.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHh---------cCCCCceeeHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQA---------DIDGNGVVDYKEFQ  367 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~eF~  367 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|.. +|     ..++.+++..++..+         |.|++|.|+|+||+
T Consensus        44 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~  117 (219)
T 3cs1_A           44 AEAKQRRIELFKKFDKNET-GKLCYDEVYSGCLEVLK-----LDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL  117 (219)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTTC-----GGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhC-----CCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence            3556789999999999999 99999999999988 78     556666676665533         34889999999999


Q ss_pred             HHHh----------ccCccccccccCCcccccccccccccccCe-eeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          368 QRIW----------KTTWSDQRNDLNDEDEDGFVKSSLEQTIGF-SVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       368 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      ..+.          ....|...|.+..|.+...|.......+|. .++..     ++..  ....+|.+.+|.|+.
T Consensus       118 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-----e~~~--l~~~~D~d~dG~I~~  186 (219)
T 3cs1_A          118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVE-----DPAA--LFKELDKNGTGSVTF  186 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCS-----CHHH--HHHHHCTTSSSEEEH
T ss_pred             HHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHH-----HHHH--HHHHhCCCCCCcEeH
Confidence            6542          133456778888888888876665555553 23322     2222  334678888998764

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.57  E-value=5.1e-08  Score=93.15  Aligned_cols=64  Identities=16%  Similarity=0.205  Sum_probs=59.2

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHH-HHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEAL-EQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .+..+|+.||.|++ |+|+.+||+.+| ..+|     ..+++++++.+|..+|.|+||.|+|+||+..+..
T Consensus       254 ~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~  318 (323)
T 1ij5_A          254 VLRILYAFADFDKS-GQLSKEEVQKVLEDAHI-----PESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL  318 (323)
T ss_dssp             HHHHHHHHTCSSSC-SSEEHHHHHHHHHHTTC-----CGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCC-CCccHHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            68899999999999 999999999999 9888     6788889999999999999999999999976643

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.56  E-value=4.8e-08  Score=90.48  Aligned_cols=70  Identities=9%  Similarity=0.102  Sum_probs=59.0

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|+|++ |.|+.+||+.+|..++.. ....+++++++.    ++..+|.|+||.|+|+||+..+..
T Consensus       195 ~~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~  268 (272)
T 2be4_A          195 KRDFEKIFAHYDVSRT-GALEGPEVDGFVKDMMEL-VRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGL  268 (272)
T ss_dssp             HHHHHHHHHHHCTTCC-SEEETHHHHHHHHHHHHH-HSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCC-CeecHHHHHHHHHHHHHH-cCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHcc
Confidence            3568899999999999 999999999999988710 001688988887    999999999999999999976643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.56  E-value=4.3e-08  Score=99.71  Aligned_cols=65  Identities=18%  Similarity=0.330  Sum_probs=58.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+.++|+.||.|++ |+|+.+||+.+|...+       +++++++++|+.+|.|+||.|+|+||++.|..
T Consensus       433 ~~~~~~~~F~~~D~d~d-G~Is~~El~~~l~~~~-------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  497 (504)
T 3q5i_A          433 SEERLRRAFNLFDTDKS-GKITKEELANLFGLTS-------ISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK  497 (504)
T ss_dssp             CHHHHHHHHHHHCTTCC-SEECHHHHHHHTTCSC-------CCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCcHHHHHHHHhhCC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            44688999999999999 9999999999987655       78999999999999999999999999976643

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.53  E-value=2.3e-07  Score=81.01  Aligned_cols=66  Identities=17%  Similarity=0.332  Sum_probs=59.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+++.+|.|++|.|+++||+..+.
T Consensus        61 ~~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~  126 (190)
T 1fpw_A           61 PEDFANHLFTVFDKDNN-GFIHFEEFITVLSTTS-----RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA  126 (190)
T ss_dssp             CSHHHHHHHHTCCSSCS-SEECHHHHHHHHHHHS-----CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCC-CcEeHHHHHHHHHHHc-----cCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            34568889999999999 9999999999999988     667888999999999999999999999997654

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.53  E-value=1.1e-08  Score=92.67  Aligned_cols=124  Identities=13%  Similarity=0.098  Sum_probs=85.4

Q ss_pred             hhccchHHHhccccccC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc--
Q 013328          298 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT--  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~--  373 (445)
                      ......+.++|..+|.|  ++ |.|+.+||+.+|.. +     ....+..++.++..+|.|++|.|+|+||+..+...  
T Consensus        44 ~~ei~~l~~~F~~~D~d~~~~-G~I~~~El~~~l~~-~-----~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~  116 (226)
T 2zfd_A           44 VSEIEALYELFKKISSAVIDD-GLINKEEFQLALFK-T-----NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP  116 (226)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCS-SSBCHHHHHHHHHS-C-----SSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHhCcccCCC-CeEcHHHHHHHHhc-c-----CcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHcc
Confidence            45567789999999999  99 99999999999986 3     23444567889999999999999999999766432  


Q ss_pred             ---------CccccccccCCccccccccccccc----ccCeeeeccccCCccccc--CCCCCCCCCCCCcceeEE
Q 013328          374 ---------TWSDQRNDLNDEDEDGFVKSSLEQ----TIGFSVKNAVLFPPEVEK--GRWPENYSLSDHARLTVV  433 (445)
Q Consensus       374 ---------~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  433 (445)
                               ..+...|.+.+|.++..|......    ..|..++...     +..  -..-..+|.+.+|.|+..
T Consensus       117 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~-----~~~~~~~~f~~~D~d~dG~I~~~  186 (226)
T 2zfd_A          117 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTV-----IEDIIDKTFEEADTKHDGKIDKE  186 (226)
T ss_dssp             TSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHH-----HHHHHHHHHHHHCSSCSSEECHH
T ss_pred             CCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHH-----HHHHHHHHHHHhCCCCCCcCcHH
Confidence                     134556777778777777544332    3444333221     111  000125778889988754

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.52  E-value=1.1e-07  Score=83.06  Aligned_cols=66  Identities=24%  Similarity=0.379  Sum_probs=58.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+++.+|.|++|.|+++||...+.
T Consensus        61 ~~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~  126 (190)
T 2l2e_A           61 PSAFAEYVFNVFDADKN-GYIDFKEFICALSVTS-----RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD  126 (190)
T ss_dssp             HHHHHHHHHHHHCSSST-TCEEHHHHHHHHTTSS-----CSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred             ccHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHHc-----CCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence            34568889999999999 9999999999998887     668889999999999999999999999987653

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.51  E-value=1.2e-07  Score=100.27  Aligned_cols=84  Identities=12%  Similarity=0.085  Sum_probs=72.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |+||.|+|+||+..+..    ...+.
T Consensus       605 ~~l~~~F~~~D~d~d-G~Is~~El~~~L~~~G-----~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~  677 (714)
T 3bow_A          605 QKYQKIYREIDVDRS-GTMNSYEMRKALEEAG-----FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFK  677 (714)
T ss_dssp             HHHHHHHHHHCTTCC-SSEEHHHHHHHHHHTT-----EECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999 9999999999999999     7799999999999999 99999999999977743    23456


Q ss_pred             cccccCCcccccccc
Q 013328          378 QRNDLNDEDEDGFVK  392 (445)
Q Consensus       378 ~~~~~~~~~~~~~~~  392 (445)
                      ..|.+..|.+.-.|.
T Consensus       678 ~~D~d~dG~Is~~el  692 (714)
T 3bow_A          678 QLDPENTGTIQLDLI  692 (714)
T ss_dssp             SSCSSCCSEEEEEHH
T ss_pred             HhCCCCCCcEEHHHH
Confidence            677777777666553

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.51  E-value=4.5e-09  Score=93.76  Aligned_cols=121  Identities=8%  Similarity=0.062  Sum_probs=83.8

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---  374 (445)
                      ......+.++|..+|.|++ |.|+.+||+.++ .+|     ..++.   +.++..+|.|++|.|+|+||+..+....   
T Consensus        25 ~~~~~~l~~~F~~~D~d~d-G~Is~~El~~~~-~lg-----~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~   94 (208)
T 2ct9_A           25 HSQITRLYSRFTSLDKGEN-GTLSREDFQRIP-ELA-----INPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIE   94 (208)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECTGGGGGCH-HHH-----TSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHH-HcC-----CCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhcccc
Confidence            4556789999999999999 999999999965 777     44443   5688899999999999999997664321   


Q ss_pred             -----------------------ccccccccCCccccccccccccccc-CeeeeccccCCccccc--CCCCCCCCCCCCc
Q 013328          375 -----------------------WSDQRNDLNDEDEDGFVKSSLEQTI-GFSVKNAVLFPPEVEK--GRWPENYSLSDHA  428 (445)
Q Consensus       375 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  428 (445)
                                             .+...|.+.+|.++..|.......+ |..++...     +..  -.....+|.+.+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~-----~~~l~~~~~~~~D~d~dG  169 (208)
T 2ct9_A           95 DNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQ-----LGSIADRTIQEADQDGDS  169 (208)
T ss_dssp             -----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHH-----HHHHHHHHHHHHCSSSSS
T ss_pred             chhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHHhCCCCCC
Confidence                                   1244566777777777765555443 54433322     111  0013467888899


Q ss_pred             ceeEE
Q 013328          429 RLTVV  433 (445)
Q Consensus       429 ~~~~~  433 (445)
                      .|+..
T Consensus       170 ~Is~~  174 (208)
T 2ct9_A          170 AISFT  174 (208)
T ss_dssp             SEEHH
T ss_pred             cCcHH
Confidence            88753

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.51  E-value=1.9e-07  Score=86.03  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=59.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCC---CCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.|++ |+|+.+||..++..+    |....   ....++++++.+|+.+|.|+||.|+|+||++.+.
T Consensus       162 ~~~~~l~~~F~~~D~d~d-G~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~  240 (256)
T 2jul_A          162 TVHEKLKWAFNLYDINKD-GCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ  240 (256)
T ss_dssp             CHHHHHHHHHHHTCCSSS-SCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            345678999999999999 999999999999886    41000   0234678899999999999999999999997665


Q ss_pred             c
Q 013328          372 K  372 (445)
Q Consensus       372 ~  372 (445)
                      .
T Consensus       241 ~  241 (256)
T 2jul_A          241 K  241 (256)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.50  E-value=1.4e-08  Score=102.78  Aligned_cols=66  Identities=21%  Similarity=0.326  Sum_probs=41.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|+.||+|++ |.|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||++.+.
T Consensus       415 ~~~~~~~~F~~~D~d~d-G~Is~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  480 (486)
T 3mwu_A          415 SRERMERAFKMFDKDGS-GKISTKELFKLFSQAD-----SSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ  480 (486)
T ss_dssp             CHHHHHHHHHHHCSSCS-SSBCSSCC-------------------------CCCCSSCSSSBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            34678999999999999 9999999999999999     778999999999999999999999999997654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.49  E-value=7e-08  Score=97.91  Aligned_cols=65  Identities=22%  Similarity=0.279  Sum_probs=56.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.||+|++ |+|+.+||+.+|...       .+++++++++|+.+|.|+||.|+|+||++.|..
T Consensus       424 ~~~~~~~~F~~~D~d~~-G~Is~~El~~~l~~~-------~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  488 (494)
T 3lij_A          424 SKDKLESAFQKFDQDGN-GKISVDELASVFGLD-------HLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK  488 (494)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHC-CC-------SCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHhc-------CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            44678999999999999 999999999998653       377889999999999999999999999976643

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.49  E-value=1.3e-07  Score=82.58  Aligned_cols=129  Identities=13%  Similarity=0.060  Sum_probs=86.0

Q ss_pred             hhccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          298 RRASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      .-...++.++|+.||.+ ++ |.|+.+||+.+|..++-    ...+..+++.++..+|.|++|.|+|+||+..+..    
T Consensus        21 ~~~~~~i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~~----~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~   95 (190)
T 1g8i_A           21 YFTEKEVQQWYKGFIKDCPS-GQLDAAGFQKIYKQFFP----FGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG   95 (190)
T ss_dssp             SSCHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCT----TSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhCCC-CcCCHHHHHHHHHHhCC----CCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCC
Confidence            34557789999999998 89 99999999999999830    2356788999999999999999999999976532    


Q ss_pred             ------cCccccccccCCcccccccccccccc----cCeeee---ccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKSSLEQT----IGFSVK---NAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                            ...+...|.+.+|.++..|.......    .|....   .......++..  .-..+|.+.+|.|+..
T Consensus        96 ~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~  167 (190)
T 1g8i_A           96 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDR--IFAMMDKNADGKLTLQ  167 (190)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHH--HHHHHCSSCSSEEEHH
T ss_pred             CHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHH--HHHHhcCCCCCcEeHH
Confidence                  22345567777777777765443333    232211   00000111111  2346788889988653

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=98.47  E-value=1.3e-07  Score=82.82  Aligned_cols=89  Identities=10%  Similarity=0.023  Sum_probs=70.6

Q ss_pred             hccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          299 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      -...++.++|+.||.+ ++ |.|+.+||+.+|..++     .. .+.++++.++..+|.|++|.|+|+||+..+..    
T Consensus        22 ~~~~~i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~   95 (193)
T 1bjf_A           22 FTEHEIQEWYKGFLRDCPS-GHLSMEEFKKIYGNFF-----PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG   95 (193)
T ss_dssp             CCHHHHHHHHHHHHHHSTT-SEEEHHHHHHHHTTTS-----SSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSS
T ss_pred             CCHHHHHHHHHHHHHHCCC-CCcCHHHHHHHHHHhc-----CcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCC
Confidence            4456788999999998 89 9999999999999987     33 35678999999999999999999999976632    


Q ss_pred             ------cCccccccccCCccccccccc
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKS  393 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~  393 (445)
                            ...+...|.+.+|.++..|..
T Consensus        96 ~~~~~~~~~f~~~D~d~~G~I~~~E~~  122 (193)
T 1bjf_A           96 KLEQKLKWAFSMYDLDGNGYISKAEML  122 (193)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             CHHHHHHHHHhhcCCCCCCeECHHHHH
Confidence                  123345566777777766643

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.42  E-value=3.2e-07  Score=81.43  Aligned_cols=79  Identities=14%  Similarity=0.277  Sum_probs=64.8

Q ss_pred             HHHHHHHHHhhh--hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLLR--RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~~--~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      +.+...+.....  .....+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++
T Consensus        54 ~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~-G~i~~~Ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~I~~~  127 (207)
T 2d8n_A           54 QQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLD-GTLDFKEYVIALHMTT-----AGKTNQKLEWAFSLYDVDGNGTISKN  127 (207)
T ss_dssp             HHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHS-----CSSSSTTHHHHHHHHCTTCSSEECHH
T ss_pred             HHHHHHHHHhccCCCcHHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHHc-----CCCHHHHHHHHHHHhcCCCCCeEcHH
Confidence            344444443321  344678999999999999 9999999999999988     66778899999999999999999999


Q ss_pred             HHHHHHh
Q 013328          365 EFQQRIW  371 (445)
Q Consensus       365 eF~~~~~  371 (445)
                      ||...+.
T Consensus       128 E~~~~l~  134 (207)
T 2d8n_A          128 EVLEIVM  134 (207)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9997664

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.42  E-value=3.5e-07  Score=80.57  Aligned_cols=64  Identities=25%  Similarity=0.391  Sum_probs=55.8

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+.
T Consensus        52 ~~~~~~f~~~D~d~~-G~I~~~Ef~~~~~~~~-----~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~  115 (198)
T 2r2i_A           52 KYVEQMFETFDFNKD-GYIDFMEYVAALSLVL-----KGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK  115 (198)
T ss_dssp             HHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHS-----SCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CeEcHHHHHHHHHHHc-----cCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            457889999999999 9999999999999887     667788899999999999999999999986654

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.40  E-value=4.2e-09  Score=91.93  Aligned_cols=121  Identities=8%  Similarity=0.037  Sum_probs=83.9

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh------ccCCCCCCCCHHHHHHHH---------HHhcCCCCceee
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL------NLTGHKHGLADEETKDLW---------VQADIDGNGVVD  362 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~------g~~~~~~~~~~~~~~~~~---------~~~d~~~~g~i~  362 (445)
                      ......++++|+.+|.|++ |.|+.+||+.+|..+      |     ..++.++++.++         +.+|.|++|.|+
T Consensus        10 ~~~~~~l~~~F~~~D~d~d-G~i~~~El~~~l~~~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~   83 (186)
T 2hps_A           10 AYHLRKMKTRMQRVDVTGD-GFISREDYELIAVRIAKIAKLS-----AEKAEETRQEFLRVADQLGLAPGVRISVEEAAV   83 (186)
T ss_dssp             HHHHHHHHHHHHTTCTTCS-SEEEHHHHHHHHHHHHHHHTCC-----HHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCCC-CccCHHHHHHHHHHHHHHHHcC-----CCCCcHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence            3456779999999999999 999999999999877      7     567788899885         999999999999


Q ss_pred             HHHHHHHHhccC-------------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcc
Q 013328          363 YKEFQQRIWKTT-------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHAR  429 (445)
Q Consensus       363 ~~eF~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (445)
                      |+|  ..+....             +....|.+..|.+...|.......+|..++.     .++..  ....+|.+.+|.
T Consensus        84 ~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~-----~~~~~--~~~~~D~d~dG~  154 (186)
T 2hps_A           84 NAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTD-----DKAIT--CFNTLDFNKNGQ  154 (186)
T ss_dssp             HHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCH-----HHHHH--HHHHHCTTCSSE
T ss_pred             HHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCH-----HHHHH--HHHHHcCCCCCc
Confidence            999  2332211             1123356666666666655444444432221     12222  334678888998


Q ss_pred             eeEE
Q 013328          430 LTVV  433 (445)
Q Consensus       430 ~~~~  433 (445)
                      |+..
T Consensus       155 i~~~  158 (186)
T 2hps_A          155 ISRD  158 (186)
T ss_dssp             EEHH
T ss_pred             CcHH
Confidence            8643

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.37  E-value=2.1e-07  Score=101.15  Aligned_cols=123  Identities=12%  Similarity=0.151  Sum_probs=73.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      ....++++|+.+|.+ + |.|+.+||+.+|..++...   ....++.++++.|+..+|.|+||.|+|+||+..+..    
T Consensus       729 ~~~~l~~~F~~~D~~-~-G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~~~l  806 (900)
T 1qxp_A          729 EERQFRKLFVQLAGD-D-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW  806 (900)
T ss_dssp             --------CCCCTTC-S-SCBCHHHHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-C-CccCHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHHH
Confidence            346788999999997 8 9999999999998766210   012577899999999999999999999999965522    


Q ss_pred             cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                      ...+...|.+.+|.++..|.......+|+.++...     +..  ....|| +.+|.|+-
T Consensus       807 ~~~F~~~D~d~dG~Is~~El~~~l~~~g~~ls~~~-----~~~--l~~~~d-d~dg~Is~  858 (900)
T 1qxp_A          807 QGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHI-----YSM--IIRRYS-DETGNMDF  858 (900)
T ss_dssp             SSCC----CCSCC-------CCTTGGGTCCCCSCC-----CC-----------CCSCCCH
T ss_pred             HHHHHHhCCCCCCccCHHHHHHHHHhcCCCCCHHH-----HHH--HHHHhc-CCCCeECH
Confidence            56778889999999999998888888887765443     222  345566 77787653

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.35  E-value=3.1e-07  Score=81.51  Aligned_cols=126  Identities=13%  Similarity=0.077  Sum_probs=84.8

Q ss_pred             hhccchHHHhccccccC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC-
Q 013328          298 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT-  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~-  374 (445)
                      ......+.++|..+|.|  ++ |.|+.+||+.+|.. .     ....+..++.++..+|.|++|.|+|+||+..+.... 
T Consensus        33 ~~~~~~l~~~F~~~D~d~~~~-G~i~~~e~~~~l~~-~-----~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~  105 (207)
T 2ehb_A           33 VEEVEALYELFKKLSSSIIDD-GLIHKEEFQLALFR-N-----RNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHP  105 (207)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCS-SCEEHHHHHHHHHS-C-----TTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGST
T ss_pred             HHHHHHHHHHHHHhccccCCC-CccCHHHHHHHHhc-c-----ccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcc
Confidence            44567789999999999  99 99999999999986 3     334456788999999999999999999997664321 


Q ss_pred             ----------ccccccccCCccccccccccccc----ccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          375 ----------WSDQRNDLNDEDEDGFVKSSLEQ----TIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       375 ----------~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                                .+...|.+.+|.+...|......    ..|..++...+ ...+..  .-..+|.+.+|.|+..
T Consensus       106 ~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~-~~~~~~--~f~~~D~d~dG~I~~~  175 (207)
T 2ehb_A          106 SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMI-EVMVDK--AFVQADRKNDGKIDID  175 (207)
T ss_dssp             TSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHH-HHHHHH--HHHHHCTTCSSEECHH
T ss_pred             CCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHH-HHHHHH--HHHHhCCCCCCcCcHH
Confidence                      23455677777777766543332    23433332210 000000  1125788889988754

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.32  E-value=4.7e-07  Score=98.46  Aligned_cols=79  Identities=13%  Similarity=0.097  Sum_probs=65.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.||.|++ |.|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||+..+..    ...+.
T Consensus       607 ~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~  679 (900)
T 1qxp_A          607 RNYLTIFRKFDLDKS-GSMSAYEMRMAIEAAG-----FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFK  679 (900)
T ss_dssp             HHHHHHHGGGCTTCC-SCCBHHHHHHHHHHTT-----EECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCCC-CeECHHHHHHHHHHhC-----CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999 9999999999999999     7799999999999999 99999999999976643    12334


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+..|.+
T Consensus       680 ~~D~d~~G~I  689 (900)
T 1qxp_A          680 QLDPENTGTI  689 (900)
T ss_dssp             HSCSSCCSCE
T ss_pred             hhCCCCCceE
Confidence            4455555544

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.32  E-value=5.6e-08  Score=100.63  Aligned_cols=64  Identities=11%  Similarity=0.171  Sum_probs=5.2

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++++|+.||.|++ |+|+.+||+.+|+.+|     ..+++++++.+|+.+|.|++|.|+|+||+..+.
T Consensus        11 ~~l~~~F~~fD~d~d-G~Is~~El~~~l~~lg-----~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~   74 (624)
T 1djx_A           11 HWIHSCLRKADKNKD-NKMNFKELKDFLKELN-----IQVDDGYARKIFRECDHSQTDSLEDEEIETFYK   74 (624)
T ss_dssp             ---------------------------------------------------------------CTTHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            468899999999999 9999999999999999     778899999999999999999999999996653

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.30  E-value=8.9e-07  Score=81.54  Aligned_cols=64  Identities=22%  Similarity=0.280  Sum_probs=52.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+
T Consensus       128 ~~~~~~~f~~~D~d~d-G~I~~~Ef~~~l~~~~-----~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l  191 (256)
T 2jul_A          128 TTYAHFLFNAFDADGN-GAIHFEDFVVGLSILL-----RGTVHEKLKWAFNLYDINKDGCITKEEMLAIM  191 (256)
T ss_dssp             HHHHHHHHHHSSCSCC-SEECSHHHHHHHHHHH-----SCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCC-CcCcHHHHHHHHHHHh-----ccChHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3567788888888888 8888888888888877     55677888888888888888888888888655

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.26  E-value=4.1e-07  Score=98.65  Aligned_cols=67  Identities=13%  Similarity=0.219  Sum_probs=61.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.||.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus       723 ~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  789 (863)
T 1sjj_A          723 QMNEFRASFNHFDRKKT-GMMDCEDFRACLISMG-----YNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSR  789 (863)
T ss_dssp             HHHHHHHHHTTTCSSSS-SEEESTTHHHHHHHHT-----CCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            34678999999999999 9999999999999999     7788999999999999999999999999976643

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=98.24  E-value=1.7e-07  Score=77.38  Aligned_cols=65  Identities=14%  Similarity=0.160  Sum_probs=55.8

Q ss_pred             hccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.-.|..+|.| +| |.|+..||..+++.+.       ..+.-++.+++.+|.|+||.|+++||+..+.
T Consensus        74 ~~~~~l~W~F~~lD~n~~D-G~Isr~EL~~i~~~l~-------~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg  139 (151)
T 1sra_A           74 MYIFPVHWQFGQLDQHPID-GYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             GGHHHHHHHHHHHCCTTCS-SEECTTTTGGGGSTTS-------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             cchhHHHhHHHHHCCCCCC-CcCcHHHHHHHHHHhc-------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence            4445688899999997 99 9999999999886644       5677899999999999999999999996553

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.22  E-value=1.9e-06  Score=77.91  Aligned_cols=64  Identities=17%  Similarity=0.280  Sum_probs=46.5

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+..+|+.+|.|++ |.|+.+||..++..++     ...++++++.+|+.+|.|+||.|+++||...+
T Consensus       101 ~~~~~~lf~~~D~d~~-G~I~~~Ef~~~l~~~~-----~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l  164 (229)
T 3dd4_A          101 TTYAHFLFNAFDTDHN-GAVSFEDFIKGLSILL-----RGTVQEKLNWAFNLYDINKDGYITKEEMLDIM  164 (229)
T ss_dssp             HHHHHHHHHTTCSSCC-SSCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCC-CeEeHHHHHHHHHHHc-----CCChHHHHHHHHHHhCCCCCCeECHHHHHHHH
Confidence            3456677777888887 8888888877777765     34556677777888888888888888877544

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.19  E-value=1.2e-07  Score=84.98  Aligned_cols=126  Identities=10%  Similarity=0.035  Sum_probs=79.9

Q ss_pred             hhccchHHHhcccccc--------CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCce-eeHHHHHH
Q 013328          298 RRASLTETDAFAFLKA--------DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV-VDYKEFQQ  368 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~--------~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~eF~~  368 (445)
                      ......+.++|..+|.        ++| |.|+.+||+. |..+|     ..+..   +.++..+|.|++|. |+|+||+.
T Consensus        47 ~~ei~~l~~~F~~~D~~~~~~d~~~~d-G~I~~~E~~~-l~~lg-----~~~~~---~~lf~~~D~d~dG~~I~f~EF~~  116 (214)
T 2l4h_A           47 KQEILLAHRRFCELLPQEQRSVESSLR-AQVPFEQILS-LPELK-----ANPFK---ERICRVFSTSPAKDSLSFEDFLD  116 (214)
T ss_dssp             HHHHHHHHHHHHHHSCGGGCCHHHHTT-SEECHHHHTT-CHHHH-----TSTTH---HHHHHHHCCSSSCCSEEHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcccccccccccC-CcCCHHHHHH-hhccC-----CChHH---HHHHHHhCcCCCCCEecHHHHHH
Confidence            3445567777888876        567 8999999999 88888     55553   46788889999999 99999987


Q ss_pred             HHhcc-----------CccccccccCCcccccccccccccccCeeeeccccCCccccc--CCCCCCCCCCCCcceeEE
Q 013328          369 RIWKT-----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEK--GRWPENYSLSDHARLTVV  433 (445)
Q Consensus       369 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  433 (445)
                      .+...           ..|...|.+.+|.+...|.......+|.......+.+.++..  -.....+|.+.+|.|+..
T Consensus       117 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~  194 (214)
T 2l4h_A          117 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS  194 (214)
T ss_dssp             HHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSH
T ss_pred             HHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHH
Confidence            66321           134455777778777777655554444210001111222110  002245688889988754

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=98.14  E-value=2e-06  Score=91.30  Aligned_cols=79  Identities=10%  Similarity=0.095  Sum_probs=50.8

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCCC---------CCHHHHHHHHHHhcCC
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHG---------LADEETKDLWVQADID  356 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~---------~~~~~~~~~~~~~d~~  356 (445)
                      +.|+.++..+.  ...++.++|+.||.+++ |+|+.+||+.+|+.+ |     ..         ++++++++||+++|.|
T Consensus       206 ~EF~~~~~~l~--~r~el~~aF~~fD~d~~-g~Is~~eL~~fL~~~Qg-----e~~~~~~~~~~~t~ee~~~iI~~~d~d  277 (799)
T 2zkm_X          206 PVYKSFLMSLC--PRPEIDEIFTSYHAKAK-PYMTKEHLTKFINQKQR-----DSRLNSLLFPPARPDQVQGLIDKYEPS  277 (799)
T ss_dssp             HHHHHHHHHHS--CCHHHHTTCC---------CCCHHHHHHHHHHTCC--------------------CHHHHHHHHCCC
T ss_pred             HHHHHHHHHcc--CHHHHHHHHHHhccCCC-CeEcHHHHHHHHHHhcC-----CcccccccccCCCHHHHHHHHHHhhcc
Confidence            55655555433  34689999999999999 999999999999998 5     33         6788999999999999


Q ss_pred             ----CCceeeHHHHHHHHhcc
Q 013328          357 ----GNGVVDYKEFQQRIWKT  373 (445)
Q Consensus       357 ----~~g~i~~~eF~~~~~~~  373 (445)
                          ++|.|+|+||+++|...
T Consensus       278 ~~~~~dg~is~eeF~~~L~S~  298 (799)
T 2zkm_X          278 GINAQRGQLSPEGMVWFLCGP  298 (799)
T ss_dssp             --------CCHHHHHHHHHST
T ss_pred             cccccCCccchhhhhhcccCc
Confidence                89999999999888653

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.11  E-value=2.9e-07  Score=79.98  Aligned_cols=121  Identities=11%  Similarity=0.003  Sum_probs=83.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhc---CCCCceeeHHHHHHHHhc----
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD---IDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d---~~~~g~i~~~eF~~~~~~----  372 (445)
                      ...+++++|..||  ++ |+|+.+||+.+|   |     ..+++++++.++..+|   .+++|.|+|+||+..+..    
T Consensus        26 ~~~~~~~~F~~~D--~d-G~I~~~el~~~l---g-----~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~   94 (179)
T 3a8r_A           26 GWAAVEKRFNQLQ--VD-GVLLRSRFGKCI---G-----MDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQ   94 (179)
T ss_dssp             CHHHHHHHHHHHC--BT-TBEEGGGHHHHH---T-----CCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCC
T ss_pred             hHHHHHHHHhccC--CC-CCCcHHHHHHHH---C-----CCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCC
Confidence            4568899999999  78 999999999964   7     5678888999998887   567899999999865421    


Q ss_pred             ------cCccccccccCCccccccccccccc-ccCee-eecc-ccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVKSSLEQ-TIGFS-VKNA-VLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                            ...|...|.+.+|.+...|...... .+|.. ++.. .....++..  ....+|.+.+|.|+..
T Consensus        95 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~D~d~dG~I~~~  162 (179)
T 3a8r_A           95 GFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTAL--IMEELDPTNLGYIEME  162 (179)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH--HHHHHSTTCCSEECHH
T ss_pred             CHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHH--HHHHhCCCCCCcCcHH
Confidence                  1234556778888888877655554 45532 2000 001112222  4456888999988753

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.07  E-value=1.5e-06  Score=72.46  Aligned_cols=68  Identities=18%  Similarity=0.118  Sum_probs=25.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......|+.+|.|++ |.|+.+||..++..+.-.......+.++++.+|+.+|.|+||.|+++||...+
T Consensus        27 ~~~~~~f~~~D~d~d-G~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l   94 (143)
T 3a4u_B           27 AASFSQPGSMGLDKN-TVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAI   94 (143)
T ss_dssp             -------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTC
T ss_pred             CCCHHHHHHhCCCCC-CcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Confidence            345568999999999 99999999999876520000011335678999999999999999999998543

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=97.91  E-value=1.1e-05  Score=83.49  Aligned_cols=66  Identities=8%  Similarity=0.035  Sum_probs=58.5

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCCC-CCHHHHHHHHHHhcCC----CCceeeHHHHHHHHhcc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHG-LADEETKDLWVQADID----GNGVVDYKEFQQRIWKT  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~-~~~~~~~~~~~~~d~~----~~g~i~~~eF~~~~~~~  373 (445)
                      ..++.++|+.||.+ + |+|+.+||+.+|... |     .. ++++++++||+++|.|    ++|.|+|+||+++|...
T Consensus        79 ~~el~~aF~~fD~~-~-G~Is~~EL~~fL~~~qg-----e~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~  150 (624)
T 1djx_A           79 RAEIDRAFEEAAGS-A-ETLSVERLVTFLQHQQR-----EEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA  150 (624)
T ss_dssp             CHHHHHHHHHHHTT-S-SSEEHHHHHHHHHHTSC-----CSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred             HHHHHHHHHHhcCC-C-CeecHHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence            36799999999985 8 999999999999976 5     44 8899999999999998    79999999999888653

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=97.90  E-value=3.4e-06  Score=89.50  Aligned_cols=100  Identities=8%  Similarity=0.052  Sum_probs=69.0

Q ss_pred             ccchhHHHHHHHHHhh---hhccchHHHhcc--ccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC-
Q 013328          282 KASWSEAVFGMFKCLL---RRASLTETDAFA--FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI-  355 (445)
Q Consensus       282 ~~s~~~~v~~~~~~~~---~~~~~~~~~~F~--~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~-  355 (445)
                      ...|...+..++...+   ......++++|.  .||+|++ |+|+..||+.+|..          ..++++++++++|. 
T Consensus       123 a~~Wv~GL~~L~~~~~~~~~~~~~~Lk~~F~~~~fD~d~d-G~Is~~EL~~~l~~----------~~~ev~~li~~~d~~  191 (799)
T 2zkm_X          123 GKAWAEDVLALVKHPLTANASRSTFLDKILVKLKMQLNSE-GKIPVKNFFQMFPA----------DRKRVEAALSACHLP  191 (799)
T ss_dssp             HHHHHHHHHHHHHCTTGGGCCHHHHHHHHHHHHHHSCCTT-SCEEHHHHHHHSCS----------CHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHhccccHHHHHHHHhHHhccCCCCC-CeECHHHHHHHHhh----------hHHHHHHHHHHhCcC
Confidence            4468888877776654   233456899999  8999999 99999999998642          46899999999985 


Q ss_pred             ------CCCceeeHHHHHHHHhc-------cCccccccccCCcccccccc
Q 013328          356 ------DGNGVVDYKEFQQRIWK-------TTWSDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       356 ------~~~g~i~~~eF~~~~~~-------~~~~~~~~~~~~~~~~~~~~  392 (445)
                            +++|.|+|+||+..+..       ...|...+.+..|.+..++.
T Consensus       192 ~~~~D~d~~g~idf~EF~~~~~~l~~r~el~~aF~~fD~d~~g~Is~~eL  241 (799)
T 2zkm_X          192 KGKNDAINPEDFPEPVYKSFLMSLCPRPEIDEIFTSYHAKAKPYMTKEHL  241 (799)
T ss_dssp             CCTTCEECGGGCCHHHHHHHHHHHSCCHHHHTTCC--------CCCHHHH
T ss_pred             ccccccCCCCcCCHHHHHHHHHHccCHHHHHHHHHHhccCCCCeEcHHHH
Confidence                  88999999999976533       22334444555555555443

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=97.87  E-value=1.2e-05  Score=63.09  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..++.++|+.+|  ++ |.|+.+||..++...       ..+.++++.+|+.+|.|++|.|+.+||...+
T Consensus         9 ~~ei~~~~~~~D--~~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   68 (109)
T 3fs7_A            9 AKDIESALSSCQ--AA-DSFNYKSFFSTVGLS-------SKTPDQIKKVFGILDQDKSGFIEEEELQLFL   68 (109)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTCT-------TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTG
T ss_pred             HHHHHHHHHhcC--CC-CcCcHHHHHHHHhcC-------CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHH
Confidence            467888999998  78 999999999987642       2568899999999999999999999998544

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=97.86  E-value=2.2e-05  Score=61.62  Aligned_cols=61  Identities=13%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+.
T Consensus         8 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   68 (109)
T 1rwy_A            8 AEDIKKAIGAFT--AA-DSFDHKKFFQMVGLKK-------KSADDVKKVFHILDKDKSGFIEEDELGSILK   68 (109)
T ss_dssp             HHHHHHHHHTTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHSTTCSSEECHHHHHTHHH
T ss_pred             HHHHHHHHHHcC--CC-CcEeHHHHHHHHhcCc-------chHHHHHHHHHHHCCCCCCeEcHHHHHHHHH
Confidence            356888899998  88 9999999999875322       5678899999999999999999999986554

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=97.83  E-value=2.1e-05  Score=61.70  Aligned_cols=61  Identities=18%  Similarity=0.275  Sum_probs=51.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++.++|+.+|.  + |.|+.+||..++...       ..+.++++.+|+.+|.|++|.|+.+||...+.
T Consensus         8 ~~ei~~~~~~~d~--~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   68 (109)
T 5pal_A            8 ADDINKAISAFKD--P-GTFDYKRFFHLVGLK-------GKTDAQVKEVFEILDKDQSGFIEEEELKGVLK   68 (109)
T ss_dssp             HHHHHHHHHHTCS--T-TCCCHHHHHHHHTCT-------TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHH
T ss_pred             HHHHHHHHHHhCC--C-CcCcHHHHHHHHhhc-------cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            3568889999987  7 999999999987542       35688999999999999999999999986553

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=97.82  E-value=2.7e-05  Score=61.12  Aligned_cols=61  Identities=15%  Similarity=0.232  Sum_probs=51.3

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+.
T Consensus         9 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   69 (109)
T 1bu3_A            9 DADVAAALKACE--AA-DSFNYKAFFAKVGLTA-------KSADDIKKAFFVIDQDKSGFIEEDELKLFLQ   69 (109)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHH
T ss_pred             HHHHHHHHHHhC--CC-CcCcHHHHHHHHHcCh-------hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            356788888888  88 9999999999875432       4678899999999999999999999986554

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=97.80  E-value=2.2e-05  Score=61.52  Aligned_cols=59  Identities=15%  Similarity=0.179  Sum_probs=50.2

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+
T Consensus         9 ~e~~~l~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   67 (108)
T 2pvb_A            9 ADVAAALAACS--AA-DSFKHKEFFAKVGLAS-------KSLDDVKKAFYVIDQDKSGFIEEDELKLFL   67 (108)
T ss_dssp             HHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHHhC--CC-CcCcHHHHHHHHhCCh-------hHHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            56788888888  78 9999999999875433       567889999999999999999999998544

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=97.79  E-value=4.4e-06  Score=68.81  Aligned_cols=64  Identities=6%  Similarity=-0.084  Sum_probs=30.9

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+++|+.+|.|++ |.|+.+||..++...--    .....++++.+|+.+|.|++|.|+.+||...+.
T Consensus         4 ~~~~l~~~~D~d~~-G~I~~~EF~~~~~~~~~----~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (135)
T 3h4s_E            4 TEKSMLLETTSTTK-METKYEDMLPVMAEKMD----VEEFVSELCKGFSLLADPERHLITAESLRRNSG   67 (135)
T ss_dssp             ----------------CCCC-----------C----HHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGG
T ss_pred             hHHHHHHHHcCCCC-CcEeHHHHHHHHHHHcc----ccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            35678999999999 99999999998865320    122356789999999999999999999996654

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=97.78  E-value=2.9e-05  Score=70.67  Aligned_cols=62  Identities=11%  Similarity=0.155  Sum_probs=54.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .-+..+|+.||.|++ |+|+..||+.+|..+.     ..-.++.++-+|+.+| |+||.|+.+|+...+
T Consensus       132 ~~a~~lf~~FD~~~~-G~I~f~ef~~aLs~l~-----rG~leeKL~w~F~lyD-D~~G~I~~~El~~il  193 (261)
T 1eg3_A          132 MCLNWLLNVYDTGRT-GRIRVLSFKTGIISLC-----KAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLL  193 (261)
T ss_dssp             HHHHHHHHHHCTTCC-SEEEHHHHHHHHHHTS-----SSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHccCCCC-ceEeHHHHHHHHHHHc-----CCCHHHHHHHHHheee-CCCCCCcHHHHHHHH
Confidence            345568999999999 9999999999999885     4466788999999999 999999999998655

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=97.78  E-value=2.3e-05  Score=61.41  Aligned_cols=60  Identities=17%  Similarity=0.183  Sum_probs=50.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..++.++|+.+|  ++ |.|+.+||..++...       ....++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   67 (108)
T 1rro_A            8 AEDIAAALQECQ--DP-DTFEPQKFFQTSGLS-------KMSASQVKDIFRFIDNDQSGYLDGDELKYFL   67 (108)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHSGG-------GSCHHHHHHHHHHHCTTCSSEECTHHHHTGG
T ss_pred             HHHHHHHHHHcc--CC-CCcCHHHHHHHHhcC-------cccHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            356788888888  88 999999999887432       2567889999999999999999999998544

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=97.75  E-value=8e-05  Score=67.78  Aligned_cols=70  Identities=7%  Similarity=0.020  Sum_probs=53.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCCC----CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHK----HGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+.++-+|+.+| |++ |.|+.+||..+|+.+    .+-|+.    ....++-++++|+.+|  +||.|+.+||++.+
T Consensus       165 ~leeKL~w~F~lyD-D~~-G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~  240 (261)
T 1eg3_A          165 HLEDKYRYLFKQVA-SST-GFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWM  240 (261)
T ss_dssp             CHHHHHHHHHHHHS-CTT-SCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHH
T ss_pred             CHHHHHHHHHheee-CCC-CCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHH
Confidence            44568899999999 999 999999999998652    000111    2234677899999996  78999999999876


Q ss_pred             hc
Q 013328          371 WK  372 (445)
Q Consensus       371 ~~  372 (445)
                      ..
T Consensus       241 ~~  242 (261)
T 1eg3_A          241 RL  242 (261)
T ss_dssp             HT
T ss_pred             Hh
Confidence            54

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=97.70  E-value=8.1e-05  Score=64.22  Aligned_cols=60  Identities=10%  Similarity=0.260  Sum_probs=42.0

Q ss_pred             HHhccccccCCCCCc-ccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          305 TDAFAFLKADNDGDY-ITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       305 ~~~F~~~D~~~~~G~-i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++|+.+|.|++ |. |+.+||..++..+.     .. ...++++.+|+.+|.|++|.|+.+||...+
T Consensus        63 ~~l~~~~D~d~~-G~~I~~~EF~~~~~~~~-----~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l  124 (183)
T 1dgu_A           63 ERICRVFSTSPA-KDSLSFEDFLDLLSVFS-----DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV  124 (183)
T ss_dssp             HHHHHHHSCSSS-SCCCCHHHHHHHHHHHS-----TTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHhCCCCC-CCEecHHHHHHHHHHhc-----CCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            346666777887 77 88888877777654     22 234567777888888888888888887544

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=97.68  E-value=3.7e-05  Score=60.39  Aligned_cols=60  Identities=13%  Similarity=0.258  Sum_probs=50.5

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..++.++|+.+|  ++ |.|+.+||..++..       .....++++.+|+.+|.|++|.|+.+||...+
T Consensus         9 ~~e~~~~~~~~d--~~-g~i~~~ef~~~~~~-------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   68 (110)
T 1pva_A            9 ADDIKKALDAVK--AE-GSFNHKKFFALVGL-------KAMSANDVKKVFKAIDADASGFIEEEELKFVL   68 (110)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTC-------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHHhcC--CC-CcCcHHHHHHHHcc-------CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            457888899888  88 99999999988742       23567889999999999999999999998544

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=97.62  E-value=1.1e-05  Score=72.43  Aligned_cols=60  Identities=15%  Similarity=0.210  Sum_probs=51.7

Q ss_pred             hHHHhcccccc-CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          303 TETDAFAFLKA-DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       303 ~~~~~F~~~D~-~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .+...|..||. |+| |.|+..||..++..+.       ..+.-++.+++..|.|+||.|+++||...+
T Consensus       156 ~v~w~F~~lD~~n~d-g~l~~~El~~i~~~l~-------~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf  216 (229)
T 1nub_A          156 PVHWQFGQLDQHPID-GYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGCF  216 (229)
T ss_dssp             HHHHHHHHHTTTTCS-SEECTTTTGGGGSTTS-------TTGGGHHHHHHHHCTTCSSCEEHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCC-CCCCHHHHHHHHHHHh-------hHHHHHHHHHHHcCCCCCCcCCHHHHHHHh
Confidence            57778999999 899 9999999999876544       345568999999999999999999999644

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=97.49  E-value=0.00021  Score=76.10  Aligned_cols=81  Identities=11%  Similarity=0.096  Sum_probs=65.9

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCC-------CCCCHHHHHHHHHHhcCC---
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHK-------HGLADEETKDLWVQADID---  356 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~-------~~~~~~~~~~~~~~~d~~---  356 (445)
                      +.|...+..+.  ...+++++|+.||.+++ |.|+.+||+..|+..+  ++.       ..++.+++++|++.++.+   
T Consensus       210 eEF~~f~~~l~--~R~EI~eiF~~ydsd~~-g~mT~~EL~~FL~~~Q--~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~  284 (885)
T 3ohm_B          210 EIFERFLNKLC--LRPDIDKILLEIGAKGK-PYLTLEQLMDFINQKQ--RDPRLNEVLYPPLRPSQARLLIEKYEPNQQF  284 (885)
T ss_dssp             HHHHHHHHHHS--CCHHHHHHHHHTTCCST-TCEEHHHHHHHHHHHS--SCTTSCTTTSCCCCHHHHHHHHHHHCCCHHH
T ss_pred             HHHHHHHHhcC--CHHHHHHHHHHHhcCCC-CccCHHHHHHHHHHhc--CcccccccccccCCHHHHHHHHHHhcCChhh
Confidence            45555555333  34689999999999999 9999999999999985  121       036889999999999999   


Q ss_pred             -CCceeeHHHHHHHHhc
Q 013328          357 -GNGVVDYKEFQQRIWK  372 (445)
Q Consensus       357 -~~g~i~~~eF~~~~~~  372 (445)
                       ++|.|++++|.++|..
T Consensus       285 ~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          285 LERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             HHTTEECHHHHHHHHTS
T ss_pred             hccCccchhhhhhhccC
Confidence             7899999999988865

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=97.47  E-value=6.7e-05  Score=58.68  Aligned_cols=85  Identities=7%  Similarity=-0.058  Sum_probs=61.5

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc--------cCccccccccCCccccccccccccccc---Ceeeeccc
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK--------TTWSDQRNDLNDEDEDGFVKSSLEQTI---GFSVKNAV  407 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~  407 (445)
                      ..++++++++++..+|  ++|.|+|+||+..+..        ...+...|.+..|.++..|.......+   |..++   
T Consensus         4 ~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---   78 (108)
T 2kyc_A            4 DILSPSDIAAALRDCQ--APDSFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLT---   78 (108)
T ss_dssp             SSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCTTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCC---
T ss_pred             ccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCC---
Confidence            6689999999999998  8999999999976632        224566677888888888876666666   43333   


Q ss_pred             cCCcccccCCCCCCCCCCCCcceeE
Q 013328          408 LFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                        ..++..  ....+|.+.+|.|+.
T Consensus        79 --~~~~~~--~~~~~D~d~dg~i~~   99 (108)
T 2kyc_A           79 --ASETKT--FLAAADHDGDGKIGA   99 (108)
T ss_dssp             --TTTTHH--HHTTTCCSSSSCCCS
T ss_pred             --HHHHHH--HHHHhCCCCCCcCCH
Confidence              223333  446788899998864

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=97.26  E-value=0.00027  Score=76.48  Aligned_cols=54  Identities=20%  Similarity=0.337  Sum_probs=26.5

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC-----CCceeeHHHHHHHH
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID-----GNGVVDYKEFQQRI  370 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~  370 (445)
                      .+..+|+.| .|++ |+|+.+||+.+|            ++++++.++..+|.+     +||.|+|+||+..|
T Consensus       799 ~l~~aF~~~-~d~~-G~Is~~El~~~l------------~~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~  857 (863)
T 1sjj_A          799 QVMASFKIL-AGDK-NYITVDELRREL------------PPDQAEYCIARMAPYNGRDAVPGALDYMSFSTAL  857 (863)
T ss_dssp             HHHHHHHGG-GTSS-SEEEHHHHHHHS------------CHHHHHHHHHHSEECCSSCCCTTEEESHHHHHHH
T ss_pred             HHHHHHHHH-hCCC-CcCcHHHHHHHC------------CHHHHHHHHHHcchhcCCCCCCCceeHHHHHHHH
Confidence            444455555 4555 555555555442            134455555555543     35555555555433

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=97.04  E-value=0.0023  Score=50.58  Aligned_cols=66  Identities=15%  Similarity=0.198  Sum_probs=50.2

Q ss_pred             ccchHHHhcccc-c-----cCCCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCC--------CceeeHH
Q 013328          300 ASLTETDAFAFL-K-----ADNDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDG--------NGVVDYK  364 (445)
Q Consensus       300 ~~~~~~~~F~~~-D-----~~~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~--------~g~i~~~  364 (445)
                      ...+|+.+++.| |     ...+ |.|+.++|+.++...-    +.. .+.+-++.++..||.|+        +|.|+|.
T Consensus        23 s~~elk~~y~~F~~g~~~k~cp~-G~i~~e~F~~i~~~ff----p~~~~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fk   97 (118)
T 1tuz_A           23 STKKVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYL----EVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLN   97 (118)
T ss_dssp             CCCCHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHT----TCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHH
T ss_pred             CHHHHHHHHHHHccccccccCCC-CCCCHHHHHHHHHHhC----cCCCCHHHHHHHHHHHHhcccccccccCCCCeEeHH
Confidence            344566665555 3     3457 9999999999999873    132 56777888999999985        8999999


Q ss_pred             HHHHHH
Q 013328          365 EFQQRI  370 (445)
Q Consensus       365 eF~~~~  370 (445)
                      ||+-++
T Consensus        98 efi~~L  103 (118)
T 1tuz_A           98 DVSCYF  103 (118)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999666

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=96.99  E-value=0.00057  Score=72.80  Aligned_cols=77  Identities=13%  Similarity=0.236  Sum_probs=48.3

Q ss_pred             cchhHHHHHHHHHhh---hhccchHHHhccc--cccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC-
Q 013328          283 ASWSEAVFGMFKCLL---RRASLTETDAFAF--LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID-  356 (445)
Q Consensus       283 ~s~~~~v~~~~~~~~---~~~~~~~~~~F~~--~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~-  356 (445)
                      ..|...+..++....   ......++++|..  +|+|++ |+|+.+||..+|..          ...+++.+++++|.+ 
T Consensus       128 ~~W~~gL~~L~~~~~~~~~~~~~~L~kaf~~~~~D~n~d-GkIs~kel~~~l~~----------~~~~v~~l~~~~d~~~  196 (885)
T 3ohm_B          128 KVWSEELFKLAMNILAQNASRNTFLRKAYTKLKLQVNQD-GRIPVKNILKMFSA----------DKKRVETALESCGLKF  196 (885)
T ss_dssp             HHHHHHHHHHHHCHHHHTCCHHHHHHHHHHHHHHSCCTT-SCEEHHHHHHTTGG----------GHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHhhhhhcccCHHHHHHHHHHHhcCccCCC-CccCHHHHHHHHhc----------CHHHHHHHHHHhCCCc
Confidence            346666655555442   1223456777776  788888 88888777776542          245667777777765 


Q ss_pred             ------CCceeeHHHHHHHH
Q 013328          357 ------GNGVVDYKEFQQRI  370 (445)
Q Consensus       357 ------~~g~i~~~eF~~~~  370 (445)
                            ++|.|+|+||+..+
T Consensus       197 ~~~d~~~~g~i~feEF~~f~  216 (885)
T 3ohm_B          197 NRSESIRPDEFSLEIFERFL  216 (885)
T ss_dssp             STTCEECGGGCCHHHHHHHH
T ss_pred             cccccCCCCcCCHHHHHHHH
Confidence                  66677777776544

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=96.97  E-value=0.00093  Score=70.69  Aligned_cols=81  Identities=15%  Similarity=0.198  Sum_probs=63.9

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC-------CCCHHHHHHHHHHhcC--C-
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-------GLADEETKDLWVQADI--D-  356 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-------~~~~~~~~~~~~~~d~--~-  356 (445)
                      +.|...+..+.  ...+++++|+.||.|++ |.|+. ||+..|+..+  ++..       ..+.+++++|++.++.  + 
T Consensus       216 eEF~~f~~~L~--~R~EI~eiF~~y~~dg~-~~mT~-eL~~FL~~~Q--~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~  289 (816)
T 3qr0_A          216 DTFFKFYLALL--ERSEIEGIFKELSKNKG-NITTV-MFRDFLNDMQ--RHPSLHKTLFPLYTDAQCEALINDYESAVNK  289 (816)
T ss_dssp             HHHHHHHHHHC--CCTHHHHHHHHHTTTSS-SEEHH-HHHHHHHHTS--SCTTSCTTTSCCCCHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHhcC--CHHHHHHHHHHHccCCC-CcccH-HHHHHHHHhC--CccccccccccccCHHHHHHHHHHhccccch
Confidence            45555555432  34689999999999999 99999 9999999986  2210       1678999999999887  5 


Q ss_pred             ---CCceeeHHHHHHHHhcc
Q 013328          357 ---GNGVVDYKEFQQRIWKT  373 (445)
Q Consensus       357 ---~~g~i~~~eF~~~~~~~  373 (445)
                         ++|.|++++|..+|...
T Consensus       290 ~~~~~g~LsldgF~~yL~S~  309 (816)
T 3qr0_A          290 KGKKKGQLTKEGLLYFLMCE  309 (816)
T ss_dssp             GGCBTTEECHHHHHHHHHSG
T ss_pred             hhhccCCccHHHHHHHhhcc
Confidence               78999999999988653

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=96.70  E-value=0.0006  Score=72.15  Aligned_cols=81  Identities=15%  Similarity=0.104  Sum_probs=55.6

Q ss_pred             ccchhHHHHHHHHHhhh---hccchHHHhc--cccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh---
Q 013328          282 KASWSEAVFGMFKCLLR---RASLTETDAF--AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA---  353 (445)
Q Consensus       282 ~~s~~~~v~~~~~~~~~---~~~~~~~~~F--~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~---  353 (445)
                      ...|...+..++.....   .....+++.+  ..||+|++ |+|+.+||..+|...+       ....++++++++.   
T Consensus       130 A~~W~~gL~~L~~~~~~~~~~~~~~~~~~~~~~~fd~n~d-G~Is~kEl~~~l~~~~-------~~~~el~~~~~~~~~~  201 (816)
T 3qr0_A          130 AKKWSEEVFSYAYNLLSLNKNQLGEWEKLYFRLTTVEMEK-NKIPVKAIQKCLSKDK-------DDRARISKALEKIGWP  201 (816)
T ss_dssp             HHHHHHHHHHHHTCHHHHTCCHHHHHHHHHHHHHHTSCCS-SEEEHHHHHHHHCSCH-------HHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhccCCCC-CCCCHHHHHHHHHhcC-------ChHHHHHHHHHHhccc
Confidence            34577777665544331   1111122222  35799999 9999999999887644       2245789999988   


Q ss_pred             ----cCCCCceeeHHHHHHHH
Q 013328          354 ----DIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       354 ----d~~~~g~i~~~eF~~~~  370 (445)
                          |.+++|.|+|+||+..+
T Consensus       202 ~~k~D~~~~g~L~FeEF~~f~  222 (816)
T 3qr0_A          202 SGKNDAIDLKAFDFDTFFKFY  222 (816)
T ss_dssp             CSTTCEEETTTCCHHHHHHHH
T ss_pred             ccccccCCCCcCCHHHHHHHH
Confidence                67788999999998655

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=96.10  E-value=0.00026  Score=57.06  Aligned_cols=32  Identities=9%  Similarity=0.073  Sum_probs=0.0

Q ss_pred             HHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          328 ALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       328 ~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      +|+.+|     .+++++++++++..+    +|.|+|+||+.
T Consensus         1 ~lr~lG-----~~~t~~ei~~~~~~~----~g~i~f~EF~~   32 (123)
T 2kld_A            1 GSTAIG-----INDTYSEVKSDLAQQ----KAEMELSDLIR   32 (123)
T ss_dssp             -----------------------------------------
T ss_pred             ChhhcC-----CCCCHHHHHHHHHHc----CCCccHHHHHh
Confidence            367788     779999999999877    78999999997

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=95.84  E-value=0.0047  Score=49.28  Aligned_cols=58  Identities=14%  Similarity=0.252  Sum_probs=38.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCC------C-----CCCCCHHHHHHHHHHhcCCCC
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG------H-----KHGLADEETKDLWVQADIDGN  358 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~------~-----~~~~~~~~~~~~~~~~d~~~~  358 (445)
                      ....+.++|+.+|.|+| |.|+.+||..+|..+-..+      +     ...-++..++++++++|.|||
T Consensus        53 ~~~~v~~~i~~~D~d~D-G~IdF~EF~~lm~~l~~~~he~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           53 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGLTIACNDYFVVHMKQENLYFQGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             CTTHHHHHHHHHCTTCS-SCCCHHHHHHHHHHHHHHHHHHHTTSCC---------CCHHHHHHHCCC---
T ss_pred             CHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence            45788999999999999 9999999998887642100      0     011123348899999999876

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=95.82  E-value=0.0023  Score=47.40  Aligned_cols=50  Identities=16%  Similarity=0.251  Sum_probs=35.7

Q ss_pred             CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          314 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       314 ~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      |++ |.|+.+|  .++. ..+    .....++++++|..+|.|++|.|+.+||...+.
T Consensus         1 ~~~-G~i~~~e--~~~~-~~l----~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~   50 (87)
T 1s6j_A            1 HSS-GHIDDDD--KHMA-ERL----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLK   50 (87)
T ss_dssp             CCS-SSSSSHH--HHSS-SSS----CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             CCC-CccCccH--HHHH-HHC----CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            567 9999999  2221 111    111234588999999999999999999996653

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=95.39  E-value=0.025  Score=57.50  Aligned_cols=65  Identities=18%  Similarity=0.242  Sum_probs=57.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+.++|..+|. .+ |+|+-++.+..|.+-|       ++.+.+.+|..-.|.|+||.++.+||+-+|+-
T Consensus       455 ~~~~~y~~~F~~~~~-~~-g~i~g~~a~~~~~~s~-------Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L  519 (550)
T 2qpt_A          455 KDKSKYDEIFYNLAP-AD-GKLSGSKAKTWMVGTK-------LPNSVLGRIWKLSDVDRDGMLDDEEFALASHL  519 (550)
T ss_dssp             TTHHHHHHHHHHTCC-SS-SEECHHHHHHHHHHTT-------CCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CC-CeecHHHHHHHHHHcC-------CCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence            355678889999994 57 9999999999999877       88999999999999999999999999866644

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=94.80  E-value=0.015  Score=44.69  Aligned_cols=28  Identities=29%  Similarity=0.488  Sum_probs=24.5

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++|+.+|.|++|.|+.+||...+.
T Consensus        36 ~el~~~F~~~D~d~~G~I~~~El~~~l~   63 (100)
T 2lv7_A           36 EEIREAFKVFDRDGNGFISKQELGTAMR   63 (100)
T ss_dssp             HHHHHHHHHTCSSCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence            4678889999999999999999986663

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=94.69  E-value=0.017  Score=47.76  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=35.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCcee
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV  361 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i  361 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++...          ..++..+|+.+|.|++|..
T Consensus        84 ~~~e~~~l~~~~D~d~d-g~I~~~eF~~~~~~~----------~~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A           84 THLEMKKMISEVTGGVS-DTISYRDFVNMMLGK----------RSAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             CHHHHHHHHHHHHTTSC-SSBCHHHHHHHHHSS----------SCCHHHHHHC---------
T ss_pred             CHHHHHHHHHHHCCCCC-CcEeHHHHHHHHHHh----------HHHHHHHHHHHcCCCCCCC
Confidence            34678889999999999 999999999988653          2358999999999999873

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=94.10  E-value=0.037  Score=38.09  Aligned_cols=31  Identities=16%  Similarity=0.129  Sum_probs=27.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      ...++..+|+.+|.|++ |.|+.+||..++..
T Consensus        34 ~~~~~~~~~~~~D~~~~-g~i~~~ef~~~~~~   64 (66)
T 3li6_A           34 NEQLLQLIFKSIDADGN-GEIDQNEFAKFYGS   64 (66)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSCCHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHh
Confidence            34678899999999999 99999999998764

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=93.56  E-value=0.019  Score=47.38  Aligned_cols=51  Identities=8%  Similarity=0.084  Sum_probs=38.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCcee
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV  361 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i  361 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++...          .+++..+|+.+|.+++|..
T Consensus        82 ~~~~~~~l~~~~D~d~d-g~I~~~eF~~~~~~~----------~~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A           82 THLELKRLIREVSSGSE-ETFSYSDFLRMMLGK----------RSAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             CHHHHHHHHHHHCSSCT-TEECHHHHHHHHCSS----------GGGGGGGGGGCCCC-----
T ss_pred             CHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHh----------HHHHHHHHHHHccCCCCCC
Confidence            44678899999999999 999999999887431          4568889999999999874

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=93.54  E-value=0.12  Score=38.83  Aligned_cols=33  Identities=24%  Similarity=0.400  Sum_probs=28.8

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...+.++++++|+.+|.|++|.|+.+||...+.
T Consensus        24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~   56 (94)
T 2kz2_A           24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMT   56 (94)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHH
Confidence            446788999999999999999999999986653

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=93.40  E-value=0.064  Score=39.79  Aligned_cols=32  Identities=28%  Similarity=0.343  Sum_probs=26.8

Q ss_pred             CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          340 GLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       340 ~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+++..+|..+|.|++|.|+.+||...+.
T Consensus         5 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   36 (92)
T 2kn2_A            5 TDAEEELKEAFKVFDKDQNGYISASELRHVMI   36 (92)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH
Confidence            33456789999999999999999999986653

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=93.37  E-value=0.044  Score=39.76  Aligned_cols=30  Identities=23%  Similarity=0.327  Sum_probs=26.1

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++++.+|..+|.|++|.|+.+||...+.
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   34 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGDGYVTALELQTFMV   34 (83)
T ss_dssp             SCTHHHHHHHHHSSSCSSSCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            345789999999999999999999987664

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=93.36  E-value=0.063  Score=37.41  Aligned_cols=30  Identities=20%  Similarity=0.343  Sum_probs=26.6

Q ss_pred             CCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          341 LADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       341 ~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .+.++++.+|..+|.|++|.|+.+||...+
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   32 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAM   32 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHG
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            457789999999999999999999998655

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=93.05  E-value=0.075  Score=40.05  Aligned_cols=49  Identities=14%  Similarity=0.081  Sum_probs=33.4

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHhccCc--------cccccccCCcccccccc
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIWKTTW--------SDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--------~~~~~~~~~~~~~~~~~  392 (445)
                      ++++++|+.+|.|+||.|+.+|+...+.....        ....|.+.+|.++-.|.
T Consensus        10 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF   66 (95)
T 1c07_A           10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF   66 (95)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHH
Confidence            46788999999999999999999866643211        12334455565655553

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=93.02  E-value=0.082  Score=36.25  Aligned_cols=32  Identities=13%  Similarity=0.183  Sum_probs=27.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      ....++..+|+.+|.|++ |.|+.+||..++..
T Consensus        34 ~~~~~~~~~~~~~D~~~d-g~i~~~ef~~~~~~   65 (67)
T 1tiz_A           34 FTQEDIVKFFEEIDVDGN-GELNADEFTSCIEK   65 (67)
T ss_dssp             SCHHHHHHHHHHHCCSSS-SEECHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHH
Confidence            344678899999999999 99999999998864

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=92.99  E-value=0.051  Score=42.54  Aligned_cols=50  Identities=14%  Similarity=0.245  Sum_probs=30.9

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceee
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD  362 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  362 (445)
                      ..++.++|+.+|.|++ |.|+.+||..++..+.          ......+...| +++|.=.
T Consensus        55 ~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~~----------~~~~~~f~~~~-~~~g~~~  104 (113)
T 1xk4_C           55 EKVIEHIMEDLDTNAD-KQLSFEEFIMLMARLT----------WASHEKMHEGD-EGPGHHH  104 (113)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH----------HHHHC--------------
T ss_pred             HHHHHHHHHHhCCCCC-CCEeHHHHHHHHHHHH----------HHHHHHHhhCC-CCCcccc
Confidence            4678899999999999 9999999999987653          34566777777 7777543

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=92.66  E-value=0.081  Score=37.77  Aligned_cols=29  Identities=14%  Similarity=0.462  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +++++.++..+|.|++|.|+.+||...+.
T Consensus         2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~   30 (78)
T 1k9u_A            2 ADDMERIFKRFDTNGDGKISLSELTDALR   30 (78)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            35789999999999999999999986653

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=92.65  E-value=0.12  Score=39.37  Aligned_cols=46  Identities=9%  Similarity=0.002  Sum_probs=35.9

Q ss_pred             cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          319 YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       319 ~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++.+++...|...-      ....++++.+|..+|.|++|.|+.+||...+
T Consensus         5 ~~~~~~~~~~l~~~~------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   50 (105)
T 1wlz_A            5 ATADRDILARLHKAV------TSHYHAITQEFENFDTMKTNTISREEFRAIC   50 (105)
T ss_dssp             TTCCHHHHHHHHHHH------HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             chhHHHHHHHHHHHH------HchHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            456677777666542      1346789999999999999999999999666

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=92.39  E-value=0.14  Score=36.25  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++++.+|..+|.|++|.|+.+||...+.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~   34 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMR   34 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            34678899999999999999999996653

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=92.38  E-value=0.032  Score=43.57  Aligned_cols=29  Identities=7%  Similarity=-0.040  Sum_probs=25.3

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..++++++|+.+|.|+||.|+.+|+...+
T Consensus        20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l   48 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPSSFISGSVAKNFF   48 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHC
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHH
Confidence            35678899999999999999999998655

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=92.29  E-value=0.14  Score=38.07  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=24.4

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++.+|+.+|.|++|.|+.+||...+.
T Consensus        27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~   54 (91)
T 2pmy_A           27 ARLRSVFAACDANRSGRLEREEFRALCT   54 (91)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            4578899999999999999999996653

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=91.95  E-value=0.17  Score=36.81  Aligned_cols=29  Identities=14%  Similarity=0.385  Sum_probs=24.8

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ++++.++..+|.|++|.|+.+||...+..
T Consensus        11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~   39 (86)
T 2opo_A           11 ADRERIFKRFDTNGDGKISSSELGDALKT   39 (86)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCCcCHHHHHHHHHH
Confidence            45788899999999999999999966643

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=91.79  E-value=0.18  Score=35.48  Aligned_cols=30  Identities=17%  Similarity=0.235  Sum_probs=26.3

Q ss_pred             CHHHHHHHHHHh-cCCCC-ceeeHHHHHHHHh
Q 013328          342 ADEETKDLWVQA-DIDGN-GVVDYKEFQQRIW  371 (445)
Q Consensus       342 ~~~~~~~~~~~~-d~~~~-g~i~~~eF~~~~~  371 (445)
                      +.++++.+|..+ |.|++ |.|+.+||...+.
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~   34 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQ   34 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHH
Confidence            467899999999 99999 9999999986553

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=91.37  E-value=0.13  Score=37.04  Aligned_cols=30  Identities=27%  Similarity=0.511  Sum_probs=25.2

Q ss_pred             CCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          340 GLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       340 ~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..+.++++ +|..+|.|++|.|+.+||...+
T Consensus         5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l   34 (81)
T 1c7v_A            5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIM   34 (81)
T ss_dssp             --CHHHHH-HHHHHSCSGGGEECHHHHHHHS
T ss_pred             ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHH
Confidence            34577899 9999999999999999998654

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=91.21  E-value=0.2  Score=37.39  Aligned_cols=33  Identities=9%  Similarity=0.175  Sum_probs=28.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 ~~~~v~~~~~~~D~d~d-G~I~f~EF~~~~~~l~   82 (92)
T 3rm1_A           50 EQEVVDKVMETLDSNGD-GECDFQEFMAFVAMIT   82 (92)
T ss_dssp             SHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            34678999999999999 9999999999887653

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=91.16  E-value=0.085  Score=40.18  Aligned_cols=50  Identities=10%  Similarity=-0.067  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHhccCc--------cccccccCCcccccccc
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW--------SDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--------~~~~~~~~~~~~~~~~~  392 (445)
                      .++++++|+.+|.|+||.|+.+|+...+.....        ....+.+.+|.++-.|.
T Consensus        10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF   67 (99)
T 1qjt_A           10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEF   67 (99)
T ss_dssp             CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHH
Confidence            457899999999999999999999876643221        13335555666665553

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=90.76  E-value=0.14  Score=38.43  Aligned_cols=33  Identities=12%  Similarity=0.314  Sum_probs=28.9

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++++.+|.|+| |.|+.+||..++..+.
T Consensus        51 ~~~ev~~~i~~~D~d~D-G~Idf~EF~~~~~~~~   83 (93)
T 4eto_A           51 DEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCIA   83 (93)
T ss_dssp             CHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHHH
Confidence            35678999999999999 9999999999887753

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=90.52  E-value=0.15  Score=39.17  Aligned_cols=33  Identities=12%  Similarity=0.340  Sum_probs=29.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        54 ~~~ev~~~i~~~D~dgD-G~Idf~EF~~~m~~~~   86 (104)
T 3zwh_A           54 DEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSSIA   86 (104)
T ss_dssp             CHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            35679999999999999 9999999999887754

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=90.40  E-value=0.16  Score=38.71  Aligned_cols=32  Identities=13%  Similarity=0.272  Sum_probs=29.0

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ..++.++|+.+|.|++ |.|+.+||..+|..+.
T Consensus        54 ~~ev~~~i~~~D~d~D-G~Idf~EF~~~m~~~~   85 (100)
T 3nxa_A           54 RKAADKLIQNLDANHD-GRISFDEYWTLIGGIT   85 (100)
T ss_dssp             HHHHHHHHHHSCCCSS-CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHHH
Confidence            4578999999999999 9999999999998765

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=90.34  E-value=0.28  Score=36.00  Aligned_cols=28  Identities=29%  Similarity=0.337  Sum_probs=24.1

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++..+|..+|.|++|.|+.+||...+.
T Consensus        20 ~~l~~~F~~~D~d~~G~i~~~el~~~l~   47 (90)
T 1avs_A           20 AEFKAAFDMFDADGGGDISTKELGTVMR   47 (90)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4578889999999999999999996553

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=90.31  E-value=0.24  Score=38.43  Aligned_cols=28  Identities=11%  Similarity=0.086  Sum_probs=24.0

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++|+.+|.|+||.|+.+||...+.
T Consensus        14 ~~l~~~F~~~D~d~dG~I~~~El~~~l~   41 (111)
T 2kgr_A           14 LKYRQLFNSHDKTMSGHLTGPQARTILM   41 (111)
T ss_dssp             HHHHHHHHTTSCSSCCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4567789999999999999999997664

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=89.92  E-value=0.28  Score=35.59  Aligned_cols=29  Identities=7%  Similarity=0.123  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++++.+|..+|.|++|.|+.+||...+.
T Consensus        13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~   41 (86)
T 1j7q_A           13 KDECMKIFDIFDRNAENIAPVSDTMDMLT   41 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34678899999999999999999986553

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=89.84  E-value=0.24  Score=36.89  Aligned_cols=28  Identities=11%  Similarity=0.001  Sum_probs=23.6

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++|+.+|.|+||.|+.+|+...+.
T Consensus         9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~   36 (92)
T 1fi6_A            9 QYYVNQFKTIQPDLNGFIPGSAAKEFFT   36 (92)
T ss_dssp             HHHHHHHTTTCCSTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            3467788999999999999999987663

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=89.75  E-value=0.15  Score=39.01  Aligned_cols=32  Identities=13%  Similarity=0.235  Sum_probs=28.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|+| |.|+.+||..++..+
T Consensus        51 ~~~ev~~~i~~~D~dgD-G~Idf~EF~~~~~~~   82 (101)
T 3nso_A           51 RECDYNKFMSVLDTNKD-CEVDFVEYVRSLACL   82 (101)
T ss_dssp             CHHHHHHHHHHHHHCCC-SCEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHH
Confidence            34678999999999999 999999999888764

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=89.46  E-value=0.33  Score=34.25  Aligned_cols=31  Identities=19%  Similarity=0.278  Sum_probs=26.7

Q ss_pred             CCHHHHHHHHHHhcC-CCCc-eeeHHHHHHHHh
Q 013328          341 LADEETKDLWVQADI-DGNG-VVDYKEFQQRIW  371 (445)
Q Consensus       341 ~~~~~~~~~~~~~d~-~~~g-~i~~~eF~~~~~  371 (445)
                      -..++++.+|..+|. |++| .|+.+||...+.
T Consensus         4 ~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~   36 (78)
T 1cb1_A            4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQ   36 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCCcCEeCHHHHHHHHH
Confidence            346789999999999 9999 999999996553

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=89.36  E-value=0.21  Score=38.07  Aligned_cols=30  Identities=23%  Similarity=0.415  Sum_probs=25.3

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...+++.+|..+|.|+||.|+.+||...+.
T Consensus        18 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~   47 (103)
T 1snl_A           18 NRFNPKTFFILHDINSDGVLDEQELEALFT   47 (103)
T ss_dssp             CCCCHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             ccCCHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence            344689999999999999999999986554

>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=88.46  E-value=1.5  Score=37.04  Aligned_cols=70  Identities=9%  Similarity=0.218  Sum_probs=53.6

Q ss_pred             ccchHHHhccccccCCCC----CcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDG----DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~----G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+|..+|..|-.-++.    ..|+...+..+|+..+|.. ...++..+++-+|..+-..+..+|+|++|++.|
T Consensus         6 ~~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liD-gk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL   79 (184)
T 2jrf_A            6 DIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD-GKSVTGTDVDIVFSKVKGKSARVINYEEFKKAL   79 (184)
T ss_dssp             SCSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCC-SSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCcc-CCCCChhhcchhhheeccCcceeecHHHHHHHH
Confidence            345677788777653330    2599999999999987631 134788999999999987778899999999766

>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11

Probab=88.45  E-value=1.4  Score=35.99  Aligned_cols=69  Identities=9%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             chHHHhccccccCCCC----CcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDG----DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~----G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .+|..+|..|-.-|+.    ..++...+..+|+..++.. ...++..+++-+|..+-..+..+|+|++|++.|-
T Consensus        15 ~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lid-gk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~   87 (151)
T 1wlm_A           15 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD-GKAVTGTDVDIVFSKVKAKSARVINYEEFKKALE   87 (151)
T ss_dssp             CSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCC-SSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCc-CCCCChhhcceehheeccCccceecHHHHHHHHH
Confidence            4577777766553330    2599999999999987631 1347889999999999877788999999997553

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=88.42  E-value=0.48  Score=35.16  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=28.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        48 ~~~~i~~~~~~~D~d~d-G~I~f~EF~~~~~~~~   80 (92)
T 2kax_A           48 KESSIDDLMKSLDKNSD-QEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             CCTTHHHHHHHHTTTCS-SEEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            44678999999999999 9999999999987653

>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A

Probab=88.40  E-value=0.4  Score=35.39  Aligned_cols=51  Identities=10%  Similarity=0.120  Sum_probs=35.8

Q ss_pred             ccccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHH
Q 013328          310 FLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       310 ~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~  367 (445)
                      .=|.|+| |.|+..++..+.+-+ |.    ......  +.-+...|.|+||.|+-.++.
T Consensus        22 ~GDvNgD-G~Vn~~D~~llk~yllg~----~~~~~~--~~~~~aADvNgDG~In~~D~~   73 (88)
T 4fl4_A           22 MGDVNDD-GKVNSTDLTLLKRYVLKA----VSTLPS--SKAEKNADVNRDGRVNSSDVT   73 (88)
T ss_dssp             TTCTTCS-SCCSHHHHHHHHHHHHTS----SCCCSS--HHHHHHHCTTCSSCCSHHHHH
T ss_pred             cccCCCC-CcCCHHHHHHHHHHHcCC----CCCCch--hhhhhhccccCCCCcCHHHHH
Confidence            3489999 999999987776655 31    112111  122457899999999999886

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=87.96  E-value=0.31  Score=36.64  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=28.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        47 ~~~ev~~l~~~~D~d~d-G~I~f~EF~~~~~~~~   79 (96)
T 1a4p_A           47 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGLT   79 (96)
T ss_dssp             CTTHHHHHHHHHCTTSS-SCBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34678999999999999 9999999999887643

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=87.78  E-value=0.48  Score=34.85  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=28.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 ~~~~~~~~~~~~D~d~d-g~i~~~eF~~~~~~~~   82 (93)
T 1k2h_A           50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAALT   82 (93)
T ss_dssp             CHHHHHHHHHHHHHCTT-SCCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            44678899999999999 9999999999887653

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=87.59  E-value=0.49  Score=34.50  Aligned_cols=33  Identities=12%  Similarity=0.202  Sum_probs=28.5

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        49 ~~~~~~~~~~~~D~~~d-g~i~~~eF~~~~~~~~   81 (90)
T 1k8u_A           49 QDAEIARLMEDLDRNKD-QEVNFQEYVTFLGALA   81 (90)
T ss_dssp             TSHHHHHHHHHHHHTTT-CEEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHHH
Confidence            44678899999999999 9999999999887653

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=87.57  E-value=0.27  Score=38.64  Aligned_cols=48  Identities=17%  Similarity=0.286  Sum_probs=38.9

Q ss_pred             CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhc------CCCCceeeHHHHHHHH
Q 013328          315 NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD------IDGNGVVDYKEFQQRI  370 (445)
Q Consensus       315 ~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d------~~~~g~i~~~eF~~~~  370 (445)
                      .. +.++.++|.++-+...       ++..||+++.+.|.      ...+|.|++++|...+
T Consensus         4 ~~-s~lspe~l~~L~~~t~-------fs~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~   57 (118)
T 1tuz_A            4 ER-GLISPSDFAQLQKYME-------YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFL   57 (118)
T ss_dssp             CC-SCSCHHHHHHHHHHHH-------HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHH
T ss_pred             cc-CcCCHHHHHHHHHHcc-------cCHHHHHHHHHHHccccccccCCCCCCCHHHHHHHH
Confidence            44 7899999999888766       67788999999993      3458999999998654

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=87.50  E-value=0.33  Score=36.44  Aligned_cols=32  Identities=16%  Similarity=0.198  Sum_probs=27.1

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++..+
T Consensus        50 ~~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~   81 (95)
T 1j55_A           50 DKDAVDKLLKDLDANGD-AQVDFSEFIVFVAAI   81 (95)
T ss_dssp             --CHHHHHHHHHCSSSS-SSEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHH
Confidence            34578999999999999 999999999988764

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=87.39  E-value=0.38  Score=36.10  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=27.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++..+
T Consensus        53 ~~~~v~~~~~~~D~d~d-G~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           53 DKAVIDEIFQGLDANQD-EQVDFQEFISLVAIA   84 (95)
T ss_dssp             CHHHHHHHHTTSSSSTT-SEEEHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            34678999999999999 999999999988654

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=87.37  E-value=0.4  Score=36.61  Aligned_cols=28  Identities=25%  Similarity=0.489  Sum_probs=24.2

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++.+|..+|.|++|.|+.+||...+.
T Consensus        32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   59 (107)
T 2d58_A           32 EGFKEKYMEFDLNGNGDIDIMSLKRMLE   59 (107)
T ss_dssp             HHHHHHHTTSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4678889999999999999999996553

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=87.17  E-value=0.31  Score=39.56  Aligned_cols=49  Identities=10%  Similarity=-0.004  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHhccCc--------cccccccCCcccccccc
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW--------SDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--------~~~~~~~~~~~~~~~~~  392 (445)
                      .++++++|+.+| |+||.|+.+|+...+.....        ....|.+.+|.++-.|.
T Consensus        50 ~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF  106 (139)
T 2jq6_A           50 KPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEF  106 (139)
T ss_dssp             HHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHH
T ss_pred             HHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            567899999999 99999999999876644221        13345566666665553

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=87.08  E-value=0.37  Score=36.07  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=28.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+..+|+.+|.|++ |.|+.+||..++..+.
T Consensus        54 ~~~~~~~l~~~~D~~~d-g~I~~~EF~~~~~~~~   86 (99)
T 1qls_A           54 DPGVLDRMMKKLDLDSD-GQLDFQEFLNLIGGLA   86 (99)
T ss_dssp             CTHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34578889999999999 9999999999887654

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=86.65  E-value=0.41  Score=37.33  Aligned_cols=32  Identities=13%  Similarity=0.326  Sum_probs=27.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|++ |.|+.+||..+|...
T Consensus        63 t~~ev~~li~~~D~dgd-G~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           63 DEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCI   94 (113)
T ss_dssp             CTTHHHHHHHHHCSSSS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHH
Confidence            34678999999999999 999999999887654

>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}

Probab=86.33  E-value=0.37  Score=35.17  Aligned_cols=49  Identities=12%  Similarity=0.253  Sum_probs=35.2

Q ss_pred             ccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHH
Q 013328          312 KADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       312 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~  367 (445)
                      |.|+| |.|+..++..+.+-+ |.   ...+..   ..-+...|.|+||.|+-.+|.
T Consensus         9 DvN~D-G~Vn~~D~~llk~yllg~---~~~~~~---~~~~~~ADvngDG~In~~D~~   58 (82)
T 4dh2_B            9 DVNAD-GVVNISDYVLMKRYILRI---IADFPA---DDDMWVGDVNGDNVINDIDCN   58 (82)
T ss_dssp             CTTCS-SSCSHHHHHHHHHHHTTS---SSSCSS---SCHHHHHCSSSSSCCSHHHHH
T ss_pred             ccCCC-CcCCHHHHHHHHHHHcCC---CccCcc---ccchhheeccCCCcCCHHHHH
Confidence            88999 999999998877765 41   011111   112457899999999999986

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=86.32  E-value=0.43  Score=36.70  Aligned_cols=32  Identities=13%  Similarity=0.128  Sum_probs=27.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++++..|.|++ |.|+.+||..+|..+
T Consensus        46 ~~~el~~i~~~~D~d~d-G~id~~EF~~~m~~~   77 (106)
T 1eh2_A           46 PVDILGRVWELSDIDHD-GMLDRDEFAVAMFLV   77 (106)
T ss_dssp             CHHHHHHHHHHHCSSCS-SBCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            35678899999999999 999999999888653

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=86.28  E-value=0.37  Score=37.09  Aligned_cols=30  Identities=10%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      .++.++|+.+|.|++ |.|+.+||..++...
T Consensus        62 ~ev~~li~~~D~d~d-G~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           62 GSLDEKMKSLDVNQD-SELKFNEYWRLIGEL   91 (106)
T ss_dssp             CCHHHHHHHHCTTCS-SSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCcHHHHHHHHHHH
Confidence            678999999999999 999999999888764

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=86.24  E-value=0.32  Score=36.94  Aligned_cols=32  Identities=22%  Similarity=0.309  Sum_probs=27.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|++ |.|+.+||..+|...
T Consensus        50 ~~~ev~~l~~~~D~d~d-G~I~f~EF~~~~~~~   81 (100)
T 1psr_A           50 GTNYLADVFEKKDKNED-KKIDFSEFLSLLGDI   81 (100)
T ss_dssp             TCCGGGTHHHHHCTTCS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            34578889999999999 999999999988654

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=86.10  E-value=0.42  Score=36.22  Aligned_cols=32  Identities=13%  Similarity=0.288  Sum_probs=27.9

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ..++.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        52 ~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~~   83 (99)
T 2y5i_A           52 PMLVEKIMNDLDSNKD-NEVDFNEFVVLVAALT   83 (99)
T ss_dssp             HHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHH
Confidence            4578899999999999 9999999999887643

>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11

Probab=86.09  E-value=2.7  Score=33.09  Aligned_cols=69  Identities=7%  Similarity=0.044  Sum_probs=51.5

Q ss_pred             ccchHHHhccccccC---CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKAD---NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~---~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...++.++|..|-.-   +. ..|+...+...++..++-+ ...++..+++-+|..+ ..+..+|+|++|++.|-
T Consensus        20 ~~~~L~~~F~~Fa~fG~~~~-~~M~~k~f~K~~kD~~lid-gk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~   91 (125)
T 1pul_A           20 DDADVKKRWDAFTKFGAATA-TEMTGKNFDKWLKDAGVLD-NKAITGTMTGIAFSKV-TGPKKKATFDETKKVLA   91 (125)
T ss_dssp             CHHHHHHHHHHHHHHTCSSS-SCCCHHHHHHHHHHHTSCC-SSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhcCCCcc-ccCcHHHHHHHHHHCCCCC-CCCCCccccceeehcc-cCCcceecHHHHHHHHH
Confidence            334566666665433   33 5799999999999987531 1348889999999999 77788999999997663

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=85.52  E-value=0.67  Score=34.28  Aligned_cols=27  Identities=15%  Similarity=0.285  Sum_probs=24.1

Q ss_pred             HHHHHHHHHhcC-CCCc-eeeHHHHHHHH
Q 013328          344 EETKDLWVQADI-DGNG-VVDYKEFQQRI  370 (445)
Q Consensus       344 ~~~~~~~~~~d~-~~~g-~i~~~eF~~~~  370 (445)
                      +++..+|..+|. |++| .|+.+||...+
T Consensus        10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l   38 (93)
T 1xk4_A           10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLL   38 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCcCeECHHHHHHHH
Confidence            468899999999 9999 99999998665

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=84.99  E-value=1.9  Score=35.16  Aligned_cols=59  Identities=10%  Similarity=-0.019  Sum_probs=42.2

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      .+.++.+|+.+|.|.+ |.|+..|-...|+.-.-    ..-.. +-.   ..++. +|..|+.+|+...
T Consensus        14 ~eAi~~~H~~lDdD~d-G~Id~~Es~~Flre~~~----~~d~~-~k~---~~~h~-~D~~Isv~eLw~~   72 (150)
T 2l5y_A           14 LEALQTIHKQMDDDKD-GGIEVEESDEFIREDMK----YKDAT-NKH---SHLHR-EDKHITIEDLWKR   72 (150)
T ss_dssp             HHHHHHHHHHHSSSCS-SCBCHHHHHHHHHHHTT----TTCSH-HHH---HHHTT-TCCCBCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCC-CCCcHHHHHHHHHHHhc----ccCch-hHH---hhhcC-CCCeeeHHHHHHH
Confidence            3567888999999999 99999999999987520    11222 212   23443 4789999999854

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=80.72  E-value=2.2  Score=36.70  Aligned_cols=67  Identities=9%  Similarity=0.022  Sum_probs=50.8

Q ss_pred             chHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC
Q 013328          302 LTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT  374 (445)
Q Consensus       302 ~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~  374 (445)
                      ..+.++|..+ |.++. ..|..+.+.+.+..||     ..+.+-.+--+.-.+....-|.|+-+||+..+....
T Consensus         4 ~~l~~lF~~Y~d~~~~-d~I~~dG~~~~~~DLg-----v~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~   71 (200)
T 3tdu_A            4 KKLEQLYNRYKDPQDE-NKIGIDGIQQFCDDLA-----LDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELG   71 (200)
T ss_dssp             HHHHHHHHHHEETTEE-EEECHHHHHHHHHHHT-----CCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCC-CccCHHHHHHHHHHcC-----CChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHc
Confidence            4577788777 55545 6899999999999999     556555555555667777789999999998885533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	445
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-09
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	0.003
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	4e-09
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	1e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	5e-08
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	5e-08
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	2e-04
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-08
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	1e-07
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-07
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	4e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	7e-07
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	1e-06
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-06
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-06
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	2e-06
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-06
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-06
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	2e-06
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	7e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	8e-06
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	9e-06
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-05
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	4e-05
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	4e-05
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	5e-05
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	6e-05
d1zwxa1	293	d.151.1.3 (A:41-333) Sphingomyelin phosphodiestera	1e-04
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-04
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	3e-04
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	4e-04
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	4e-04
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	5e-04
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	6e-04
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	0.003
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	8e-04
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	0.001
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	0.002
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	0.002
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.002
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.004
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.002
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.003
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	0.003
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	0.003
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	0.004
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	0.004

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 53.4 bits (128), Expect = 1e-09
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 290 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 347
              F  L+   +++  D    F   D D   +I        L+     G      D ETK
Sbjct: 26  HKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT--DAETK 83

Query: 348 DLWVQADIDGNGVVDYKEFQQ 368
                AD DG+G +   EF+ 
Sbjct: 84  AFLKAADKDGDGKIGIDEFET 104

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 16/99 (16%)

Query: 302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
           L   D    L A        +  F   +           ++  + K ++   D D +G +
Sbjct: 6   LKADDIKKALDAVKAEGSFNHKKFFALV-------GLKAMSANDVKKVFKAIDADASGFI 58

Query: 362 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 391
           + +E +  +       +              D+D DG +
Sbjct: 59  EEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKI 97

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 51.9 bits (124), Expect = 4e-09
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 290 FGMFKCLLRRASLTETD-AFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 347
           +  F  L+     T+      F   D D   +I        L+  +  G    L D ETK
Sbjct: 26  YKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD--LNDTETK 83

Query: 348 DLWVQADIDGNGVVDYKEFQQRIWKT 373
            L    D D +G +   EF + + + 
Sbjct: 84  ALLAAGDSDHDGKIGADEFAKMVAQA 109

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 16/99 (16%)

Query: 302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
           L   D    + A  D     Y  F   +          G  D + K+++   D D +G +
Sbjct: 6   LKADDINKAISAFKDPGTFDYKRFFHLV-------GLKGKTDAQVKEVFEILDKDQSGFI 58

Query: 362 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 391
           + +E +  +   +   +  +           D D DG +
Sbjct: 59  EEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 47.5 bits (113), Expect = 5e-08
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF    A+ DG  I +  F   ++++     +  L D E ++   +AD DGNGV+D  E
Sbjct: 6   RAFKVFDANGDG-VIDFDEFKFIMQKVG----EEPLTDAEVEEAMKEADEDGNGVIDIPE 60

Query: 366 FQQRIWKT 373
           F   I K+
Sbjct: 61  FMDLIKKS 68

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.8 bits (116), Expect = 5e-08
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 290 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 347
              F      + ++ +     F   DND   Y+        L++      +  L + ETK
Sbjct: 26  PQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE--LTESETK 83

Query: 348 DLWVQADIDGNGVVDYKEFQQ 368
            L   AD DG+G +   EFQ+
Sbjct: 84  SLMDAADNDGDGKIGADEFQE 104

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
           L+  D  A L+   D D      F +             ++  + KD++   D D +G +
Sbjct: 6   LSAEDIAAALQECQDPDTFEPQKFFQTS-------GLSKMSASQVKDIFRFIDNDQSGYL 58

Query: 362 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 391
           D  E +  + K     +    +         D D DG +
Sbjct: 59  DGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 48.4 bits (115), Expect = 6e-08
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 290 FGMFKCLLRRASLTETD-AFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 347
              F   +  AS +  D   AF   D D   +I        L+  + +     L D ETK
Sbjct: 25  HKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA--LTDAETK 82

Query: 348 DLWVQADIDGNGVVDYKEFQQ 368
                 D DG+G++   EF  
Sbjct: 83  AFLADGDKDGDGMIGVDEFAA 103

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 39.9 bits (93), Expect = 6e-05
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 16/101 (15%)

Query: 300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNG 359
           A L + D  A L A +  D   +  F   +            + ++ K  +   D D +G
Sbjct: 3   AGLKDADVAAALAACSAADSFKHKEFFAKV-------GLASKSLDDVKKAFYVIDQDKSG 55

Query: 360 VVDYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 391
            ++  E +  +   + S +              D+D DG +
Sbjct: 56  FIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMI 96

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 290 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 347
              F  ++     +  D    F   D D   +I        L+  +       L+ +ETK
Sbjct: 26  HKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD--LSAKETK 83

Query: 348 DLWVQADIDGNGVVDYKEFQQRIWKT 373
            L    D DG+G +  +EF   + ++
Sbjct: 84  TLMAAGDKDGDGKIGVEEFSTLVAES 109

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 15/71 (21%), Positives = 24/71 (33%)

Query: 304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
           ET  F F K   D  Y+T       +E+      ++         +    D   +G V +
Sbjct: 9   ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGF 68

Query: 364 KEFQQRIWKTT 374
           + F   I   T
Sbjct: 69  QSFFSLIAGLT 79

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 49.2 bits (116), Expect = 4e-07
 Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 217 DWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNK 276
           + +   R      +     +++     +  D +++  +S +  R +   + F      + 
Sbjct: 168 ENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDA 227

Query: 277 YRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG 336
             +      S+ V       L    L     +AF   D  G  ++     + LE  ++  
Sbjct: 228 LFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSG-QLSKEEVQKVLEDAHI-- 284

Query: 337 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
                A ++ +  +   D+D +  + Y+EF  
Sbjct: 285 --PESARKKFEHQFSVVDVDDSKSLSYQEFVM 314

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     DN G  IT        ++L        L +EE +++  +AD + +  +D  E
Sbjct: 13  KAFRLFDDDNSG-TITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDE 66

Query: 366 FQQRIWKTT 374
           F + + KT+
Sbjct: 67  FIRIMKKTS 75

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 1e-06
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 306 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
             F  +   + D   +  S   E L +   +       +   + L    D + +  VD++
Sbjct: 13  STFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQ 72

Query: 365 EF 366
           E+
Sbjct: 73  EY 74

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F  +  DN G  IT+    + L++         L + E KDL   ADID +G +DY E
Sbjct: 27  ELFKMIDTDNSG-TITFDELKDGLKR-----VGSELMESEIKDLMDAADIDKSGTIDYGE 80

Query: 366 F 366
           F
Sbjct: 81  F 81

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 8/53 (15%), Positives = 18/53 (33%)

Query: 314 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
             D   +  +   E L++   T       + +        D + +  VD+ E+
Sbjct: 22  CGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEY 74

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 309 AFLK-ADNDGD--YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            F   +  +GD   ++     + L+    +        +    +  + D +G+G VD++E
Sbjct: 14  VFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQE 73

Query: 366 FQQRIWKTT 374
           F   +   T
Sbjct: 74  FVVLVAALT 82

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 16/85 (18%), Positives = 24/85 (28%)

Query: 310 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR 369
           F         I        L Q  + G       E  + +    D D +G + + EF++ 
Sbjct: 13  FAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 72

Query: 370 IWKTTWSDQRNDLNDEDEDGFVKSS 394
                   Q     D D  G V   
Sbjct: 73  WAVLNGWRQHFISFDTDRSGTVDPQ 97

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 313 ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 372
           A  DG  +        L Q  + G     + E  + +    D D  G + +  F++    
Sbjct: 10  AGQDG-EVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68

Query: 373 TTWSDQRNDLNDEDEDGFVKSS 394
                +     D+D  G V+  
Sbjct: 69  LNAWKENFMTVDQDGSGTVEHH 90

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEE 345
           E    +       A+      +AF   D D D  +        +  L   G    L+  E
Sbjct: 78  EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE 137

Query: 346 TKDL----WVQADIDGNGVVDYKEFQQRIWKT 373
            K L      ++DID +G ++  EFQ  I ++
Sbjct: 138 MKQLIDNILEESDIDRDGTINLSEFQHVISRS 169

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.5 bits (97), Expect = 7e-06
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 306 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
            AF  F   + D + I+       ++ L   G           ++  + D +G+G V ++
Sbjct: 9   GAFEVFAAKEGDPNQISKEELKLVMQTL---GPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65

Query: 365 EFQQRIWKTT 374
           EF   + K +
Sbjct: 66  EFLVMMKKIS 75

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.2 bits (96), Expect = 8e-06
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF     ++ G  ++       L  L        L D E  +L    ++D NG +DYK+
Sbjct: 5   KAFQVFDKESTG-KVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKK 58

Query: 366 F 366
           F
Sbjct: 59  F 59

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F     + DG  I+ S   +AL+ L        +  +E + +  + D DG+G + + E
Sbjct: 10  RIFKRFDTNGDG-KISSSELGDALKTL------GSVTPDEVRRMMAEIDTDGDGFISFDE 62

Query: 366 FQQ 368
           F  
Sbjct: 63  FTD 65

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 299 RASLTE------TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 352
           RA L+E        AF    AD  G  I+       +              EE   +  +
Sbjct: 5   RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRM-----LGQNPTKEELDAIIEE 58

Query: 353 ADIDGNGVVDYKEF 366
            D DG+G +D++EF
Sbjct: 59  VDEDGSGTIDFEEF 72

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AF     D +G YI+ +     +  L        L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 7   EAFRVFDKDGNG-YISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEE 60

Query: 366 FQQ 368
           F Q
Sbjct: 61  FVQ 63

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
             F     + DG  ++   F E                E+    + + D+DGNG ++  E
Sbjct: 5   RVFEKFDKNKDG-KLSLDEFREVALA-----FSPYFTQEDIVKFFEEIDVDGNGELNADE 58

Query: 366 FQQRIWK 372
           F   I K
Sbjct: 59  FTSCIEK 65

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 39.9 bits (93), Expect = 5e-05
 Identities = 8/61 (13%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 309 AFLK-ADNDGD--YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            F   A  +G    ++ + F E + Q                +     D++ +  + + E
Sbjct: 19  TFFTFARQEGRKDSLSVNEFKELVTQQ---LPHLLKDVGSLDEKMKSLDVNQDSELKFNE 75

Query: 366 F 366
           +
Sbjct: 76  Y 76

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 306 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
             F  +   + D + ++     + ++                 DL+ + D +G+G V ++
Sbjct: 11  SIFEKYAAKEGDPNQLSKEELKQLIQAE---FPSLLKGPRTLDDLFQELDKNGDGEVSFE 67

Query: 365 EFQQRIWKTT 374
           EFQ  + K +
Sbjct: 68  EFQVLVKKIS 77

>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Length = 293

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 13/223 (5%)

Query: 59  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 118
              R   I      + + ++ L E +  +          L +       +   +  G   
Sbjct: 25  QMHRADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLREMYPHQTPVIGRSKHGWDK 82

Query: 119 LTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR-------QEILIV 171
               + ++        ++        +Q +             G          +   I+
Sbjct: 83  TEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQRGGGADRLSNKGFAYVKIMKNGKPYHII 142

Query: 172 NTHLLFPH-DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 230
            TH        S    R  +  ++ +      K++  K   I + GD N +     Y  +
Sbjct: 143 GTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGTDEYHDM 202

Query: 231 RSQGFVSSYDTAHQYT---DADAHKWVSHRNHRGNICGVDFIW 270
                VSS    +      D   +  +     +     +D+I+
Sbjct: 203 LKLLNVSSPANFNGQMATWDPTTNSMLKESYPKAAPEYLDYIF 245

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 18/136 (13%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 234 GFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMF 293
           G +S+ +          +          +    D    ++ +++  ++  S  +   G  
Sbjct: 30  GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 89

Query: 294 KCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADEETKDLWVQ 352
           +  L            F   D + D     G+ +  E   +       + +++ ++L   
Sbjct: 90  EEELSDL---------FRMFDKNAD-----GYIDLEELKIMLQATGETITEDDIEELMKD 135

Query: 353 ADIDGNGVVDYKEFQQ 368
            D + +G +DY EF +
Sbjct: 136 GDKNNDGRIDYDEFLE 151

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           +AFA    DN+G  I+ S     +  L         ++ E  DL  + D+DGN  +++ E
Sbjct: 14  EAFALFDKDNNG-SISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSE 67

Query: 366 F 366
           F
Sbjct: 68  F 68

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
            AF       +   I+     + +              EE +++  + D DG+G VD+ E
Sbjct: 19  AAFDIFVLGAEDGSISTKELGKVMRM-----LGQNPTPEELQEMIDEVDEDGSGTVDFDE 73

Query: 366 F 366
           F
Sbjct: 74  F 74

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 310 FLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           F K     D I        +++   N              D++ + D + +  +D+ EF
Sbjct: 16  FHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF 74

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 36.5 bits (84), Expect = 5e-04
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           D F     + DG YI        L+    T  +      + ++L    D + +G +DY E
Sbjct: 19  DLFRMFDKNADG-YIDLEELKIMLQATGETITED-----DIEELMKDGDKNNDGRIDYDE 72

Query: 366 FQQ 368
           F +
Sbjct: 73  FLE 75

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 309 AFLKADNDGDYITYSGFCEALEQLNLTGHKH---GLADEETKDLWVQADIDGNGVVDYKE 365
            F K   D   I+       L ++          G + E  + +    D DGNG +   E
Sbjct: 25  LFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVE 84

Query: 366 FQQRIWKTTWSDQRNDLNDEDEDGFVKSS 394
           F     +           D D+ G + + 
Sbjct: 85  FNILWNRIRNYLTIFRKFDLDKSGSMSAY 113

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 314 DNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 372
           D D    ++      A+E              +   + V    D   ++D+  F + + +
Sbjct: 103 DLDKSGSMSAYEMRMAIEAAGFK------LPCQLHQVIVARFADDELIIDFDNFVRCLVR 156

Query: 373 TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSV 403
                +     D +  G ++  L   + FSV
Sbjct: 157 LEILFKIFKQLDPENTGTIQLDLISWLSFSV 187

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.7 bits (82), Expect = 8e-04
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
           + F     + DG +I      E      L      + +E+ +DL   +D + +G +D+ E
Sbjct: 13  NCFRIFDKNADG-FIDIEELGE-----ILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 66

Query: 366 F 366
           F
Sbjct: 67  F 67

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 292 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLW 350
           +    +      E    AF   D+D    I++       ++L        L DEE +++ 
Sbjct: 67  VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-----ENLTDEELQEMI 121

Query: 351 VQADIDGNGVVDYKEFQQ 368
            +AD DG+G V  +EF +
Sbjct: 122 DEADRDGDGEVSEQEFLR 139

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 306 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 364
             F  +   + D   ++     E +++         L D E   L    D + +  V+++
Sbjct: 13  AIFHKYSGREGDKHTLSKKELKELIQKEL--TIGSKLQDAEIARLMEDLDRNKDQEVNFQ 70

Query: 365 EFQQRIWKTT 374
           E+   +    
Sbjct: 71  EYVTFLGALA 80

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
           AF   D DGD  IT       +  L          + E +D+  + D DGNG +D+ EF
Sbjct: 13  AFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEF 66

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 309 AFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            + K +   G++       + L++L  T     +  +     + + DI+ +G V+++EF 
Sbjct: 15  VYHKYSLIKGNFHAVY--RDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72

Query: 368 QRIWKTT 374
             + K  
Sbjct: 73  ILVIKMG 79

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 9/121 (7%)

Query: 249 DAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAF 308
              + +     +  +  +      + +             +         +    E  A 
Sbjct: 44  TVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF---EEFLVMMVRQMKEDAKGKSEEELAN 100

Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
            F   D + D +I      E L           + +E+ +DL   +D + +G +D+ EF 
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155

Query: 368 Q 368
           +
Sbjct: 156 K 156

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 312 KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW 371
           + D DG           +    +     G ++EE  + +   D + +G +D +E  + + 
Sbjct: 64  EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 123

Query: 372 KTTWSDQRNDLN------DEDEDGFV 391
            T       D+       D++ DG +
Sbjct: 124 ATGEHVTEEDIEDLMKDSDKNNDGRI 149

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 8/92 (8%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-------LTG 336
            + E +  +            + AF     ++DG YIT+      +  +           
Sbjct: 81  HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDG-YITFDEMLTIVASVYKMMGSMVTLN 139

Query: 337 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
                 +   K ++   D + +G +   EF++
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTG 336
            +SE +  +              AF     DNDG YIT +   + ++             
Sbjct: 78  EFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDG-YITRNEMLDIVDAIYQMVGNTVELP 136

Query: 337 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
            +    ++    ++   D + +G +  +EFQ+
Sbjct: 137 EEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 168

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 7/58 (12%)

Query: 309 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
            F        +++       L           L  +    +W  +DID +G++D  EF
Sbjct: 15  IFDSLSPVNGFLSGDKVKPVL-------LNSKLPVDILGRVWELSDIDHDGMLDRDEF 65

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 314 DNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI 370
           D DG+  I+ +     +  L        L D+E  ++  +ADIDG+G ++Y+EF + +
Sbjct: 92  DRDGNGLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMM 144

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.004
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 6/84 (7%)

Query: 283 ASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 342
           A+    +       +       T  F           I+   F     +         L 
Sbjct: 1   ATADRDILARLHKAVTSHYHAITQEFENFDTMKTN-TISREEFRAICNRRVQI-----LT 54

Query: 343 DEETKDLWVQADIDGNGVVDYKEF 366
           DE+   LW +  ++  G + Y +F
Sbjct: 55  DEQFDRLWNEMPVNAKGRLKYPDF 78

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 284 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEAL-------EQLNLTG 336
            + E +  +      +       AF+    D +G YI+ +   E +         +    
Sbjct: 77  DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNG-YISKAEMLEIVQAIYKMVSSVMKMP 135

Query: 337 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 368
                 ++ T+ ++ Q D + +G +  +EF +
Sbjct: 136 EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 167

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	445
d1zwxa1	293	Sphingomyelin phosphodiesterase C {Listeria ivanov	99.89
d2ddra1	299	Sphingomyelin phosphodiesterase C {Bacillus cereus	99.86
d1vyba_	236	Endonuclease domain of LINE-1 reverse transcriptas	99.82
d2a40b1	260	Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913	99.79
d1sr4b_	261	Cytolethal distending toxin subunit B {Haemophilus	99.74
d2f1na1	250	Cytolethal distending toxin subunit B {Escherichia	99.72
d1wdua_	228	Endonuclease domain of TRAS1 retrotransposon (ORF2	99.7
d1hd7a_	275	DNA repair endonuclease Hap1 {Human (Homo sapiens)	99.7
d1akoa_	268	DNA-repair enzyme exonuclease III {Escherichia col	99.53
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.51
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.49
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.48
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.47
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.47
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.47
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.46
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.45
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.45
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.45
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.43
d2imqx1	280	Salivary nitrophorin {Bedbug (Cimex lectularius) [	99.43
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.41
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.39
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.38
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.37
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.32
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.28
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.27
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.26
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.25
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	99.24
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.17
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	99.16
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	99.16
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.14
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.13
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.13
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.13
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	99.13
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.12
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	99.12
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.12
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.11
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	99.11
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1i9za_	345	Synaptojanin, IPP5C domain {Fission yeast (Schizos	99.1
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.1
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	99.09
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.08
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.08
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.07
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	99.04
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.01
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.0
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	99.0
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.0
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.98
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.97
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.97
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.96
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.96
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.95
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.95
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.92
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.91
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.91
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.89
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.88
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.88
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.88
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.85
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.84
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.83
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.81
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.81
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.8
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.79
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.77
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.77
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.76
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.75
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	98.74
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.73
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.71
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	98.71
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.71
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.7
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.69
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.67
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	98.67
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.67
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.67
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.64
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.64
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.63
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.62
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.58
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.57
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.54
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.51
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.51
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.51
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.49
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.49
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.48
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.45
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.4
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.34
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.33
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.22
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.19
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.1
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.1
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.01
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.96
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	97.9
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	97.89
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	97.84
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	97.79
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.64
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	97.53
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	97.46
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.45
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.43
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	97.23
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.21
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.21
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	97.16
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	96.87
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	96.68
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.43
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	96.16
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	95.73
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.62
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	95.42
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.33
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	95.17
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	95.16
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	95.08
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	94.58
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	94.5
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	94.23
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	94.1
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	94.08
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	93.96
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	93.73
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	93.49
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	93.21
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	93.18
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	92.81
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	92.62
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	92.17
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	92.01
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	91.8
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	91.55
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	91.2
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	90.93
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	90.66
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	90.4
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	90.24
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	89.79
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	88.11
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	86.98
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	86.17
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	84.9
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	84.37
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	83.23
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	83.12
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	82.66
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	81.87
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	81.83
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	81.81
d1wlma1	138	Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090	81.45

>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]

Probab=99.89  E-value=6.2e-23  Score=191.39  Aligned_cols=226  Identities=14%  Similarity=0.076  Sum_probs=133.9

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      |+.|||+||||+.+...         ......+..|.+.|++.|...+|||||||||.  .....+.+...+.. .|...
T Consensus         2 ~~~lki~s~Nv~~~~~~---------~~~~~~~~~r~~~i~~~i~~~~~DVi~LQEv~--~~~~~~~l~~~~~~-~~~~~   69 (293)
T d1zwxa1           2 PGNFKITSHNVYLFSRN---------IYPNWGQMHRADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLRE-MYPHQ   69 (293)
T ss_dssp             CCSCEEEEEEEEECCTT---------TSTTSCHHHHHHHHHTSGGGSSCSEEEEEEEC--SHHHHHHHHHHTTT-TCCEE
T ss_pred             CCCCEEEEEecCcCccc---------cCCCcCHHHHHHHHHHHHHhcCCCEEEEEccC--CcchHHHHHHHHhh-hccce
Confidence            46899999999855211         01122456789999999999999999999995  33444455555542 23222


Q ss_pred             EecC----------------CCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEE
Q 013328          107 KLAR----------------TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILI  170 (445)
Q Consensus       107 ~~~~----------------~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v  170 (445)
                      ....                ......|++|+  |+ +|+.....+.+.........     ....+..+.....+..++|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~il--sr-~pi~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v  141 (293)
T d1zwxa1          70 TPVIGRSKHGWDKTEGNYSNFALEDGGVAVV--SQ-WPIVEKSQHIFQRGGGADRL-----SNKGFAYVKIMKNGKPYHI  141 (293)
T ss_dssp             CCCTTSCSTTCSEEEC-----CCBCCCCEEE--ES-SCEEEEEEEECSCCCGGGGG-----BCCEEEEEEEEETTEEEEE
T ss_pred             ehhcccccccccccccccccccccccceEEE--ec-cCcccceeeeeecccccccc-----ccceEEEEEEecCCceEEE
Confidence            1110                11123489999  88 89888776655443211110     0011112333446889999


Q ss_pred             EEeeeeCCCCCC----ChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhC-CCcccccccccC
Q 013328          171 VNTHLLFPHDSS----LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSYDTAHQY  245 (445)
Q Consensus       171 ~n~HL~~~~~~~----~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~~~~~~~  245 (445)
                      +++||.++....    ....|..|++.+...+.+..   ...+.|+|||||||..|.+..++.+.+. ++.+........
T Consensus       142 ~~~Hl~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~vil~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (293)
T d1zwxa1         142 IGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKN---IPKDEIIFIGGDLNVNYGTDEYHDMLKLLNVSSPANFNGQM  218 (293)
T ss_dssp             EEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT---CCTTSEEEEEEECCCCTTSHHHHHHHHHHTBCCCTTCCTTS
T ss_pred             EEeeeeccCCccchhHHHHHHHHHHHHhhhhhhhhc---cCCCCcEEEEeecCCCCCchHHHHHHhhccccchhhcccCC
Confidence            999998754322    23456777777777766542   2356789999999999999988877654 333333222211


Q ss_pred             CCCC--CCcceeccCCCCcccccceeeecCCc
Q 013328          246 TDAD--AHKWVSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       246 ~~~~--~~t~~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                      ....  ..++.......+...||||||+++..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~iD~I~~s~~~  250 (293)
T d1zwxa1         219 ATWDPTTNSMLKESYPKAAPEYLDYIFVENGH  250 (293)
T ss_dssp             CSBCTTTCHHHHHHCTTSCCBCCEEEEEBTTS
T ss_pred             cccccccccccccccCCCCCceEEEEEEeccc
Confidence            1111  11111111122335689999998764

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=1.3e-21  Score=182.91  Aligned_cols=179  Identities=14%  Similarity=0.075  Sum_probs=107.2

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhc-cCccEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD-AGYVNF  106 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~-~gy~~~  106 (445)
                      ++||||||||+.+.   ...      .....+..|.+.|++.|...+|||||||||.  .....+.+...+.. ++|.+.
T Consensus         2 ~tl~v~s~Nv~~~~---~~~------~~~~~~~~r~~~i~~~i~~~~~DIi~LQEv~--~~~~~~~~~~~l~~~~~~~~~   70 (299)
T d2ddra1           2 DTLKVMTHNVYMLS---TNL------YPNWGQTERADLIGAADYIKNQDVVILNEVF--DNSASDRLLGNLKKEYPNQTA   70 (299)
T ss_dssp             CEEEEEEEEEEECC---TTT------CTTSCHHHHHHHHHHCSTTCSCSEEEEEEEC--CHHHHHHHHHHHTTTCCEECC
T ss_pred             CceEEEEEECCccc---ccc------CCCcCHHHHHHHHHHHHHhcCCCEEEEEccC--CcchHHHHHHHHHHhcCceee
Confidence            58999999998652   110      1122367899999999999999999999994  33344445444442 333222


Q ss_pred             EecC---------------CCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEE
Q 013328          107 KLAR---------------TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIV  171 (445)
Q Consensus       107 ~~~~---------------~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~  171 (445)
                      ....               ......|++++  ++ +|+.....+............     ...+........+..++|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--s~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~  142 (299)
T d2ddra1          71 VLGRSSGSEWDKTLGNYSSSTPEDGGVAIV--SK-WPIAEKIQYVFAKGCGPDNLS-----NKGFVYTKIKKNDRFVHVI  142 (299)
T ss_dssp             CTTSCCSTTSSEEEESCCTTCSSCCCCEEE--ES-SCEEEEEEEECSCCC----CC-----CCEEEEEEEEETTEEEEEE
T ss_pred             ecccccccccceeeecccccccccceeEEE--EE-eecccceeeeeecccCccccc-----ceeEEEEEEecCCeEEEEE
Confidence            1110               11123488988  77 777766666444322110000     0001112333468899999


Q ss_pred             EeeeeCCCCC----CChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhH
Q 013328          172 NTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYK  228 (445)
Q Consensus       172 n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~  228 (445)
                      |+||.+....    .....|..|+..+...+....   ...+.|||+|||||..|.+..+.
T Consensus       143 ~~Hl~~~~~~~~~~~~~~~r~~q~~~~~~~~~~~~---~~~~~~vi~~GDfN~~~~~~~~~  200 (299)
T d2ddra1         143 GTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKN---IPNNEYVLIGGDMNVNKINAENN  200 (299)
T ss_dssp             EEECCCC-------CHHHHHHHHHHHHHHHHHHHT---CCTTSCEEEEEECCCCCTTTSSC
T ss_pred             EccccCCCCccchhhhHHHHHHHHHHHhhhhhhhc---ccccceEEEEecCCCCccchhhh
Confidence            9999775321    223457778877777665432   23567999999999988765443

>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of LINE-1 reverse transcriptase homolog
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.3e-20  Score=166.86  Aligned_cols=195  Identities=16%  Similarity=0.178  Sum_probs=113.0

Q ss_pred             CCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE
Q 013328           27 QPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  106 (445)
Q Consensus        27 ~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  106 (445)
                      ..+|||+||||++..                 ...|+..|.++|.+.+||||||||+........     .+...++.++
T Consensus         3 ~~~~kv~s~Nv~g~~-----------------~~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~-----~~~~~~~~~~   60 (236)
T d1vyba_           3 NSHITILTLNINGLN-----------------SAIKRHRLASWIKSQDPSVCCIQETHLTCRDTH-----RLKIKGWRKI   60 (236)
T ss_dssp             CCCEEEEEEECSCCC-----------------SHHHHHHHHHHHHHHCCSEEEEECCCCCTTSGG-----GCCCTTCCEE
T ss_pred             CCCeEEEEEEcCCcc-----------------chhhHHHHHHHHHHCCCeEEEEEcccCccccch-----hhhhcccceE
Confidence            468999999997441                 233678899999999999999999853322211     1122344444


Q ss_pred             EecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhh
Q 013328          107 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLV  186 (445)
Q Consensus       107 ~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~  186 (445)
                      +.........|+||+++.+ ...... .+.... .... ..           +.....+..++++|+|+....       
T Consensus        61 ~~~~~~~~~~g~~i~~k~~-~~~~~~-~~~~~~-~~~~-~~-----------~~~~~~~~~~~~~~~y~~~~~-------  118 (236)
T d1vyba_          61 YQANGKQKKAGVAILVSDK-TDFKPT-KIKRDK-EGHY-IM-----------VKGSIQQEELTILNIYAPNTG-------  118 (236)
T ss_dssp             EEECCSSSSCCEEEEECTT-CCCEEE-EEEECT-TSSE-EE-----------EEEEETTEEEEEEEEECCSSS-------
T ss_pred             EEeeccccccceeeEeecc-cccccc-cccccc-cccc-ee-----------eeeeeccCcceeEEecccccc-------
Confidence            4444445556999996554 222211 111111 1111 11           222345788999999884321       


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------chhHhhhhCCCcccccccccCCCCCCCc
Q 013328          187 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------HVYKFLRSQGFVSSYDTAHQYTDADAHK  252 (445)
Q Consensus       187 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------~~~~~l~~~g~~d~~~~~~~~~~~~~~t  252 (445)
                      .......   .+..+.+   ..+.|+|||||||.....              .....+.+.|+.|+|+..+..  +...+
T Consensus       119 ~~~~~~~---~~~~~~~---~~~~~~Il~GDfN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~~~~--~~~~~  190 (236)
T d1vyba_         119 APRFIKQ---VLSDLQR---DLDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPK--STEYT  190 (236)
T ss_dssp             HHHHHHH---HHHHTTT---TCCTTEEEEEECSSCSSGGGBTTCCCCCHHHHHHHHHHHHTTEEEHHHHHCTT--CCCCS
T ss_pred             cHHHHHh---hhhhhcc---cccceeEEeeccccccchhhhcccccchhhHHHHHHHHHhhhcccccceeccC--Ccccc
Confidence            1112222   2222221   256799999999975432              234556678999999876543  22345


Q ss_pred             ceeccCCCCcccccceeeecCCc
Q 013328          253 WVSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       253 ~~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                      |....  .+...||||||+++..
T Consensus       191 ~~~~~--~~~~~RiD~il~s~~~  211 (236)
T d1vyba_         191 FFSAP--HHTYSKIDHIVGSKAL  211 (236)
T ss_dssp             EEETT--TTEEECCEEEEEEGGG
T ss_pred             ccCCC--CCCCceeEEEEEChHH
Confidence            54433  2345699999997654

>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Deoxyribonuclease I
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=7.2e-19  Score=158.11  Aligned_cols=214  Identities=14%  Similarity=0.050  Sum_probs=116.8

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhc-cCccEEEe
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD-AGYVNFKL  108 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~-~gy~~~~~  108 (445)
                      |||+||||+++...            ......+++.|++.|  .+|||||||||+.........+...+.. .++...+.
T Consensus         1 lrI~s~Ni~~~~~~------------~~~~~~~~~~l~~~i--~~~DIi~LQEv~~~~~~~~~~l~~~~~~~~~~~~~~~   66 (260)
T d2a40b1           1 LKIAAFNIRTFGET------------KMSNATLASYIVRIV--RRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYV   66 (260)
T ss_dssp             CEEEEEEEEEESHH------------HHHSHHHHHHHHHHH--TTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCEEE
T ss_pred             CEEEEEeCCccCCC------------ccccHHHHHHHHHHc--CCCCEEEEEeeecCCchhHHHHHHhhhhcccCcceeE
Confidence            79999999865210            001122445555555  4899999999975443333333333322 22222222


Q ss_pred             --cC--CCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeeccccccccc-ccccCCCCceEEEEEeeeeCCCCCCC
Q 013328          109 --AR--TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFS-QCRNGDLRQEILIVNTHLLFPHDSSL  183 (445)
Q Consensus       109 --~~--~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~v~v~n~HL~~~~~~~~  183 (445)
                        ..  ......+.+++++.....+..................   ....... ..........+.+++.|+.+    ..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  139 (260)
T d2a40b1          67 VSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF---SREPAVVKFSSHSTKVKEFAIVALHSAP----SD  139 (260)
T ss_dssp             ECCCBCSSSCCBEEEEEECTTTCEEEEEEECCTTSTTTHHHHC---SSCCEEEEEECTTSSSSEEEEEECCCCG----GG
T ss_pred             ecccCCCCccccceeeeecccccceeccceeccccccCccccc---cccceeeeeecccccceEEEEEeecccc----ch
Confidence              11  1223457888888776566544333221111100000   0000000 11222345679999999855    23


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCCCCCcceeccCCCCcc
Q 013328          184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNI  263 (445)
Q Consensus       184 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~~~~~~~~  263 (445)
                      ...|..|...+.+.+....     .+.|+|+|||||..+.+..++.+...++.+.+......  ....+|....    ..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~-----~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~  208 (260)
T d2a40b1         140 AVAEINSLYDVYLDVQQKW-----HLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLI--PDSADTTATS----TN  208 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-----CCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTTEEESS--CTTCCCBSSS----CC
T ss_pred             hhHHHHHHHHHHHHHHhhc-----cCCCEEEcccccCCccchhhhhhhhhcccccccccccC--CCCCccccCC----CC
Confidence            4567777777777776543     57799999999999999888887665554333322211  1122333222    25


Q ss_pred             cccceeeecCCc
Q 013328          264 CGVDFIWLLNPN  275 (445)
Q Consensus       264 ~rIDyi~~~~~~  275 (445)
                      +||||||+++..
T Consensus       209 ~~iD~i~~s~~~  220 (260)
T d2a40b1         209 CAYDRIVVAGSL  220 (260)
T ss_dssp             CCCEEEEEESHH
T ss_pred             CceeEEEeCchh
Confidence            689999997653

>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Haemophilus ducreyi [TaxId: 730]

Probab=99.74  E-value=2.4e-19  Score=163.59  Aligned_cols=94  Identities=12%  Similarity=0.093  Sum_probs=57.3

Q ss_pred             eEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCC
Q 013328          167 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYT  246 (445)
Q Consensus       167 ~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~  246 (445)
                      ...++++|+......    .+..+..................+.|+|+|||||..|.+..++.+...++.+++...++. 
T Consensus       131 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~-  205 (261)
T d1sr4b_         131 TDVFFTVHALATGGS----DAVSLIRNIFTTFNSSSSPPERRVYSWMVVGDFNRAPANLEVALRQEPAVSENTIIIAPT-  205 (261)
T ss_dssp             TEEEEEEECCTTTTT----THHHHHHHHHHHHHC---CGGGGGCEEEEEEECSSCHHHHHHHHTTSHHHHHTCEEECCS-
T ss_pred             cccceEEEEeecCCc----ccHHHHHHHHHHHHHHHHHhhccCCCEEEeeecCcCcccHHHHHhhhhccccceeccCCC-
Confidence            356788888664422    123333322222221111111256789999999999999999999888888877765431 


Q ss_pred             CCCCCcceeccCCCCcccccceeeecCCc
Q 013328          247 DADAHKWVSHRNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       247 ~~~~~t~~~~~~~~~~~~rIDyi~~~~~~  275 (445)
                         .+||   ..    ..||||||+++..
T Consensus       206 ---~~t~---~~----~~~iD~i~~~~~~  224 (261)
T d1sr4b_         206 ---EPTH---RS----GNILDYAILHDAH  224 (261)
T ss_dssp             ---SCSB---TT----SCCCEEEEEECTT
T ss_pred             ---CCcC---CC----CCeeceEEecCcc
Confidence               2222   21    3579999997664

>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=8.7e-19  Score=159.65  Aligned_cols=200  Identities=11%  Similarity=-0.009  Sum_probs=97.4

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEE-
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF-  106 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~-  106 (445)
                      ..|||+||||++....           ....|..+...  ..+...+|||||||||+....... .....+...++.+. 
T Consensus         3 ~~~rv~TwNi~~~~~~-----------~~~~~~~~~~~--~~~~~~~~DVl~lQEv~~~~~~~~-~~~~~~~~~~~~~~~   68 (250)
T d2f1na1           3 TDFRVATWNLQGASAT-----------TESKWNINVRQ--LISGENAVDILAVQEAGSPPSTAV-DTGRVIPSPGIPVRE   68 (250)
T ss_dssp             GGCCEEEEEEEECTTS-----------CHHHHHTHHHH--HHSSTTCCSEEEEEEECSCCTTCE-ECCCCCCCSSCCCEE
T ss_pred             CCCEEEEEeCCCCcCc-----------ccccchHHHHH--HHHhcCCCCEEEEEccCcccccch-hHhhhhhhcCcccee
Confidence            3699999999865311           11123333222  235567899999999953221100 00111111122111 


Q ss_pred             ----------------Ee--cCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceE
Q 013328          107 ----------------KL--ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEI  168 (445)
Q Consensus       107 ----------------~~--~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  168 (445)
                                      +.  ........|++++  ++ +++.......++....+....               ...+.+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~--s~-~~~~~~~~~~~~~~~~r~~~~---------------~~~~~~  130 (250)
T d2f1na1          69 LIWNLSTNSRPQQVYIYFSAVDALGGRVNLALV--SN-RRADEVFVLSPVRQGGRPLLG---------------IRIGND  130 (250)
T ss_dssp             EEEECCSSSSSCEEEEEEECSCSSSCSSCEEEE--ES-SCCSEEEEECCSSTTCCCEEE---------------EEETTE
T ss_pred             eeeccccccCcceeEEEeecccccccCcceEEE--EC-CccceeEecCCCcccccceee---------------EeeceE
Confidence                            11  1111223478888  55 455444444333322221110               123579


Q ss_pred             EEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcchhHhhhhCCCcccccccccCCCC
Q 013328          169 LIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDA  248 (445)
Q Consensus       169 ~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~  248 (445)
                      .|+|+||.+...    ..|..+++.+....+..... .....|+|+|||||..|.+.....+.  ++.+.+...++    
T Consensus       131 ~v~n~Hl~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~GDfN~~p~~~~~~~~~--~~~~~~~~~~~----  199 (250)
T d2f1na1         131 AFFTAHAIAMRN----NDAPALVEEVYNFFRDSRDP-VHQALNWMILGDFNREPADLEMNLTV--PVRRASEIISP----  199 (250)
T ss_dssp             EEEEEECCSSSS----CSHHHHHHHHHHHHHTCSSH-HHHTCEEEEEEECSSCHHHHHTTSCH--HHHHTEEEECC----
T ss_pred             EEEEEEcCCCCc----hhHHHHHHHHHHHHHHHHhh-hccCCceEEecccCcCCchhhhhhhc--cccceeeecCC----
Confidence            999999976432    22344443333222221100 01467999999999988764433332  23333333321    


Q ss_pred             CCCcceeccCCCCcccccceeeecCCccc
Q 013328          249 DAHKWVSHRNHRGNICGVDFIWLLNPNKY  277 (445)
Q Consensus       249 ~~~t~~~~~~~~~~~~rIDyi~~~~~~~~  277 (445)
                      ..+||++       ..||||||+++....
T Consensus       200 ~~~t~~~-------~~riD~i~~s~~~~~  221 (250)
T d2f1na1         200 AAATQTS-------QRTLDYAVAGNSVAF  221 (250)
T ss_dssp             SSCSBTT-------SCCCEEEEEEESSCC
T ss_pred             CCCccCC-------CCcEEEEEEechHhc
Confidence            1234432       347999999866543

>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of TRAS1 retrotransposon (ORF2)
species: Silkworm (Bombyx mori) [TaxId: 7091]

Probab=99.70  E-value=7e-17  Score=144.50  Aligned_cols=188  Identities=14%  Similarity=0.088  Sum_probs=98.8

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEE
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  107 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  107 (445)
                      ++||||||||....                   .+...++..|.+.+||||||||++....      .......+|.+++
T Consensus         1 ~p~rV~~~Nv~~~~-------------------~~~~~l~~~i~~~~~DIi~lQE~~~~~~------~~~~~~~~~~~~~   55 (228)
T d1wdua_           1 PPYRVLQANLQRKK-------------------LATAELAIEAATRKAAIALIQEPYVGGA------KSMKGFRGVRVFQ   55 (228)
T ss_dssp             CCEEEEEEECTTCH-------------------HHHHHHHHHHHHHTCSEEEEESCCC------------CCCSSCEEEE
T ss_pred             CCEEEEeeccCCCh-------------------HHHHHHHHHHHhcCCCEEEEECCCcCCC------CccccccceEEEe
Confidence            36999999998542                   2457899999999999999999864331      1122223555555


Q ss_pred             ecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhH
Q 013328          108 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  187 (445)
Q Consensus       108 ~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R  187 (445)
                      .........|++++++++.+.+..   .  .........           .+.+...++.++++|+|+..+..   ..  
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~-----------~~~i~~~~~~i~v~~~y~~~~~~---~~--  114 (228)
T d1wdua_          56 STAQGDGTVKAAIAVFDHDLDVIQ---Y--PQLTTNNIV-----------VVGIRTRAWEITLVSYYFEPDKP---IE--  114 (228)
T ss_dssp             CCCCTTCCCCEEEEECCSSCEEEE---C--TTTCCSSEE-----------EEEEECSSCEEEEEEEECCTTSC---SH--
T ss_pred             ccCCCCCCcceEEEEEccccceec---c--cCCCCCCEE-----------EEEEEcCCccEEEEEEEeCCccc---ch--
Confidence            544455556777776665333221   1  111111111           12333467899999999743221   11  


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcch-----------hHhhhhCCCcccccccccCCCCCCCcceec
Q 013328          188 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHV-----------YKFLRSQGFVSSYDTAHQYTDADAHKWVSH  256 (445)
Q Consensus       188 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~-----------~~~l~~~g~~d~~~~~~~~~~~~~~t~~~~  256 (445)
                       ...    +.+..+...  ....|+|||||||..+....           ...+...++...       .....++|...
T Consensus       115 -~~~----~~l~~~~~~--~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~  180 (228)
T d1wdua_         115 -SYL----EQIKRVERK--MGPKRLIFGGDANAKSTWWGSKEDDARGDQLMGTLGELGLHIL-------NEGDVPTFDTI  180 (228)
T ss_dssp             -HHH----HHHHHHHHT--TCSSSEEEEEECCCCCGGGTCSSCCHHHHHHHHHHHHHTCEEC-------CCSCCCSEEC-
T ss_pred             -HHH----HHHHHHHHh--cCCceEEEecccccCchhHhcccchhHHHHHHHHHHhhCcccc-------ccCCccccccc
Confidence             111    222222221  15668999999998543211           111212222211       11223455443


Q ss_pred             cCCCCcccccceeeecCCc
Q 013328          257 RNHRGNICGVDFIWLLNPN  275 (445)
Q Consensus       257 ~~~~~~~~rIDyi~~~~~~  275 (445)
                      ........||||+|+++..
T Consensus       181 ~~~~~~~~rID~~~~s~~l  199 (228)
T d1wdua_         181 RGGKRYQSRVDVTFCTEDM  199 (228)
T ss_dssp             ----CCEECCEEEEECGGG
T ss_pred             cCCCCCCcceEEEEECchH
Confidence            3323335689999997654

>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: DNA repair endonuclease Hap1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.3e-17  Score=149.51  Aligned_cols=208  Identities=13%  Similarity=0.101  Sum_probs=97.8

Q ss_pred             CCCceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccE
Q 013328           26 QQPCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  105 (445)
Q Consensus        26 ~~~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  105 (445)
                      .+.+|||+||||.+..                  ....+.++++|++.+||||||||+.....++...+..   ..+|.+
T Consensus        15 ~~~~mki~S~NvnGlr------------------~~~~~~~~~~i~~~~pDIi~LQE~k~~~~~~~~~~~~---~~~~~~   73 (275)
T d1hd7a_          15 KPATLKICSWNVDGLR------------------AWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQE---LPGLSH   73 (275)
T ss_dssp             CBCCEEEEEEECSSHH------------------HHHHTTHHHHHHHHCCSEEEEECCCCCC--------------CCCE
T ss_pred             CCCcEEEEEEEeccHH------------------hhhhccHHHHHHhCCCCEEEEEccccChhhCCHHHHh---ccCcce
Confidence            4467999999996331                  0012457789999999999999996544444333332   235544


Q ss_pred             EEecCC-C-CCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCC
Q 013328          106 FKLART-N-NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL  183 (445)
Q Consensus       106 ~~~~~~-~-~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~  183 (445)
                      ...... + ....|++++++.....+.  .............. .           ........+....+|.....  ..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~--~~  137 (275)
T d1hd7a_          74 QYWSAPSDKEGYSGVGLLSRQCPLKVS--YGIGDEEHDQEGRV-I-----------VAEFDSFVLVTAYVPNAGRG--LV  137 (275)
T ss_dssp             EEEECC-----CCCEEEEESSCCSEEE--ESCSCGGGSSSSCE-E-----------EEECSSCEEEEEECCCCCGG--GT
T ss_pred             eeeeeecccccccccceecccCceeee--eccccccchhhhhe-e-----------eeeecceeeeeeeeeecccc--cc
Confidence            433222 2 233467777554432221  11111111111000 0           00112233444444432211  11


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCcc---------------------hhHhhhhCCCccccccc
Q 013328          184 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH---------------------VYKFLRSQGFVSSYDTA  242 (445)
Q Consensus       184 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~---------------------~~~~l~~~g~~d~~~~~  242 (445)
                      ..........+.........    .+.+++++||||..+...                     ..+.+...|+.|+|+..
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~gd~n~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~D~~r~~  213 (275)
T d1hd7a_         138 RLEYRQRWDEAFRKFLKGLA----SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHL  213 (275)
T ss_dssp             THHHHHHHHHHHHHHHHHHH----HHSCEEEEEECSCCCSGGGBSCHHHHTTSTTSCHHHHHHHHHHHHHTTCEEHHHHH
T ss_pred             chhhhhhhcccccccccccc----cCCceEeecccccCcchhhhccchhhhcccccccccchhhhhhhcccCcccceeee
Confidence            11111111111111111111    356899999999865421                     12345557999999987


Q ss_pred             ccCCCCCCCcceecc-CC--CCcccccceeeecCCc
Q 013328          243 HQYTDADAHKWVSHR-NH--RGNICGVDFIWLLNPN  275 (445)
Q Consensus       243 ~~~~~~~~~t~~~~~-~~--~~~~~rIDyi~~~~~~  275 (445)
                      ++..+. ..||.+.. ..  .....||||||+++..
T Consensus       214 ~p~~~~-~~t~~~~~~~~~~~~~g~RIDyi~vs~~l  248 (275)
T d1hd7a_         214 YPNTPY-AYTFWTYMMNARSKNVGWRLDYFLLSHSL  248 (275)
T ss_dssp             CTTCTT-CCSBCCSGGGHHHHTCCBCCEEEEECGGG
T ss_pred             cCCcCC-ceeeccccCCcccCCCCeEeEEEEeChHH
Confidence            765433 34443322 11  1223689999997665

>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: DNA-repair enzyme exonuclease III
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=1.4e-14  Score=130.77  Aligned_cols=208  Identities=17%  Similarity=0.225  Sum_probs=103.8

Q ss_pred             eEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcEEEEeecccChhhHHHHHHHHhhccCccEEEec
Q 013328           30 ITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLA  109 (445)
Q Consensus        30 lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~  109 (445)
                      |||+||||++.                   ..|.+.+.++|++.+|||||||||+...+.+.   ...+...+|.+....
T Consensus         1 Mki~S~NvnG~-------------------r~r~~~i~~~i~~~~~DIi~LQEv~~~~~~~~---~~~~~~~~~~~~~~~   58 (268)
T d1akoa_           1 MKFVSFNINGL-------------------RARPHQLEAIVEKHQPDVIGLQETKVHDDMFP---LEEVAKLGYNVFYHG   58 (268)
T ss_dssp             CEEEEEECSCG-------------------GGCHHHHHHHHHHHCCSEEEEECCCCCGGGCC---HHHHHHTTCEEEEEE
T ss_pred             CEEEEEEeCCH-------------------HHhHHHHHHHHHHCCCCEEEEEeeecChhhCC---HHHHhhcCceeeecc
Confidence            69999999732                   23678999999999999999999976554433   233344677665542


Q ss_pred             CCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCceEEEEEeeeeCCCCCCChhhHHH
Q 013328          110 RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLH  189 (445)
Q Consensus       110 ~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~HL~~~~~~~~~~~R~~  189 (445)
                      ....  .+..... .. .+.. .. ..............        ...........+.++..+...+... ....+..
T Consensus        59 ~~~~--~~~~~~~-~~-~~~~-~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  123 (268)
T d1akoa_          59 QKGH--YGVALLT-KE-TPIA-VR-RGFPGDDEEAQRRI--------IMAEIPSLLGNVTVINGYFPQGESR-DHPIKFP  123 (268)
T ss_dssp             ETTE--EEEEEEE-SS-CCSE-EE-ESSTTCCHHHHTTE--------EEEEEEETTEEEEEEEEECCCCCBT-TCTTHHH
T ss_pred             cccc--ccccccc-cc-cchh-cc-cCcccccccccccc--------ceeecccccCCeEEEEeeeccCCcc-cchhhhh
Confidence            2211  1222221 22 1111 11 10000000000000        0001111234455555554332221 1222333


Q ss_pred             HHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc--------------------------chhHhhhhCCCcccccccc
Q 013328          190 QVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------------HVYKFLRSQGFVSSYDTAH  243 (445)
Q Consensus       190 q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------------~~~~~l~~~g~~d~~~~~~  243 (445)
                      .....................+.+++|++|..+..                          ..+..+.+.|+.|+|...+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  203 (268)
T d1akoa_         124 AKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHAN  203 (268)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBTTSCHHHHHHHHHHHHTTEEEHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhcCCcEEEEeecccCcchhhhhhhhhcccccccccccCCCHHHHHHHHHHHcCCCcceeeecC
Confidence            33333332222222223366789999999976432                          1344556788999998876


Q ss_pred             cCCCCCCCcceeccCC---CCcccccceeeecCCc
Q 013328          244 QYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  275 (445)
Q Consensus       244 ~~~~~~~~t~~~~~~~---~~~~~rIDyi~~~~~~  275 (445)
                      +.... .++|......   .....||||||+++..
T Consensus       204 ~~~~~-~~~~~~~~~~~~~~~~g~RIDyI~~s~~l  237 (268)
T d1akoa_         204 PQTAD-RFSWFDYRSKGFDDNRGLRIDLLLASQPL  237 (268)
T ss_dssp             TTCCS-CCSBCCTTTTHHHHTCCBCCEEEEEEHHH
T ss_pred             CCccc-cccccCCccccccCCCccEEEEEEeChHH
Confidence            54332 2333333211   1124699999997653

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.51  E-value=1.1e-14  Score=102.88  Aligned_cols=63  Identities=33%  Similarity=0.590  Sum_probs=59.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ++++++|+.||+|++ |+|+.+||+.+++.+|     .++++++++.+++.+|.|+||.|+|+||++.|
T Consensus         3 eel~~aF~~fD~d~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           3 EEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            578999999999999 9999999999999999     88999999999999999999999999999643

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.49  E-value=2.2e-14  Score=104.41  Aligned_cols=66  Identities=20%  Similarity=0.400  Sum_probs=61.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++++++|+.||+|++ |+|+..||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||++.|.
T Consensus         7 ~eeel~~~F~~fD~~~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~   72 (75)
T d1jc2a_           7 SEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME   72 (75)
T ss_dssp             CHHHHHHHHHHHCCSTT-SSEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCc-CeEcHHHHHHHHHhcC-----CCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            34679999999999999 9999999999999999     889999999999999999999999999997653

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.48  E-value=2.4e-14  Score=99.75  Aligned_cols=61  Identities=25%  Similarity=0.421  Sum_probs=58.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  368 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~  368 (445)
                      ++++++|+.||++++ |+|+..||+.+|+.+|     .++++.+++.|++.+|.|++|.|+|+||++
T Consensus         1 Eel~~aF~~fD~~~~-G~I~~~el~~~l~~~g-----~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCC-SCEEHHHHHHHHHHTT-----CCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCC-CeEeHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            368899999999999 9999999999999999     889999999999999999999999999984

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.47  E-value=4.7e-14  Score=104.30  Aligned_cols=69  Identities=22%  Similarity=0.345  Sum_probs=63.8

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+++++|+.||.|++ |+|+..||+.+|+.+|     .++++++++.++..+|.|++|.|+|+||+..|..
T Consensus        10 ~~~i~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          10 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCC-CeEchhHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4556789999999999999 9999999999999999     8899999999999999999999999999976643

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.47  E-value=4.4e-14  Score=104.49  Aligned_cols=69  Identities=22%  Similarity=0.331  Sum_probs=63.7

Q ss_pred             hhccchHHHhccccccCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          298 RRASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+++++|+.||.|+ + |.|+..||+.+|+.+|     ..+++++++++++++|.|+||.|+|+||+..|.+
T Consensus        11 ~eq~~~~~~~F~~fD~d~~~-G~I~~~el~~~l~~lg-----~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          11 EEQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHHHHTTTCTT-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCC-CeEeHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            566788999999999995 8 9999999999999999     8899999999999999999999999999976654

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.47  E-value=4.9e-14  Score=100.19  Aligned_cols=63  Identities=21%  Similarity=0.371  Sum_probs=59.4

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++++|+.+|.|++ |+|+..||+.+|+.+|     ..+++++++.+++.+|.|+||.|+|+||+..|.
T Consensus         2 ~~r~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~   64 (67)
T d1tiza_           2 SAKRVFEKFDKNKD-GKLSLDEFREVALAFS-----PYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSS-SCEEHHHHHHHHHHTC-----TTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             hHHHHHHHHCCCCc-CcCcHHHHHHHHHHhc-----cccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            47899999999999 9999999999999999     889999999999999999999999999997654

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.46  E-value=5.4e-14  Score=103.01  Aligned_cols=68  Identities=25%  Similarity=0.364  Sum_probs=62.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT  373 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~  373 (445)
                      ..++++++|+.||.|++ |+|+.+||+.+|+.+|     .+++.++++.+++.+|.|++|.|+|+||++.|...
T Consensus         7 ~~e~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_           7 SREEILKAFRLFDDDNS-GTITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCC-CEechHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence            34678999999999999 9999999999999999     88999999999999999999999999999776543

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=6.3e-14  Score=102.66  Aligned_cols=67  Identities=25%  Similarity=0.418  Sum_probs=62.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+++++|+.||.|++ |+|+..||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..|.
T Consensus         7 eqi~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_           7 EQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCCCC-CeEChHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            445679999999999999 9999999999999999     889999999999999999999999999996553

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.45  E-value=5.2e-14  Score=104.03  Aligned_cols=64  Identities=20%  Similarity=0.432  Sum_probs=60.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...++++|+.||.|++ |+|+..||+.+|+.+|     .++++++++.++..+|.|+||+|+|+||++.|
T Consensus        14 ee~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m   77 (81)
T d1fi5a_          14 EEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFM   77 (81)
T ss_dssp             HHHHHHHHHHHCSSCS-SEECHHHHHHHHHTSS-----SCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcccHHHHHHHHHhcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            3578999999999999 9999999999999999     88999999999999999999999999999755

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.45  E-value=1.9e-14  Score=102.48  Aligned_cols=64  Identities=31%  Similarity=0.458  Sum_probs=59.4

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++|+.||.+++ |+|+.+||+.+|+.+|     . ++++++++.|++.+|.|+||.|+|+||++.|.
T Consensus         2 eel~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           2 EEILRAFKVFDANGD-GVIDFDEFKFIMQKVG-----EEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHSCSGG-GEECHHHHHHHSSTTT-----TCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCc-CeEcHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            468999999999999 9999999999999998     5 47999999999999999999999999997654

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.43  E-value=6.4e-14  Score=101.42  Aligned_cols=67  Identities=25%  Similarity=0.429  Sum_probs=62.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +...+++++|+.||.|++ |+|+..||+.+|..+|     ..+++++++.+++.+|.|++|.|+|+||+..|.
T Consensus         5 eei~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           5 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHHHHHTCTTSS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCC-ceEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            445789999999999999 9999999999999999     889999999999999999999999999997653

>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Salivary nitrophorin
species: Bedbug (Cimex lectularius) [TaxId: 79782]

Probab=99.43  E-value=3.2e-14  Score=131.19  Aligned_cols=159  Identities=11%  Similarity=0.009  Sum_probs=85.0

Q ss_pred             CceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHhcCCCcE--EEEeecccCh------hhHHHHHHHHhh
Q 013328           28 PCITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLLYERSSI--ICLQEFWVGN------EELVDMYEKRLS   99 (445)
Q Consensus        28 ~~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~~~~~DI--I~LQEv~~~~------~~~~~~l~~~l~   99 (445)
                      -+|+|+||||.+.. ..         .       ....+++.|.+.+|||  |||||+....      ..+...+...+.
T Consensus         5 ~~v~I~TwNv~~~~-~~---------~-------~~~~~l~~i~~~~pDI~vI~lQE~~~~~~~~~~~~~~~~~~~~~~~   67 (280)
T d2imqx1           5 LSVHTVSWNSGHER-AP---------T-------NLEELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSLLT   67 (280)
T ss_dssp             EEEEEEEEEEETCC-CC---------S-------CCHHHHTCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHHHHH
T ss_pred             eEEEEEEECCCCCc-CC---------c-------CHHHHhcccccCCCCEEEEEeEecCccccccchhHHHHHHHHHHhc
Confidence            46999999996431 00         0       2367888889999997  9999995332      123444555566


Q ss_pred             ccCccEEEecCCCCCCceEEEEEecCcceEEe----eEEEEecCC-CCceeeeecccccccccccccCCCCceEEEEEee
Q 013328          100 DAGYVNFKLARTNNRGDGLLTAVHKDYFRVVN----YRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTH  174 (445)
Q Consensus       100 ~~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~n~H  174 (445)
                      ..+|......  ...+.|++++.+.. .....    .....+... ....+.           .+++...+..+.++|+|
T Consensus        68 ~~~y~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~i~~~~~~~in~h  133 (280)
T d2imqx1          68 SKGYTKLKNT--ITETMGLTVYCLEK-HLDQNTLKNETIIVTVDDQKKSGGI-----------VTSFTIYNKRFSFTTSR  133 (280)
T ss_dssp             HTTEEEEEEE--ECSSEEEEEEEEGG-GCCTTTCCCEEEEEECSTTSCSEEE-----------EEEEEETTEEEEEEEEE
T ss_pred             cCCeeEEEee--eeeceEEEEEEccc-ccccceecceeEeccCCcccCCcEE-----------EEEEEECCEEEEeeccc
Confidence            6677765542  23445788886554 11110    001111110 111111           12333467899999999


Q ss_pred             eeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcCc
Q 013328          175 LLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG  224 (445)
Q Consensus       175 L~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s  224 (445)
                      +.......  ..|..+...+ ...    ........++|++||||..+..
T Consensus       134 l~~~~~~~--~~~~~~~~~~-~~~----~~~~~~~~~vi~~GD~N~~~~~  176 (280)
T d2imqx1         134 MSDEDVTS--TNTKYAYDTR-LDY----SKKDDPSDFLFWIGDLNVRVET  176 (280)
T ss_dssp             CCTTCCCT--TSSSSSCCGG-GCT----TSSSSCCSEEEEEEECSCCBCS
T ss_pred             CCccchhH--HHHHHHHHHh-hhh----hhhccCCCeeEEeccccccccc
Confidence            97644221  1111111111 000    1112245679999999987654

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.41  E-value=1.3e-13  Score=101.81  Aligned_cols=66  Identities=21%  Similarity=0.412  Sum_probs=60.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +...+++++|+.||.|++ |+|+..||+.+|+.+|     . +++++++.++..+|.|+||.|+|+||+..+.
T Consensus         3 ee~~e~~~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~-~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~   68 (81)
T d2opoa1           3 QDIADRERIFKRFDTNGD-GKISSSELGDALKTLG-----S-VTPDEVRRMMAEIDTDGDGFISFDEFTDFAR   68 (81)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHTTT-----T-CCHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHhh-----c-CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            345788999999999999 9999999999999998     4 6889999999999999999999999997553

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=4e-13  Score=99.87  Aligned_cols=77  Identities=17%  Similarity=0.299  Sum_probs=69.9

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHH
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      +.++..+...+......+.++|+.+|.+++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|.||
T Consensus         5 ~ei~~~l~~~i~~~~~~l~~~F~~~D~~~~-G~i~~~ef~~~l~~~~-----~~l~~~e~~~l~~~~d~~~~g~I~y~eF   78 (83)
T d1wlza1           5 RDILARLHKAVTSHYHAITQEFENFDTMKT-NTISREEFRAICNRRV-----QILTDEQFDRLWNEMPVNAKGRLKYPDF   78 (83)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTSCBCTTSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-ceEChhHHHHHHHHhC-----CCCChhHHHHHhhccccCCCCcEeHHHH
Confidence            456666666666778899999999999999 9999999999999999     7899999999999999999999999999


Q ss_pred             HHH
Q 013328          367 QQR  369 (445)
Q Consensus       367 ~~~  369 (445)
                      +..
T Consensus        79 l~~   81 (83)
T d1wlza1          79 LSR   81 (83)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            964

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.38  E-value=7.3e-14  Score=104.63  Aligned_cols=67  Identities=30%  Similarity=0.470  Sum_probs=61.9

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .+....++++|+.||+|++ |+|+..||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+..|
T Consensus        19 ~~~i~~l~~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          19 EEEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSSTTTTTTHHHHHCTTCS-SCEEHHHHHHHHHTTT-----SSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            4555678999999999999 9999999999999999     88999999999999999999999999998544

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.37  E-value=4.4e-13  Score=104.73  Aligned_cols=70  Identities=24%  Similarity=0.396  Sum_probs=61.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....++++|+.||+|++ |+|+.+||+.+|+.++.  ....+++++++.+++.+|.|+||.|+|+||++.|.
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~l~~--~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d5pala_          38 KTDAQVKEVFEILDKDQS-GFIEEEELKGVLKGFSA--HGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCS-SEECHHHHHTHHHHHCT--TCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CCHHHHHHHHhhhcCCCC-CeEcHHHHHHHHHHhhh--ccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            344689999999999999 99999999999998731  11568999999999999999999999999997664

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.32  E-value=7.1e-13  Score=103.51  Aligned_cols=81  Identities=22%  Similarity=0.334  Sum_probs=65.6

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHH
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      ..|+.++.. .......++++|+.||.|++ |+|+.+||+.+|+.++.  ....+++++++.|++.+|.|+||.|+|+||
T Consensus        27 ~EF~~~~~~-~~~~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~l~~--~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF  102 (109)
T d1pvaa_          27 KKFFALVGL-KAMSANDVKKVFKAIDADAS-GFIEEEELKFVLKSFAA--DGRDLTDAETKAFLKAADKDGDGKIGIDEF  102 (109)
T ss_dssp             HHHHHHHTC-TTSCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCT--TCCCCCHHHHHHHHHHHCTTCSSSBCHHHH
T ss_pred             HHHHHHHHH-ccCCHHHHHHHhhCccCCCc-CeEcHHHHHHHHHHhhh--cCCCCCHHHHHHHHHHHCCCCcCcEeHHHH
Confidence            455554432 23445678999999999999 99999999999998731  115689999999999999999999999999


Q ss_pred             HHHHh
Q 013328          367 QQRIW  371 (445)
Q Consensus       367 ~~~~~  371 (445)
                      +++|.
T Consensus       103 ~~~m~  107 (109)
T d1pvaa_         103 ETLVH  107 (109)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97664

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.28  E-value=2.5e-12  Score=100.06  Aligned_cols=79  Identities=24%  Similarity=0.376  Sum_probs=65.2

Q ss_pred             HHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHH
Q 013328          288 AVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       288 ~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~  367 (445)
                      .|+..+. +......+++++|+.||+|++ |+|+..||+.+|+.++.  ....+++++++.+++.+|.|+||+|+|+||+
T Consensus        27 eF~~~~~-l~~~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~l~~--~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~  102 (107)
T d2pvba_          27 EFFAKVG-LASKSLDDVKKAFYVIDQDKS-GFIEEDELKLFLQNFSP--SARALTDAETKAFLADGDKDGDGMIGVDEFA  102 (107)
T ss_dssp             HHHHHHT-GGGSCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCT--TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHh-cccCCHHHHHHHHHhhccCCC-CcCcHHHHHHHHHHhhc--ccccCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            3444433 224455789999999999999 99999999999999861  2256899999999999999999999999999


Q ss_pred             HHH
Q 013328          368 QRI  370 (445)
Q Consensus       368 ~~~  370 (445)
                      .+|
T Consensus       103 ~~m  105 (107)
T d2pvba_         103 AMI  105 (107)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.27  E-value=1.3e-12  Score=95.19  Aligned_cols=66  Identities=18%  Similarity=0.282  Sum_probs=56.3

Q ss_pred             ccchHHHhccccccC--CCCCcccHHHHHHHHHHhccCCCCCCCC--HHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLA--DEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~--~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++++++|+.||.+  ++ |+|+.+||+.+|+.+|     .+++  +.+++++++.+|.|+||.|+|+||+.+|.
T Consensus         3 s~eel~~~F~~fd~~~~~~-G~I~~~El~~~l~~lg-----~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~   72 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDP-NQISKEELKLVMQTLG-----PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK   72 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCT-TSEEHHHHHHHHHHHG-----GGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCC-CEECHHHHHHHHHHhC-----CcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHH
Confidence            346799999999654  56 9999999999999998     4444  45799999999999999999999997653

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.26  E-value=6.6e-12  Score=98.11  Aligned_cols=81  Identities=23%  Similarity=0.388  Sum_probs=65.9

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHH
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  366 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF  366 (445)
                      ..|+..+. +.......++.+|+.||+|++ |+|+.+||+.+|+.++.  ....+++++++.|++.+|.|+||+|+|+||
T Consensus        27 ~eF~~~~~-~~~~~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~l~~--~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF  102 (109)
T d1rwya_          27 KKFFQMVG-LKKKSADDVKKVFHILDKDKS-GFIEEDELGSILKGFSS--DARDLSAKETKTLMAAGDKDGDGKIGVEEF  102 (109)
T ss_dssp             HHHHHHHT-GGGSCHHHHHHHHHHHSTTCS-SEECHHHHHTHHHHHCT--TCCCCCHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred             HHHHHHHc-cccCCHHHHHHHhhcccCCCC-CcCcHHHHHHHHHHhcc--ccccCCHHHHHHHHHHhCCCCCCeEeHHHH
Confidence            44444432 224456788999999999999 99999999999999862  124588999999999999999999999999


Q ss_pred             HHHHh
Q 013328          367 QQRIW  371 (445)
Q Consensus       367 ~~~~~  371 (445)
                      ++.|.
T Consensus       103 ~~~m~  107 (109)
T d1rwya_         103 STLVA  107 (109)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97664

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.25  E-value=2.1e-12  Score=100.70  Aligned_cols=70  Identities=27%  Similarity=0.437  Sum_probs=61.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......++++|+.||+|++ |+|+.+||+.+|..++-  ....+++++++.+++.+|.|+||.|+|+||+..|
T Consensus        37 ~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~l~~--~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m  106 (108)
T d1rroa_          37 KMSASQVKDIFRFIDNDQS-GYLDGDELKYFLQKFQS--DARELTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCS-SEECTHHHHTGGGGTCT--TSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             cCCHHHHHHHHhhhcCCCC-CeEcHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            4455789999999999999 99999999999998851  1256899999999999999999999999999765

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=99.24  E-value=7.2e-12  Score=94.82  Aligned_cols=74  Identities=16%  Similarity=0.150  Sum_probs=61.0

Q ss_pred             hhccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......+.++|+.| |+||++|+|+.+||+.+|+.++......+.++++++++|+.+|.|+||.|+|+||+..|.
T Consensus         5 E~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~   79 (93)
T d1zfsa1           5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA   79 (93)
T ss_dssp             HHHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            34567889999888 888743899999999999998632223457889999999999999999999999997663

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.17  E-value=2.3e-11  Score=99.99  Aligned_cols=78  Identities=19%  Similarity=0.331  Sum_probs=66.5

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..|+..+...+  ......+.++|+.||.|++ |+|+.+||+.+|..+|     .++++++++.+++.+|.| +|+|+|+
T Consensus        59 ~eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~lt~~e~~~l~~~~d~~-~G~I~y~  131 (142)
T d1wdcb_          59 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQET-KKLNIEYIKDLLENMG-----DNFNKDEMRMTFKEAPVE-GGKFDYV  131 (142)
T ss_dssp             HHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHCCEE-TTEECHH
T ss_pred             ccccccccccccccchhhhHHHhhhhhcccCC-CcccHHHHHHHHHHcc-----ccCCHHHHHHHHHHhCCC-CCEEcHH
Confidence            44555555444  3345789999999999999 9999999999999999     889999999999999998 6999999


Q ss_pred             HHHHHHh
Q 013328          365 EFQQRIW  371 (445)
Q Consensus       365 eF~~~~~  371 (445)
                      ||++.|.
T Consensus       132 eF~~~l~  138 (142)
T d1wdcb_         132 KFTAMIK  138 (142)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9997663

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.16  E-value=5.6e-12  Score=91.94  Aligned_cols=69  Identities=16%  Similarity=0.239  Sum_probs=56.7

Q ss_pred             hccchHHHhcccccc-C-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKA-D-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~-~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+++.+|+.||. + ++ |+|+.+||+.+|+.+...   ...+++++++||..+|.|+||.|+|+||+..|.
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~-g~is~~Elk~ll~~~~~~---~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~   74 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFPS---LLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK   74 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSST-TEECHHHHHHHHHHHCSS---CCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCC-CEECHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            345789999999975 3 45 899999999999998310   345667799999999999999999999996653

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=99.16  E-value=3.1e-11  Score=90.95  Aligned_cols=73  Identities=15%  Similarity=0.080  Sum_probs=57.7

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.++|+.| |.||++|+|+.+||+.+|+..+........+++++++||+.+|.|+||.|+|+||+..|.
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~   79 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   79 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Confidence            4456788999998 677763579999999999874200001567899999999999999999999999996653

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.14  E-value=6.6e-11  Score=98.37  Aligned_cols=81  Identities=19%  Similarity=0.377  Sum_probs=67.7

Q ss_pred             HHHHHHHHHhh---hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC--CCcee
Q 013328          287 EAVFGMFKCLL---RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVV  361 (445)
Q Consensus       287 ~~v~~~~~~~~---~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~--~~g~i  361 (445)
                      ..|+..+....   .....++.++|+.||.+++ |+|+.+||+.+|..+|     .++++++++.+++.+|.+  ++|.|
T Consensus        64 ~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~-G~I~~~el~~~l~~~g-----~~ls~~e~~~l~~~~d~~~d~~G~I  137 (152)
T d1wdcc_          64 EEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQ-GFISGAELRHVLTALG-----ERLSDEDVDEIIKLTDLQEDLEGNV  137 (152)
T ss_dssp             HHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHTCCCCTTSEE
T ss_pred             cccccccccccccchhHHHhhhhhhhccccccC-ccchHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCCCEE
Confidence            44555555544   2344679999999999999 9999999999999999     889999999999999864  56899


Q ss_pred             eHHHHHHHHhcc
Q 013328          362 DYKEFQQRIWKT  373 (445)
Q Consensus       362 ~~~eF~~~~~~~  373 (445)
                      +|+||++.|...
T Consensus       138 ~y~eF~~~~~~~  149 (152)
T d1wdcc_         138 KYEDFVKKVMAG  149 (152)
T ss_dssp             EHHHHHHHHHHC
T ss_pred             EHHHHHHHHhcC
Confidence            999999888653

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.13  E-value=5.7e-11  Score=98.03  Aligned_cols=64  Identities=20%  Similarity=0.413  Sum_probs=59.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ....+..+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.+++.+| |+||+|+|+||++.|
T Consensus        81 ~~~~~~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m  144 (146)
T d1lkja_          81 SEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDDMLREVS-DGSGEINIQQFAALL  144 (146)
T ss_dssp             HHHHHHHHHHHHCSSSS-CEEEHHHHHHHHHHHT-----CSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CcccHHHHHHHHHhcc-CCCCeEeHHHHHHHh
Confidence            34678999999999999 9999999999999999     8899999999999999 999999999999655

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.13  E-value=4.5e-12  Score=104.77  Aligned_cols=121  Identities=17%  Similarity=0.233  Sum_probs=100.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      +...+++++|..+|.|++ |+|+.+||+.+|..+|     ..++..+++.++..+|.+++|.|+|+||+..+..      
T Consensus         6 ~e~~~l~~~F~~~D~~~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   79 (146)
T d1exra_           6 EQIAEFKEAFALFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD   79 (146)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCC-CeECHHHHHHHHHhcC-----CCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccC
Confidence            345679999999999999 9999999999999999     7899999999999999999999999999976632      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                           ..++...|.+..|.+...+.......+|..++...     +..  +...+|.+.+|+|+.
T Consensus        80 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-----~~~--i~~~~D~d~dG~i~~  137 (146)
T d1exra_          80 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDE--MIREADIDGDGHINY  137 (146)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCSSSSSSBCH
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHH-----HHH--HHHHhCCCCCCeEeH
Confidence                 23556678888999999888777777887665443     333  667889999999863

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.13  E-value=3.2e-12  Score=103.91  Aligned_cols=112  Identities=14%  Similarity=0.129  Sum_probs=82.6

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----------
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----------  373 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----------  373 (445)
                      ++.+|+.+|.|++ |.|+.+||+.+|..+|     ...++++++.++..+|.+++|.|+|+||++.+...          
T Consensus         2 ae~~F~~~D~d~d-G~is~~E~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~   75 (134)
T d1jfja_           2 AEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHHHCTTCS-SEEEHHHHHHHHHTTC-----CSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHHHcCCCc-CCCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence            4679999999999 9999999999999999     77889999999999999999999999999755321          


Q ss_pred             ---CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          374 ---TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       374 ---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                         ..+...+.+..|.+...+........|.         +.+..  +...+|.+.+|+|+.
T Consensus        76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~~~---------~~~~~--~~~~~D~d~dG~is~  126 (134)
T d1jfja_          76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---------EKVAE--QVMKADANGDGYITL  126 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC---------HHHHH--HHHHHHCSSSSEEEH
T ss_pred             cccccccccccccCCcccHHHHHHHHHhcCc---------HHHHH--HHHHHCCCCCCCCCH
Confidence               1223344555555555554333333332         22332  345678888998874

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=99.13  E-value=4.4e-11  Score=89.84  Aligned_cols=72  Identities=14%  Similarity=0.099  Sum_probs=58.6

Q ss_pred             hccchHHHhcccc-ccCCCCC-cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFL-KADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.| |++|+ | +|+.+||+++|+...-.......++.+++++|+.+|.|+||.|+|+||+..|.
T Consensus         6 ~~i~~i~~vF~kya~~dGd-~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~   79 (93)
T d1ksoa_           6 QAVAAIVCTFQEYAGRCGD-KYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA   79 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcCCC-CCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            4456788899887 99999 7 69999999999986411112446788999999999999999999999996653

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=3.5e-11  Score=99.37  Aligned_cols=68  Identities=22%  Similarity=0.404  Sum_probs=63.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .....+.++|+.+|.+++ |.|+.+||+.+|..+|     .++++++++.++..+|.|+||.|+|+||++.|++
T Consensus        78 ~~~~~l~~~F~~~D~~~~-G~I~~~el~~~l~~~g-----~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~  145 (146)
T d1m45a_          78 AKTEDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  145 (146)
T ss_dssp             CCTHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHST-----TCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             chHHHHHHHHHhhccccc-cccchhhhhhhhcccC-----CcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            344679999999999999 9999999999999999     7899999999999999999999999999987764

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=99.12  E-value=2.7e-11  Score=92.24  Aligned_cols=70  Identities=13%  Similarity=0.115  Sum_probs=56.9

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.++|+.| |.+|++|+|+..||+.+|+.++..   ...++++++++|..+|.|+||.|+|+||+..|.
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~---~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~   81 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPH---LLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIG   81 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTT---TTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccc---cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            3456788899888 777744999999999999987511   234666799999999999999999999997663

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.12  E-value=3.1e-11  Score=98.95  Aligned_cols=65  Identities=23%  Similarity=0.368  Sum_probs=60.5

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+.++|+.+|.+++ |+|+.+||+.+|..+|     .++++++++.+++.+|.+ ||.|+|+||++.|..
T Consensus        75 ~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          75 PEEFVKGFQVFDKDAT-GMIGVGELRYVLTSLG-----EKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHHHHHTTCSSCS-SCCCHHHHHHHHHHHH-----SCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHHHHHHHhccCC-CcchHHHHHHHHHHcC-----CCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            4568999999999999 9999999999999999     889999999999999998 999999999987753

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=7.3e-11  Score=88.99  Aligned_cols=64  Identities=20%  Similarity=0.309  Sum_probs=58.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +....++++|+.+|+|++ |+|+.+|++.+|...|       ++.+++.+|+..+|.|++|.|+|+||+.++
T Consensus         6 ee~~~y~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~   69 (92)
T d1fi6a_           6 EQRQYYVNQFKTIQPDLN-GFIPGSAAKEFFTKSK-------LPILELSHIWELSDFDKDGALTLDEFCAAF   69 (92)
T ss_dssp             HHHHHHHHHHTTTCCSTT-CEEEHHHHHHHHHHHS-------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcc-cchhHHHHHHHHHHcc-------CCHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence            345678899999999999 9999999999999988       778999999999999999999999998544

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=99.11  E-value=1.9e-11  Score=91.90  Aligned_cols=71  Identities=17%  Similarity=0.095  Sum_probs=56.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.+|.| + |+|+.+||+.+|....-.......++++++++|+.+|.|+||+|+|+||+..|.
T Consensus         6 ~~ie~l~~~F~~yd~d-d-G~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~   76 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-K-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA   76 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-G-CSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-C-CEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence            4567789999999977 8 999999999999874200000345677899999999999999999999996663

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.2e-11  Score=91.54  Aligned_cols=64  Identities=14%  Similarity=0.214  Sum_probs=58.5

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +....++++|+.+|+|++ |+|+.+|++.+|...|       ++.+++++++..+|.|+||.|+|+||+.+|
T Consensus         7 ~e~~~~~~~F~~~D~d~~-G~is~~e~~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~l~~~EF~~am   70 (95)
T d1c07a_           7 AEKAKYDEIFLKTDKDMD-GFVSGLEVREIFLKTG-------LPSTLLAHIWSLCDTKDCGKLSKDQFALAF   70 (95)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHTTT-------CCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHhcC-------CCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            344678899999999999 9999999999999988       789999999999999999999999998665

>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.10  E-value=2.8e-10  Score=107.57  Aligned_cols=166  Identities=14%  Similarity=0.137  Sum_probs=88.7

Q ss_pred             ceEEEeeccccccccCCCCccccCCCccCChhhHHHHHHHHHh---cCCCcE--EEEeeccc--------Ch----hhHH
Q 013328           29 CITCTTFNILAPIYKRLSNENCRESDCRAYWFGRNQRILDWLL---YERSSI--ICLQEFWV--------GN----EELV   91 (445)
Q Consensus        29 ~lrvlT~NV~~~~~~~~~~~~~~~~~~~~~w~~R~~~i~~~I~---~~~~DI--I~LQEv~~--------~~----~~~~   91 (445)
                      ++.|+||||.+..        .  +          ..+.++|.   ...|||  |||||+..        ..    ..+.
T Consensus        26 ~I~v~TWNv~~~~--------~--~----------~~l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~~~~~~~~~~w~   85 (345)
T d1i9za_          26 KIFVASYNLNGCS--------A--T----------TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRREWE   85 (345)
T ss_dssp             EEEEEEEECTTCC--------C--C----------SCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHHHHH
T ss_pred             EEEEEEEcCCCcc--------C--C----------cchHHhhccCCCCCCCEEEEEcccCCccchhhhcccCchhhHHHH
Confidence            5778999997431        0  0          12445663   445898  88999721        11    1223


Q ss_pred             HHHHHHhh-----ccCccEEEecCCCCCCceEEEEEecCcceEEeeEEEEecCCCCceeeeecccccccccccccCCCCc
Q 013328           92 DMYEKRLS-----DAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQ  166 (445)
Q Consensus        92 ~~l~~~l~-----~~gy~~~~~~~~~~~~~G~ai~~~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  166 (445)
                      ..+...+.     ..+|..+..  ..-.+.+++||+|.+..+.+..........+. .+..    ........++...+.
T Consensus        86 ~~~~~~~~~~~~~~~~Y~~v~~--~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~-~g~~----gnKGaV~vr~~i~~t  158 (345)
T d1i9za_          86 SCVKRLLNGKCTSGPGYVQLRS--GQLVGTALMIFCKESCLPSIKNVEGTVKKTGL-GGVS----GNKGAVAIRFDYEDT  158 (345)
T ss_dssp             HHHHHHHHHTCCSSCCEEEEEE--EEETTEEEEEEEEGGGGGGEEEEEEEEEECCC-C--------CCEEEEEEEEETTE
T ss_pred             HHHHHhccccccCCCCeEEEEE--ecccCcEEEEEEcchhccccccceeEEEecCc-CCcc----cCCceEEEEEEECCE
Confidence            33333332     235554433  22345688999887754433222221111110 0000    000011133444678


Q ss_pred             eEEEEEeeeeCCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCCcC
Q 013328          167 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR  223 (445)
Q Consensus       167 ~v~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~  223 (445)
                      .++++|+||.++.  .....|..+...+++.+............++|++||||...+
T Consensus       159 ~l~fvn~HL~ag~--~~~~~R~~~~~~i~~~l~~~~~~~~~~~d~v~~~GDlN~R~~  213 (345)
T d1i9za_         159 GLCFITSHLAAGY--TNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFGDFNYRIS  213 (345)
T ss_dssp             EEEEEEEECCCCS--SCHHHHHHHHHHHHHHCCCGGGCCTTSSSEEEEEEECCCCBS
T ss_pred             EEEEEEecccCcc--cchHHHHHHHHHHHHhhccccccccccCceeEEecccccccc
Confidence            8999999997743  445678888877776654322222234567999999997543

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.10  E-value=7.4e-11  Score=97.21  Aligned_cols=66  Identities=17%  Similarity=0.321  Sum_probs=60.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.++|+.+|.+++ |+|+.+||+.+|..+|     .++++++++.+++. |.|+||.|+|+||++.|+
T Consensus        78 ~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          78 GTFEDFVEGLRVFDKEGN-GTVMGAELRHVLATLG-----EKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             chHHHHHHHHHHhhcCCC-CEEcHHHHHHHHHHhC-----CCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence            445678999999999999 9999999999999999     88999999999975 889999999999998775

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=99.09  E-value=3.7e-11  Score=89.49  Aligned_cols=67  Identities=16%  Similarity=0.203  Sum_probs=58.0

Q ss_pred             hccchHHHhcccc-ccCCCCC-cccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFL-KADNDGD-YITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G-~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+..+|+.| |++|+ | +|+..||+.+++.   ++     ...++++++++|+++|.|+||.|+|+||+..|.
T Consensus         6 ~ai~~ii~vF~kya~~dg~-~~~ls~~Elk~Ll~~e~~~~-----~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~   77 (89)
T d1k8ua_           6 QAIGLLVAIFHKYSGREGD-KHTLSKKELKELIQKELTIG-----SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLG   77 (89)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTEEEHHHHHHHHHHHSCCG-----GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCC-CCeecHHHHHHHHHHHHHhh-----ccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence            4556788899888 99999 7 7999999999997   34     556788999999999999999999999997663

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.08  E-value=6.9e-12  Score=107.86  Aligned_cols=120  Identities=14%  Similarity=0.152  Sum_probs=94.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cC
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  374 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~  374 (445)
                      ...++++++|+.+|.|++ |+|+.+||+.+|+.+|     ..+++.+++.++..+|.|++|.|+|+||+..+..    ..
T Consensus        15 ~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~l~-----~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~~~~~~   88 (182)
T d1y1xa_          15 NDNQELMEWFRAVDTDGS-GAISVPELNAALSSAG-----VPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMRE   88 (182)
T ss_dssp             CTTSCHHHHHHHHCTTCS-SSBCHHHHHHHHCBTT-----BCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCc-CCCCHHHHHHHHHHhc-----ccCchhhhhhhhcccccccccccccccccccccccccccc
Confidence            344679999999999999 9999999999999999     7899999999999999999999999999875532    33


Q ss_pred             ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          375 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                      .+...|.+..|.+...+.......+|..++...+     ..  ....+|.+.+|.|+
T Consensus        89 ~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~-----~~--i~~~~d~~~dg~I~  138 (182)
T d1y1xa_          89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTF-----QA--LMRKFDRQRRGSLG  138 (182)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHH-----HH--HHHHHCTTCSSSBC
T ss_pred             chhccccccchhhhhHHHHHHHHHhCCchhHHHH-----HH--HHhhcccCCCCCcC
Confidence            4566677888888888876666777776554442     21  33456666677654

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.08  E-value=1.5e-10  Score=95.29  Aligned_cols=66  Identities=26%  Similarity=0.500  Sum_probs=61.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....++.+|+.+|.|++ |.|+..||+.++..+|     ..+++++++.+++.+|.|+||.|+|+||++.|.
T Consensus        80 ~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          80 SEEELIEAFKVFDRDGN-GLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHh-----hcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            35678999999999999 9999999999999999     889999999999999999999999999998765

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.07  E-value=9.1e-11  Score=96.69  Aligned_cols=67  Identities=28%  Similarity=0.278  Sum_probs=62.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+.++|+.||.+++ |+|+.+||+.+|+.+|     .++++++++.+++.+|.|++|+|+|.||++.|..
T Consensus        75 ~~~~l~~aF~~fD~~~~-g~I~~~el~~~l~~~g-----~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGK-GSIKKSFLEELLTTGG-----GRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             hHHHHHHHHHhhhhccc-chhhHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            34578999999999999 9999999999999999     8899999999999999999999999999976643

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.3e-11  Score=101.21  Aligned_cols=120  Identities=13%  Similarity=0.165  Sum_probs=99.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-------
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-------  372 (445)
                      +..+++++|..+|.|++ |+|+..||..+++.+|     ..++.+.+..++..+|.+++|.|+++||+..+..       
T Consensus         4 ~~~elk~~F~~~D~~~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   77 (141)
T d2obha1           4 QKQEIREAFDLFDADGT-GTIDVKELKVAMRALG-----FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT   77 (141)
T ss_dssp             HHHHHHHHHHTTCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CeEeHHHHHHHHHhcC-----CchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhcc
Confidence            45689999999999999 9999999999999999     8899999999999999999999999999976632       


Q ss_pred             ----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                          ...+...+.+..|.+...+.......+|..++...     +..  +...+|.+.+|+|+.
T Consensus        78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e-----~~~--l~~~~D~d~dG~i~~  134 (141)
T d2obha1          78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-----LQE--MIDEADRDGDGEVSE  134 (141)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCTTSSSSBCH
T ss_pred             HHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHH-----HHH--HHHHHCCCCCCCEeH
Confidence                23456677888888888887776777887666554     333  556788889998863

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=99.04  E-value=2e-10  Score=84.85  Aligned_cols=72  Identities=13%  Similarity=0.097  Sum_probs=56.2

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.| +++|++++|+.+||+.+|+...-.-.....+++.++++|+.+|.|+||.|+|+||+..|
T Consensus         5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li   77 (87)
T d1e8aa_           5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV   77 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHH
Confidence            4557788899988 56666357999999999988430000134578899999999999999999999999655

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.6e-10  Score=92.32  Aligned_cols=66  Identities=26%  Similarity=0.425  Sum_probs=61.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+|.+++ |.|+..+|+.+|..+|     ..++++++..+|+.+|.|+||.|+|+||++.|
T Consensus        76 ~~~~~l~~~f~~~d~~~~-G~i~~~el~~~l~~~g-----~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          76 DTKEEILKAFKLFDDDET-GKISFKNLKRVAKELG-----ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhcccCC-CCccHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            344678999999999999 9999999999999999     88999999999999999999999999999754

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.01  E-value=8.1e-11  Score=98.22  Aligned_cols=66  Identities=20%  Similarity=0.438  Sum_probs=59.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.||.|++ |+|+.+||+.++..+|     ..+++++++.+++.+|.|+||.|+|+||++.|
T Consensus        88 ~~~~~l~~~F~~~D~d~~-G~I~~~e~~~~~~~~~-----~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l  153 (156)
T d1dtla_          88 KSEEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFM  153 (156)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEEEHHHHGGGGTTC-------CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCcCCC-CcCcHHHHHHHHhhcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            344678899999999999 9999999999999999     88999999999999999999999999999755

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=2e-10  Score=93.70  Aligned_cols=65  Identities=17%  Similarity=0.342  Sum_probs=57.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+.++|+.+|++++ |+|+.+||+.+|..+|     ..+++++++.++.. |.|+||.|+|+||++.|
T Consensus        74 ~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          74 GTYEDYLEGFRVFDKEGN-GKVMGAELRHVLTTLG-----EKMTEEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             ----CCHHHHHTTCTTSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             cHHHHHHHhhhhccCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            344668899999999999 9999999999999999     78999999999875 88999999999999865

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=99.00  E-value=3.2e-11  Score=89.52  Aligned_cols=68  Identities=15%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             hhccchHHHhcccc-ccCCCCCc-ccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFL-KADNDGDY-ITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~-D~~~~~G~-i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ......+..+|+.+ |+||+ |. ++.+||+.+|.. +|     ..+++++++++|+++|.|+||.|+|+||+..|.
T Consensus         6 E~ai~~ii~~F~kya~~dG~-~~~l~~~Elk~ll~~e~~-----~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~   76 (87)
T d1xk4a1           6 EKALNSIIDVYHKYSLIKGN-FHAVYRDDLKKLLETESP-----QYIRKKGADVWFKELDINTDGAVNFQEFLILVI   76 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSC-TTCBCHHHHHHHHHHHSC-----HHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCC-CCccCHHHHHHHHHHhcC-----CccchHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34556788899888 89999 75 599999999986 56     456677899999999999999999999996653

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.00  E-value=5.2e-11  Score=98.16  Aligned_cols=117  Identities=12%  Similarity=0.113  Sum_probs=90.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCC--CCceeeHHHHHHHHhc------
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~eF~~~~~~------  372 (445)
                      ..+++++|+.||.|++ |+|+.+||+.+|+.+|     ..++.+++..++..++.+  ++|.|+|+||+..+..      
T Consensus         3 ~eelke~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   76 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGD-AKITASQVGDIARALG-----QNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD   76 (145)
T ss_pred             HHHHHHHHHHHcCCCC-CeECHHHHHHHHHHhh-----hcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc
Confidence            4679999999999999 9999999999999999     779999999999988665  6899999999876632      


Q ss_pred             -------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          373 -------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       373 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                             ...+...|.+..|.+...|.......+|..++...+     ..  +.. .+.+.+|+++
T Consensus        77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~-----~~--l~~-~~~d~dG~I~  134 (145)
T d2mysc_          77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEV-----EE--LMK-GQEDSNGCIN  134 (145)
T ss_pred             cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHH-----HH--HHh-hcCCCCCeEE
Confidence                   123466688888888888887777778866554442     22  222 3446778764

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.98  E-value=6.4e-10  Score=93.19  Aligned_cols=66  Identities=20%  Similarity=0.443  Sum_probs=60.6

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++++|+.+|.|++ |+|+..||+.+|..+|     ...++++++.+|..+|.|+||.|+|+||++.|
T Consensus        93 ~~~~~~~~aF~~~D~d~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l  158 (162)
T d1topa_          93 KSEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM  158 (162)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHhhC-----CCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHH
Confidence            344567889999999999 9999999999999998     78999999999999999999999999999765

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=4e-10  Score=86.16  Aligned_cols=70  Identities=10%  Similarity=0.100  Sum_probs=53.8

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccC--CCCCCC---------CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLT--GHKHGL---------ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~--~~~~~~---------~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..++.+|+.+|.||+ |+|+.+||+.+|+.++-.  ......         ....++.+|..+|.|+||.|+|+||++.+
T Consensus        16 ~~~r~~F~~~D~Dgd-G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~   94 (99)
T d1snla_          16 FNPKTFFILHDINSD-GVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST   94 (99)
T ss_dssp             CCHHHHHHHHCSSCC-SEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred             cCHHHHHHHHCCCCC-CcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            457889999999999 999999999999875310  000001         12357889999999999999999999765


Q ss_pred             hc
Q 013328          371 WK  372 (445)
Q Consensus       371 ~~  372 (445)
                      -+
T Consensus        95 ~~   96 (99)
T d1snla_          95 QR   96 (99)
T ss_dssp             HC
T ss_pred             hc
Confidence            43

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.97  E-value=7.9e-11  Score=98.92  Aligned_cols=122  Identities=17%  Similarity=0.217  Sum_probs=99.1

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      .++..+++++|..+|+|++ |+|+.+||+.+|..++     ..+++.+++.++..+|.+++|.|+|.||+..+..     
T Consensus        16 ~~~i~el~~~F~~~D~d~~-G~Is~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~   89 (162)
T d1topa_          16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHHHHHHHHHTTTCSCS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCC-CeEcHHHHHHHHhccC-----CchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhh
Confidence            4666789999999999999 9999999999999999     7899999999999999999999999999865422     


Q ss_pred             ---------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeE
Q 013328          373 ---------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  432 (445)
Q Consensus       373 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (445)
                               ...+...|.+..|.+...+........|...+..     ++..  +.+.+|++.+|+|+.
T Consensus        90 ~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~-----~~~~--l~~~~D~d~dG~Is~  151 (162)
T d1topa_          90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE-----DIED--LMKDSDKNNDGRIDF  151 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHH-----HHHH--HHHHHCTTCSSSBCH
T ss_pred             cccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHH-----HHHH--HHHHhCCCCCCcEEH
Confidence                     2245677888889898888766666666554432     3344  667889999999863

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.96  E-value=1e-10  Score=100.38  Aligned_cols=121  Identities=17%  Similarity=0.188  Sum_probs=88.4

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccC---
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  374 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~---  374 (445)
                      .....+++++|+.+|.|++ |+|+.+||+.+|..+|     ..++..+++.++..+|.+++|.|+|+||+..+....   
T Consensus         6 ~~ei~~l~~~F~~~D~d~d-G~Is~~e~~~~l~~l~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   79 (182)
T d1s6ia_           6 EEEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLE   79 (182)
T ss_dssp             CTTTCSHHHHHHTTSSSSS-SCEEHHHHHHHHTTTT-----CCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSC
T ss_pred             HHHHHHHHHHHHHHcCCCc-CCCCHHHHHHHHHHcC-----CccccccchhhhhhhhccccccchHHHHHHHHHhhcccc
Confidence            3456789999999999999 9999999999999999     789999999999999999999999999996443211   


Q ss_pred             -------ccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          375 -------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       375 -------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                             .+...+.+..|.+...+........|+       ...++..  +...+|++.||+|+-.
T Consensus        80 ~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl-------~~~ev~~--~f~~~D~d~DG~Is~~  136 (182)
T d1s6ia_          80 REENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-------DDIHIDD--MIKEIDQDNDGQIDYG  136 (182)
T ss_dssp             CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-------CTTHHHH--HHHHHCSSSSSEEETT
T ss_pred             cHHHHHHHHHHHhhcCCCccchhhhhhhhhhcCc-------cHHHHHH--HHHHhhcCCCCeEeHH
Confidence                   122334445555555544433444442       1223333  4567889999998753

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=4.3e-11  Score=98.79  Aligned_cols=116  Identities=9%  Similarity=0.104  Sum_probs=89.7

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHH-HhcCCCCceeeHHHHHHHHhc---------
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV-QADIDGNGVVDYKEFQQRIWK---------  372 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~-~~d~~~~g~i~~~eF~~~~~~---------  372 (445)
                      .++++|+.||.|++ |+|+.+||+.+|+.+|     ..+++++++.++. ..+.+.+|.|+|+||+..+..         
T Consensus         3 ~~k~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~   76 (146)
T d1m45a_           3 ANKDIFTLFDKKGQ-GAIAKDSLGDYLRAIG-----YNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATT   76 (146)
T ss_dssp             CCTTCHHHHCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGG
T ss_pred             HHHHHHHHHcCCCc-CCCCHHHHHHHHHHcC-----CchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccc
Confidence            35789999999999 9999999999999999     7799999999996 456667899999999976632         


Q ss_pred             -------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          373 -------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       373 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                             ...+...|.+..|.+...+.......+|..++..     ++..  +...+|.+.+|.++
T Consensus        77 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~-----ei~~--l~~~~D~d~dG~I~  135 (146)
T d1m45a_          77 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA-----EVDE--LLKGVEVDSNGEID  135 (146)
T ss_dssp             CCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHH-----HHHH--HHTTCCCCTTSEEE
T ss_pred             cchHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHH-----HHHH--HHHHhCCCCCCcEE
Confidence                   1125677788888888888777777788755433     3343  55679999999875

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.95  E-value=4.2e-10  Score=96.83  Aligned_cols=65  Identities=15%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..+..+|+.+|.|++ |+|+.+||+.++..+|     ..+++++++.+|+.+|.|+||.|+|+||++.+..
T Consensus       107 ~~~~~~F~~~D~d~~-G~is~~E~~~~l~~~g-----~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         107 EWGDAVFDIFDKDGS-GTITLDEWKAYGKISG-----ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHHTC-----CEECHHHHHHHHHHHS-----SCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-CcccchhhHHHHHhcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            356678999999999 9999999999999999     7799999999999999999999999999977743

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.95  E-value=3.9e-11  Score=98.37  Aligned_cols=113  Identities=10%  Similarity=0.058  Sum_probs=87.2

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-------
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-------  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-------  373 (445)
                      ...++++|..||.|++ |+|+.+||+.+|+.+|     ..++.+++..+    +.+++|.|+|+||++.+...       
T Consensus         4 ~~~fke~F~~~D~d~d-G~I~~~el~~~l~~lg-----~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~   73 (140)
T d1ggwa_           4 DSPYKQAFSLFDRHGT-GRIPKTSIGDLLRACG-----QNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPG   73 (140)
T ss_dssp             CTTTHHHHHHTCSSSS-SEECHHHHHHHHHHTS-----CCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSC
T ss_pred             HHHHHHHHHHHCCCCC-CeECHHHHHHHHHHHH-----hhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhh
Confidence            4567999999999999 9999999999999999     78998887654    67889999999999777431       


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                            ..+...|.+..|.++..+.......+|..++...     +..  ....+|.+ +|+++
T Consensus        74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e-----~~~--l~~~~d~~-dG~I~  129 (140)
T d1ggwa_          74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE-----MDE--LLKGVPVK-DGMVN  129 (140)
T ss_dssp             CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHH-----HHH--HHHHTTCS-SCCST
T ss_pred             HHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHH-----HHH--HHHhhCCC-CCEEe
Confidence                  1245668888888888887777777776655443     232  33456766 78764

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=5.2e-10  Score=84.56  Aligned_cols=63  Identities=19%  Similarity=0.296  Sum_probs=56.7

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +....++++|+.+| +++ |+|+.+|++.+|.+.|       ++.+++++|+..+|.|++|.|+|+||+..+
T Consensus         7 ee~~~y~~~F~~~D-~~~-G~i~~~el~~~l~~~g-------l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~   69 (95)
T d2jxca1           7 EDKAKYDAIFDSLS-PVN-GFLSGDKVKPVLLNSK-------LPVDILGRVWELSDIDHDGMLDRDEFAVAM   69 (95)
T ss_dssp             HHHHHHHHHHHHTC-CBT-TEEEHHHHHHHHTTSS-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-CCC-CceeHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCeEcHHHHHHHH
Confidence            34467899999999 899 9999999999999888       778999999999999999999999998544

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.5e-10  Score=96.89  Aligned_cols=105  Identities=16%  Similarity=0.104  Sum_probs=84.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTW  375 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~  375 (445)
                      ....+++.|..++ ++| |.|+..||+.+|+.+|+......++.++++.++..+|.|++|.|+|+||+..+..    ...
T Consensus         5 ~~~~~~~~F~~~~-~~d-G~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~~~~~~~   82 (172)
T d1juoa_           5 TQDPLYGYFAAVA-GQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQH   82 (172)
T ss_dssp             CCCTTHHHHHHHH-TTT-TEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhC-CCC-CCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhhhhhhHH
Confidence            4466889999987 788 9999999999999998532223467899999999999999999999999965522    445


Q ss_pred             cccccccCCcccccccccccccccCeeeecc
Q 013328          376 SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNA  406 (445)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  406 (445)
                      +...|.+.+|.+...|.......+|+.+++.
T Consensus        83 f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~  113 (172)
T d1juoa_          83 FISFDTDRSGTVDPQELQKALTTMGFRLSPQ  113 (172)
T ss_dssp             HHTTCTTCCSEECHHHHHHHHHHTTCCCCHH
T ss_pred             HHHhCcCCCCcCCHHHHHHHHHHHHHhhhHH
Confidence            6777888999998888777777788776644

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.92  E-value=7e-10  Score=95.16  Aligned_cols=64  Identities=17%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|+.+|+|++ |.|+.+||+.+|+.+|     ..+++++++.++..+|.|+||.|+|+||++.+.
T Consensus       105 ~~~~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~  168 (187)
T d1uhka1         105 IWGDALFDIVDKDQN-GAITLDEWKAYTKAAG-----IIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL  168 (187)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----SCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-cccchHHHHHHHHHhC-----CCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            457889999999999 9999999999999999     779999999999999999999999999997663

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=6.3e-10  Score=84.76  Aligned_cols=64  Identities=22%  Similarity=0.291  Sum_probs=58.2

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....++++|+.+|+|++ |+|+.+|++.+|+..|       ++.+++++|+..+|.|++|.|+++||+.+|
T Consensus         8 ~~~~~y~~~F~~~D~d~~-G~i~~~e~~~~l~~s~-------L~~~~L~~i~~~~D~d~dG~L~~~EF~~am   71 (99)
T d1qjta_           8 SGNPVYEKYYRQVEAGNT-GRVLALDAAAFLKKSG-------LPDLILGKIWDLADTDGKGVLSKQEFFVAL   71 (99)
T ss_dssp             TTCTHHHHHHHHHCCTTS-SCCCSHHHHHHHHTSS-------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHH
T ss_pred             cCcHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcC-------CcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Confidence            344567789999999999 9999999999999877       789999999999999999999999998655

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.6e-10  Score=95.86  Aligned_cols=101  Identities=12%  Similarity=0.110  Sum_probs=81.9

Q ss_pred             HHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCcccccc
Q 013328          305 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRN  380 (445)
Q Consensus       305 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~~~~  380 (445)
                      ..+|..+ .+.+ |+|+.+||+.+|..+|.......++.+.++.|+..+|.|++|.|+|+||+..+..    ...+...|
T Consensus         3 ~~~F~~~-a~~d-G~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~~~~~F~~fD   80 (165)
T d1k94a_           3 YTYFSAV-AGQD-GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVD   80 (165)
T ss_dssp             HHHHHHH-HGGG-TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHh-cCCC-CCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccchhHHHHHHhC
Confidence            4456666 4778 9999999999999998543233457889999999999999999999999964421    45678889


Q ss_pred             ccCCcccccccccccccccCeeeeccc
Q 013328          381 DLNDEDEDGFVKSSLEQTIGFSVKNAV  407 (445)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~g~~~~~~~  407 (445)
                      ++.+|.++..|.......+|+++++..
T Consensus        81 ~d~sG~I~~~El~~~l~~~G~~l~~~~  107 (165)
T d1k94a_          81 QDGSGTVEHHELRQAIGLMGYRLSPQT  107 (165)
T ss_dssp             TTCCSBCCHHHHHHHHHHTTCCCCHHH
T ss_pred             CCCCCeEcHHHHHHHHHHhhhcCCHHH
Confidence            999999999999888999998876543

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.89  E-value=3.2e-10  Score=92.96  Aligned_cols=115  Identities=11%  Similarity=0.157  Sum_probs=90.3

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      ++..+++++|..+|.|++ |.|+.+||+.+|+.+|     ..++++++..++.    +++|.|+|+||+..+...     
T Consensus         4 ~qi~e~~~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~   73 (142)
T d1wdcb_           4 KQIQEMKEAFSMIDVDRD-GFVSKEDIKAISEQLG-----RAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD   73 (142)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SSCCHHHHHHHHHHHS-----SCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCChHHHHHHHHHhh-----cCCCHHHHHHHHH----hccCccccccccccccccccccc
Confidence            456789999999999999 9999999999999999     7899999988874    568999999999766431     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                            ..+...|.+..|.++..+.......+|.+++...     +..  ..+.+|.+ +|+++
T Consensus        74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e-----~~~--l~~~~d~~-~G~I~  129 (142)
T d1wdcb_          74 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDE-----MRM--TFKEAPVE-GGKFD  129 (142)
T ss_dssp             CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHCCEE-TTEEC
T ss_pred             hhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHH-----HHH--HHHHhCCC-CCEEc
Confidence                  1245668888899998888877888887666543     222  34456765 48754

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=9.5e-10  Score=92.32  Aligned_cols=79  Identities=13%  Similarity=0.197  Sum_probs=66.5

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.  ||.|+|+||+..+..    ...++
T Consensus        70 ~~~~~~F~~fD~d~s-G~I~~~El~~~l~~~G-----~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~  141 (165)
T d1k94a_          70 NAWKENFMTVDQDGS-GTVEHHELRQAIGLMG-----YRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFFR  141 (165)
T ss_dssp             HHHHHHHHHHCTTCC-SBCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHhCCCCC-CeEcHHHHHHHHHHhh-----hcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHH
Confidence            467889999999999 9999999999999999     78999999999999975  589999999977644    23456


Q ss_pred             cccccCCcccc
Q 013328          378 QRNDLNDEDED  388 (445)
Q Consensus       378 ~~~~~~~~~~~  388 (445)
                      ..|.+.+|.+.
T Consensus       142 ~~D~d~~G~i~  152 (165)
T d1k94a_         142 KRDHLQQGSAN  152 (165)
T ss_dssp             TTCTTCCSEEE
T ss_pred             HhCCCCCCcEE
Confidence            66666666553

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=1.3e-10  Score=99.52  Aligned_cols=100  Identities=12%  Similarity=0.059  Sum_probs=77.5

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..|..+|+.+|+|++ |+|+.+||+.+|+.++.    ...+.++++.++..+|.|++|.|+|+||+..+-.    ...+.
T Consensus        19 ~~L~~iF~~~D~d~~-G~Is~~E~~~~l~~~~~----~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~~~~~~~f~   93 (181)
T d1hqva_          19 SFLWNVFQRVDKDRS-GVISDNELQQALSNGTW----TPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFR   93 (181)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCHHHHHHHCCCSSS----SCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcCC----CcccHHHHHHHhhccccccccchhhhHHHhhhhhccccccccc
Confidence            558889999999999 99999999999988872    3478899999999999999999999999965422    23344


Q ss_pred             cccccCCcccccccccccccccCeeeecc
Q 013328          378 QRNDLNDEDEDGFVKSSLEQTIGFSVKNA  406 (445)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  406 (445)
                      ..+.+..|.+...+........|..++..
T Consensus        94 ~~D~~~~G~i~~~el~~~l~~~~~~l~~e  122 (181)
T d1hqva_          94 TYDRDNSGMIDKNELKQALSGFGYRLSDQ  122 (181)
T ss_dssp             HHCTTCCSSBCHHHHHHHHHHHTBCCCHH
T ss_pred             cccccccchhhhHHHHHHHHHcCCcchhH
Confidence            55667777777766655555666554433

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.88  E-value=2.1e-09  Score=90.82  Aligned_cols=64  Identities=19%  Similarity=0.300  Sum_probs=58.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ....+..+|..+|.|++ |.|+.+||+.++..+|       +++++++.++..+|.|+||.|+|+||+..+.
T Consensus       100 ~~~~~~~~F~~~D~d~d-G~Is~~E~~~~~~~~~-------~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~  163 (176)
T d1nyaa_         100 LGPVVKGIVGMCDKNAD-GQINADEFAAWLTALG-------MSKAEAAEAFNQVDTNGNGELSLDELLTAVR  163 (176)
T ss_dssp             HHHHHHHHHHHTCSSCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHS
T ss_pred             HHHHHHHHHHHHccCCC-hhhhHHHHHHHHHhcC-------CcHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            34567889999999999 9999999999999988       7899999999999999999999999996553

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.85  E-value=2.9e-10  Score=86.89  Aligned_cols=71  Identities=15%  Similarity=0.190  Sum_probs=53.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccC--CCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT--GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~--~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .....+.++|+.+| +++ |.|+..||+.+|+..+-.  ......++.+++++|+.+|.|+||.|+|+||+..|.
T Consensus         7 ~~i~~l~~~F~~y~-~~d-G~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~   79 (100)
T d1psra_           7 RSIIGMIDMFHKYT-RRD-DKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLG   79 (100)
T ss_dssp             HHHHHHHHHHHHTC-CTT-SCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-CCC-CcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            34556777888887 788 999999999999986400  000113445789999999999999999999997663

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=4.9e-10  Score=87.07  Aligned_cols=66  Identities=20%  Similarity=0.252  Sum_probs=58.2

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .+....+.++|+.+|+|++ |+|+.+|++.+|.+.|       ++.+++++|+..+|.|++|.|+++||+.+|.
T Consensus        18 ~ee~~~y~~lF~~~D~d~~-G~Is~~e~~~~l~~s~-------L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          18 EEQREYYVNQFRSLQPDPS-SFISGSVAKNFFTKSK-------LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SSSHHHHHHHHHHHCCSSS-SEEEHHHHHHHCCSSS-------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcc-cchhHHHHHHHHHhhc-------cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            3455678899999999999 9999999999998877       6677899999999999999999999986553

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.83  E-value=2.5e-10  Score=94.78  Aligned_cols=102  Identities=10%  Similarity=0.021  Sum_probs=82.1

Q ss_pred             hccchHHHhcccccc--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          299 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      ++..+++++|..||.  |++ |+|+.+||+.+|+.+|     ..++++++..++ ..+.+++|.|+|+||+..+..    
T Consensus         4 eqi~~l~~~F~~fD~~~~~d-G~I~~~el~~~l~~lG-----~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~   76 (152)
T d1wdcc_           4 DEIDDLKDVFELFDFWDGRD-GAVDAFKLGDVCRCLG-----INPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDC   76 (152)
T ss_dssp             HHHHHHHHHHHHHHHHTCSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHCcCCCCC-CeECHHHHHHHHHHhc-----cCccHhhhhhhh-hhhcccccccccccccccccccccc
Confidence            345678999999995  888 9999999999999999     779999998764 568889999999999976532    


Q ss_pred             --------cCccccccccCCcccccccccccccccCeeeeccc
Q 013328          373 --------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  407 (445)
Q Consensus       373 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  407 (445)
                              ...|...|.+..|.+...+.......+|..++...
T Consensus        77 ~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e  119 (152)
T d1wdcc_          77 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED  119 (152)
T ss_dssp             CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHH
T ss_pred             chhHHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHH
Confidence                    11345668888888888888777788887766544

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.81  E-value=2.1e-09  Score=91.93  Aligned_cols=64  Identities=13%  Similarity=0.184  Sum_probs=59.6

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+.++|+.+|.+++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus        84 ~~~~~~F~~~D~~~~-g~I~~~el~~~l~~~g-----~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~  147 (182)
T d1y1xa_          84 LSMREGFRKRDSSGD-GRLDSNEVRAALLSSG-----YQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI  147 (182)
T ss_dssp             HHHHHHHHHHCTTSS-SCBCHHHHHHHHHTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cccccchhccccccc-hhhhhHHHHHHHHHhC-----CchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence            457788999999999 9999999999999999     889999999999999999999999999997663

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.81  E-value=1.3e-09  Score=93.59  Aligned_cols=102  Identities=19%  Similarity=0.125  Sum_probs=84.5

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cC
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  374 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~  374 (445)
                      ..++++|..+| |++ |.|+..||+.+|..+|...   ....++.+++..++..+|.|++|.|+|+||+..+..    ..
T Consensus        18 ~~~r~~F~~~d-~~d-G~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~   95 (186)
T d1df0a1          18 DGFRRLFAQLA-GED-AEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQK   95 (186)
T ss_dssp             HHHHHHHHHHH-GGG-TCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCC-CeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhHHHHHH
Confidence            45889999998 899 9999999999999886321   123467889999999999999999999999865422    34


Q ss_pred             ccccccccCCcccccccccccccccCeeeec
Q 013328          375 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  405 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  405 (445)
                      .+...|++.+|.++..|........|+.++.
T Consensus        96 ~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~  126 (186)
T d1df0a1          96 IYREIDVDRSGTMNSYEMRKALEEAGFKLPC  126 (186)
T ss_dssp             HHHHHCTTCCSCEEGGGHHHHHHHTTEECCH
T ss_pred             HHHhhCCCCCCcccHHHHHHHHHHHHhcccH
Confidence            6678899999999999998888889987654

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.80  E-value=3.8e-09  Score=89.34  Aligned_cols=64  Identities=14%  Similarity=0.148  Sum_probs=57.7

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+..+|+.+|.|++ |.|+.+||+.+|+.+|       ++.+++..++..+|.|+||.|+|+||+..+..
T Consensus        93 ~~~~~~~F~~~D~d~d-G~Is~~E~~~~l~~~~-------~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  156 (174)
T d2scpa_          93 EGPLPLFFRAVDTNED-NNISRDEYGIFFGMLG-------LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCGGGHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCcc-ccCCHHHHHHHHHHHh-------hhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHH
Confidence            4567889999999999 9999999999999988       66788999999999999999999999976643

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.79  E-value=6.9e-10  Score=92.40  Aligned_cols=121  Identities=17%  Similarity=0.201  Sum_probs=96.2

Q ss_pred             hhccchHHHhccccccCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          298 RRASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      .....+++++|+.||.|+ + |.|+..||+.+|+.+|     ..+++.++..++..++.+++|.+++++|...+..    
T Consensus        10 ~~~~~~l~~~F~~~D~d~~d-G~I~~~e~~~~l~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (156)
T d1dtla_          10 EEQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   83 (156)
T ss_dssp             HHHHHHHHHHHHHHTTTCGG-GSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHcCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence            345678999999999995 8 9999999999999999     8899999999999999999999999999865532    


Q ss_pred             ----------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          373 ----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       373 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                                ...+...|.+..|.++..+.......+|..++...     +..  +.+.+|.+.+|.|+
T Consensus        84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e-----~~~--i~~~~D~d~dG~I~  145 (156)
T d1dtla_          84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD-----IEE--LMKDGDKNNDGRID  145 (156)
T ss_dssp             ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHH-----HHH--HHHHHCTTSSSEEE
T ss_pred             cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                      12356678888888888887777777776555443     333  45678888899886

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.77  E-value=4e-10  Score=92.69  Aligned_cols=117  Identities=9%  Similarity=0.026  Sum_probs=84.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc-----
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----  373 (445)
                      ++..+++++|..+|.+++ |+|+.+||+.+|+.+|     ..++.++   ++..++.+++|.|+|+||+..+...     
T Consensus         4 ~qi~el~e~F~~~D~~~~-G~I~~~e~~~~l~~lg-----~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~   74 (145)
T d2mysb_           4 TEIEDFKEAFTVIDQNAD-GIIDKDDLRETFAAMG-----RLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGAD   74 (145)
T ss_pred             HHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHhC-----CCcchHH---HHHHHHHhccCceeechhhhhhhhcccccc
Confidence            455678999999999999 9999999999999999     4444432   3455566789999999999766432     


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                            ..+...|.+..|.+...+.......+|.+++...     +..  ....++.+.+|+++
T Consensus        75 ~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e-----~~~--~~~~~d~d~dg~I~  131 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE-----IKN--MWAAFPPDVAGNVD  131 (145)
T ss_pred             hHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                  1235556777777777776666666776554333     333  55677888899875

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.77  E-value=7.8e-09  Score=76.29  Aligned_cols=71  Identities=20%  Similarity=0.284  Sum_probs=55.4

Q ss_pred             hhccchHHHhcccc-ccCCCCCcccHHHHHHHHHHh-c-cCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFL-KADNDGDYITYSGFCEALEQL-N-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~-g-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......+..+|+.+ ..+|+.++|+..||+.+|+.- + +.  ....++..++++|+.+|.|+||.|+|+||+..+
T Consensus         5 E~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l--~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li   78 (90)
T d3cr5x1           5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL--EEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   78 (90)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTS--CCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            34556788899988 566764689999999999872 1 00  034557789999999999999999999998655

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.6e-10  Score=92.20  Aligned_cols=115  Identities=13%  Similarity=0.103  Sum_probs=88.0

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC--CCCceeeHHHHHHHHhcc-------
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI--DGNGVVDYKEFQQRIWKT-------  373 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~--~~~g~i~~~eF~~~~~~~-------  373 (445)
                      +++++|..||.+++ |.|+.+||+.+|+.+|     ..++++++.+++..++.  +++|.|+|.||...+...       
T Consensus         1 e~ke~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~   74 (139)
T d1w7jb1           1 EFKEAFELFDRVGD-GKILYSQCGDVMRALG-----QNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG   74 (139)
T ss_dssp             CHHHHHHHHCCSSS-SEEESTTHHHHHHHTT-----CCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-----
T ss_pred             CHHHHHHHHhCCCC-CeECHHHHHHHHHHhc-----cCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc
Confidence            47899999999999 9999999999999999     88999999999987764  678999999998766321       


Q ss_pred             ------CccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          374 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                            ..+...|.+..|.+...+.......+|..++...+  ..+.+      .+.+.+|+++
T Consensus        75 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~--~~l~~------~~~d~dg~I~  130 (139)
T d1w7jb1          75 TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV--ETVLA------GHEDSNGCIN  130 (139)
T ss_dssp             ---CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHH--HHHHT------TCCCTTSEEE
T ss_pred             HHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHH--HHHHh------hCCCCCCeEe
Confidence                  12456677888888888877777778866554442  12222      2446678765

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.75  E-value=4.5e-09  Score=90.08  Aligned_cols=79  Identities=13%  Similarity=0.085  Sum_probs=61.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|+|++ |.|+..||+.+|..+|     ..++++.++.++.. |.|++|.|+|+||+..+..    ...+.
T Consensus        93 ~~~~~~F~~~D~d~s-G~i~~~El~~~l~~~g-----~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~  165 (188)
T d1qxpa2          93 RNYLTIFRKFDLDKS-GSMSAYEMRMAIEAAG-----FKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFK  165 (188)
T ss_dssp             HHHHHHHGGGCTTCC-SCCBHHHHHHHHHHTT-----EECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CEECHHHHHHHHHHhh-----hcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            457889999999999 9999999999999999     66888777766665 6799999999999976633    12334


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+..|.+
T Consensus       166 ~~D~~~~G~i  175 (188)
T d1qxpa2         166 QLDPENTGTI  175 (188)
T ss_dssp             HSCSSCCSCE
T ss_pred             HhCCCCCCeE
Confidence            4555555544

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=5.4e-09  Score=89.04  Aligned_cols=85  Identities=20%  Similarity=0.377  Sum_probs=61.5

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH----HHHHHHHhcCCCCce
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE----TKDLWVQADIDGNGV  360 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~----~~~~~~~~d~~~~g~  360 (445)
                      +.++..+....  ......++.+|+.||.|++ |+|+.+||..+++.+.-.+....+++++    ++.+++.+|.|+||.
T Consensus        78 ~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~  156 (180)
T d1xo5a_          78 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT  156 (180)
T ss_dssp             HHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSS
T ss_pred             HHHHHHHHHHhhcCCHHHHHHHhhccccCCCC-CeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCc
Confidence            44555554443  2445678999999999999 9999999999999872000113344433    566889999999999


Q ss_pred             eeHHHHHHHHhc
Q 013328          361 VDYKEFQQRIWK  372 (445)
Q Consensus       361 i~~~eF~~~~~~  372 (445)
                      |+|+||.+.+..
T Consensus       157 Is~~EF~~~~~~  168 (180)
T d1xo5a_         157 INLSEFQHVISR  168 (180)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHh
Confidence            999999977654

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.73  E-value=1.6e-09  Score=92.51  Aligned_cols=61  Identities=10%  Similarity=0.127  Sum_probs=55.7

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..+..+|+.+|.|++ |+|+.+||+.+|..+|       ++.++++.++..+|.|+||.|+|+||++.+
T Consensus       105 ~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~-------l~~~~~~~~f~~~D~d~dG~i~~~EF~~~~  165 (185)
T d2sasa_         105 NRIPFLFKGMDVSGD-GIVDLEEFQNYCKNFQ-------LQCADVPAVYNVITDGGKVTFDLNRYKELY  165 (185)
T ss_dssp             HHHHHHHHHHCTTSS-SCCCHHHHHHHTTSSC-------CCCSSHHHHHHHHHTTTTSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-ccCCHHHHHHHHHHcC-------CCHHHHHHHHHHcCCCCCCCCcHHHHHHHH
Confidence            357889999999999 9999999999999887       567789999999999999999999999655

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.71  E-value=2.8e-09  Score=91.38  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..+..+|+.+|+|++ |+|+.+||+.+|+.+|     ..++++.+ +++..+|.|++|.|+|+||+..+..    ...+.
T Consensus        91 ~~~~~~F~~~D~d~s-G~I~~~El~~~l~~~g-----~~~~~~~~-~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~  163 (186)
T d1df0a1          91 QKYQKIYREIDVDRS-GTMNSYEMRKALEEAG-----FKLPCQLH-QVIVARFADDELIIDFDNFVRCLVRLEILFKIFK  163 (186)
T ss_dssp             HHHHHHHHHHCTTCC-SCEEGGGHHHHHHHTT-----EECCHHHH-HHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCCC-CcccHHHHHHHHHHHH-----hcccHHHH-HHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHH
Confidence            457889999999999 9999999999999999     66887654 5666789999999999999987744    23445


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+..|.+
T Consensus       164 ~~D~~~~G~i  173 (186)
T d1df0a1         164 QLDPENTGTI  173 (186)
T ss_dssp             HHCTTCCSEE
T ss_pred             HhCCCCCCcE
Confidence            5566666654

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.1e-08  Score=87.53  Aligned_cols=85  Identities=16%  Similarity=0.293  Sum_probs=61.8

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhc-cCCC------CCCCCHHHHHHHHHHhcCCCC
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-LTGH------KHGLADEETKDLWVQADIDGN  358 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g-~~~~------~~~~~~~~~~~~~~~~d~~~~  358 (445)
                      +.++..+.... ......++.+|+.||.|++ |.|+.+||+.++..+. ..+.      .....++.++.+|+.+|.|+|
T Consensus        80 ~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~d-G~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~d  158 (187)
T d1g8ia_          80 SEFIQALSVTSRGTLDEKLRWAFKLYDLDND-GYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNAD  158 (187)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCS
T ss_pred             HHHHHHHHHhccCchhhhHHHHHHHHhcCCC-CeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCC
Confidence            34444444333 3445678889999999999 9999999999987541 0000      012334678999999999999


Q ss_pred             ceeeHHHHHHHHhc
Q 013328          359 GVVDYKEFQQRIWK  372 (445)
Q Consensus       359 g~i~~~eF~~~~~~  372 (445)
                      |.|+|+||++.+..
T Consensus       159 G~Is~~EF~~~~~~  172 (187)
T d1g8ia_         159 GKLTLQEFQEGSKA  172 (187)
T ss_dssp             SEEEHHHHHHHHHH
T ss_pred             CcEeHHHHHHHHHH
Confidence            99999999987654

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.71  E-value=4.2e-09  Score=84.82  Aligned_cols=61  Identities=16%  Similarity=0.278  Sum_probs=54.1

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...++.+|+.+|.+++ |.|+.+||+.++..++         .+++..+|..+|.|+||.|+|+||++.|+
T Consensus        74 ~~~~~~~F~~~D~~~~-g~i~~~el~~~~~~~~---------~~~~~~~~~~~D~d~dG~is~~EF~~~~l  134 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGD-GKLTKEEVTSFFKKHG---------IEKVAEQVMKADANGDGYITLEEFLEFSL  134 (134)
T ss_dssp             HHHHHHHHHHHCCSSS-SEEEHHHHHHHHTTTT---------CHHHHHHHHHHHCSSSSEEEHHHHHHHHC
T ss_pred             cccccccccccccccC-CcccHHHHHHHHHhcC---------cHHHHHHHHHHCCCCCCCCCHHHHHHHhC
Confidence            3467889999999999 9999999999988766         35788999999999999999999998763

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=3.6e-09  Score=86.82  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=95.9

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc------
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~------  372 (445)
                      +...+++++|+.+|.|++ |+|+.+||+.+|..+|     ..+++.++..++..++.++++.++|++|+..+..      
T Consensus         7 ~~i~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (146)
T d1lkja_           7 EQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND   80 (146)
T ss_dssp             HHHHHHHHHHHHHCCSSS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcEeHHHHHHHHHhcC-----CCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence            455779999999999999 9999999999999999     7899999999999999999999999999976633      


Q ss_pred             -----cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                           ...+...|.+..|.+...|.......+|..++...+     ..  +...++ +.+|+++
T Consensus        81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~-----~~--~~~~~d-d~dG~I~  136 (146)
T d1lkja_          81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV-----DD--MLREVS-DGSGEIN  136 (146)
T ss_dssp             HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHH-----HH--HHHHHC-CSSSEEE
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHH-----HH--HHHhcc-CCCCeEe
Confidence                 224567788999999998887777788876665442     22  333455 6678764

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.69  E-value=7.3e-09  Score=77.15  Aligned_cols=67  Identities=18%  Similarity=0.246  Sum_probs=54.9

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .....+..+|+.+ ..+|+.++++..||+.+|+.     ++     ..-+++.++++|+.+|.|+||.|+|+||+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~-----~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li   78 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQ-----NQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI   78 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHH-----HCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            4556788899887 45676568999999999976     44     33566789999999999999999999998655

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.67  E-value=1.1e-08  Score=87.09  Aligned_cols=80  Identities=20%  Similarity=0.175  Sum_probs=66.7

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..++.+|+.+|.+++ |.|+.+||+.+|...|     ..+++++++++++.+|.+++|.|+|+||+..+..    ...+.
T Consensus        86 ~~~~~~f~~~D~~~~-G~i~~~el~~~l~~~~-----~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~  159 (181)
T d1hqva_          86 TDWQNVFRTYDRDNS-GMIDKNELKQALSGFG-----YRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFR  159 (181)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCHHHHHHHHHHHT-----BCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc-chhhhHHHHHHHHHcC-----CcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            457889999999999 9999999999999999     7899999999999999999999999999976632    22334


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+.+|.+
T Consensus       160 ~~D~~~dG~i  169 (181)
T d1hqva_         160 RYDTDQDGWI  169 (181)
T ss_dssp             HHCTTCSSCC
T ss_pred             HhCCCCCCCE
Confidence            4555555544

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.67  E-value=1.7e-08  Score=85.85  Aligned_cols=84  Identities=14%  Similarity=0.232  Sum_probs=63.5

Q ss_pred             HHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccC-C------CCCCCCHHHHHHHHHHhcCCCCc
Q 013328          288 AVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT-G------HKHGLADEETKDLWVQADIDGNG  359 (445)
Q Consensus       288 ~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~-~------~~~~~~~~~~~~~~~~~d~~~~g  359 (445)
                      .++..+.... ......++.+|+.+|.|++ |+|+.+|+..++..+.-. .      ......++.++.+|+.+|.|+||
T Consensus        80 eFl~~~~~~~~~~~~~~~~~~f~~~D~d~d-g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG  158 (181)
T d1bjfa_          80 EFIIALSVTSRGKLEQKLKWAFSMYDLDGN-GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDG  158 (181)
T ss_dssp             HHHHHHHHHTSSCHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSS
T ss_pred             HHHHHHHHHhhhchHHHHHHHHHHhccCCC-CeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCC
Confidence            3444444333 3445678899999999999 999999999999875300 0      00234567899999999999999


Q ss_pred             eeeHHHHHHHHhc
Q 013328          360 VVDYKEFQQRIWK  372 (445)
Q Consensus       360 ~i~~~eF~~~~~~  372 (445)
                      .|+|+||++.+..
T Consensus       159 ~Is~~EF~~~~~~  171 (181)
T d1bjfa_         159 KLSLEEFIRGAKS  171 (181)
T ss_dssp             EECHHHHHHHHHH
T ss_pred             cEeHHHHHHHHHh
Confidence            9999999987754

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.67  E-value=3.6e-09  Score=89.61  Aligned_cols=103  Identities=14%  Similarity=0.131  Sum_probs=81.1

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----c
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  373 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~  373 (445)
                      ..+++++|..+|. ++ |.|+..||+.+|..+|....   ...++.+.++.++..+|.|++|.|+|+||+..+-.    .
T Consensus         3 ~~~~r~~F~~~d~-~d-g~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~~~~~   80 (173)
T d1alva_           3 VRQFRRLFAQLAG-DD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ   80 (173)
T ss_dssp             HHHHHHHHHHHHG-GG-TSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CC-CcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhhhHHH
Confidence            4578999999994 48 99999999999999874311   12357789999999999999999999999864421    3


Q ss_pred             CccccccccCCcccccccccccccccCeeeec
Q 013328          374 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  405 (445)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  405 (445)
                      ..+...|.+.+|.++..|....+...|..++.
T Consensus        81 ~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~  112 (173)
T d1alva_          81 AIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE  112 (173)
T ss_dssp             HHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCH
T ss_pred             HHHHHhccCCCCeecHHHHHHHHHHHHHhhHH
Confidence            34567788889999988877777777766543

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.67  E-value=5e-09  Score=89.49  Aligned_cols=69  Identities=26%  Similarity=0.424  Sum_probs=60.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccCc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW  375 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~  375 (445)
                      .....+..+|+.+|.+++ |.|+..+|+.+|..+|       +++++++.+++.+|.|+||.|+|+||++.|.....
T Consensus        79 ~~~e~l~~aF~~~D~d~~-G~i~~~el~~~l~~~g-------l~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~~  147 (182)
T d1s6ia_          79 EREENLVSAFSYFDKDGS-GYITLDEIQQACKDFG-------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG  147 (182)
T ss_dssp             CCCCSTHHHHHHTTTTCS-SEEEHHHHHHTTTTTT-------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred             ccHHHHHHHHHHHhhcCC-CccchhhhhhhhhhcC-------ccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCcC
Confidence            444678999999999999 9999999999999887       67889999999999999999999999976655443

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.64  E-value=5.7e-10  Score=95.82  Aligned_cols=104  Identities=16%  Similarity=0.145  Sum_probs=74.4

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cC
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  374 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~  374 (445)
                      ..++++|+.+| +++ |.|+..||+.+|..+|...   ....++.++++.|+..+|.|++|.|+|+||...+..    ..
T Consensus        20 ~~~r~~F~~~d-~~d-G~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~~~~~~   97 (188)
T d1qxpa2          20 DNFKTLFSKLA-GDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLT   97 (188)
T ss_dssp             -------CCCC-CSS-SSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCC-CEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhHHHHH
Confidence            45888999999 558 9999999999987765210   113356788999999999999999999999854411    44


Q ss_pred             ccccccccCCcccccccccccccccCeeeeccc
Q 013328          375 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  407 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  407 (445)
                      .|...|++.+|.++..|.......+|+.++...
T Consensus        98 ~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~  130 (188)
T d1qxpa2          98 IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQL  130 (188)
T ss_dssp             HHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHH
T ss_pred             HHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHH
Confidence            688999999999999999888999998876543

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=3.3e-10  Score=95.38  Aligned_cols=123  Identities=19%  Similarity=0.136  Sum_probs=78.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhccCc--
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW--  375 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--  375 (445)
                      .+....+.++|+.+|.|++ |+|+.+||+.++....     .    +.+++++..+|.+++|.|+|+||+..+.....  
T Consensus        12 ~eei~~l~~~F~~~D~d~~-G~I~~~E~~~~~~~~~-----~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~   81 (165)
T d1auib_          12 ADEIKRLGKRFKKLDLDNS-GSLSVEEFMSLPELQQ-----N----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG   81 (165)
T ss_dssp             HHHHHHHHHHHHHHCTTCC-SEECHHHHTTSHHHHT-----C----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCCcHHHHHHhhhccC-----C----HHHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence            4566789999999999999 9999999998765533     1    24678999999999999999999976644221  


Q ss_pred             ---------cccccccCCccccccccccccc-ccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          376 ---------SDQRNDLNDEDEDGFVKSSLEQ-TIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       376 ---------~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                               +...+.+..|.+...+...... ..|..+.... ....+..  ....+|.+.+|+|+..
T Consensus        82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~-~~~~~~~--~~~~~D~~~dG~Is~~  146 (165)
T d1auib_          82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ-LQQIVDK--TIINADKDGDGRISFE  146 (165)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHH-HHHHHHH--HHHHHCTTSSSSEEHH
T ss_pred             hhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHH-HHHHHHH--HHHHcCCCCCCcEeHH
Confidence                     1234555555555554332221 1121111111 0111111  3456788999998753

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.63  E-value=1.8e-08  Score=74.85  Aligned_cols=71  Identities=20%  Similarity=0.283  Sum_probs=52.2

Q ss_pred             hhccchHHHhcccc-ccCCCCCcccHHHHHHHHHH-hc-cCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFL-KADNDGDYITYSGFCEALEQ-LN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......+..+|+.+ ..+|+.++++..||+.+|+. ++ +-  ....+++.++++|+.+|.|+||.|+|+||+..+
T Consensus         5 E~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l--~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   78 (94)
T d1j55a_           5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFL--QSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFV   78 (94)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC--------CHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            34556788899888 45665468999999999987 22 00  023345679999999999999999999999655

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.62  E-value=1.2e-08  Score=86.35  Aligned_cols=79  Identities=13%  Similarity=0.075  Sum_probs=64.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      ..+..+|+.||.|++ |.|+..||+.+|..+|     ..+++++++.++ .+|.|++|.|+|+||++.+..    ...++
T Consensus        77 ~~~~~~f~~~D~d~~-G~I~~~el~~~L~~~g-----~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~  149 (173)
T d1alva_          77 KKWQAIYKQFDVDRS-GTIGSSELPGAFEAAG-----FHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRLDAMFRAFK  149 (173)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCTTTHHHHHHHHT-----CCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccCCC-CeecHHHHHHHHHHHH-----HhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999 9999999999999999     778888877666 566799999999999987733    23445


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+..|.+
T Consensus       150 ~~D~d~~G~i  159 (173)
T d1alva_         150 SLDKDGTGQI  159 (173)
T ss_dssp             HHSSSCCSEE
T ss_pred             HhCCCCCCcE
Confidence            6676766655

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=6.8e-08  Score=82.80  Aligned_cols=85  Identities=15%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhcc-CCC------CCCCCHHHHHHHHHHhcCCCC
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGH------KHGLADEETKDLWVQADIDGN  358 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~~------~~~~~~~~~~~~~~~~d~~~~  358 (445)
                      ..++..+.... ......++.+|+.||.|++ |.|+.+||..++..+.- .+.      .....++.++.+|+.+|.|+|
T Consensus        83 ~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~d-G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~d  161 (190)
T d1fpwa_          83 EEFITVLSTTSRGTLEEKLSWAFELYDLNHD-GYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED  161 (190)
T ss_dssp             HHHHHHHHHHSCCCSTHHHHHHHHHHCSSCS-SEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHHHccCchHHHHHHHHHHhccCCC-CcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCC
Confidence            33444444333 3556789999999999999 99999999999987631 000      011224678999999999999


Q ss_pred             ceeeHHHHHHHHhc
Q 013328          359 GVVDYKEFQQRIWK  372 (445)
Q Consensus       359 g~i~~~eF~~~~~~  372 (445)
                      |.|+|+||.+.+..
T Consensus       162 G~Is~~EF~~~~~~  175 (190)
T d1fpwa_         162 GYITLDEFREGSKV  175 (190)
T ss_dssp             SEEEHHHHHHHHHS
T ss_pred             CcCcHHHHHHHHHH
Confidence            99999999976644

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.57  E-value=6.7e-09  Score=60.40  Aligned_cols=31  Identities=19%  Similarity=0.375  Sum_probs=29.1

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ++++++|+.||+|++ |+|+..||+.+|+.||
T Consensus         3 eel~eAF~~FDkDg~-G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           3 EEIREAFRVFDKDGN-GYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHSSSCC-SCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC
Confidence            578999999999999 9999999999998876

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.54  E-value=9.6e-08  Score=82.55  Aligned_cols=80  Identities=11%  Similarity=0.154  Sum_probs=61.0

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCC--------------CHHHHHHHHH
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--------------ADEETKDLWV  351 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--------------~~~~~~~~~~  351 (445)
                      ..++..+.... ......++.+|+.||.|++ |.|+.+|+..++..+.     ...              .++.++.+|.
T Consensus        83 ~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~is~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~if~  156 (201)
T d1omra_          83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGN-GTISKNEVLEIVTAIF-----KMISPEDTKHLPEDENTPEKRAEKIWG  156 (201)
T ss_dssp             HHHHHHHHHHHSSCGGGSHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH-----TTSCHHHHTTSCGGGSSHHHHHHHHHH
T ss_pred             hhHHHHHHhhcccchHHHHHHHHHHHccCCC-CccCHHHHHHHHHHHH-----hhcChhhhhhhhhhhccHHHHHHHHHH
Confidence            33444333333 4455678999999999999 9999999999998764     211              2345789999


Q ss_pred             HhcCCCCceeeHHHHHHHHhc
Q 013328          352 QADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       352 ~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      .+|.|+||.|+|+||++.+..
T Consensus       157 ~~D~d~dG~Is~~EF~~~~~~  177 (201)
T d1omra_         157 FFGKKDDDKLTEKEFIEGTLA  177 (201)
T ss_dssp             HTTCCTTCCBCHHHHHHHHHH
T ss_pred             HhCCCCCCCCcHHHHHHHHHH
Confidence            999999999999999986643

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.51  E-value=1.2e-07  Score=80.66  Aligned_cols=80  Identities=13%  Similarity=0.182  Sum_probs=60.7

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHH----HHHHHHHhcCC
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEE----TKDLWVQADID  356 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~----~~~~~~~~d~~  356 (445)
                      +.++..+....  ......++.+|+.+|.|++ |.|+.+|++.++..+    |     ..+++.+    ++.+++.+|.|
T Consensus        74 ~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~-G~Is~~e~~~~~~~~~~~~~-----~~~~~~~~~~~~~~if~~~D~d  147 (183)
T d2zfda1          74 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQ-GFIERQEVKQMVVATLAESG-----MNLKDTVIEDIIDKTFEEADTK  147 (183)
T ss_dssp             HHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSS-SSEEHHHHHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHhhhccCcHHHHHHHhhcccccCCC-CCccHHHHHHHHHHHHhhhh-----cccchHHHHHHHHHHHHHhCCC
Confidence            34444444433  2344678889999999999 999999999987654    4     4456554    56678999999


Q ss_pred             CCceeeHHHHHHHHhc
Q 013328          357 GNGVVDYKEFQQRIWK  372 (445)
Q Consensus       357 ~~g~i~~~eF~~~~~~  372 (445)
                      +||.|+|+||.+.+..
T Consensus       148 ~dG~Is~~EF~~~~~~  163 (183)
T d2zfda1         148 HDGKIDKEEWRSLVLR  163 (183)
T ss_dssp             CSSEECHHHHHHHHHH
T ss_pred             CCCeEcHHHHHHHHHH
Confidence            9999999999977754

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.51  E-value=9.7e-08  Score=69.01  Aligned_cols=71  Identities=14%  Similarity=0.193  Sum_probs=53.8

Q ss_pred             hhccchHHHhccccc-cCCCCCcccHHHHHHHHHH-hccCCCCCC--CCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          298 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHG--LADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~--~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ......+..+|+.+. ++|+.++++..||+.+|.. ++  .-...  -.+..++++|+.+|.|+||.|+|+||+..+
T Consensus         6 E~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~--~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   80 (83)
T d1xk4c1           6 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQ--NFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   80 (83)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTT--TTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhH--HHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            355667888998884 4555478999999999987 32  00011  245568999999999999999999999654

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.51  E-value=3.3e-08  Score=91.79  Aligned_cols=65  Identities=18%  Similarity=0.282  Sum_probs=57.7

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..+..+|..+|.|++ |+|+..||+.+|..+|+    ..++++++..+|..+|.|+||.|+|+||+..|+
T Consensus       253 ~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~~----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         253 LVLRILYAFADFDKS-GQLSKEEVQKVLEDAHI----PESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHHHHHTCSSSC-SSEEHHHHHHHHHHTTC----CGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             hHHHHHHHHHhcCCC-CCCcHHHHHHHHHHcCC----CcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            456678999999999 99999999999999982    236778899999999999999999999998774

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.49  E-value=1.4e-07  Score=80.73  Aligned_cols=85  Identities=13%  Similarity=0.200  Sum_probs=60.8

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhcc-----CCC------CC-CCCHHHHHHHHHHh
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-----TGH------KH-GLADEETKDLWVQA  353 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-----~~~------~~-~~~~~~~~~~~~~~  353 (445)
                      ..++..+.... ......++.+|+.+|.|++ |.|+..|+..++..+.-     ...      .. ..+++.++.+++.+
T Consensus        78 ~Ef~~~l~~~~~~~~~~~~~~~F~~~D~d~~-g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~  156 (189)
T d1jbaa_          78 LEYVAALNLVLRGTLEHKLKWTFKIYDKDRN-GCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLV  156 (189)
T ss_dssp             HHHHHHHHHHSSCCCTHHHHHHHHHHCSSCS-SCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHhhcccchHHHHHHHHhhhccCCC-CcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHh
Confidence            34444444333 3455678889999999999 99999999998775410     000      01 12245678999999


Q ss_pred             cCCCCceeeHHHHHHHHhc
Q 013328          354 DIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       354 d~~~~g~i~~~eF~~~~~~  372 (445)
                      |.|+||.|+|+||++.+..
T Consensus       157 D~d~dG~Is~~EF~~~~~~  175 (189)
T d1jbaa_         157 DENGDGQLSLNEFVEGARR  175 (189)
T ss_dssp             CCSCCSCBCHHHHHHHHTT
T ss_pred             CCCCCCcEeHHHHHHHHHh
Confidence            9999999999999987754

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.49  E-value=4.9e-08  Score=83.60  Aligned_cols=87  Identities=8%  Similarity=0.051  Sum_probs=68.9

Q ss_pred             hccchHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc----
Q 013328          299 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  373 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~----  373 (445)
                      ....+++++|+.|+.+ ++ |+|+.+||+.+|..++     ...+...++.++..+|.|+||.|+|.||+..+...    
T Consensus        18 ~~~~ei~~~~~~F~~~~~~-G~i~~~Ef~~~l~~~~-----~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~   91 (189)
T d1jbaa_          18 ADAAQLQEWYKKFLEECPS-GTLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT   91 (189)
T ss_dssp             HHHHHHHHHHHHHHSSSTT-CCEEHHHHHHHHHCCS-----SSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCC
T ss_pred             cCHHHHHHHHHHhcccCCC-CeeeHHHHHHHHHHcC-----CCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc
Confidence            3456788899998766 47 9999999999999888     67889999999999999999999999999766431    


Q ss_pred             ------CccccccccCCccccccc
Q 013328          374 ------TWSDQRNDLNDEDEDGFV  391 (445)
Q Consensus       374 ------~~~~~~~~~~~~~~~~~~  391 (445)
                            .++...|.+..|.+...|
T Consensus        92 ~~~~~~~~F~~~D~d~~g~i~~~E  115 (189)
T d1jbaa_          92 LEHKLKWTFKIYDKDRNGCIDRQE  115 (189)
T ss_dssp             CTHHHHHHHHHHCSSCSSCBCHHH
T ss_pred             hHHHHHHHHhhhccCCCCcccHhH
Confidence                  133444666666666554

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=5.1e-08  Score=81.53  Aligned_cols=67  Identities=22%  Similarity=0.381  Sum_probs=56.1

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh-ccCCCCCCCC----HHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLA----DEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~----~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ....+..+|+.+|.|++ |.|+.+||+.+++.. +     ..++    ++.++.++..+|.|+||.|+|+||++.|..
T Consensus        83 ~~~~~~~~f~~~d~d~~-g~Is~~el~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~  154 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKD-GYISNGELFQVLKMMVG-----NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  154 (165)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGG
T ss_pred             hHHHHHHHHHHhccccc-ccccHHHHHHHHHHhcc-----ccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhc
Confidence            44568999999999999 999999999999775 4     3344    455788999999999999999999976643

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.1e-07  Score=79.95  Aligned_cols=78  Identities=13%  Similarity=0.148  Sum_probs=64.6

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCccc
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  377 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~~~  377 (445)
                      .....+|+.+|.+++ |.|+.+||+.+|..+|     ..+++++++.+++.+|.  +|.|+|+||+..+..    ...+.
T Consensus        77 ~~~~~~f~~~D~d~s-G~i~~~El~~~l~~~g-----~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~~~~~~~f~  148 (172)
T d1juoa_          77 NGWRQHFISFDTDRS-GTVDPQELQKALTTMG-----FRLSPQAVNSIAKRYST--NGKITFDDYIACCVKLRALTDSFR  148 (172)
T ss_dssp             HHHHHHHHTTCTTCC-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHhCcCCC-CcCCHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHH
Confidence            446778999999999 9999999999999999     78999999999999975  578999999976643    23445


Q ss_pred             cccccCCccc
Q 013328          378 QRNDLNDEDE  387 (445)
Q Consensus       378 ~~~~~~~~~~  387 (445)
                      ..|.+.+|.+
T Consensus       149 ~~D~d~~G~I  158 (172)
T d1juoa_         149 RRDTAQQGVV  158 (172)
T ss_dssp             HTCTTCCSEE
T ss_pred             HhCCCCCCcE
Confidence            6666766665

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.45  E-value=2.6e-08  Score=86.28  Aligned_cols=90  Identities=10%  Similarity=0.020  Sum_probs=65.0

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      -...++..+|+.| +.+++ |.|+.+||+.+|..++.    ...+...++.++..+|.|++|.|+|.||+..+..     
T Consensus        22 f~~~ei~~l~~~F~~~~~~-G~is~~EF~~~l~~~~~----~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~   96 (201)
T d1omra_          22 FTEEELSSWYQSFLKECPS-GRITRQEFQTIYSKFFP----EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK   96 (201)
T ss_dssp             SCHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCT----TSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSC
T ss_pred             CCHHHHHHHHHHHHHHCcC-CCccHHHHHHHHHHhcC----CCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc
Confidence            3445566666655 66788 99999999999999871    2345566789999999999999999999966632     


Q ss_pred             -----cCccccccccCCccccccccc
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVKS  393 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~~  393 (445)
                           ..++...|.+..|.+...|..
T Consensus        97 ~~~~l~~~F~~~D~d~~G~is~~E~~  122 (201)
T d1omra_          97 TNQKLEWAFSLYDVDGNGTISKNEVL  122 (201)
T ss_dssp             GGGSHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             hHHHHHHHHHHHccCCCCccCHHHHH
Confidence                 122344466677777666543

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.40  E-value=2.2e-08  Score=92.98  Aligned_cols=88  Identities=9%  Similarity=0.065  Sum_probs=69.8

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----cCc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTW  375 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----~~~  375 (445)
                      ....++++|..+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|.||+..+..    ...
T Consensus       120 ~~~~~~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  193 (321)
T d1ij5a_         120 DTNILRQLFLSSAVSGS-GKFSFQDLKQVLAKYA-----DTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVAD  193 (321)
T ss_dssp             HHHHHHHHHTSSSSTTS-SCCCHHHHHHHHHHHH-----TTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHcCCCC-CeEcHHHHHHHHHHcC-----CcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHH
Confidence            34568899999999999 9999999999999999     7799999999999999999999999999854421    223


Q ss_pred             cccccccCCccccccccc
Q 013328          376 SDQRNDLNDEDEDGFVKS  393 (445)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~  393 (445)
                      +...+.+..+.+...+..
T Consensus       194 F~~~d~d~~~~i~~~~~~  211 (321)
T d1ij5a_         194 FRKIDTNSNGTLSRKEFR  211 (321)
T ss_dssp             HHHHCTTCCSEECHHHHH
T ss_pred             HHHHhhcccccchhHHHh
Confidence            344555555555544433

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.34  E-value=5.4e-07  Score=76.04  Aligned_cols=85  Identities=16%  Similarity=0.298  Sum_probs=59.6

Q ss_pred             HHHHHHHHHhh-hhccchHHHhccccccCCCCCcccHHHHHHHHHHhc-cCCC------CCCCCHHHHHHHHHHhcCCCC
Q 013328          287 EAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-LTGH------KHGLADEETKDLWVQADIDGN  358 (445)
Q Consensus       287 ~~v~~~~~~~~-~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g-~~~~------~~~~~~~~~~~~~~~~d~~~~  358 (445)
                      +.++..+.... ......++.+|+.+|.|++ |.|+.+|+...+..+. +.+.      .....++.++.+|+.+|.|+|
T Consensus        71 ~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~-g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~D  149 (178)
T d1s6ca_          71 EDFVTALSILLRGTVHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD  149 (178)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHhhccCCC-CeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCC
Confidence            34444443333 3445678889999999999 9999999998876541 1000      011234567899999999999


Q ss_pred             ceeeHHHHHHHHhc
Q 013328          359 GVVDYKEFQQRIWK  372 (445)
Q Consensus       359 g~i~~~eF~~~~~~  372 (445)
                      |.|+|+||.+.+..
T Consensus       150 G~Is~~EF~~~i~~  163 (178)
T d1s6ca_         150 GIVTLDEFLESCQE  163 (178)
T ss_dssp             SEECHHHHHHHTTS
T ss_pred             CcEeHHHHHHHHHH
Confidence            99999999976544

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.33  E-value=7e-07  Score=76.23  Aligned_cols=78  Identities=17%  Similarity=0.355  Sum_probs=63.8

Q ss_pred             HHHHHHHHHhh--hhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHH
Q 013328          287 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  364 (445)
Q Consensus       287 ~~v~~~~~~~~--~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  364 (445)
                      ..+...+..+.  ......+..+|+.+|.+++ |.|+..||..++..++     ....++.++.+++.+|.|++|.|+++
T Consensus        46 ~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~-G~I~~~Ef~~~~~~~~-----~~~~~e~~~~~F~~~D~d~dG~is~~  119 (190)
T d1fpwa_          46 EDFVKIYKQFFPFGSPEDFANHLFTVFDKDNN-GFIHFEEFITVLSTTS-----RGTLEEKLSWAFELYDLNHDGYITFD  119 (190)
T ss_dssp             HHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCS-SEECHHHHHHHHHHHS-----CCCSTHHHHHHHHHHCSSCSSEEEHH
T ss_pred             HHHHHHHHHHCCCCChHHHHHHHHHHhCcCCC-CcccHHHHHHHHHHHc-----cCchHHHHHHHHHHhccCCCCcCcHH
Confidence            44545554444  2233446789999999999 9999999999999987     66778899999999999999999999


Q ss_pred             HHHHHH
Q 013328          365 EFQQRI  370 (445)
Q Consensus       365 eF~~~~  370 (445)
                      ||...+
T Consensus       120 E~~~~~  125 (190)
T d1fpwa_         120 EMLTIV  125 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998665

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.22  E-value=3.9e-07  Score=50.40  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.9

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .+++.++|+.||+|+| |+|+.+||..+|+.-|
T Consensus         3 EeELae~FRifDkNaD-GyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           3 EEELANAFRIFDKNAD-GYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHHTTCCSSS-SCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHccCCc-ccccHHHHHHHHHhcC
Confidence            4688999999999999 9999999999998754

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.19  E-value=1.1e-07  Score=80.10  Aligned_cols=120  Identities=13%  Similarity=0.148  Sum_probs=77.8

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHH-------HHHHH--hcCCCCceeeHHHHHHHHh
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETK-------DLWVQ--ADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-------~~~~~--~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...++.+|+.+|.|++ |.|+.+||..++..++-.   ........+       .++..  .+.+++|.|+++||+..+.
T Consensus         5 ~~~l~~~F~~~D~d~d-G~Is~~Ef~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~   80 (174)
T d2scpa_           5 VQKMKTYFNRIDFDKD-GAITRMDFESMAERFAKE---SEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMK   80 (174)
T ss_dssp             HHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHH---SCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCC-CcEeHHHHHHHHHHHhcc---ccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHH
Confidence            3578899999999999 999999999998876311   111111122       22222  3678889999999987663


Q ss_pred             c---------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcceeEE
Q 013328          372 K---------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVV  433 (445)
Q Consensus       372 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (445)
                      .               ...+...|.+.+|.++..|.......+|+..       .++..  .-..+|.+.+|.|+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~-------~~~~~--~f~~~D~d~dG~Is~~  148 (174)
T d2scpa_          81 EMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDK-------TMAPA--SFDAIDTNNDGLLSLE  148 (174)
T ss_dssp             HHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCG-------GGHHH--HHHHHCTTCSSEECHH
T ss_pred             hhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhh-------HHHHH--HHhhcCCCCCCcEeHH
Confidence            2               1234566777778887777655444555321       12222  3357888999998864

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.10  E-value=1.1e-06  Score=74.46  Aligned_cols=88  Identities=14%  Similarity=0.046  Sum_probs=64.7

Q ss_pred             hhccchHHHhccccccC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhcc--
Q 013328          298 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT--  373 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~--  373 (445)
                      ......+.+.|+.+|.+  ++ |.|+.+||+.++..++     ...+ ..++.++..+|.|+||.|+|+||+..+...  
T Consensus        13 ~~ei~~L~~~F~~~d~~~~~~-G~i~~~ef~~~l~~~~-----~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~   85 (183)
T d2zfda1          13 VSEIEALYELFKKISSAVIDD-GLINKEEFQLALFKTN-----KKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHP   85 (183)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCS-SSBCHHHHHHHHHSCS-----SCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHCcCCCCC-CcCcHHHHHHHHHhcC-----CCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhc
Confidence            45567788889888865  68 9999999999987776     3333 457899999999999999999999766321  


Q ss_pred             ---------CccccccccCCcccccccc
Q 013328          374 ---------TWSDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       374 ---------~~~~~~~~~~~~~~~~~~~  392 (445)
                               .++...|.+..|.+...|.
T Consensus        86 ~~~~~~~~~~~F~~~D~d~~G~Is~~e~  113 (183)
T d2zfda1          86 NAPIDDKIHFSFQLYDLKQQGFIERQEV  113 (183)
T ss_dssp             TSCHHHHHHHHHHHHCTTSSSSEEHHHH
T ss_pred             cCcHHHHHHHhhcccccCCCCCccHHHH
Confidence                     1234556677776666553

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.10  E-value=1.7e-06  Score=72.83  Aligned_cols=87  Identities=10%  Similarity=-0.028  Sum_probs=64.0

Q ss_pred             ccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-----
Q 013328          300 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  372 (445)
Q Consensus       300 ~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-----  372 (445)
                      ...+++.+|+.| +.+++ |.|+.+||+.+|..++     ... +...++.++..+|.|++|.|+|+||+..+..     
T Consensus        11 t~~ei~~l~~~F~~~~~~-G~is~~ef~~~l~~~~-----~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~   84 (178)
T d1s6ca_          11 TKRELQVLYRGFKNECPS-GVVNEETFKQIYAQFF-----PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT   84 (178)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEECHHHHHHHHHHHS-----TTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHCcC-CCccHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccc
Confidence            345667777766 66788 9999999999999987     333 4556799999999999999999999866622     


Q ss_pred             -----cCccccccccCCcccccccc
Q 013328          373 -----TTWSDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       373 -----~~~~~~~~~~~~~~~~~~~~  392 (445)
                           ...+...|.+.+|.+...|.
T Consensus        85 ~~~~~~~~f~~~D~~~~g~i~~~e~  109 (178)
T d1s6ca_          85 VHEKLRWTFNLYDINKDGYINKEEM  109 (178)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             hHHHHHHHHHhhccCCCCeecHHHH
Confidence                 11334446666676665553

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.01  E-value=3.7e-07  Score=77.31  Aligned_cols=122  Identities=17%  Similarity=0.139  Sum_probs=79.8

Q ss_pred             ccchHHHhccc-cccCCCCCcccHHHHHHHHHHhccCCCCCCCCHH-----------HHHHHHHHhcCCCCceeeHHHHH
Q 013328          300 ASLTETDAFAF-LKADNDGDYITYSGFCEALEQLNLTGHKHGLADE-----------ETKDLWVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       300 ~~~~~~~~F~~-~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~-----------~~~~~~~~~d~~~~g~i~~~eF~  367 (445)
                      +...++.+|.. +|.|++ |.|+.+||+.+|..++.... ......           ..+.+....|.+++|.|+++||.
T Consensus         6 q~~~i~~~F~~~~D~d~d-G~Is~~Ef~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~   83 (185)
T d2sasa_           6 QKQKIKFTFDFFLDMNHD-GSIQDNDFEDMMTRYKEVNK-GSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL   83 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCC-CcCCHHHHHHHHHHhccccC-CCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhh
Confidence            34568899986 699999 99999999999987631000 011111           12455677899999999999998


Q ss_pred             HHHhc-------------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCc
Q 013328          368 QRIWK-------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  428 (445)
Q Consensus       368 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (445)
                      ..+..                   ...+...|.+..|.+...|.......+|++       ..++..  .-..+|.+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~-------~~~~~~--~f~~~D~d~dG  154 (185)
T d2sasa_          84 AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ-------CADVPA--VYNVITDGGKV  154 (185)
T ss_dssp             HHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCC-------CSSHHH--HHHHHHTTTTS
T ss_pred             HHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCC-------HHHHHH--HHHHcCCCCCC
Confidence            65522                   123355567777888777765555555532       222222  23457888899


Q ss_pred             ceeE
Q 013328          429 RLTV  432 (445)
Q Consensus       429 ~~~~  432 (445)
                      .|+.
T Consensus       155 ~i~~  158 (185)
T d2sasa_         155 TFDL  158 (185)
T ss_dssp             CCSH
T ss_pred             CCcH
Confidence            9875

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.96  E-value=7.2e-07  Score=74.63  Aligned_cols=122  Identities=11%  Similarity=0.062  Sum_probs=82.2

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHH-----------HHHHHHhcCCCCceeeHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET-----------KDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~-----------~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      .+.++++|+.+|.|++ |.|+.+||+.++..++... .......++           +.++...|.+++|.|++.+++..
T Consensus         6 ~~~l~~~F~~~D~d~d-G~Is~~Ef~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   83 (176)
T d1nyaa_           6 SDRLKKRFDRWDFDGN-GALERADFEKEAQHIAEAF-GKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRV   83 (176)
T ss_dssp             HHHHHHHHHHCCSSCC-SSBCSHHHHHHHHHHHHHT-SSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHc-CCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence            3568999999999999 9999999999998763100 022322222           44566778999999999999865


Q ss_pred             Hhc------------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCccee
Q 013328          370 IWK------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  431 (445)
Q Consensus       370 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (445)
                      +..                  ...+...|.+..|.+...|.......+|+       .+.++..  .-+.+|.+.+|.|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~-------~~~~~~~--~f~~~D~d~dG~i~  154 (176)
T d1nyaa_          84 TENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM-------SKAEAAE--AFNQVDTNGNGELS  154 (176)
T ss_dssp             HHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC-------CHHHHHH--HHHHHCTTCSSEEE
T ss_pred             HhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC-------cHHHHHH--HHHHHCCCCCCcEe
Confidence            532                  11234456777888887776555555553       2233333  44568999999987


Q ss_pred             EE
Q 013328          432 VV  433 (445)
Q Consensus       432 ~~  433 (445)
                      ..
T Consensus       155 ~~  156 (176)
T d1nyaa_         155 LD  156 (176)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=9.4e-06  Score=68.68  Aligned_cols=61  Identities=25%  Similarity=0.389  Sum_probs=47.6

Q ss_pred             HHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          304 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       304 ~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ...+|+.+|.+++ |.|+..||..++..+.     ....++.++.+++.+|.|+||.|+.+||...+
T Consensus        62 ~~~if~~~d~~~d-g~I~~~EF~~~l~~~~-----~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~  122 (187)
T d1g8ia_          62 ATFVFNVFDENKD-GRIEFSEFIQALSVTS-----RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV  122 (187)
T ss_dssp             HHHHHHHHCTTCS-SEEEHHHHHHHHHHHH-----HCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHhCcCCC-CCCcHHHHHHHHHHhc-----cCchhhhHHHHHHHHhcCCCCeEcHHHHHHHH
Confidence            4568888888888 8888888888887764     33456678888888888888888888887554

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=97.89  E-value=1.1e-06  Score=74.75  Aligned_cols=121  Identities=12%  Similarity=0.062  Sum_probs=80.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHH-----HHhccCCCCCCCCHHHHHHHH-----HHhcCCCCceeeHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEAL-----EQLNLTGHKHGLADEETKDLW-----VQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l-----~~~g~~~~~~~~~~~~~~~~~-----~~~d~~~~g~i~~~eF~~~  369 (445)
                      ....++++|+.+|.|++ |.|+.+||..++     +.+|     ..++..++.+++     ...+.+.++.|+++||+..
T Consensus        12 ~i~r~k~~F~~~D~d~d-G~I~~~E~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~   85 (189)
T d1qv0a_          12 WIKRHKHMFDFLDINGN-GKITLDEIVSKASDDICAKLE-----ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG   85 (189)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTHHHHTT-----CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCchhHHHHHHHHHHHhhhccccCCCceehHHHHHH
Confidence            34568899999999999 999999998754     4556     455555554443     3445677889999999866


Q ss_pred             Hhc---------------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCc
Q 013328          370 IWK---------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  428 (445)
Q Consensus       370 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (445)
                      +..                     ...+...|.+.+|.++..|.......+|...+...     +..  +-..+|.+.||
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~-----~~~--lf~~~D~d~dG  158 (189)
T d1qv0a_          86 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED-----CEA--TFRHCDLDNAG  158 (189)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHH-----HHH--HHHHSCCCTTS
T ss_pred             HHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHH-----HHH--HHHHhCCCCCC
Confidence            522                     11345567788888888776666666665544332     233  44578899999


Q ss_pred             ceeEE
Q 013328          429 RLTVV  433 (445)
Q Consensus       429 ~~~~~  433 (445)
                      .|+..
T Consensus       159 ~Is~~  163 (189)
T d1qv0a_         159 DLDVD  163 (189)
T ss_dssp             CEEHH
T ss_pred             cEeHH
Confidence            98753

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.84  E-value=9.4e-06  Score=68.23  Aligned_cols=88  Identities=9%  Similarity=0.021  Sum_probs=63.0

Q ss_pred             hccchHHHhcccc-ccCCCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc----
Q 013328          299 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  372 (445)
Q Consensus       299 ~~~~~~~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~----  372 (445)
                      -...+++.+|+.| +.+++ |.|+..||+.+|..++     .. .....++.++..+|.+++|.|+|+||+..+..    
T Consensus        18 fs~~ei~~l~~~F~~~~~~-g~i~~~ef~~~l~~~~-----~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~   91 (181)
T d1bjfa_          18 FTEHEIQEWYKGFLRDCPS-GHLSMEEFKKIYGNFF-----PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG   91 (181)
T ss_dssp             CCHHHHHHHHHHHHHHSTT-SEEEHHHHHHHHTTTS-----SSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSS
T ss_pred             CCHHHHHHHHHHHHhhCCC-CCcCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhh
Confidence            3344566666654 44788 9999999999998876     33 34566789999999999999999999976633    


Q ss_pred             ------cCccccccccCCcccccccc
Q 013328          373 ------TTWSDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       373 ------~~~~~~~~~~~~~~~~~~~~  392 (445)
                            ..++...|.+.+|.+...|.
T Consensus        92 ~~~~~~~~~f~~~D~d~dg~i~~~E~  117 (181)
T d1bjfa_          92 KLEQKLKWAFSMYDLDGNGYISKAEM  117 (181)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             chHHHHHHHHHHhccCCCCeecHHHH
Confidence                  12334556677777666553

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=97.79  E-value=2.7e-06  Score=71.98  Aligned_cols=118  Identities=12%  Similarity=0.067  Sum_probs=78.6

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHH-----HhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWV-----QADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~-----~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ..++++|+.+|.|++ |+|+.+||..++..     +|     ..++..++...+.     ......++.+++.+|+..+.
T Consensus        12 ~~~k~~F~~~D~d~d-G~Is~~Ef~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (187)
T d1uhka1          12 GRHKHMFNFLDVNHN-GKISLDEMVYKASDIVINNLG-----ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWK   85 (187)
T ss_dssp             HHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHhc-----cCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHH
Confidence            567889999999999 99999999877654     44     3344444444333     33455667799999875542


Q ss_pred             c---------------------cCccccccccCCcccccccccccccccCeeeeccccCCcccccCCCCCCCCCCCCcce
Q 013328          372 K---------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARL  430 (445)
Q Consensus       372 ~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (445)
                      .                     ...+...|++.+|.+...|.......+|...+.+.     +..  .-+.+|.+.+|+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-----~~~--lf~~~D~d~dG~I  158 (187)
T d1uhka1          86 KLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED-----CEE--TFRVCDIDESGQL  158 (187)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHH-----HHH--HHHHSCCCTTSCE
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHH-----HHH--HHHHhCCCCCCCE
Confidence            1                     11234557788888888877666666776544333     222  4456788889988


Q ss_pred             eE
Q 013328          431 TV  432 (445)
Q Consensus       431 ~~  432 (445)
                      +-
T Consensus       159 s~  160 (187)
T d1uhka1         159 DV  160 (187)
T ss_dssp             EH
T ss_pred             eH
Confidence            74

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=3.3e-05  Score=64.16  Aligned_cols=83  Identities=11%  Similarity=0.094  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhhhhccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCC-------CCCCHHHHHHHHHHhcCCCC-
Q 013328          287 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHK-------HGLADEETKDLWVQADIDGN-  358 (445)
Q Consensus       287 ~~v~~~~~~~~~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~-------~~~~~~~~~~~~~~~d~~~~-  358 (445)
                      +.|...+..+.  ...++..+|+.+|.|++ |.||.+||+..|....  +.+       ...+.+.++.++..+..+.+ 
T Consensus        65 ~eF~~~~~~l~--~r~ei~~~F~~~d~d~~-~~it~~el~~fL~~~Q--~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~  139 (170)
T d2zkmx1          65 PVYKSFLMSLC--PRPEIDEIFTSYHAKAK-PYMTKEHLTKFINQKQ--RDSRLNSLLFPPARPDQVQGLIDKYEPSGIN  139 (170)
T ss_dssp             HHHHHHHHHHS--CCHHHHTTCC---------CCCHHHHHHHHHHTC--C---------------CHHHHHHHHCCC---
T ss_pred             HHHHHHHhccC--CHHHHHHHHHHHcCCCC-CcccHHHHHHHHHHHh--cchhhhhhccccCCHHHHHHHHHHHcccccc
Confidence            34444433333  34578899999999999 9999999999998764  110       12466778999999987654 


Q ss_pred             ---ceeeHHHHHHHHhccC
Q 013328          359 ---GVVDYKEFQQRIWKTT  374 (445)
Q Consensus       359 ---g~i~~~eF~~~~~~~~  374 (445)
                         |.|++++|+.+|..+.
T Consensus       140 ~~~~~ls~d~F~~fL~S~e  158 (170)
T d2zkmx1         140 AQRGQLSPEGMVWFLCGPE  158 (170)
T ss_dssp             -----CCHHHHHHHHHSTT
T ss_pred             ccCCeECHHHHHHHHcCcc
Confidence               8899999998887643

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.9e-05  Score=63.22  Aligned_cols=64  Identities=11%  Similarity=0.238  Sum_probs=52.7

Q ss_pred             hHHHhccccccC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          303 TETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       303 ~~~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      -..++|+.||.+ ++ |.|+.+||..+|..+.-    ....++.++.+++.+|.|++|.|+.+|+.+.+.
T Consensus        58 ~~~rif~~fd~~~~~-g~I~f~EFv~~l~~~~~----~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~  122 (180)
T d1xo5a_          58 FKERICRVFSTSPAK-DSLSFEDFLDLLSVFSD----TATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN  122 (180)
T ss_dssp             THHHHHHHHCCSTTC-CEECHHHHHHHHHHHST----TSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCC-CcCcHHHHHHHHHHHhh----cCCHHHHHHHhhccccCCCCCeeeHHHHHHHHH
Confidence            356789999987 68 99999999999977640    224466799999999999999999999986553

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=97.46  E-value=7.6e-05  Score=56.86  Aligned_cols=59  Identities=19%  Similarity=0.327  Sum_probs=46.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++.+++..+|  .+ |.|+..||..++..       ..-++++++++|+.+|.|++|.|+.+|+.+.+
T Consensus         9 ~di~~~~~~~~--~~-G~idf~eF~~~~~~-------~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l   67 (109)
T d5pala_           9 DDINKAISAFK--DP-GTFDYKRFFHLVGL-------KGKTDAQVKEVFEILDKDQSGFIEEEELKGVL   67 (109)
T ss_dssp             HHHHHHHHHTC--ST-TCCCHHHHHHHHTC-------TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHH
T ss_pred             HHHHHHHHhcC--CC-CcCcHHHHHHHHHh-------cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHH
Confidence            34556666554  56 99999999866532       23568899999999999999999999998555

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=1.9e-06  Score=71.95  Aligned_cols=84  Identities=5%  Similarity=-0.126  Sum_probs=50.1

Q ss_pred             HHHhccc--cccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc-------cC
Q 013328          304 ETDAFAF--LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------TT  374 (445)
Q Consensus       304 ~~~~F~~--~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~-------~~  374 (445)
                      ++++|..  +|.|++ |+|+.+||+++|..++..   .....+.+..++...|.+++|.|+|+||+..+..       ..
T Consensus         7 l~k~~~k~~~d~n~d-G~Is~~el~k~l~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~   82 (170)
T d2zkmx1           7 LDKILVKLKMQLNSE-GKIPVKNFFQMFPADRKR---VEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDE   82 (170)
T ss_dssp             HHHHHHHHHHSCCTT-SCEEHHHHHHHSCSCHHH---HHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHT
T ss_pred             HHHHHHHHhcccCCC-CCCcHHHHHHHHHHhhhh---HHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHH
Confidence            4455544  699999 999999999998654300   1122345666777889999999999999865532       22


Q ss_pred             ccccccccCCccccccc
Q 013328          375 WSDQRNDLNDEDEDGFV  391 (445)
Q Consensus       375 ~~~~~~~~~~~~~~~~~  391 (445)
                      .+...+.+..+.+...+
T Consensus        83 ~F~~~d~d~~~~it~~e   99 (170)
T d2zkmx1          83 IFTSYHAKAKPYMTKEH   99 (170)
T ss_dssp             TCC--------CCCHHH
T ss_pred             HHHHHcCCCCCcccHHH
Confidence            34455555555444443

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=97.43  E-value=4.8e-05  Score=58.00  Aligned_cols=59  Identities=12%  Similarity=0.241  Sum_probs=45.3

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++.+++..+  +++ |.|+..||..++..       ...++++++.+|+.+|.|++|.|+.+|+...+
T Consensus         9 eeI~~~~~~~--d~d-G~idf~EF~~~~~~-------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l   67 (109)
T d1pvaa_           9 DDIKKALDAV--KAE-GSFNHKKFFALVGL-------KAMSANDVKKVFKAIDADASGFIEEEELKFVL   67 (109)
T ss_dssp             HHHHHHHHHT--CST-TCCCHHHHHHHHTC-------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHhc--CCC-CCCcHHHHHHHHHH-------ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHH
Confidence            3444555544  577 99999999877543       23668899999999999999999999997443

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.23  E-value=0.00026  Score=53.78  Aligned_cols=60  Identities=13%  Similarity=0.175  Sum_probs=47.6

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      .++.+++..+  +.+ |.|+..||..++....       .++++++.+|+.+|.|++|.|+.+||...+.
T Consensus         9 ~~i~~~~~~~--~~~-~~i~f~eF~~~~~~~~-------~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~   68 (109)
T d1rwya_           9 EDIKKAIGAF--TAA-DSFDHKKFFQMVGLKK-------KSADDVKKVFHILDKDKSGFIEEDELGSILK   68 (109)
T ss_dssp             HHHHHHHHTT--CST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHSTTCSSEECHHHHHTHHH
T ss_pred             HHHHHHHHhc--ccC-CCcCHHHHHHHHcccc-------CCHHHHHHHhhcccCCCCCcCcHHHHHHHHH
Confidence            4566666666  456 8899999988765433       5688999999999999999999999986553

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.21  E-value=0.00013  Score=40.15  Aligned_cols=29  Identities=21%  Similarity=0.412  Sum_probs=25.8

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++|+..+|+.||+|+||.||-+||...+
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~il   30 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEIL   30 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHH
Confidence            46789999999999999999999998544

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00063  Score=52.23  Aligned_cols=69  Identities=14%  Similarity=0.067  Sum_probs=49.3

Q ss_pred             hccchHHHhccccc---cCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCC--------ceeeHHHHH
Q 013328          299 RASLTETDAFAFLK---ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN--------GVVDYKEFQ  367 (445)
Q Consensus       299 ~~~~~~~~~F~~~D---~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~--------g~i~~~eF~  367 (445)
                      .....+.+.|+...   ...+ |.|+.++|+.++..+.-   ....+..-++.|+..||.|++        |.|+|.||+
T Consensus        25 ~ei~~l~~~Fk~~~~~~~~p~-g~i~~~~F~~~~~~~f~---~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv  100 (118)
T d1tuza_          25 KKVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYLE---VDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVS  100 (118)
T ss_dssp             CCHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHTT---CSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHH
T ss_pred             HHHHHHHHHHhccccccCCcc-cccCHHHHHHHHHHhCC---CCCchHHHHHHHHHHHccccccccccCCCceeeHHHHH
Confidence            34444555554322   2456 99999999999988740   012356788999999999976        899999999


Q ss_pred             HHHh
Q 013328          368 QRIW  371 (445)
Q Consensus       368 ~~~~  371 (445)
                      .++.
T Consensus       101 ~~LS  104 (118)
T d1tuza_         101 CYFS  104 (118)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7663

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=97.16  E-value=0.00022  Score=40.90  Aligned_cols=29  Identities=28%  Similarity=0.523  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++++++.|+.||+|+||.|+.+|+...|
T Consensus         1 seeel~eAF~~FDkDg~G~Is~~EL~~vm   29 (33)
T d2hf5a1           1 SEEEIREAFRVFDKDGNGYISAAELRHVM   29 (33)
T ss_dssp             CHHHHHHHHHHHSSSCCSCBCHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            47899999999999999999999998544

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.87  E-value=0.00031  Score=53.18  Aligned_cols=58  Identities=19%  Similarity=0.245  Sum_probs=43.5

Q ss_pred             hHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          303 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       303 ~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ++..+.+..  +.+ |.|+..+|...+   ++    ...+.++++++|+.+|.|++|.|+++||.+.+
T Consensus        10 dI~~~l~~~--~~~-~s~~~~~F~~~~---~~----~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l   67 (108)
T d1rroa_          10 DIAAALQEC--QDP-DTFEPQKFFQTS---GL----SKMSASQVKDIFRFIDNDQSGYLDGDELKYFL   67 (108)
T ss_dssp             HHHHHHHHT--CST-TCCCHHHHHHHH---SG----GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGG
T ss_pred             HHHHHHHhc--ccC-CCccHHHHHHHH---cc----CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHH
Confidence            444444443  466 889999885543   32    23578899999999999999999999998655

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=96.68  E-value=0.001  Score=50.09  Aligned_cols=59  Identities=15%  Similarity=0.179  Sum_probs=46.0

Q ss_pred             chHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++..+++..|  .+ |.|+..||..++..-+       -+.++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~di~~~~~~~~--~~-gsi~~~eF~~~~~l~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (107)
T d2pvba_           8 ADVAAALAACS--AA-DSFKHKEFFAKVGLAS-------KSLDDVKKAFYVIDQDKSGFIEEDELKLFL   66 (107)
T ss_dssp             HHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHhcc--CC-CCcCHHHHHHHHhccc-------CCHHHHHHHHHhhccCCCCcCcHHHHHHHH
Confidence            44566666554  45 7899999987665333       568899999999999999999999998543

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00031  Score=55.75  Aligned_cols=59  Identities=15%  Similarity=0.225  Sum_probs=48.1

Q ss_pred             hHHHhccccccCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHH
Q 013328          303 TETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  369 (445)
Q Consensus       303 ~~~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~  369 (445)
                      .+.--|..+|.|+ | |.|+..||+.+...+-       ..+.-++.++...|.|+||.|++.|+...
T Consensus        78 ~v~W~F~~LD~n~~D-~~L~~~EL~~l~~~L~-------~~e~C~~~F~~~CD~n~D~~Is~~EW~~C  137 (151)
T d1sraa_          78 PVHWQFGQLDQHPID-GYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGC  137 (151)
T ss_dssp             HHHHHHHHHCCTTCS-SEECTTTTGGGGSTTS-------TTGGGHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred             cceeehhhcCCCCCC-CccCHHHHHHHHHhhc-------CCchHHHHHHHHhcCCCCCcCCHHHHHHH
Confidence            4455699999994 8 9999999998644332       45666899999999999999999999843

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.16  E-value=0.0016  Score=44.06  Aligned_cols=30  Identities=27%  Similarity=0.467  Sum_probs=26.5

Q ss_pred             CHHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          342 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       342 ~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++++|+.+|.|++|.|+.+||...+.
T Consensus         1 Seeel~~aF~~fD~d~~G~I~~~el~~~l~   30 (65)
T d1fw4a_           1 SEEEIREAFRVFDKDGNGYISAAELRHVMT   30 (65)
T ss_dssp             CCHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence            367899999999999999999999986553

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=95.73  E-value=0.0049  Score=43.03  Aligned_cols=34  Identities=18%  Similarity=0.192  Sum_probs=29.4

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ..-++++++++|+.+|.|++|.|+.+||.+.+..
T Consensus         4 e~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~   37 (77)
T d1oqpa_           4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKE   37 (77)
T ss_dssp             TSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHcCCCCCEechHHHHHHHHH
Confidence            5567789999999999999999999999976643

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.62  E-value=0.0042  Score=41.21  Aligned_cols=29  Identities=14%  Similarity=0.161  Sum_probs=25.6

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +++.+.|+.+|.+++|.|+.+||.+.|..
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~   29 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTG   29 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHH
Confidence            57899999999999999999999976643

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=95.42  E-value=0.0067  Score=42.80  Aligned_cols=34  Identities=26%  Similarity=0.458  Sum_probs=29.4

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...++++++++|+.+|.|++|.|+.+||...+..
T Consensus        10 ~~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~   43 (81)
T d1fi5a_          10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQA   43 (81)
T ss_dssp             CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence            3457889999999999999999999999976643

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.33  E-value=0.012  Score=40.68  Aligned_cols=34  Identities=21%  Similarity=0.391  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          339 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       339 ~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ...+++++..+|+.+|.|++|.|+.+||...|..
T Consensus         4 ~~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~   37 (75)
T d1jc2a_           4 KGKSEEELANCFRIFDKNADGFIDIEELGEILRA   37 (75)
T ss_dssp             CCCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHh
Confidence            3467899999999999999999999999866633

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=95.17  E-value=0.012  Score=41.43  Aligned_cols=33  Identities=15%  Similarity=0.267  Sum_probs=28.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ...++.++|+.+|.|++ |.|+.+||..++....
T Consensus        39 ~~~ei~~~~~~~D~d~~-G~I~~~EF~~~~~~~~   71 (81)
T d2opoa1          39 TPDEVRRMMAEIDTDGD-GFISFDEFTDFARANR   71 (81)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHCT
T ss_pred             CHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHCc
Confidence            44678999999999999 9999999999987643

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.16  E-value=0.0078  Score=40.66  Aligned_cols=34  Identities=12%  Similarity=0.182  Sum_probs=29.5

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      .-...++.++|+.+|.|++ |.|+.+||..+|.++
T Consensus        33 ~~~~~~i~~~~~~~D~d~d-g~I~~~EF~~~m~~~   66 (67)
T d1tiza_          33 YFTQEDIVKFFEEIDVDGN-GELNADEFTSCIEKM   66 (67)
T ss_dssp             TSCHHHHHHHHHHHCCSSS-SEECHHHHHHHHHTC
T ss_pred             ccchHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHh
Confidence            3455789999999999999 999999999998753

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=95.08  E-value=0.0025  Score=45.87  Aligned_cols=47  Identities=19%  Similarity=0.371  Sum_probs=34.4

Q ss_pred             CCCCcccHHHHHHHHHHhccCCCCCCCCHH---HHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          315 NDGDYITYSGFCEALEQLNLTGHKHGLADE---ETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       315 ~~~G~i~~~el~~~l~~~g~~~~~~~~~~~---~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      ++ |.|+..+-.     +.     ..++++   +++++|..+|.|++|.|+++||...|..
T Consensus         2 ~~-g~id~~~~~-----ma-----~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~   51 (87)
T d1s6ja_           2 SS-GHIDDDDKH-----MA-----ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR   51 (87)
T ss_dssp             CS-SSSSSHHHH-----SS-----SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred             CC-CccCchHHH-----HH-----hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            56 888888733     22     223333   4688999999999999999999976643

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.58  E-value=0.016  Score=40.24  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=26.2

Q ss_pred             CCCHHH---HHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          340 GLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       340 ~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ++++++   ++++|..+|.|++|.|+.+|+...+.
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~   37 (77)
T d1f54a_           3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR   37 (77)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHH
Confidence            466665   56679999999999999999987663

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.0066  Score=44.65  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=23.5

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      .++.+|+.+|.|+||.|+.+||...+
T Consensus        17 ~~r~~F~~~D~DgdG~i~~~El~~~l   42 (99)
T d1snla_          17 NPKTFFILHDINSDGVLDEQELEALF   42 (99)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            36899999999999999999998766

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.062  Score=36.23  Aligned_cols=59  Identities=15%  Similarity=0.282  Sum_probs=46.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC-----CCCceeeHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI-----DGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~-----~~~g~i~~~eF~~~~~~  372 (445)
                      ..+++.++|+.+- ++. .+|+.+||+..            ++.++++-++..+-.     ...|..||..|++.++.
T Consensus         6 TaEqv~~aFr~lA-~~K-pyVT~~dL~~~------------L~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g   69 (73)
T d1h8ba_           6 TAEQVIASFRILA-SDK-PYILAEELRRE------------LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG   69 (73)
T ss_dssp             THHHHHHHHHHHT-TSC-SSBCHHHHHHH------------SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHh-CCC-CeeCHHHHHhh------------cCHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence            3467888999984 556 89999999865            567789999988853     23678999999987764

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.10  E-value=0.019  Score=39.74  Aligned_cols=32  Identities=9%  Similarity=0.238  Sum_probs=28.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ...++.++|+.+|.|++ |.|+.+||..+|.++
T Consensus        43 ~~~ei~~~~~~~D~d~d-G~I~f~EF~~~m~~~   74 (76)
T d1qx2a_          43 GMSTLDEMIEEVDKNGD-GEVSFEEFLVMMKKI   74 (76)
T ss_dssp             TSCSHHHHHHHHCTTCS-SEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhcCCC-CcCcHHHHHHHHHHH
Confidence            34578999999999999 999999999998775

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.08  E-value=0.047  Score=39.39  Aligned_cols=69  Identities=7%  Similarity=0.026  Sum_probs=53.4

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCC----CceeeHHHHHHHHhccC
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDG----NGVVDYKEFQQRIWKTT  374 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~----~g~i~~~eF~~~~~~~~  374 (445)
                      ..++..+|..+- ++. +.++.++|...|+.--  ++ ...+.+.+.+++..+..+.    .+.+++++|+.+|..+.
T Consensus         7 R~ei~~if~~ys-~~~-~~mt~~~f~~FL~~eQ--~~-~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~   79 (94)
T d1qasa1           7 RAEIDRAFEEAA-GSA-ETLSVERLVTFLQHQQ--RE-EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD   79 (94)
T ss_dssp             CHHHHHHHHHHH-TTS-SSCBHHHHHHHHHHTS--CC-TTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSST
T ss_pred             cHHHHHHHHHHh-CCC-CccCHHHHHHHHHHHc--CC-ccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCcc
Confidence            457788898884 344 6899999999999853  11 2467888999999998763    37899999999887754

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=93.96  E-value=0.022  Score=39.02  Aligned_cols=28  Identities=29%  Similarity=0.424  Sum_probs=23.4

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      +++++|..+|.|++|.|+++||...+..
T Consensus         9 el~~~F~~~D~d~~G~I~~~el~~~l~~   36 (73)
T d2pq3a1           9 EFKEAFSLFDKDGDGTITTKELGTVMRS   36 (73)
T ss_dssp             HHHHHHHHTCTTSSSEEEGGGHHHHHHH
T ss_pred             HHHHHHHHHcCCCCceEeHHHHHHHHHH
Confidence            4567799999999999999999866643

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.73  E-value=0.018  Score=41.87  Aligned_cols=48  Identities=15%  Similarity=0.108  Sum_probs=35.8

Q ss_pred             HHHHHHHHhcCCCCceeeHHHHHHHHhccCcc--------ccccccCCcccccccc
Q 013328          345 ETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS--------DQRNDLNDEDEDGFVK  392 (445)
Q Consensus       345 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~--------~~~~~~~~~~~~~~~~  392 (445)
                      ..+++|+.+|.|++|.|+.+|+...+......        ...|.+.+|.++-.|.
T Consensus        11 ~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF   66 (95)
T d1c07a_          11 KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF   66 (95)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHH
Confidence            46789999999999999999999766543222        3446677777776664

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=93.49  E-value=0.034  Score=40.13  Aligned_cols=34  Identities=12%  Similarity=0.303  Sum_probs=30.0

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .....+.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        49 ~~~~~~~~i~~~~D~n~D-G~I~F~EF~~lm~~l~   82 (93)
T d3c1va1          49 TDEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             CSHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCC-CCCCHHHHHHHHHHHH
Confidence            455778999999999999 9999999999988764

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=93.21  E-value=0.02  Score=38.71  Aligned_cols=27  Identities=33%  Similarity=0.605  Sum_probs=24.5

Q ss_pred             HHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          344 EETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       344 ~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      +++.++|+.+|.|++|.|+.+||...+
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l   28 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIM   28 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHH
Confidence            679999999999999999999998544

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=93.18  E-value=0.047  Score=39.23  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=29.0

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|+| |+|+.+||..++..+-
T Consensus        47 ~~~~v~~~~~~~D~n~D-G~I~F~EF~~li~~l~   79 (92)
T d1a4pa_          47 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGLT   79 (92)
T ss_dssp             CTTHHHHHHHHHCTTSS-SCBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHH
Confidence            45678999999999999 9999999999887653

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=92.81  E-value=0.049  Score=38.04  Aligned_cols=31  Identities=29%  Similarity=0.367  Sum_probs=24.9

Q ss_pred             CCHHH---HHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          341 LADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       341 ~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      +++++   ++++|..+|.|++|.|+.+||...+.
T Consensus         8 Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~   41 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR   41 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHH
Confidence            45554   56779999999999999999986653

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.62  E-value=0.035  Score=38.57  Aligned_cols=45  Identities=16%  Similarity=0.284  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhh---hhccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          287 EAVFGMFKCLL---RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       287 ~~v~~~~~~~~---~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      +.+-..+...+   ......+.++|+.+|.|+| |.|+.+||..+|..+
T Consensus        29 ~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~d-G~Idf~EF~~l~~~l   76 (78)
T d1cb1a_          29 EELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD-GEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSS-SSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            44444444443   2234568889999999999 999999999998775

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=92.17  E-value=0.051  Score=39.08  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=29.2

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        50 ~~~~~~~~~~~~D~d~d-G~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1          50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAALT   82 (93)
T ss_dssp             CHHHHHHHHHHHTTTCC-SEECSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            45678899999999999 9999999999987754

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=92.01  E-value=0.08  Score=37.51  Aligned_cols=33  Identities=12%  Similarity=0.153  Sum_probs=28.6

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++++.+|.|+| |.|+.+||-.++..+.
T Consensus        47 ~~~~v~~i~~~~D~n~D-G~IdF~EF~~l~~~la   79 (87)
T d1xk4a1          47 RKKGADVWFKELDINTD-GAVNFQEFLILVIKMG   79 (87)
T ss_dssp             HTTCHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34568899999999999 9999999999988754

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=91.80  E-value=0.07  Score=38.36  Aligned_cols=33  Identities=12%  Similarity=0.210  Sum_probs=29.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++++.+|.|+| |.|+.+||..+|..+.
T Consensus        50 ~~~~~~~~~~~lD~n~D-g~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_          50 RECDYNKFMSVLDTNKD-CEVDFVEYVRSLACLC   82 (93)
T ss_dssp             CHHHHHHHHHHHHHTTT-CEECHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            45789999999999999 9999999999887764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.55  E-value=0.15  Score=35.47  Aligned_cols=29  Identities=10%  Similarity=0.048  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHhcCCCCceeeHHHHHHHHh
Q 013328          343 DEETKDLWVQADIDGNGVVDYKEFQQRIW  371 (445)
Q Consensus       343 ~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  371 (445)
                      ...+.++++.+|.+++|.|+.+||.+.+.
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~   47 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICN   47 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHH
Confidence            46789999999999999999999997653

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=91.20  E-value=0.11  Score=37.75  Aligned_cols=45  Identities=9%  Similarity=0.174  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhh---hhccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          287 EAVFGMFKCLL---RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       287 ~~v~~~~~~~~---~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ..+-.++....   ......+.++|+.+|.|+| |.|+.+||-.++..+
T Consensus        36 ~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~D-G~IdF~EF~~l~~~l   83 (98)
T d1yuta1          36 NEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQD-SELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCC-SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccCCCHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHH
Confidence            44444444433   2234568999999999999 999999999988765

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=90.93  E-value=0.12  Score=36.46  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=28.4

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ....+.++|+.+|.|+| |.|+.+||-.++..+
T Consensus        49 ~~~~v~~~~~~lD~n~D-g~idF~EF~~li~~l   80 (87)
T d1e8aa_          49 DKAVIDEIFQGLDANQD-EQVDFQEFISLVAIA   80 (87)
T ss_dssp             SHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHH
Confidence            34679999999999999 999999999888765

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=90.66  E-value=0.11  Score=36.94  Aligned_cols=34  Identities=12%  Similarity=0.204  Sum_probs=29.6

Q ss_pred             hhccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          298 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       298 ~~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ......+.++++.+|.|+| |.|+.+||-.++..+
T Consensus        46 ~~~~~~~~~~~~~lD~d~D-g~IdF~EF~~l~~~l   79 (89)
T d1k8ua_          46 KLQDAEIARLMEDLDRNKD-QEVNFQEYVTFLGAL   79 (89)
T ss_dssp             GTTSHHHHHHHHHHHHTTT-CEEEHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhcCCCC-CCCcHHHHHHHHHHH
Confidence            3455779999999999999 999999999988765

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.40  E-value=0.045  Score=39.28  Aligned_cols=52  Identities=13%  Similarity=-0.015  Sum_probs=36.5

Q ss_pred             CCHHH---HHHHHHHhcCCCCceeeHHHHHHHHhccCc--------cccccccCCcccccccc
Q 013328          341 LADEE---TKDLWVQADIDGNGVVDYKEFQQRIWKTTW--------SDQRNDLNDEDEDGFVK  392 (445)
Q Consensus       341 ~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--------~~~~~~~~~~~~~~~~~  392 (445)
                      ++++|   .+++|+.+|.|++|.|+.+|+...+.....        ....|.+..|.++-.|.
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF   65 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEF   65 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHH
Confidence            44544   467899999999999999999976644222        13446677777766664

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=90.24  E-value=0.17  Score=35.23  Aligned_cols=32  Identities=6%  Similarity=0.132  Sum_probs=28.1

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      -...++.++|+.+|.|++ |.|+.+||..+|.+
T Consensus        49 ~t~~el~~~i~~~D~d~~-G~I~f~eFl~im~~   80 (82)
T d1wrka1          49 PTPEELQEMIDEVDEDGS-GTVDFDEFLVMMVR   80 (82)
T ss_dssp             CCHHHHHHHHHTTCTTCC-SSBCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHh
Confidence            445789999999999999 99999999988764

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=89.79  E-value=0.066  Score=39.07  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=29.1

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|+| |.|+.+||..++..+.
T Consensus        50 ~~~~v~~~~~~~D~n~D-G~I~F~EF~~li~~l~   82 (100)
T d1psra_          50 GTNYLADVFEKKDKNED-KKIDFSEFLSLLGDIA   82 (100)
T ss_dssp             TCCGGGTHHHHHCTTCS-SCBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH
Confidence            34678899999999999 9999999999988765

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.11  E-value=0.11  Score=39.08  Aligned_cols=49  Identities=16%  Similarity=0.262  Sum_probs=39.8

Q ss_pred             CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC------CCCceeeHHHHHHHH
Q 013328          314 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI------DGNGVVDYKEFQQRI  370 (445)
Q Consensus       314 ~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~------~~~g~i~~~eF~~~~  370 (445)
                      +.. +.|+.++|.++.+...       +++.||++|.+.|..      ..+|.|++++|...+
T Consensus         3 ~~~-s~l~p~~l~~L~~~T~-------fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~   57 (118)
T d1tuza_           3 KER-GLISPSDFAQLQKYME-------YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFL   57 (118)
T ss_dssp             CCC-SCSCHHHHHHHHHHHH-------HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHH
T ss_pred             ccc-CCCCHHHHHHHHHHcC-------CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHH
Confidence            345 7899999999998877       778889999998832      357999999998654

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=86.98  E-value=0.67  Score=29.74  Aligned_cols=62  Identities=15%  Similarity=0.206  Sum_probs=50.1

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcC-CCC-ceeeHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI-DGN-GVVDYKEFQQ  368 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~-~~~-g~i~~~eF~~  368 (445)
                      ..+..++|..||.|.. .--.+++--.+|.++|     +..+..|.+.+|++.-. .|| ..|.-+|++.
T Consensus        13 kdecmkifdifdrnae-niapvsdtmdmltklg-----qtytkreteaimkeargpkgdkknigpeewlt   76 (86)
T d1j7qa_          13 KDECMKIFDIFDRNAE-NIAPVSDTMDMLTKLG-----QTYTKRETEAIMKEARGPKGDKKNIGPEEWLT   76 (86)
T ss_dssp             HHHHHHHHHHHSTTTT-SCBCHHHHHHHHHHTS-----CCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHH
T ss_pred             HHHHHHHHHHHhcccc-ccCCcchHHHHHHHhh-----hHHhHHHHHHHHHHhcCCCCccccCCHHHHHH
Confidence            3456678999999998 8888999999999999     88999999999998732 222 3577888874

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.17  E-value=0.14  Score=37.11  Aligned_cols=32  Identities=16%  Similarity=0.238  Sum_probs=28.3

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ....+.++|+..|.|++ |.|+.+||..+|+-+
T Consensus        43 ~~~~L~~i~~~~D~d~d-G~L~~~EF~~am~Li   74 (99)
T d1qjta_          43 PDLILGKIWDLADTDGK-GVLSKQEFFVALRLV   74 (99)
T ss_dssp             CHHHHHHHHHHHCCSSS-SSCCSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CccCHHHHHHHHHHH
Confidence            45678999999999999 999999999988754

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=84.90  E-value=0.49  Score=33.39  Aligned_cols=33  Identities=12%  Similarity=0.200  Sum_probs=28.5

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      ....+.++|+.+|.|+| |.|+.+|+-.++..+.
T Consensus        50 d~~~~d~~m~~LD~n~D-g~vdF~EF~~li~~la   82 (90)
T d3cr5x1          50 EQEVVDKVMETLDSDGD-GECDFQEFMAFVAMIT   82 (90)
T ss_dssp             SHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHHH
Confidence            34679999999999999 9999999988877653

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=84.37  E-value=0.12  Score=34.99  Aligned_cols=49  Identities=12%  Similarity=0.206  Sum_probs=36.5

Q ss_pred             ccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHHhc
Q 013328          312 KADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  372 (445)
Q Consensus       312 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  372 (445)
                      |.|+| |.|+..++..+++.+ |     .. +..+    ...+|.|+||.|+..+++ .+.+
T Consensus         8 DvN~D-G~Vd~~D~~~~~~~i~~-----~~-~~~~----~~~aDvn~DG~Id~~D~~-~l~~   57 (71)
T d1dava_           8 DVNDD-GKVNSTDAVALKRYVLR-----SG-ISIN----TDNADLNEDGRVNSTDLG-ILKR   57 (71)
T ss_dssp             CSSSS-SBSSGGGHHHHHHHHHC-----SC-SCCC----GGGTCSSSSSSCSSHHHH-HHHH
T ss_pred             ccCCC-CCCcHHHHHHHHHHHcC-----CC-CcCC----CcceecCCCCCcCHHHHH-HHHH
Confidence            88999 999999999988876 4     11 1111    125799999999999998 4443

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=83.23  E-value=0.35  Score=34.56  Aligned_cols=34  Identities=15%  Similarity=0.215  Sum_probs=29.4

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .....+.++|+.+|.|+| |.|+.+||-.++..+.
T Consensus        49 ~d~~~vd~im~~LD~n~D-g~vdF~EF~~li~~la   82 (95)
T d1qlsa_          49 KDPGVLDRMMKKLDLDSD-GQLDFQEFLNLIGGLA   82 (95)
T ss_dssp             CCTHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH
Confidence            445679999999999999 9999999988887654

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.12  E-value=0.31  Score=34.84  Aligned_cols=31  Identities=13%  Similarity=0.113  Sum_probs=26.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      ....+..++...|.|++ |+|+.+||-.++.-
T Consensus        41 ~~~~L~~Iw~~~D~~~d-G~l~~~EF~~a~~L   71 (95)
T d2jxca1          41 PVDILGRVWELSDIDHD-GMLDRDEFAVAMFL   71 (95)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CeEcHHHHHHHHHH
Confidence            34579999999999999 99999999877654

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=82.66  E-value=0.71  Score=32.77  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=27.8

Q ss_pred             hccchHHHhccccccCCCCCcccHHHHHHHHHHhc
Q 013328          299 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  333 (445)
Q Consensus       299 ~~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~g  333 (445)
                      .....+.++|+.+|.|+| |.|+.+|+-.++..+.
T Consensus        49 ~d~~~vd~~m~~LD~n~D-g~vdF~EF~~li~~la   82 (94)
T d1j55a_          49 KDKDAVDKLLKDLDANGD-AQVDFSEFIVFVAAIT   82 (94)
T ss_dssp             ---CHHHHHHHHHCSSSS-SSEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHHH
Confidence            345789999999999999 9999999988877653

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=81.87  E-value=1.3  Score=28.24  Aligned_cols=47  Identities=19%  Similarity=0.299  Sum_probs=36.5

Q ss_pred             ccCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHH
Q 013328          312 KADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  367 (445)
Q Consensus       312 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~  367 (445)
                      |.|++ |.|+.-++..+..-+ +.    ..+++.+    +...|.|+||.|+....+
T Consensus         2 DvN~D-g~vni~D~~~l~~~il~~----~~~~~~~----~~aaDvn~Dg~i~i~D~~   49 (59)
T d2cclb1           2 DVNGD-GTINSTDLTMLKRSVLRA----ITLTDDA----KARADVDKNGSINAADVL   49 (59)
T ss_dssp             CTTCS-SSCCHHHHHHHHHHHTTS----SCCCHHH----HHHHCTTCSSCCSHHHHH
T ss_pred             CCCCC-CCCcHHHHHHHHHHHhCC----CCCChhh----hhccccCCCCCCCHHHHH
Confidence            67899 999999999888765 41    2344433    467899999999999887

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=81.83  E-value=0.45  Score=32.98  Aligned_cols=30  Identities=10%  Similarity=0.205  Sum_probs=26.1

Q ss_pred             cchHHHhccccccCCCCCcccHHHHHHHHHH
Q 013328          301 SLTETDAFAFLKADNDGDYITYSGFCEALEQ  331 (445)
Q Consensus       301 ~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~  331 (445)
                      ...+.++|+.+|.|+| |.|+.+||-.++..
T Consensus        53 ~~~vd~~m~~LD~n~D-g~vdF~EF~~li~~   82 (83)
T d1xk4c1          53 EKVIEHIMEDLDTNAD-KQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCC-CcCcHHHHHHHHhh
Confidence            3468899999999999 99999999887754

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.81  E-value=0.32  Score=35.87  Aligned_cols=32  Identities=22%  Similarity=0.348  Sum_probs=27.7

Q ss_pred             ccchHHHhccccccCCCCCcccHHHHHHHHHHh
Q 013328          300 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  332 (445)
Q Consensus       300 ~~~~~~~~F~~~D~~~~~G~i~~~el~~~l~~~  332 (445)
                      ....+.++++..|.|++ |+|+.+||..+|.-+
T Consensus        54 ~~~~L~~Iw~l~D~d~d-G~l~~~EF~~am~Li   85 (110)
T d1iq3a_          54 SIPELSYIWELSDADCD-GALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSCCHHHHHHHHCSSSC-SEEEHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhccCCC-CeECHHHHHHHHHHH
Confidence            34678999999999999 999999999887654

>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Protein cgi-38
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.45  E-value=2.4  Score=32.14  Aligned_cols=67  Identities=7%  Similarity=0.235  Sum_probs=49.7

Q ss_pred             chHHHhcccccc----CCCCC-cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 013328          302 LTETDAFAFLKA----DNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  370 (445)
Q Consensus       302 ~~~~~~F~~~D~----~~~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~  370 (445)
                      ..|+++|..|-.    ..+ | .|+...+..+|+..++.+. ..++..+++-+|..+-.-+...|+|++|++.|
T Consensus         8 ~~L~~~F~~F~~fG~~k~~-~~~m~~~~f~K~~kd~~lid~-K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL   79 (138)
T d1wlma1           8 AGLEESFRKFAIHGDPKAS-GQEMNGKNWAKLCKDCKVADG-KAVTGTDVDIVFSKVKAKSARVINYEEFKKAL   79 (138)
T ss_dssp             CSHHHHHHHHHTSSCSSCC-SSEEEHHHHHHHHHHTSCCCS-SSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCC-cccCCHHHHHHHHHHcCCCcC-CccchhhHHHHHHHhhcCCCcccCHHHHHHHH
Confidence            456666665542    223 3 4999999999999886411 23888999999999877677899999998665