Citrus Sinensis ID: 013337

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-----
MWVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYLQ
ccEEEEEcccccccEEEEEEEEEEEcccccccccccccccEEEcccHHHHHHHHHHHHHccccHHcccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccEEEEEccccHHHHHHHccccEEEEcccccEEccccccHHHHcccccccccccHHHHccEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
cEEEEEEEccccccEEccccHHEEEEEcccccccccccccEEEEccHHHHHHHHHHHHHHccccHccccccEEEEcEEEEEcccccccccEEEEccHccccHHHHHHHHHHHHHHHHcEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHccHccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEccccccccHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccEEcHHHHHcccccccccccEEEEEcccHHHHHHHHccccEEEccccEEEEEcccccHHHHcccccccccccHHHHHHEHEHEEEEcHcccccHHHHHHHHHHHHHHHHHHccccHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
MWVLGVTERRVMGAFWVLNLVLFLVQVVGIkgahgigehgvriwpmplsvshghkslyvgkdfkimsqgskykdasgilkdgfsrfsfrgllidtsrhyqplpiiKNVIDSMAYAKLNVLHWHivdtqsfpleipsypklwdgaystserytMADAAEIVSYAQKRGINVlaeldvpghalswgkgypslwpskdcqepldvsneFTFKVIDGILSDFSKVFKYKFVHlggdevntscwtltphVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEEtfnnfgnklspkTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLdttweqfymnepltnitkseQQKLVIggevcmwgetvdasdiqqTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNqrgiaaaplaadtpltqpgrsaplepgscylq
MWVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTqsfpleipsypKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLggdevntscWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPltqpgrsaplepgscylq
MWVLGVTERRVMGAFWvlnlvlflvqvvGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLgggvaqrvvaagLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIaaaplaadtpltQPGRSAPLEPGSCYLQ
*WVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPL***********************
*WV*G**ERRVM*AFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYL*
MWVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYLQ
MWVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEP**C***
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWVLGVTERRVMGAFWVLNLVLFLVQVVGIKGAHGIGEHGVRIWPMPLSVSHGHKSLYVGKDFKIMSQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGAYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query445 2.2.26 [Sep-21-2011]
Q8L7S6535 Beta-hexosaminidase 3 OS= yes no 0.797 0.663 0.761 1e-170
A7WM73541 Beta-hexosaminidase 1 OS= no no 0.8 0.658 0.597 1e-130
P06865529 Beta-hexosaminidase subun yes no 0.784 0.659 0.392 3e-67
Q54K56564 Beta-hexosaminidase subun yes no 0.853 0.673 0.353 3e-67
Q5RC84529 Beta-hexosaminidase subun yes no 0.784 0.659 0.392 5e-67
P07686556 Beta-hexosaminidase subun no no 0.750 0.600 0.404 1e-66
Q0V8R6529 Beta-hexosaminidase subun yes no 0.784 0.659 0.384 2e-66
Q6AXR4537 Beta-hexosaminidase subun yes no 0.777 0.644 0.384 2e-64
P13723532 Beta-hexosaminidase subun no no 0.750 0.627 0.347 5e-64
Q641X3528 Beta-hexosaminidase subun no no 0.755 0.636 0.382 1e-63
>sp|Q8L7S6|HEXO3_ARATH Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 Back     alignment and function desciption
 Score =  600 bits (1546), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 275/361 (76%), Positives = 314/361 (86%), Gaps = 6/361 (1%)

Query: 85  RFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGA 144
           RFS+RGLLIDTSRHY PLP+IKNVIDSM YAKLNVLHWHIVDTQSFPLEIPSYPKLW+GA
Sbjct: 181 RFSYRGLLIDTSRHYLPLPVIKNVIDSMTYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGA 240

Query: 145 YSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSN 204
           YS+S+RYT  DAAEIV+YA++RGI+VLAE+DVPGHALSWGKGYP+LWPSK+CQEPLDVS+
Sbjct: 241 YSSSQRYTFEDAAEIVNYARRRGIHVLAEIDVPGHALSWGKGYPALWPSKNCQEPLDVSS 300

Query: 205 EFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFV 264
           +FTFKVIDGILSDFSK+FK+KFVHLGGDEVNT+CW+ TP +++WLK+H M+E +AYQYFV
Sbjct: 301 DFTFKVIDGILSDFSKIFKFKFVHLGGDEVNTTCWSATPRIAQWLKKHRMSEKEAYQYFV 360

Query: 265 LQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDK 324
           L+AQKIAL HGYEI+NWEETF NFG+KL+ KTVVHNWL  G+ + V A+GLRCIVSNQ+ 
Sbjct: 361 LRAQKIALSHGYEIINWEETFINFGSKLNRKTVVHNWLNTGLVENVTASGLRCIVSNQEF 420

Query: 325 WYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAA 384
           WYLDH+D  W+ FY NEP  NIT  +QQ LV+GGEVCMWGE +DASDI+QTIWPRAAAAA
Sbjct: 421 WYLDHIDAPWQGFYANEPFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAA 480

Query: 385 ERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYL 444
           ERLWTPY KLAK    VT RLAHFRCLLNQRG+AAAPL         GR  P EPGSC  
Sbjct: 481 ERLWTPYAKLAKNPNNVTTRLAHFRCLLNQRGVAAAPLVGG------GRVVPFEPGSCLA 534

Query: 445 Q 445
           Q
Sbjct: 535 Q 535
Has a broad substrate specificity. Can use synthetic substrates such as pyridylaminated chitotriose, p-nitrophenyl-beta-N-acetylglucosaminide, p-nitrophenyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (pNP-GlcNAc), p-nitrophenyl-2-acetamido-2-deoxy-beta-D-galactopyranoside (pNP-GalNAc), 4-methylumbelliferyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc), and 4-methylumbelliferyl-6-sulfo-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc-6SO(4)) as substrates. Removes terminal GlcNAc residues from alpha1,3- and alpha1,6-mannosyl branches of biantennary N-glycans without any strict branch preference. Required for the presence of paucimannosidic N-glycans in glycoproteins of roots and leaves.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 2
>sp|A7WM73|HEXO1_ARATH Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 Back     alignment and function description
>sp|P06865|HEXA_HUMAN Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 Back     alignment and function description
>sp|Q54K56|HEXB2_DICDI Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 Back     alignment and function description
>sp|Q5RC84|HEXA_PONAB Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 Back     alignment and function description
>sp|P07686|HEXB_HUMAN Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 Back     alignment and function description
>sp|Q0V8R6|HEXA_BOVIN Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 Back     alignment and function description
>sp|Q6AXR4|HEXB_RAT Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1 Back     alignment and function description
>sp|P13723|HEXA1_DICDI Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 Back     alignment and function description
>sp|Q641X3|HEXA_RAT Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
255547424527 beta-hexosaminidase, putative [Ricinus c 0.797 0.673 0.853 0.0
224098804458 predicted protein [Populus trichocarpa] 0.797 0.775 0.837 0.0
357129178529 PREDICTED: beta-hexosaminidase subunit B 0.802 0.674 0.779 1e-172
413945369529 hypothetical protein ZEAMMB73_303571 [Ze 0.797 0.671 0.781 1e-171
449470265539 PREDICTED: beta-hexosaminidase 3-like [C 0.797 0.658 0.778 1e-171
326487622526 predicted protein [Hordeum vulgare subsp 0.797 0.674 0.772 1e-170
297838137535 glycosyl hydrolase family 20 protein [Ar 0.797 0.663 0.764 1e-169
449524623 585 PREDICTED: beta-hexosaminidase 3-like, p 0.797 0.606 0.772 1e-169
30697215535 beta-hexosaminidase 3 [Arabidopsis thali 0.797 0.663 0.761 1e-169
357149257523 PREDICTED: beta-hexosaminidase subunit B 0.797 0.678 0.750 1e-166
>gi|255547424|ref|XP_002514769.1| beta-hexosaminidase, putative [Ricinus communis] gi|223545820|gb|EEF47323.1| beta-hexosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/361 (85%), Positives = 339/361 (93%), Gaps = 6/361 (1%)

Query: 85  RFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGA 144
           RFS+RGLLIDTSRHYQPLP+IK VIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW+GA
Sbjct: 173 RFSYRGLLIDTSRHYQPLPMIKKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGA 232

Query: 145 YSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSN 204
           YS SERYT ADAAEIVSYA+++GI++LAE+DVPGHALSWGKGYPSLWPSKDCQ+PLDVSN
Sbjct: 233 YSVSERYTFADAAEIVSYAERQGIHILAEIDVPGHALSWGKGYPSLWPSKDCQQPLDVSN 292

Query: 205 EFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFV 264
           EFTFKVIDGILSDFSK+FK+KFVHLGGDEV+TSCWT TPH+  WLK+H+ NES+AYQYFV
Sbjct: 293 EFTFKVIDGILSDFSKIFKFKFVHLGGDEVDTSCWTSTPHIMNWLKKHNRNESEAYQYFV 352

Query: 265 LQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAAGLRCIVSNQDK 324
           L+AQ+IAL HGYEIVNWEETFN+FGNKLS KTVVHNWLGGGVAQ+VVA+GLRCIVSNQD+
Sbjct: 353 LRAQQIALSHGYEIVNWEETFNSFGNKLSRKTVVHNWLGGGVAQQVVASGLRCIVSNQDQ 412

Query: 325 WYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAA 384
           WYLDHLDTTW++FYMNEPLTNIT  EQQKLVIGGEVCMWGETVDAS+I+QTIWPRAAAAA
Sbjct: 413 WYLDHLDTTWQEFYMNEPLTNITNIEQQKLVIGGEVCMWGETVDASNIEQTIWPRAAAAA 472

Query: 385 ERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCYL 444
           ERLWT YDKLAK  ++VTGRLAHFRCLLNQRG+AAAP+A       PGR APLEPGSCYL
Sbjct: 473 ERLWTSYDKLAKNPREVTGRLAHFRCLLNQRGVAAAPVAG------PGRGAPLEPGSCYL 526

Query: 445 Q 445
           Q
Sbjct: 527 Q 527

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224098804|ref|XP_002311272.1| predicted protein [Populus trichocarpa] gi|222851092|gb|EEE88639.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357129178|ref|XP_003566243.1| PREDICTED: beta-hexosaminidase subunit B2-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|413945369|gb|AFW78018.1| hypothetical protein ZEAMMB73_303571 [Zea mays] Back     alignment and taxonomy information
>gi|449470265|ref|XP_004152838.1| PREDICTED: beta-hexosaminidase 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|326487622|dbj|BAK05483.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326533640|dbj|BAK05351.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|297838137|ref|XP_002886950.1| glycosyl hydrolase family 20 protein [Arabidopsis lyrata subsp. lyrata] gi|297332791|gb|EFH63209.1| glycosyl hydrolase family 20 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449524623|ref|XP_004169321.1| PREDICTED: beta-hexosaminidase 3-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|30697215|ref|NP_176737.2| beta-hexosaminidase 3 [Arabidopsis thaliana] gi|75154220|sp|Q8L7S6.1|HEXO3_ARATH RecName: Full=Beta-hexosaminidase 3; AltName: Full=Beta-GlcNAcase 3; AltName: Full=Beta-N-acetylhexosaminidase 3; AltName: Full=Beta-hexosaminidase 1; Short=AtHEX1; AltName: Full=N-acetyl-beta-glucosaminidase 3; Flags: Precursor gi|22135811|gb|AAM91092.1| At1g65600/F5I14_13 [Arabidopsis thaliana] gi|23463073|gb|AAN33206.1| At1g65600/F5I14_13 [Arabidopsis thaliana] gi|332196278|gb|AEE34399.1| beta-hexosaminidase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357149257|ref|XP_003575050.1| PREDICTED: beta-hexosaminidase subunit B2-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
TAIR|locus:2034147535 HEXO3 "beta-hexosaminidase 3" 0.797 0.663 0.736 6.4e-166
TAIR|locus:2100706541 HEXO1 "beta-hexosaminidase 1" 0.8 0.658 0.578 8.5e-119
UNIPROTKB|E2RIM8529 HEXA "Uncharacterized protein" 0.746 0.627 0.382 6.8e-65
UNIPROTKB|P07686556 HEXB "Beta-hexosaminidase subu 0.739 0.591 0.389 1.3e-63
UNIPROTKB|H7BWW2537 HEXB "Uncharacterized protein" 0.739 0.612 0.391 3.3e-63
RGD|1307607537 Hexb "hexosaminidase B" [Rattu 0.732 0.607 0.397 5.4e-63
UNIPROTKB|Q6AXR4537 Hexb "Beta-hexosaminidase subu 0.732 0.607 0.397 5.4e-63
MGI|MGI:96074536 Hexb "hexosaminidase B" [Mus m 0.732 0.608 0.391 5.4e-63
UNIPROTKB|H3BP20540 HEXA "Beta-hexosaminidase subu 0.746 0.614 0.393 1.3e-61
UNIPROTKB|P06865529 HEXA "Beta-hexosaminidase subu 0.746 0.627 0.393 1.3e-61
TAIR|locus:2034147 HEXO3 "beta-hexosaminidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1476 (524.6 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
 Identities = 266/361 (73%), Positives = 302/361 (83%)

Query:    85 RFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWDGA 144
             RFS+RGLLIDTSRHY PLP+IKNVIDSM YAKLNVLHWHIVDTQSFPLEIPSYPKLW+GA
Sbjct:   181 RFSYRGLLIDTSRHYLPLPVIKNVIDSMTYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGA 240

Query:   145 YSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSKDCQEPLDVSN 204
             YS+S+RYT  DAAEIV+YA++RGI+VLAE+DVPGHALSWGKGYP+LWPSK+CQEPLDVS+
Sbjct:   241 YSSSQRYTFEDAAEIVNYARRRGIHVLAEIDVPGHALSWGKGYPALWPSKNCQEPLDVSS 300

Query:   205 EFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNESQAYQYFV 264
             +FTFKVIDGILSDFSK+FK+KFVHLGGDEVNT+CW+ TP +++WLK+H M+E +AYQYFV
Sbjct:   301 DFTFKVIDGILSDFSKIFKFKFVHLGGDEVNTTCWSATPRIAQWLKKHRMSEKEAYQYFV 360

Query:   265 LQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLXXXXXXXXXXXXLRCIVSNQDK 324
             L+AQKIAL HGYEI+NWEETF NFG+KL+ KTVVHNWL            LRCIVSNQ+ 
Sbjct:   361 LRAQKIALSHGYEIINWEETFINFGSKLNRKTVVHNWLNTGLVENVTASGLRCIVSNQEF 420

Query:   325 WYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAA 384
             WYLDH+D  W+ FY NEP  NIT  +QQ LV+GGEVCMWGE +DASDI+QTIWPRAAAAA
Sbjct:   421 WYLDHIDAPWQGFYANEPFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAA 480

Query:   385 ERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIXXXXXXXXXXXXQPGRSAPLEPGSCYL 444
             ERLWTPY KLAK    VT RLAHFRCLLNQRG+              GR  P EPGSC  
Sbjct:   481 ERLWTPYAKLAKNPNNVTTRLAHFRCLLNQRGVAAAPLVGG------GRVVPFEPGSCLA 534

Query:   445 Q 445
             Q
Sbjct:   535 Q 535
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004563 "beta-N-acetylhexosaminidase activity" evidence=IEA;ISS;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0015929 "hexosaminidase activity" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2100706 HEXO1 "beta-hexosaminidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2RIM8 HEXA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P07686 HEXB "Beta-hexosaminidase subunit beta" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H7BWW2 HEXB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1307607 Hexb "hexosaminidase B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6AXR4 Hexb "Beta-hexosaminidase subunit beta" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:96074 Hexb "hexosaminidase B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|H3BP20 HEXA "Beta-hexosaminidase subunit alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P06865 HEXA "Beta-hexosaminidase subunit alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L7S6HEXO3_ARATH3, ., 2, ., 1, ., 5, 20.76170.79770.6635yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.691
3rd Layer3.2.1.520.737

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_VIII1629
hypothetical protein (458 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_IV000085
hypothetical protein (379 aa)
  •  •  0.916
eugene3.00101110
alpha-galactosidase (EC-3.2.1.22) (386 aa)
  •  •  0.915
gw1.X.3030.1
alpha-galactosidase (EC-2.4.1.67) (369 aa)
  •  •  0.915
fgenesh4_pg.C_scaffold_164000005
alpha-galactosidase (EC-3.2.1.22) (367 aa)
  •  •  0.915
gw1.XIX.1583.1
alpha-galactosidase (380 aa)
  •  •  0.915
gw1.XVI.3598.1
hypothetical protein (279 aa)
     •  0.899
gw1.XI.1982.1
hypothetical protein (298 aa)
     •  0.899
gw1.IV.2358.1
hypothetical protein (298 aa)
     •  0.899
gw1.44.267.1
hypothetical protein (643 aa)
     •  0.899
gw1.142.209.1
hypothetical protein (252 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
cd06562348 cd06562, GH20_HexA_HexB-like, Beta-N-acetylhexosam 1e-157
pfam00728335 pfam00728, Glyco_hydro_20, Glycosyl hydrolase fami 1e-109
cd06570311 cd06570, GH20_chitobiase-like_1, A functionally un 3e-76
cd06563357 cd06563, GH20_chitobiase-like, The chitobiase of S 3e-72
cd02742303 cd02742, GH20_hexosaminidase, Beta-N-acetylhexosam 1e-63
cd06568329 cd06568, GH20_SpHex_like, A subgroup of the Glycos 5e-53
COG3525732 COG3525, Chb, N-acetyl-beta-hexosaminidase [Carboh 2e-39
cd06569445 cd06569, GH20_Sm-chitobiase-like, The chitobiase o 3e-31
cd06564326 cd06564, GH20_DspB_LnbB-like, Glycosyl hydrolase f 4e-27
cd06565301 cd06565, GH20_GcnA-like, Glycosyl hydrolase family 8e-09
>gnl|CDD|119332 cd06562, GH20_HexA_HexB-like, Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information 
 Score =  447 bits (1152), Expect = e-157
 Identities = 156/350 (44%), Positives = 202/350 (57%), Gaps = 21/350 (6%)

Query: 86  FSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-DGA 144
           F  RGLL+DTSRH+  +  IK  ID+MAY KLNVLHWHI D+QSFPLE PSYP+L   GA
Sbjct: 1   FPHRGLLLDTSRHFLSVDSIKRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGA 60

Query: 145 YSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWP------SKDCQE 198
           YS SE YT  D  EIV YA+ RGI V+ E+D PGH  SWG+GYP L         K C E
Sbjct: 61  YSPSEVYTPEDVKEIVEYARLRGIRVIPEIDTPGHTGSWGQGYPELLTGCYAVWRKYCPE 120

Query: 199 P----LDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSM 254
           P    L+ +N  T+  +  +  + S++F  K+ HLGGDEVN +CW   P + K++K+++ 
Sbjct: 121 PPCGQLNPTNPKTYDFLKTLFKEVSELFPDKYFHLGGDEVNFNCWNSNPEIQKFMKKNNG 180

Query: 255 -NESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGVAQRVVAA 313
            + S    YF+ +A  I    G   + WEE F+N    L   T+V  W G    + V+AA
Sbjct: 181 TDYSDLESYFIQRALDIVRSLGKTPIVWEEVFDNGVYLLPKDTIVQVWGGSDELKNVLAA 240

Query: 314 GLRCIVSNQDKWYLDHLDT-------TWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGET 366
           G + I+S+ D WYLD            W   Y N P       EQ+KLV+GGE CMWGE 
Sbjct: 241 GYKVILSSYDFWYLDCGFGGWVGPGNDWCDPYKNWPRIYSGTPEQKKLVLGGEACMWGEQ 300

Query: 367 VDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRG 416
           VD +++ Q +WPRA+A AERLW+              RL  FRC L +RG
Sbjct: 301 VDDTNLDQRLWPRASALAERLWSGPSDTNLT--DAEPRLVEFRCRLVRRG 348

The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in Tay-Sachs, mutations in the beta-subunit cause in a deficiency in both HexA and HexB enzymes and result in Sandhoff disease. In both disorders GM(2) gangliosides accumulate in lysosomes. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Length = 348
>gnl|CDD|216086 pfam00728, Glyco_hydro_20, Glycosyl hydrolase family 20, catalytic domain Back     alignment and domain information
>gnl|CDD|119338 cd06570, GH20_chitobiase-like_1, A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>gnl|CDD|119333 cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>gnl|CDD|119331 cd02742, GH20_hexosaminidase, Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>gnl|CDD|119336 cd06568, GH20_SpHex_like, A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>gnl|CDD|226056 COG3525, Chb, N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119337 cd06569, GH20_Sm-chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>gnl|CDD|119334 cd06564, GH20_DspB_LnbB-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>gnl|CDD|119335 cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 445
KOG2499542 consensus Beta-N-acetylhexosaminidase [Carbohydrat 100.0
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 100.0
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 100.0
cd06570311 GH20_chitobiase-like_1 A functionally uncharacteri 100.0
cd06569445 GH20_Sm-chitobiase-like The chitobiase of Serratia 100.0
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 100.0
PF00728351 Glyco_hydro_20: Glycosyl hydrolase family 20, cata 100.0
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 100.0
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 100.0
COG3525732 Chb N-acetyl-beta-hexosaminidase [Carbohydrate tra 100.0
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 100.0
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.49
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.82
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 95.08
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 94.95
COG1649418 Uncharacterized protein conserved in bacteria [Fun 94.54
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 94.18
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 92.46
PF14845128 Glycohydro_20b2: beta-acetyl hexosaminidase like; 89.18
PRK12313 633 glycogen branching enzyme; Provisional 86.9
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 86.88
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 86.03
smart00642166 Aamy Alpha-amylase domain. 85.66
PRK12568 730 glycogen branching enzyme; Provisional 84.61
PLN02447 758 1,4-alpha-glucan-branching enzyme 82.35
PRK05402 726 glycogen branching enzyme; Provisional 82.25
TIGR02403 543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 81.33
TIGR02100 688 glgX_debranch glycogen debranching enzyme GlgX. Th 81.23
PLN02960 897 alpha-amylase 80.71
PRK14705 1224 glycogen branching enzyme; Provisional 80.59
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 80.49
PRK14706 639 glycogen branching enzyme; Provisional 80.02
>KOG2499 consensus Beta-N-acetylhexosaminidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.7e-95  Score=734.29  Aligned_cols=352  Identities=44%  Similarity=0.837  Sum_probs=324.3

Q ss_pred             ccccCCccceeeeecCCCCCChHHHHHHHHHHHHcCCcEEEEEEecCCccceeeCCCCCCC-ccCCCCCCCCCHHHHHHH
Q 013337           81 DGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-DGAYSTSERYTMADAAEI  159 (445)
Q Consensus        81 ~a~~rf~~RGlmLD~aR~f~p~~~lk~~Id~Ma~~KlN~Lh~HltD~q~frle~~~~P~L~-~Gay~~~~~YT~~ei~ei  159 (445)
                      +|.|||+|||+|||+||||+|++.||+.||.||+.||||||||++|+||||+|++++|+|. +|||+.++.||.+|+++|
T Consensus       176 ~D~PrF~hRGlLlDTSRhylpv~~IkrtLeaMa~nKLNVlHWHivDs~SFPle~~~~PeL~~kGaYs~~~vYT~eDv~ev  255 (542)
T KOG2499|consen  176 QDKPRFGHRGLLLDTSRHYLPVKVIKRTLEAMAANKLNVLHWHIVDSQSFPLESPTFPELHRKGAYSPRHVYTREDVSEV  255 (542)
T ss_pred             eccCCCcccceEEecccceecHHHHHHHHHHHHhhhhceeEEEeecCCCCccccCCchhhhhcCCCCcceeecHHHHHHH
Confidence            3557999999999999999999999999999999999999999999999999999999995 999999999999999999


Q ss_pred             HHHHHHcCCEEEeecCCchhhHHHHhhCCCC-CCC--CCC----CCCCCCCChHHHHHHHHHHHHHhhhcCCceEEecCC
Q 013337          160 VSYAQKRGINVLAELDVPGHALSWGKGYPSL-WPS--KDC----QEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGD  232 (445)
Q Consensus       160 v~yA~~rGI~VIPEID~PGH~~a~~~~ypel-~~~--~~~----~~~Ld~~~~~t~~fl~~ll~E~~~lFp~~~~HiGgD  232 (445)
                      |+||+.|||+|+||||+|||+++|+.+||+| +|.  ..|    ..+|||+++.||+|+++++.|+.++||+.+||+|||
T Consensus       256 V~yarlRGIRVlpEfD~PgHt~sWg~g~~~fl~p~~~~~~~~~~~gplnP~~n~tydvls~i~~dv~evFp~~~~HlGGD  335 (542)
T KOG2499|consen  256 VEYARLRGIRVLPEFDTPGHTGSWGPGYPDFLTPCWSSFEVQPPFGPLNPTNNHTYDVLSEIFEDVSEVFPDEFFHLGGD  335 (542)
T ss_pred             HHHHHhccceeeecccCCcccccccCCCCcccCCcccccccCCCCcCCCCCchhHHHHHHHHHHHHHHhCcHHHeecCCc
Confidence            9999999999999999999999999999996 332  222    246999999999999999999999999999999999


Q ss_pred             ccccccccCCHHHHHHHHHCCCChh--HHHHHHHHHHHHHHHHcCCeEEEecccccccCCCCCCCeEEEecCCCc---hH
Q 013337          233 EVNTSCWTLTPHVSKWLKEHSMNES--QAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGG---VA  307 (445)
Q Consensus       233 Ev~~~~w~~~p~~~~~~~~~g~~~~--~l~~~F~~~l~~~v~~~G~~~~~W~d~~~~~~~~l~~~~ii~~W~~~~---~~  307 (445)
                      ||+..||+++|++|+||+++|+...  +++.+|++++.+++.+.++++++|+|.+.+. ..+++++|||.|+...   ..
T Consensus       336 EV~~~CW~s~~~Iq~fM~~kGfg~~~~~~~~~~~~~~~~i~~s~~~~~I~Wqevf~n~-~~i~p~tiiq~W~~~~~~~~~  414 (542)
T KOG2499|consen  336 EVSTPCWKSNPEIQDFMRKKGFGLDTKSLERLYIQFLLDILNSWNKTVIVWQEVFDNK-RKIDPRTIIQIWKIGTWYPKE  414 (542)
T ss_pred             eeecccccCChHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhcCceEEEeehhcccc-ccCCCCceeeeeccCCccHHH
Confidence            9999999999999999999998765  6899999999999999999999999999864 4569999999999765   56


Q ss_pred             HHHHHcCCcEEEeCCCccccccC--CcchhccccCCcCCCCCChhhhcceeeeeeeecCCCCCCchhhHhhHHHHHHHHH
Q 013337          308 QRVVAAGLRCIVSNQDKWYLDHL--DTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAE  385 (445)
Q Consensus       308 ~~~~~~G~~vI~s~~~~~Yld~~--~~~w~~~Y~~~p~~~~~~~~~~~~ilG~e~~lW~E~~~~~~l~~~i~PR~~a~AE  385 (445)
                      .+.+.+||++|+|++.+||||++  +.+|.++|+.+|..+..+.+++++|+|||+|||||++|..+++.++|||+.|+||
T Consensus       415 ~k~v~~~~~~ivs~s~~wYLd~~~~g~dw~~~Y~~~p~~~~g~~~~k~lVlGGE~cmWgE~vD~t~L~~RlWPRAsA~AE  494 (542)
T KOG2499|consen  415 LKIVTKGYRFIVSNSAAWYLDHIGYGSDWRKVYNTEPLSGMGTPEQKKLVLGGEVCMWGEYVDNTNLESRLWPRASAAAE  494 (542)
T ss_pred             HHHHhccCceEEEeccceEeeccccCCChhheeeccccccCCCHHHhhheecceeeeehhhccccccccccccchhHHHH
Confidence            78899999999999999999964  5799999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 013337          386 RLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPLAADTPLTQPGRSAPLEPGSCY  443 (445)
Q Consensus       386 ~~Ws~~~~~~~~~~~~~~Rl~~~~~~l~~~gi~~~p~~~~~~~~~~~~~~~~~p~~c~  443 (445)
                      |+||.+..  ++..++.+||..|||||.+|||.|.|+        .+-+|+..|+.|.
T Consensus       495 RLWS~~~~--~~~~~A~~Rl~~~RcrLv~RGi~A~p~--------~p~~C~~~~~~c~  542 (542)
T KOG2499|consen  495 RLWSNKKV--SRLLDAYPRLHLFRCRLVARGIGAQPV--------QPGWCLQEEGECP  542 (542)
T ss_pred             Hhhccccc--chHHHHHHHHHHHHHHHHhcCCCcCCC--------CCcccccCCCCCC
Confidence            99995444  589999999999999999999999999        3455666777773

>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>COG3525 Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14845 Glycohydro_20b2: beta-acetyl hexosaminidase like; PDB: 1O7A_B 2GJX_C 2GK1_D 1NOW_B 1NOU_B 3LMY_B 1NP0_A 3S6T_A 3OZO_A 3NSN_A Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
2gk1_A507 X-Ray Crystal Structure Of Ngt-Bound Hexa Length = 1e-64
1o7a_A515 Human Beta-Hexosaminidase B Length = 515 2e-61
3lmy_A556 The Crystal Structure Of Beta-Hexosaminidase B In C 2e-61
2gk1_B503 X-Ray Crystal Structure Of Ngt-Bound Hexa Length = 3e-61
1nou_A507 Native Human Lysosomal Beta-Hexosaminidase Isoform 3e-61
3s6t_A575 Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosam 2e-36
3nsm_A572 Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosam 3e-36
3vtr_A572 Crystal Structure Of Insect Beta-n-acetyl-d-hexosam 9e-35
3rcn_A543 Crystal Structure Of Beta-N-Acetylhexosaminidase Fr 3e-24
3gh4_A525 Crystal Structure Of Beta-Hexosaminidase From Paeni 6e-21
1hp4_A512 Crystal Structure Of Streptomyces Plicatus Beta-N-A 9e-18
1m04_A512 Mutant Streptomyces Plicatus Beta-Hexosaminidase (D 3e-17
1m03_A512 Mutant Streptomyces Plicatus Beta-Hexosaminidase (D 7e-17
1qbb_A 858 Bacterial Chitobiase Complexed With Chitobiose (Din 2e-11
1c7t_A 858 Beta-N-Acetylhexosaminidase Mutant E540d Complexed 4e-11
1c7s_A 858 Beta-N-Acetylhexosaminidase Mutant D539a Complexed 5e-11
1yht_A367 Crystal Structure Analysis Of Dispersin B Length = 5e-10
>pdb|2GK1|A Chain A, X-Ray Crystal Structure Of Ngt-Bound Hexa Length = 507 Back     alignment and structure 
Iteration: 1

 Score =  243 bits (621), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 203/370 (54%), Gaps = 26/370 (7%)
Query: 67  SQGSKYKDASGILKDGFSRFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVD 126
           ++G+ + + + I  + F RF  RGLL+DTSRHY PL  I + +D MAY KLNV HWH+VD
Sbjct: 128 AEGTFFINKTEI--EDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVD 185
Query: 127 TQSFPLEIPSYPKLW-DGAYS-TSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWG 184
             SFP E  ++P+L   G+Y+  +  YT  D  E++ YA+ RGI VLAE D PGH LSWG
Sbjct: 186 DPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWG 245
Query: 185 KGYPSLW-PSKDCQE------PLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTS 237
            G P L  P     E      P++ S   T++ +     + S VF   ++HLGGDEV+ +
Sbjct: 246 PGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFT 305
Query: 238 CWTLTPHVSKWLKEHSMNES--QAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPK 295
           CW   P +  ++++    E   Q   +++     I   +G   V W+E F+N   K+ P 
Sbjct: 306 CWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDN-KVKIQPD 364
Query: 296 TVVHNWLXXXXXXXXXXXXL------RCIVSNQDKWYLDHLD--TTWEQFYMNEPLTNIT 347
           T++  W             L      R ++S    WYL+ +     W+ FY+ EPL    
Sbjct: 365 TIIQVWREDIPVNYMKELELVTKAGFRALLSA--PWYLNRISYGPDWKDFYVVEPLAFEG 422
Query: 348 KSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAH 407
             EQ+ LVIGGE CMWGE VD +++   +WPRA A AERLW+  +KL  +      RL+H
Sbjct: 423 TPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWS--NKLTSDLTFAYERLSH 480
Query: 408 FRCLLNQRGI 417
           FRC L +RG+
Sbjct: 481 FRCELLRRGV 490
>pdb|1O7A|A Chain A, Human Beta-Hexosaminidase B Length = 515 Back     alignment and structure
>pdb|3LMY|A Chain A, The Crystal Structure Of Beta-Hexosaminidase B In Complex With Pyrimethamine Length = 556 Back     alignment and structure
>pdb|2GK1|B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa Length = 503 Back     alignment and structure
>pdb|1NOU|A Chain A, Native Human Lysosomal Beta-Hexosaminidase Isoform B Length = 507 Back     alignment and structure
>pdb|3S6T|A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 V327g Complexed With Pugnac Length = 575 Back     alignment and structure
>pdb|3NSM|A Chain A, Crystal Structure Of Insect Beta-N-Acetyl-D-Hexosaminidase Ofhex1 From Ostrinia Furnacalis Length = 572 Back     alignment and structure
>pdb|3VTR|A Chain A, Crystal Structure Of Insect Beta-n-acetyl-d-hexosaminidase Ofhex1 E328a Complexed With Tmg-chitotriomycin Length = 572 Back     alignment and structure
>pdb|3RCN|A Chain A, Crystal Structure Of Beta-N-Acetylhexosaminidase From Arthrobacter Aurescens Length = 543 Back     alignment and structure
>pdb|3GH4|A Chain A, Crystal Structure Of Beta-Hexosaminidase From Paenibacillus Sp. Ts12 Length = 525 Back     alignment and structure
>pdb|1HP4|A Chain A, Crystal Structure Of Streptomyces Plicatus Beta-N-Acetylhexosaminidase Length = 512 Back     alignment and structure
>pdb|1M04|A Chain A, Mutant Streptomyces Plicatus Beta-Hexosaminidase (D313n) In Complex With Product (Glcnac) Length = 512 Back     alignment and structure
>pdb|1M03|A Chain A, Mutant Streptomyces Plicatus Beta-Hexosaminidase (D313a) In Complex With Product (Glcnac) Length = 512 Back     alignment and structure
>pdb|1QBB|A Chain A, Bacterial Chitobiase Complexed With Chitobiose (Dinag) Length = 858 Back     alignment and structure
>pdb|1C7T|A Chain A, Beta-N-Acetylhexosaminidase Mutant E540d Complexed With Di- N Acetyl-D-Glucosamine (Chitobiase) Length = 858 Back     alignment and structure
>pdb|1C7S|A Chain A, Beta-N-Acetylhexosaminidase Mutant D539a Complexed With Di- N-Acetyl-Beta-D-Glucosamine (Chitobiase) Length = 858 Back     alignment and structure
>pdb|1YHT|A Chain A, Crystal Structure Analysis Of Dispersin B Length = 367 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
1now_A507 Beta-hexosaminidase beta chain; (beta/alpha)8-barr 1e-147
2gjx_A507 Beta-hexosaminidase alpha chain; beta-hexosaminida 1e-143
3ozo_A572 N-acetylglucosaminidase; beta-N-acetyl-D-hexosamin 1e-142
3rcn_A543 Beta-N-acetylhexosaminidase; structural genomics, 1e-125
3gh5_A525 HEX1, beta-hexosaminidase; beta-N-acetylhexosamini 1e-114
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 1e-106
1yht_A367 DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact 4e-94
2yl6_A434 Beta-N-acetylhexosaminidase; peptidoglycan-anchor, 1e-88
2yl5_A442 Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Str 1e-76
1c7s_A858 Beta-N-acetylhexosaminidase; glycosyl hydrolase, c 9e-62
2epl_X 627 N-acetyl-beta-D-glucosaminidase; glycoside hydrola 2e-57
2v5c_A 594 O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol 9e-07
2v5d_A 737 O-GLCNACASE NAGJ; family 32 carbohydrate binding m 1e-05
2cho_A 716 Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B* Length = 507 Back     alignment and structure
 Score =  428 bits (1103), Expect = e-147
 Identities = 137/353 (38%), Positives = 196/353 (55%), Gaps = 20/353 (5%)

Query: 85  RFSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWD-G 143
           RFS RG+LIDTSRHY P+ II   +D+MA+ K NVLHWHIVD QSFP +  ++P+L + G
Sbjct: 150 RFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKG 209

Query: 144 AYSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSL-------WPSKDC 196
           +YS S  YT  D   ++ YA+ RGI VL E D PGH LSWGKG   L           D 
Sbjct: 210 SYSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSRQNKLDS 269

Query: 197 QEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSM-- 254
             P++ +   T+  +     + S+VF  +F+HLGGDEV   CW   P +  ++++     
Sbjct: 270 FGPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGT 329

Query: 255 NESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGGGV---AQRVV 311
           +  +   +++ +   I        + W+E F++   KL+P T+V  W          RV 
Sbjct: 330 DFKKLESFYIQKVLDIIATINKGSIVWQEVFDD-KAKLAPGTIVEVWKDSAYPEELSRVT 388

Query: 312 AAGLRCIVSNQDKWYLDHLD--TTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDA 369
           A+G   I+S    WYLD +     W ++Y  EPL      +Q++L IGGE C+WGE VDA
Sbjct: 389 ASGFPVILSAP--WYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIGGEACLWGEYVDA 446

Query: 370 SDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPL 422
           +++   +WPRA+A  ERLW+  D   ++      RL   RC + +RGIAA PL
Sbjct: 447 TNLTPRLWPRASAVGERLWSSKDV--RDMDDAYDRLTRHRCRMVERGIAAQPL 497
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A* Length = 507 Back     alignment and structure
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* Length = 572 Back     alignment and structure
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens} Length = 543 Back     alignment and structure
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* Length = 525 Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Length = 512 Back     alignment and structure
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 Length = 367 Back     alignment and structure
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A* Length = 434 Back     alignment and structure
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A* Length = 442 Back     alignment and structure
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A* Length = 858 Back     alignment and structure
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A Length = 627 Back     alignment and structure
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* Length = 594 Back     alignment and structure
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} Length = 737 Back     alignment and structure
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* Length = 716 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query445
3rcn_A543 Beta-N-acetylhexosaminidase; structural genomics, 100.0
1now_A507 Beta-hexosaminidase beta chain; (beta/alpha)8-barr 100.0
2gjx_A507 Beta-hexosaminidase alpha chain; beta-hexosaminida 100.0
3ozo_A572 N-acetylglucosaminidase; beta-N-acetyl-D-hexosamin 100.0
3gh5_A525 HEX1, beta-hexosaminidase; beta-N-acetylhexosamini 100.0
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 100.0
1c7s_A858 Beta-N-acetylhexosaminidase; glycosyl hydrolase, c 100.0
2yl6_A434 Beta-N-acetylhexosaminidase; peptidoglycan-anchor, 100.0
2yl5_A442 Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Str 100.0
1yht_A367 DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact 100.0
2epl_X 627 N-acetyl-beta-D-glucosaminidase; glycoside hydrola 100.0
2v5c_A 594 O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol 99.97
2v5d_A 737 O-GLCNACASE NAGJ; family 32 carbohydrate binding m 99.97
2cho_A 716 Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro 99.91
2v5c_A 594 O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol 96.9
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 95.43
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 94.99
2v5d_A 737 O-GLCNACASE NAGJ; family 32 carbohydrate binding m 93.73
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 92.3
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 92.18
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 91.96
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 91.38
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 91.37
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 91.29
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 91.0
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 90.64
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 90.28
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 90.24
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 90.06
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 89.57
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 89.5
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 88.48
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 87.9
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 87.85
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 87.83
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 87.77
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 87.66
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 87.27
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 87.03
3ucq_A 655 Amylosucrase; thermostability, amylose synthesis, 86.79
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 86.77
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 86.58
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 85.48
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 85.3
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 84.25
4aie_A 549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 84.25
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 84.11
1bf2_A 750 Isoamylase; hydrolase, glycosidase, debranching en 84.1
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 83.19
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 82.53
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 82.4
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 82.32
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 82.16
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 81.87
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 81.56
2gjx_A507 Beta-hexosaminidase alpha chain; beta-hexosaminida 81.47
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 81.18
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 81.07
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 80.84
2bhu_A 602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 80.82
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 80.78
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 80.66
4f9d_A618 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; 80.02
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens} Back     alignment and structure
Probab=100.00  E-value=3.7e-95  Score=772.77  Aligned_cols=384  Identities=29%  Similarity=0.491  Sum_probs=330.3

Q ss_pred             ceeEeeCCCccccCccEEEEcCCeeEEEcCC---CCCCC--------------------cc----eeeccccCCccceee
Q 013337           40 GVRIWPMPLSVSHGHKSLYVGKDFKIMSQGS---KYKDA--------------------SG----ILKDGFSRFSFRGLL   92 (445)
Q Consensus        40 ~~~~~p~p~~~~~g~~~~~~~~~~~~~~~g~---~~~~~--------------------~~----il~~a~~rf~~RGlm   92 (445)
                      .+.+---+ ....++|+|+|++.++|.....   .||.+                    ..    +-..|.|||+|||+|
T Consensus        66 ~I~l~~~~-~l~~E~Y~L~v~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~m  144 (543)
T 3rcn_A           66 GIRLLLDP-SLDAEAYRLEVSDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTM  144 (543)
T ss_dssp             SEEEEECT-TSCTTCEEEEESSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEE
T ss_pred             cEEEEeCC-CCCCCceEEEECCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccc
Confidence            34443323 5678999999933566665332   22211                    11    335688999999999


Q ss_pred             eecCCCCCChHHHHHHHHHHHHcCCcEEEEEEecCCccceeeCCCCCCC-ccCCC-----------------CCCCCCHH
Q 013337           93 IDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-DGAYS-----------------TSERYTMA  154 (445)
Q Consensus        93 LD~aR~f~p~~~lk~~Id~Ma~~KlN~Lh~HltD~q~frle~~~~P~L~-~Gay~-----------------~~~~YT~~  154 (445)
                      ||+||||+|+++||++||.||++|||+|||||+||||||||+++||+|+ +|+|+                 .+++||++
T Consensus       145 LDvsRhf~~~~~ik~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~  224 (543)
T 3rcn_A          145 LDVARHFMPKDNVLRFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQD  224 (543)
T ss_dssp             EETTTSCCCHHHHHHHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHH
T ss_pred             cccCCCccCHHHHHHHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHH
Confidence            9999999999999999999999999999999999999999999999998 67753                 25799999


Q ss_pred             HHHHHHHHHHHcCCEEEeecCCchhhHHHHhhCCCCCCCC--------------CCCCCCCCCChHHHHHHHHHHHHHhh
Q 013337          155 DAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSLWPSK--------------DCQEPLDVSNEFTFKVIDGILSDFSK  220 (445)
Q Consensus       155 ei~eiv~yA~~rGI~VIPEID~PGH~~a~~~~ypel~~~~--------------~~~~~Ld~~~~~t~~fl~~ll~E~~~  220 (445)
                      |+++||+||++|||+||||||+|||+.+++++||+|...+              .+...||| +|+||+|+++|++|+++
T Consensus       225 di~eIv~YA~~rgI~VIPEID~PGH~~a~l~aypeL~~~~~~d~~~~~~~~~~g~~~~~L~p-~~~ty~fl~~v~~Ev~~  303 (543)
T 3rcn_A          225 DLREIVAFAADRHITVIPEIDVPGHSQAAIAAYPELGAGPADGSSPVEVWTRWGINETVLEV-SETSLEFYRNVLDEVVE  303 (543)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSCCC----CCCCCCCSCSCCSCCCCC-SHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEeeeeccchhHHHHHHhChhhccCccccCcccccccccCcCCCccCC-CHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999995421              12356999 99999999999999999


Q ss_pred             hcCCceEEecCCccccccccCCHHHHHHHHHCCCCh-hHHHHHHHHHHHHHHHHcCCeEEEecccccccCCCCCCCeEEE
Q 013337          221 VFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHSMNE-SQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVH  299 (445)
Q Consensus       221 lFp~~~~HiGgDEv~~~~w~~~p~~~~~~~~~g~~~-~~l~~~F~~~l~~~v~~~G~~~~~W~d~~~~~~~~l~~~~ii~  299 (445)
                      +||++||||||||+...||++||.|+++|+++|++. .+++.+|++++.++++++|+++++|+|++..   .|+++++|+
T Consensus       304 lFp~~~iHiGgDE~~~~~W~~~p~~~~~m~~~g~~~~~~L~~~f~~~v~~~l~~~Gk~~i~W~e~l~~---~l~~~~iv~  380 (543)
T 3rcn_A          304 IFPSPWISLGGDEVPLTQWQASAQAQAKAAELGLDDVSGLHSWFVGQLALHLKHHGRATSVWDEIGDG---GLPDGALVA  380 (543)
T ss_dssp             HCCCSEEEEECCCCCSHHHHTCHHHHHHHHHHTCSSTTHHHHHHHHHHHHHHHHTTCEEEESCC--------CCTTCEEE
T ss_pred             hCCCceEEEccccccccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHcCCEEEEEeccccc---CCCCCeEEE
Confidence            999999999999999999999999999999999865 4899999999999999999999999999853   799999999


Q ss_pred             ecCCCchHHHHHHcCCcEEEeCCCccccccCC-------------cchhccccCCcCCCCCChhhhcceeeeeeeecCCC
Q 013337          300 NWLGGGVAQRVVAAGLRCIVSNQDKWYLDHLD-------------TTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGET  366 (445)
Q Consensus       300 ~W~~~~~~~~~~~~G~~vI~s~~~~~Yld~~~-------------~~w~~~Y~~~p~~~~~~~~~~~~ilG~e~~lW~E~  366 (445)
                      +|++.....+++++||+||+|++++||||+.+             .+|+++|+++|.....+++++++|+|||+|||+|+
T Consensus       381 ~W~~~~~~~~~a~~G~~vI~s~~~~~YlD~~~~~~~~ep~~~~~~~~~~~~Y~~~P~~~~l~~~~~~~ilG~qa~lWsE~  460 (543)
T 3rcn_A          381 SWRGYEGGIDALRKGYDVVMCPEHKLYLDHRQADGDDEPVPVGFVTTLQAVYEFEPLPGVEGTDFPGRLLGAQANIWSEH  460 (543)
T ss_dssp             ECSCHHHHHHHHHTTCEEEECCTTTSBTTSCSSSSSSSSSCEESCCCHHHHHTCCSCCC---CCCSSCEEEEEEEECCSS
T ss_pred             EcCCchHHHHHHHCCCcEEEcCCCceeeecCCCCCCCCCccccCcCCHHHheeccCCcccCChhhhceeeeeeeeecccc
Confidence            99998778899999999999999999999864             47999999999743233456889999999999999


Q ss_pred             CCC-chhhHhhHHHHHHHHHHhcCCCCCCcccHHHHHHHHH-HHHHHHHHcCCCCCCCCCCCCCCC
Q 013337          367 VDA-SDIQQTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLA-HFRCLLNQRGIAAAPLAADTPLTQ  430 (445)
Q Consensus       367 ~~~-~~l~~~i~PR~~a~AE~~Ws~~~~~~~~~~~~~~Rl~-~~~~~l~~~gi~~~p~~~~~~~~~  430 (445)
                      +++ +++++++|||++|+||++||++..  +|+.+|..||. .|+|||+++||++.|...+.||..
T Consensus       461 v~~~~~~~~~~~PR~~AlAE~~Ws~~~~--~~~~~f~~Rl~~~~~~rl~~~Gi~~~p~~g~~~w~~  524 (543)
T 3rcn_A          461 LDSPRRVQFAAFPRLSAISEVFWSNPAG--RDYDEFLTRLTGAHLARLEAMGVEYRPLSGPAPWQQ  524 (543)
T ss_dssp             CCSHHHHHHHHTTHHHHHHHHHHSCGGG--CCHHHHHHHHHHTHHHHHHHTTCCCCCTTCCCGGGC
T ss_pred             cCCHHHhHHHHHhHHHHHHHHhhCCCcC--CCHHHHHHHHHHHHHHHHHHCCCCccCCCCCCCCCC
Confidence            986 579999999999999999997655  59999999998 999999999999999976676654
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B* Back     alignment and structure
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A* Back     alignment and structure
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A* Back     alignment and structure
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A* Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Back     alignment and structure
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A* Back     alignment and structure
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A* Back     alignment and structure
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A* Back     alignment and structure
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 Back     alignment and structure
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A Back     alignment and structure
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* Back     alignment and structure
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} Back     alignment and structure
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* Back     alignment and structure
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 445
d1nowa1353 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human ( 5e-96
d2gjxa1362 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human ( 1e-93
d1jaka1356 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {S 5e-75
d1yhta1344 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacill 8e-65
d1qbaa3443 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-a 6e-64
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 353 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-N-acetylhexosaminidase catalytic domain
domain: beta-hexosaminidase B
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  290 bits (743), Expect = 5e-96
 Identities = 128/349 (36%), Positives = 185/349 (53%), Gaps = 14/349 (4%)

Query: 86  FSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWD-GA 144
           FS RG+LIDTSRHY P+ II   +D+MA+ K NVLHWHIVD QSFP +  ++P+L + G+
Sbjct: 1   FSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGS 60

Query: 145 YSTSERYTMADAAEIVSYAQKRGINVLAELDVPGHALSWGKGYPSL-------WPSKDCQ 197
           YS S  YT  D   ++ YA+ RGI VL E D PGH LSWGKG   L           D  
Sbjct: 61  YSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSRQNKLDSF 120

Query: 198 EPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNTSCWTLTPHVSKWLKEHS--MN 255
            P++ +   T+  +     + S+VF  +F+HLGGDEV   CW   P +  ++++     +
Sbjct: 121 GPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTD 180

Query: 256 ESQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTV--VHNWLGGGVAQRVVAA 313
             +   +++ +   I        + W+E F++         V    +        RV A+
Sbjct: 181 FKKLESFYIQKVLDIIATINKGSIVWQEVFDDKAKLAPGTIVEVWKDSAYPEELSRVTAS 240

Query: 314 GLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQ 373
           G   I+S      L      W ++Y  EPL      +Q++L IGGE C+WGE VDA+++ 
Sbjct: 241 GFPVILSAPWYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIGGEACLWGEYVDATNLT 300

Query: 374 QTIWPRAAAAAERLWTPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPL 422
             +WPRA+A  ERLW+  D   ++      RL   RC + +RGIAA PL
Sbjct: 301 PRLWPRASAVGERLWSSKDV--RDMDDAYDRLTRHRCRMVERGIAAQPL 347
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 362 Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Length = 356 Back     information, alignment and structure
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} Length = 344 Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Length = 443 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query445
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 100.0
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 100.0
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 100.0
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 100.0
d1yhta1344 Dispersin B, DspB {Actinobacillus actinomycetemcom 100.0
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 95.19
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 95.17
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 93.7
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 93.7
d1g5aa2 554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 93.45
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 93.18
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 92.97
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 92.9
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 92.7
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 91.95
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 91.88
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 91.71
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 91.52
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 91.44
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 91.32
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 91.06
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 90.68
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 90.42
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 89.94
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 89.7
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 89.7
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 88.91
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 88.7
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 88.13
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 87.81
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 87.75
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 87.39
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 86.2
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 85.16
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 84.61
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 83.78
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 82.28
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 82.04
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 80.75
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 80.55
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-N-acetylhexosaminidase catalytic domain
domain: beta-hexosaminidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-91  Score=710.52  Aligned_cols=334  Identities=41%  Similarity=0.771  Sum_probs=305.9

Q ss_pred             CccceeeeecCCCCCChHHHHHHHHHHHHcCCcEEEEEEecCCccceeeCCCCCCC-ccCCCC-CCCCCHHHHHHHHHHH
Q 013337           86 FSFRGLLIDTSRHYQPLPIIKNVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-DGAYST-SERYTMADAAEIVSYA  163 (445)
Q Consensus        86 f~~RGlmLD~aR~f~p~~~lk~~Id~Ma~~KlN~Lh~HltD~q~frle~~~~P~L~-~Gay~~-~~~YT~~ei~eiv~yA  163 (445)
                      |+|||||||+||||+|+++||++||.||++|||+||||||||||||||+++||+|+ +|+|++ +++||++|+++||+||
T Consensus         1 f~~RG~mlD~aR~~~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA   80 (362)
T d2gjxa1           1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA   80 (362)
T ss_dssp             CSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHH
T ss_pred             CCccCeEEecCCCCcCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeccCCCchhhhcCCcCCCCCccCHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999998 788865 7899999999999999


Q ss_pred             HHcCCEEEeecCCchhhHHHHhhCCCCCCC---CC----CCCCCCCCChHHHHHHHHHHHHHhhhcCCceEEecCCcccc
Q 013337          164 QKRGINVLAELDVPGHALSWGKGYPSLWPS---KD----CQEPLDVSNEFTFKVIDGILSDFSKVFKYKFVHLGGDEVNT  236 (445)
Q Consensus       164 ~~rGI~VIPEID~PGH~~a~~~~ypel~~~---~~----~~~~Ld~~~~~t~~fl~~ll~E~~~lFp~~~~HiGgDEv~~  236 (445)
                      ++|||+||||||+|||+.+++++||+|...   ..    ..++|||++++||+|+++|++|++++||++||||||||++.
T Consensus        81 ~~rgI~vIPEiD~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lF~~~~iHiGgDE~~~  160 (362)
T d2gjxa1          81 RLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDF  160 (362)
T ss_dssp             HHTTCEEEEECCCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCS
T ss_pred             HHcCCEEEecccccchhHHHHHhChhhcCcccCCCCCCCcccccCCCcHHHHHHHHHHHHHHHHhhccceEEeecccccc
Confidence            999999999999999999999999999421   11    12479999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHCCCCh--hHHHHHHHHHHHHHHHHcCCeEEEecccccccCCCCCCCeEEEecCCC------chHH
Q 013337          237 SCWTLTPHVSKWLKEHSMNE--SQAYQYFVLQAQKIALLHGYEIVNWEETFNNFGNKLSPKTVVHNWLGG------GVAQ  308 (445)
Q Consensus       237 ~~w~~~p~~~~~~~~~g~~~--~~l~~~F~~~l~~~v~~~G~~~~~W~d~~~~~~~~l~~~~ii~~W~~~------~~~~  308 (445)
                      .||+++|.|+++|+++|++.  .+++.+|++++.++++++||++++|+|++.. ...+++++||+.|++.      ..+.
T Consensus       161 ~~w~~~p~~~~~~~~~g~~~~~~~l~~~f~~~~~~~l~~~gk~~i~W~d~~~~-~~~l~~d~ii~~W~~~~~~~~~~~~~  239 (362)
T d2gjxa1         161 TCWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDN-KVKIQPDTIIQVWREDIPVNYMKELE  239 (362)
T ss_dssp             HHHHHCHHHHHHHHHHTCTTCSHHHHHHHHHHHHHHHHTTTCEEEEEHHHHHT-TCCCCTTCEEEECCSSSSSCHHHHHH
T ss_pred             cccccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHcCCeeEeccccccc-CCCCCCCCeeeeeeccchhhHHHHHH
Confidence            99999999999999999853  4999999999999999999999999998754 4579999999999864      2456


Q ss_pred             HHHHcCCcEEEeCCCccccccCCcchhccccCCcCCCCCChhhhcceeeeeeeecCCCCCCchhhHhhHHHHHHHHHHhc
Q 013337          309 RVVAAGLRCIVSNQDKWYLDHLDTTWEQFYMNEPLTNITKSEQQKLVIGGEVCMWGETVDASDIQQTIWPRAAAAAERLW  388 (445)
Q Consensus       309 ~~~~~G~~vI~s~~~~~Yld~~~~~w~~~Y~~~p~~~~~~~~~~~~ilG~e~~lW~E~~~~~~l~~~i~PR~~a~AE~~W  388 (445)
                      .++++||++|+|++.++|.+..+.+|+++|+++|.....+++..++|+|||+|||+|++++.++++++|||++|+||++|
T Consensus       240 ~~~~~G~~~i~s~~~yl~~~~~g~~w~~~y~~~p~~~~~~~~~~~~ilG~e~~lW~E~i~~~~l~~~~~PRl~A~AE~~W  319 (362)
T d2gjxa1         240 LVTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLW  319 (362)
T ss_dssp             HHHHTTCEEEECTTCCTTSCBSSCTHHHHHHCCTTCSSCCHHHHTTEEEEEEEECTTSCSTTTHHHHHTTHHHHHHHHHH
T ss_pred             HHHhCCCeEEEecCccccccCCCCcccceeeeecccCccChhhhhceeeeEEEcccCCCCccchHHHHHHHHHHHHHHHh
Confidence            78899999999987666665567899999999998765567788899999999999999999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHcCCCCCCC
Q 013337          389 TPYDKLAKEAKQVTGRLAHFRCLLNQRGIAAAPL  422 (445)
Q Consensus       389 s~~~~~~~~~~~~~~Rl~~~~~~l~~~gi~~~p~  422 (445)
                      |++..  +|+.+|..||..|+++|.+|||++.|+
T Consensus       320 s~~~~--~d~~~f~~Rl~~~~~rL~~~Gi~~~p~  351 (362)
T d2gjxa1         320 SNKLT--SDLTFAYERLSHFRCELLRRGVQAQPL  351 (362)
T ss_dssp             SCTTC--CCHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHCCCCCcCC
Confidence            98766  499999999999999999999999999
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure