Citrus Sinensis ID: 013376

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440----
MGGCVSTSSRSTCSSRSNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccccccEEEEEccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccEEcccccccHHHHHHHcccEEEEccccccccEEEcccccccccHHHccccccccccccEEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccEEccccccccccccccccccccccccccHcHcHHHHHccccHcccccccEEEEcccccEEEEEEccccccccccEEEEEcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEcEEEEEccccHHHHHHHHHHHHcccEEEEccccccccEEEcccccccHHHHHHHHHHHHHHHccEEEcccEEEEEEcccccEEEEEccccHEEcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHEHHHHHcccccccccccc
mggcvstssrstcssrsngetvspiygccgqkrtkrtfsdhvitmhnlpsvphrifmngksrtsciftqqgrkginqDAMIVWEDFmsedvtfcgvfdghgphghLVARRVRDALPIKLLSFLLAsqsrqngpgktcfngntkkleagdsekdgpaedksnSLWREAYLKAYKSMDKelkshpnldcfcsgstaVTIVKQVWQGALHSLHLQFGEAERIKRCkgrvfalqdepevprvwlpfddapgLAMARAFGDFclkeygvisipefshrlltdrdQFIVLASdgvwdvlsNEEVVEIVSSAPTRSSAARILVDAAAREWKlkyptskmddcaVVCLFLdgkmdlesdyeeqgfssatiqsnhsgnaiesddgqksepslqrnftvrssdesdtygrlvveddgngetfpgedqnwsglegvtrvnslvqlprfseerpnp
mggcvstssrstcssrsngetvspiygccgqkrTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFllasqsrqngpgktcfngntkkleagdsekdgpaedksnslWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVfalqdepevprVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEivssaptrssaaRILVDAAAREWKlkyptskmddcAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNaiesddgqksepslqrnftvrssdesdtygRLVVEDDGNGETFpgedqnwsglegvtrvnslvqlprfseerpnp
MGGCVstssrstcssrsNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
**********************SPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLA**************************************WREAYLKAYKSM***LKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKM**************************************************************************************************
*G******************************************************MNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEA********AEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLF***********************************************************************************VTRVNSLVQ***********
********************TVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEA************SNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHS****************QRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLP*********
**********************************************NLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQS**************************PAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDG**************************************************************************WS*LEGVTRVNSLVQLPRFS******
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SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGCVSTSSRSTCSSRSNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query444 2.2.26 [Sep-21-2011]
Q8GY60468 Probable protein phosphat yes no 0.970 0.920 0.675 1e-167
Q9LR65462 Probable protein phosphat no no 0.952 0.915 0.630 1e-158
Q8H4S6427 Probable protein phosphat yes no 0.806 0.838 0.558 1e-124
Q6ZKL8531 Probable protein phosphat no no 0.889 0.743 0.468 2e-99
Q8RXZ4504 Probable protein phosphat no no 0.867 0.763 0.433 4e-98
Q9SA22491 Probable protein phosphat no no 0.869 0.786 0.448 8e-97
Q9M8R7492 Probable protein phosphat no no 0.963 0.869 0.436 3e-95
Q9FG61448 Probable protein phosphat no no 0.795 0.787 0.440 1e-91
Q2R637432 Probable protein phosphat no no 0.804 0.826 0.413 3e-84
Q6K6N7518 Probable protein phosphat no no 0.815 0.698 0.430 4e-83
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function desciption
 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 321/475 (67%), Positives = 368/475 (77%), Gaps = 44/475 (9%)

Query: 1   MGGCVSTSSRSTCSSRSNGETVSPI------YGCCGQKRTKRTFSDHVITMHNLPSVPHR 54
           MGGCVSTSS+STCSS SNGE   P+       GCC  KR KRTFSDH++++ NL S+P+R
Sbjct: 1   MGGCVSTSSKSTCSSWSNGE--KPVRRPYLGIGCCVSKRAKRTFSDHIVSLQNLTSIPNR 58

Query: 55  IFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDA 114
           I  + KSR+SCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGP+GHLVAR+VRD 
Sbjct: 59  ITSSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPYGHLVARKVRDT 118

Query: 115 LPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKS 174
           LP+KL  F    QS+QN    T F  N+ K    ++ K+G  EDK   LW EA+LK++K+
Sbjct: 119 LPVKLQFFFQTLQSKQNCSKGTRFRRNSSKSAVQEAVKEGSDEDKLKGLWGEAFLKSFKA 178

Query: 175 MDKELKSHPNLDCFCSGSTAVTIVKQ---VWQGALHSLHLQFG----------------- 214
           MDKEL+SHPNLDCFCSGST VTI+KQ   ++ G +       G                 
Sbjct: 179 MDKELRSHPNLDCFCSGSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDL 238

Query: 215 ------EAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIP 268
                 EAERIKRCKGRVFA++DEPEVPRVWLP+DDAPGLAMARAFGDFCLKEYGVIS+P
Sbjct: 239 KPDLPREAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISVP 298

Query: 269 EFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYP 328
           EF+HR+LTDRDQFIVLASDGVWDVLSNEEVV+IV+SA +R+SAAR LV++AAREWKLKYP
Sbjct: 299 EFTHRVLTDRDQFIVLASDGVWDVLSNEEVVDIVASATSRASAARTLVNSAAREWKLKYP 358

Query: 329 TSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFT 388
           TSKMDDCAVVCLFLDGKMD ESDY+EQGFSSAT       NA+ESDDGQ+SEP LQRNFT
Sbjct: 359 TSKMDDCAVVCLFLDGKMDSESDYDEQGFSSAT-------NAVESDDGQRSEPCLQRNFT 411

Query: 389 VRSS--DESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEER 441
           VRSS   E++TYG +  E D   E   G DQNW GL+GVTRVNSLVQLPRFSEE+
Sbjct: 412 VRSSSDQENETYGNVNTETDAEDEKTVG-DQNWLGLQGVTRVNSLVQLPRFSEEK 465

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query444
224124576473 predicted protein [Populus trichocarpa] 0.997 0.936 0.778 0.0
255553839473 protein phosphatase-2c, putative [Ricinu 1.0 0.938 0.790 0.0
224127140474 predicted protein [Populus trichocarpa] 0.995 0.932 0.771 0.0
225447223473 PREDICTED: probable protein phosphatase 0.997 0.936 0.769 0.0
356542897471 PREDICTED: probable protein phosphatase 0.986 0.929 0.776 0.0
356517540471 PREDICTED: probable protein phosphatase 0.984 0.927 0.774 0.0
357470863470 hypothetical protein MTR_4g037470 [Medic 0.986 0.931 0.740 0.0
356549938475 PREDICTED: probable protein phosphatase 0.995 0.930 0.736 0.0
356543811474 PREDICTED: probable protein phosphatase 0.995 0.932 0.748 0.0
297739254447 unnamed protein product [Vitis vinifera] 0.939 0.932 0.720 0.0
>gi|224124576|ref|XP_002319366.1| predicted protein [Populus trichocarpa] gi|222857742|gb|EEE95289.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/474 (77%), Positives = 403/474 (85%), Gaps = 31/474 (6%)

Query: 1   MGGCVSTSSRSTCSSRSNGETVSPI---YGCCGQKRTKRTFSDHVITMHNLPSVPHRIFM 57
           MG CVSTS RSTCSS+SNGE V P     G CGQKRTKRTFSDH++T+ +LPS+ +R+F 
Sbjct: 1   MGACVSTS-RSTCSSKSNGEPVPPPCLGIGFCGQKRTKRTFSDHLVTLQHLPSISNRVFT 59

Query: 58  NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPI 117
           NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVAR+VRDALP+
Sbjct: 60  NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVRDALPV 119

Query: 118 KLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDK 177
           KL SFL + QSRQN PG+TCF GN+KK + GD +KDG  EDK NSLWRE +LK+YK+MDK
Sbjct: 120 KLQSFLNSCQSRQNEPGQTCFTGNSKKSDVGDLDKDGSVEDKLNSLWRETFLKSYKAMDK 179

Query: 178 ELKSHPNLDCFCSGSTAVTIVKQ---VWQGALHSLHLQFG-------------------- 214
           ELKSHPNLDCFCSGSTA+TIVKQ   ++ G +       G                    
Sbjct: 180 ELKSHPNLDCFCSGSTAITIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAVQLTVDLKPD 239

Query: 215 ---EAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS 271
              EAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS
Sbjct: 240 LPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS 299

Query: 272 HRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSK 331
           HR LTD+DQFIVLASDGVWDVLSNEEVV IVSSAPTR+SAARILVD+AAREWKLKYPTSK
Sbjct: 300 HRTLTDKDQFIVLASDGVWDVLSNEEVVGIVSSAPTRASAARILVDSAAREWKLKYPTSK 359

Query: 332 MDDCAVVCLFLDGKMDLESDYEEQGFSSATI-QSNHSGNAIESDDGQKSEPSLQRNFTVR 390
           MDDCAVVCLFLDGKMD ESDY+EQGFSSAT+ QSNHSGNA ESDDGQKSEP LQRNFTVR
Sbjct: 360 MDDCAVVCLFLDGKMDSESDYDEQGFSSATLDQSNHSGNAAESDDGQKSEPCLQRNFTVR 419

Query: 391 SSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP 444
           S++E+DTYGRL VE DG+GET   +DQ+WSGLEGVTRVNSLVQLPRFSEERP+P
Sbjct: 420 SAEENDTYGRLAVEVDGDGETVSADDQSWSGLEGVTRVNSLVQLPRFSEERPDP 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553839|ref|XP_002517960.1| protein phosphatase-2c, putative [Ricinus communis] gi|223542942|gb|EEF44478.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127140|ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|222870460|gb|EEF07591.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447223|ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 52 [Vitis vinifera] gi|147802577|emb|CAN68594.1| hypothetical protein VITISV_011855 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542897|ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|356517540|ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|357470863|ref|XP_003605716.1| hypothetical protein MTR_4g037470 [Medicago truncatula] gi|355506771|gb|AES87913.1| hypothetical protein MTR_4g037470 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356549938|ref|XP_003543347.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|356543811|ref|XP_003540353.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|297739254|emb|CBI28905.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query444
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.493 0.467 0.799 2.5e-162
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.493 0.474 0.761 5.7e-152
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.488 0.430 0.533 4.9e-96
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.502 0.454 0.537 8.9e-92
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.358 0.354 0.584 5.7e-86
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.286 0.354 0.582 1.7e-65
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.666 0.774 0.430 1.2e-60
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.614 0.731 0.421 1.5e-60
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.286 0.361 0.511 2e-59
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.295 0.395 0.560 2.7e-56
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 936 (334.5 bits), Expect = 2.5e-162, Sum P(2) = 2.5e-162
 Identities = 183/229 (79%), Positives = 203/229 (88%)

Query:   215 EAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRL 274
             EAERIKRCKGRVFA++DEPEVPRVWLP+DDAPGLAMARAFGDFCLKEYGVIS+PEF+HR+
Sbjct:   245 EAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISVPEFTHRV 304

Query:   275 LTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDD 334
             LTDRDQFIVLASDGVWDVLSNEEVV+IV+SA +R+SAAR LV++AAREWKLKYPTSKMDD
Sbjct:   305 LTDRDQFIVLASDGVWDVLSNEEVVDIVASATSRASAARTLVNSAAREWKLKYPTSKMDD 364

Query:   335 CAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSD- 393
             CAVVCLFLDGKMD ESDY+EQGFSSAT       NA+ESDDGQ+SEP LQRNFTVRSS  
Sbjct:   365 CAVVCLFLDGKMDSESDYDEQGFSSAT-------NAVESDDGQRSEPCLQRNFTVRSSSD 417

Query:   394 -ESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEER 441
              E++TYG +  E D   E   G DQNW GL+GVTRVNSLVQLPRFSEE+
Sbjct:   418 QENETYGNVNTETDAEDEKTVG-DQNWLGLQGVTRVNSLVQLPRFSEEK 465
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0006470 "protein dephosphorylation" evidence=IDA
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8H4S6P2C64_ORYSJ3, ., 1, ., 3, ., 1, 60.55860.80630.8384yesno
Q8GY60P2C52_ARATH3, ., 1, ., 3, ., 1, 60.67570.97070.9209yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query444
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-48
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-37
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 4e-19
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-12
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-06
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 7e-04
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  166 bits (422), Expect = 1e-48
 Identities = 85/302 (28%), Positives = 122/302 (40%), Gaps = 83/302 (27%)

Query: 69  QQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQS 128
           + G +  N+DA+++  +  +ED    GVFDGHG  GH         L  +LL  L  +  
Sbjct: 8   KGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEET-- 63

Query: 129 RQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKEL--KSHPNLD 186
                                          S     EA  KA+   D+E+  ++    D
Sbjct: 64  ----------------------------LTLSEEDIEEALRKAFLRADEEILEEAQDEPD 95

Query: 187 CFCSGSTAVTIVKQVWQGALHSLHL-----------------------QFGEAERIKRCK 223
              SG+TAV  +  +    L+  ++                          E ERI++  
Sbjct: 96  DARSGTTAVVAL--IRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAG 153

Query: 224 GRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIV 283
           GRV          RV         LA+ RA GDF LK  GV + P+ +   LT+ D F++
Sbjct: 154 GRVS-------NGRV------PGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLI 199

Query: 284 LASDGVWDVLSNEEVVEIVSSAPTRSS---AARILVDAAAREWKLKYPTSKMDDCAVVCL 340
           LASDG+WDVLSN+E V+IV S   +     AA+ LVD A R           D+  VV +
Sbjct: 200 LASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG-------SHDNITVVVV 252

Query: 341 FL 342
            L
Sbjct: 253 RL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 444
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.97
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.97
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.97
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.85
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.74
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.43
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.34
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.13
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 98.93
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.73
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 80.95
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=5.3e-43  Score=351.92  Aligned_cols=242  Identities=34%  Similarity=0.499  Sum_probs=206.9

Q ss_pred             ccCCccceeeeeeccCCCCCCCceEEeeccCC-----CC-CceEEEeecCCCcCchHHHHHHHHHHHHHHHHHHHhhccc
Q 013376           56 FMNGKSRTSCIFTQQGRKGINQDAMIVWEDFM-----SE-DVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSR  129 (444)
Q Consensus        56 ~~~g~~~~~~~~s~~G~R~~NED~~~v~~~~~-----~~-~~~l~gVfDGHG~~G~~aa~~a~~~l~~~l~~~l~~~~~~  129 (444)
                      ..++....++.++++|+|..|||++.....+.     .. ...|||||||||  |+.+|+|++++|+..|..++....  
T Consensus        34 ~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~--  109 (330)
T KOG0698|consen   34 SINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPK--  109 (330)
T ss_pred             cccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhccc--
Confidence            33445566777899999999999999887654     23 589999999999  999999999999999988766531  


Q ss_pred             CCCCCCcccCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHH-HHHHHHhcCCCCCCcCCCCcEEEEEEec----ccc
Q 013376          130 QNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYK-SMDKELKSHPNLDCFCSGSTAVTIVKQV----WQG  204 (444)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~af~-~id~~l~~~~~~~~~~sGTTav~~li~~----~va  204 (444)
                                                   . ...+++++.++|. .+|..+..+ ..+...+|||++++++..    |||
T Consensus       110 -----------------------------~-~~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~va  158 (330)
T KOG0698|consen  110 -----------------------------D-RQDVKDALRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVA  158 (330)
T ss_pred             -----------------------------c-hHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEE
Confidence                                         0 1567888889999 699988765 222345688888877763    999


Q ss_pred             cee------------eEeCC-------HHHHHHHHHcCCEEEeccCCCCCCeeecCCCCCCCccccccCCCccccccCcc
Q 013376          205 ALH------------SLHLQ-------FGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVI  265 (444)
Q Consensus       205 NvG------------a~~LT-------~~E~~RI~~~gG~V~~~~d~~~~~Rvw~~~~~~g~La~sRA~GD~~lK~~gv~  265 (444)
                      |+|            +++||       ++|+.||+++||+|.....   +.||      .|.|+|||||||+.+|.++++
T Consensus       159 N~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~---~~Rv------~G~LavsRa~GD~~~k~~~v~  229 (330)
T KOG0698|consen  159 NVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGG---VWRV------NGVLAVSRAFGDVELKSQGVI  229 (330)
T ss_pred             EcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC---cceE------eceEEEeeecCCHHhcCCcEe
Confidence            999            78899       7999999999999997543   6788      689999999999999977799


Q ss_pred             cCceEEEEEcCCCCeEEEEeccccccCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCceEEEEEE
Q 013376          266 SIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS----APTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLF  341 (444)
Q Consensus       266 ~~Pdv~~~~l~~~D~fLVLaSDGLwD~ls~~eiv~iv~~----~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~  341 (444)
                      ++|||.+..+++.|+|||||||||||+|++||++++|+.    ...+..+++.|.+.|+.+       ++.||||||||+
T Consensus       230 a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-------~s~DnitvvvV~  302 (330)
T KOG0698|consen  230 AEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-------GSKDNITVVVVR  302 (330)
T ss_pred             cCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-------CCCCCeEEEEEE
Confidence            999999999999999999999999999999999999998    568999999999999998       999999999999


Q ss_pred             cCCCCCC
Q 013376          342 LDGKMDL  348 (444)
Q Consensus       342 l~~~~~~  348 (444)
                      |.++...
T Consensus       303 l~~~~~~  309 (330)
T KOG0698|consen  303 LKSSPKS  309 (330)
T ss_pred             ecCcccc
Confidence            9987553

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query444
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 5e-09
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-07
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-07
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-07
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-07
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-07
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-07
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 4e-06
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 8e-06
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 9e-06
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-05
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-05
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 4e-05
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 4e-05
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 6e-05
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-05
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 3e-04
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure 
Iteration: 1

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 46/236 (19%)
Query: 89  EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAG 148
           ED +F  V+DGH         RV +     LL  +  ++  +   GK+   G+  +L   
Sbjct: 53  EDWSFFAVYDGHA------GSRVANYCSTHLLEHITTNEDFR-AAGKS---GSALELSV- 101
Query: 149 DSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQVWQGALHS 208
           ++ K+G    ++  L  + Y++ +  +   +          SGSTAV ++        H 
Sbjct: 102 ENVKNGI---RTGFLKIDEYMRNFSDLRNGMDR--------SGSTAVGVMIS----PKHI 146
Query: 209 LHLQFGEAERIKRCKGRV-FALQD-EPEVPRVWLPFDDAPG----------LAMARAFGD 256
             +  G++  +    G+V F+ QD +P  PR      +A G          LA++RA GD
Sbjct: 147 YFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGD 206
Query: 257 FCLK--------EYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS 304
           +  K        E  V   PE    L  + D+FI+LA DG+WDV+SNEE+ E V S
Sbjct: 207 YDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKS 262
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query444
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 5e-76
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-38
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 5e-37
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 6e-37
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-36
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-33
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-30
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 6e-30
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 9e-30
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 4e-29
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-26
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-22
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-04
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 6e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  239 bits (611), Expect = 5e-76
 Identities = 75/339 (22%), Positives = 124/339 (36%), Gaps = 59/339 (17%)

Query: 43  ITMHNLP--SVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMS--EDVTFCGVFD 98
           +TM   P   VP           + IFT  G +   +D   +    +   +D  F GVFD
Sbjct: 2   LTMDVPPTIHVPLPPTSYPAFD-AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFD 60

Query: 99  GHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAED 158
           G    G   +  V+D +  +L+S     +  +                          ++
Sbjct: 61  GTV--GDFASENVKDLVVPQLISSPAWQEVTE---------------MLRSDVPATEVDE 103

Query: 159 KSNSLWREAYLKAYKSMDKE-LKSHPNLDCFCSGSTAVTIVKQ----------------- 200
           K   L  +A    YK+ D E +K    L+   + ST+VT V                   
Sbjct: 104 KLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMG 163

Query: 201 -VWQGALHSLHL-------QFGEAERIKRCKGRVFALQDEPEVPRVWL--------PFDD 244
                 L+   L          E  RI R  G V  L +    P +            + 
Sbjct: 164 VETPNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQ 223

Query: 245 APGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS 304
              L  +RAFG   LK YG+ + P+     +T + + ++LA+DG+WDV+S  + VEI   
Sbjct: 224 PMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQ 283

Query: 305 APTR-SSAARILVDAAAREWKLKYPTSKMDDCAVVCLFL 342
           A     + A+ LV+    E + +  ++  D+   + +F 
Sbjct: 284 ARQEGRNPAQALVEMTLAEQQSRNQSA--DNITAMTVFF 320
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query444
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.98
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.98
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.97
3rnr_A211 Stage II sporulation E family protein; structural 99.93
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.56
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.5
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.31
3f79_A255 Probable two-component response regulator; adaptor 99.24
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.58
3eq2_A394 Probable two-component response regulator; adaptor 97.48
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 86.71
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=2.1e-41  Score=340.40  Aligned_cols=244  Identities=30%  Similarity=0.419  Sum_probs=194.5

Q ss_pred             eeeeeeccCCCCCCCceEEeeccCCC-------------------CCceEEEeecCCCcCchHHHHHHHHHHHHHHHHHH
Q 013376           63 TSCIFTQQGRKGINQDAMIVWEDFMS-------------------EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFL  123 (444)
Q Consensus        63 ~~~~~s~~G~R~~NED~~~v~~~~~~-------------------~~~~l~gVfDGHG~~G~~aa~~a~~~l~~~l~~~l  123 (444)
                      .++..+++|+|.+|||++++..+|..                   .+..|||||||||  |+.+++++++.++..|.+.+
T Consensus        15 ~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~~~~   92 (337)
T 3qn1_B           15 LWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLHFALAEEI   92 (337)
T ss_dssp             CEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHHHHHHHHH
Confidence            45666667777777777766544321                   2578999999999  99999999999999999887


Q ss_pred             HhhcccCCCCCCcccCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhcCC-------------CCCCcCC
Q 013376          124 LASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHP-------------NLDCFCS  190 (444)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~af~~id~~l~~~~-------------~~~~~~s  190 (444)
                      ........                     ...........++++|.++|..+|+++....             ......+
T Consensus        93 ~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~  151 (337)
T 3qn1_B           93 ERIKDELC---------------------KRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETV  151 (337)
T ss_dssp             HHTC---------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTC
T ss_pred             Hhhhhhhh---------------------ccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCC
Confidence            75421100                     0000012235678899999999999987644             1223467


Q ss_pred             CCcEEEEEEec---ccccee-----------eEeCC-------HHHHHHHHHcCCEEEeccCCCCCCeeecCCCCCCCcc
Q 013376          191 GSTAVTIVKQV---WQGALH-----------SLHLQ-------FGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLA  249 (444)
Q Consensus       191 GTTav~~li~~---~vaNvG-----------a~~LT-------~~E~~RI~~~gG~V~~~~d~~~~~Rvw~~~~~~g~La  249 (444)
                      |||++++++.+   |++|||           +++||       +.|..||...||+|....    -.|+      .+.++
T Consensus       152 GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~----~~r~------~g~l~  221 (337)
T 3qn1_B          152 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQ----GARV------FGVLA  221 (337)
T ss_dssp             EECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESS----SEEE------TTTBS
T ss_pred             CceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecC----Ccee------cCccc
Confidence            99999999988   999999           78898       789999999999998632    2466      78999


Q ss_pred             ccccCCCccccccCcccCceEEEEEcCCCCeEEEEeccccccCCCHHHHHHHHHc---------------------CCCH
Q 013376          250 MARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS---------------------APTR  308 (444)
Q Consensus       250 ~sRA~GD~~lK~~gv~~~Pdv~~~~l~~~D~fLVLaSDGLwD~ls~~eiv~iv~~---------------------~~~~  308 (444)
                      +||||||+.+|++ ++++|+|..+.+.+.++|||||||||||+|+++||+++++.                     ..++
T Consensus       222 ~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (337)
T 3qn1_B          222 MSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPAC  300 (337)
T ss_dssp             CSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHH
T ss_pred             cccccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhH
Confidence            9999999999987 99999999999988788999999999999999999999986                     4457


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCCCCceEEEEEEcCCCCC
Q 013376          309 SSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMD  347 (444)
Q Consensus       309 ~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~~~~~  347 (444)
                      +.+|+.|++.|+.+       ++.||||||||+|+.+..
T Consensus       301 ~~~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~~  332 (337)
T 3qn1_B          301 QAAADYLSMLALQK-------GSKDNISIIVIDLKAQRK  332 (337)
T ss_dssp             HHHHHHHHHHHHHT-------TCCSCEEEEEEECCSCC-
T ss_pred             HHHHHHHHHHHHHc-------CCCCCEEEEEEEecCCcc
Confidence            89999999999998       999999999999987543
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 444
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-22
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 4e-11
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (232), Expect = 4e-22
 Identities = 60/301 (19%), Positives = 96/301 (31%), Gaps = 61/301 (20%)

Query: 70  QGRKGINQDAMIVWEDFMS--EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQ 127
           QG +   +DA        S  E  +F  V+DGH   G  VA+   + L   + +      
Sbjct: 29  QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQ---- 82

Query: 128 SRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHP--NL 185
                                  +  G A   S    +      +  +D+ ++       
Sbjct: 83  -----------------------DFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH 119

Query: 186 DCFCSGSTAVTIVKQVWQG--ALHSLHLQFGEAERIKRCKGRVFALQDEPEVPRV----- 238
               SGSTAV ++                     R      +     +  E  R+     
Sbjct: 120 GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG 179

Query: 239 -WLPFDDAPGLAMARAFGDFCLK--------EYGVISIPEFSH-RLLTDRDQFIVLASDG 288
             +       LA++RA GDF  K        E  V   PE        + DQFI+LA DG
Sbjct: 180 SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG 239

Query: 289 VWDVLSNEEVVEIVSSAPTRSS----AARILVDAAAREWKLKYPTSKMDDCAVVCLFLDG 344
           +WDV+ NEE+ + V S    +         +VD    +          D+ +V+ +    
Sbjct: 240 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG-------SRDNMSVILICFPN 292

Query: 345 K 345
            
Sbjct: 293 A 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query444
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 87.81
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-45  Score=358.44  Aligned_cols=236  Identities=27%  Similarity=0.316  Sum_probs=197.2

Q ss_pred             ceeeeeeccCCCCCCCceEEeeccCCC--CCceEEEeecCCCcCchHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccC
Q 013376           62 RTSCIFTQQGRKGINQDAMIVWEDFMS--EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFN  139 (444)
Q Consensus        62 ~~~~~~s~~G~R~~NED~~~v~~~~~~--~~~~l~gVfDGHG~~G~~aa~~a~~~l~~~l~~~l~~~~~~~~~~~~~~~~  139 (444)
                      ..+++.++||+|.+|||++++..++..  .+..|||||||||  |+.+|++++++|+..|.+.+.......         
T Consensus        21 ~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~~---------   89 (295)
T d1a6qa2          21 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAG---------   89 (295)
T ss_dssp             EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSSS---------
T ss_pred             eEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhccccc---------
Confidence            457888999999999999998877644  5678999999999  999999999999999987665432111         


Q ss_pred             CCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhcC--CCCCCcCCCCcEEEEEEec---ccccee-------
Q 013376          140 GNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSH--PNLDCFCSGSTAVTIVKQV---WQGALH-------  207 (444)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~af~~id~~l~~~--~~~~~~~sGTTav~~li~~---~vaNvG-------  207 (444)
                                        ....+.++++|.++|..+++.+...  .......+|||++++++.+   ||||||       
T Consensus        90 ------------------~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~  151 (295)
T d1a6qa2          90 ------------------APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC  151 (295)
T ss_dssp             ------------------SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEE
T ss_pred             ------------------cchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEe
Confidence                              1334567777888888887766432  1122345799999999998   999999       


Q ss_pred             ----eEeCC-------HHHHHHHHHcCCEEEeccCCCCCCeeecCCCCCCCccccccCCCccccccC--------cccCc
Q 013376          208 ----SLHLQ-------FGEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYG--------VISIP  268 (444)
Q Consensus       208 ----a~~LT-------~~E~~RI~~~gG~V~~~~d~~~~~Rvw~~~~~~g~La~sRA~GD~~lK~~g--------v~~~P  268 (444)
                          +++||       +.|++||.+.||.|..       .|+      .+.|++||||||+.+|..+        ++++|
T Consensus       152 ~~~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~P  218 (295)
T d1a6qa2         152 RNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP  218 (295)
T ss_dssp             ETTEEEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCC
T ss_pred             ecccceeeccccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccccccccc
Confidence                77888       8899999999999973       566      8999999999999998643        89999


Q ss_pred             eEEEEEcC-CCCeEEEEeccccccCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCceEEEEEEcC
Q 013376          269 EFSHRLLT-DRDQFIVLASDGVWDVLSNEEVVEIVSS----APTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLD  343 (444)
Q Consensus       269 dv~~~~l~-~~D~fLVLaSDGLwD~ls~~eiv~iv~~----~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~  343 (444)
                      ||..+.+. ++|+|||||||||||+|+++||+++|++    ..+++.+|+.|++.|+++       ++.||||||||+|+
T Consensus       219 di~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~DNiTvivv~~~  291 (295)
T d1a6qa2         219 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSRDNMSVILICFP  291 (295)
T ss_dssp             EEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCCSCEEEEEEECT
T ss_pred             cceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCeEEEEEecc
Confidence            99999986 6678999999999999999999999875    367999999999999998       78999999999998


Q ss_pred             CCC
Q 013376          344 GKM  346 (444)
Q Consensus       344 ~~~  346 (444)
                      ..+
T Consensus       292 ~~~  294 (295)
T d1a6qa2         292 NAP  294 (295)
T ss_dssp             TSC
T ss_pred             CCC
Confidence            653
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure