Citrus Sinensis ID: 013451


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440--
MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
cEEEEEEEEcccccEEEccccccccEEEEcccEEEEccccEEEEEEccccccccccccHHHHccccEEEccccccccccccccEEEEEEccccccccccccccEEEEccEEEEEEccccccccHHHHHccHHHHHHccccccEEEEEEEcccccccccHHHHHccccccccccccccccEEEEcEEEEEcEEEcccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccEEEEEcHHHHHHHcccccccEEEEEEEcccccccccccHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccEEEcccccEEEEHHHHHHHHHHHHHHHHHHcccccccccc
cEEEEEEEEccccEEEEccccccccEEEEEccEEEcccccEEEEEccccccccccccccccccccccEEccccccccHHHHcccEEEEEEEcccccccccccccEccccEEEEEccccccccccccccEEEEEEEEHHHccccEEEEEEcccHHHHHHHHHHHHHHccccEEEccccccEEccccEEEEEEccccccEccccccccccHHHHHHHHHHHHccccHcccccccccHHHHcccccccccccccccccccccccccEEEEEEccccEEEEcHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEEEcccccHcEEEcccccEEEEEEcccHHHHHHHHccccHHHcccEEEEEEEccccccHHHHccccccccccHHHHHHccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHcccccccc
MIYLFYFVVGFtgticcdrsgirtdvcimkgdvrtnsassSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsVMDTIDELDLVVKKEnetanhhcdvvhdvpavffstggytgnvyhefndgilplyitsqHLKKKVVFVILEYHNWWIMKYGDILsrlsdyppidfsgdkrthcfpeaivglrihdeltvdpslmrgnknaidFRNVLDQAYWPRIRGLIQDEEREAREklslspssdpsfknvkevqgdqskkpklvILSRngsraitnenSLVKMAEDIgfqvqvvrpdrTSELAKIYRALNSSDVMVGVHGAAMTHFlfmkpgsvfiqviplgtdwaaetyygeparklglkyigytilpresslydqydkndpvlrdpssvnekgwQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSInrisqnchhqsq
MIYLFYFVVGFTgticcdrsgiRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsvmDTIDELDLVVKKENEtanhhcdvvhDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSlmrgnknaIDFRNVLDQAYWPRIRGLIQDEEREAREKlslspssdpsfknvkevqgdqskkpklvilsrngsraitnenslvkmaediGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKndpvlrdpssvnekgWQYTKtiyldgqnvrlNLRRFQKRLVRAYDYSinrisqnchhqsq
MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
*IYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI***************************************************NSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYD***********VNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNG****************EKIRPYTRKWETSVMDTIDELDLVVKK***TANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFK********QSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDY**************
MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEE****************************KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNT*****************HEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI*******************************SKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRI*********
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MIYLFYFVVGFTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query442 2.2.26 [Sep-21-2011]
A0JND3527 EGF domain-specific O-lin yes no 0.592 0.497 0.255 3e-11
Q5NDL2527 EGF domain-specific O-lin yes no 0.572 0.480 0.251 2e-10
Q5NDL1527 EGF domain-specific O-lin yes no 0.572 0.480 0.251 3e-10
Q5NDL0527 EGF domain-specific O-lin yes no 0.619 0.519 0.250 4e-10
Q5NDL9527 EGF domain-specific O-lin yes no 0.572 0.480 0.248 2e-09
Q8BYW9527 EGF domain-specific O-lin yes no 0.617 0.518 0.244 4e-09
Q5NDL3535 EGF domain-specific O-lin yes no 0.597 0.493 0.241 5e-09
Q5NDE3 579 Glycosyltransferase-like N/A no 0.502 0.383 0.242 2e-07
Q08CY9525 EGF domain-specific O-lin yes no 0.513 0.432 0.243 2e-06
Q5NDE4 590 Glycosyltransferase-like N/A no 0.513 0.384 0.229 3e-06
>sp|A0JND3|EOGT_BOVIN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Bos taurus GN=EOGT PE=2 SV=1 Back     alignment and function desciption
 Score = 70.1 bits (170), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 59/321 (18%)

Query: 102 CDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKV---VFVILEYHNWWIMK 158
           CD+V + P  F        N+YH F D I  LYIT QH+       V+V++    W    
Sbjct: 227 CDIVIEKPTYFMKLDAGV-NMYHHFCDFI-NLYIT-QHVNNSFSTDVYVVM----WDTSS 279

Query: 159 YG------DILSRLSDYPPIDF-SGDKRTHCFPEAIVGL--RIHDELTVDPSLMRGNKNA 209
           YG      D     +DY  I   + D +  CF EAI  L  R+   L  +  L+ G +N 
Sbjct: 280 YGYGDLFSDTWKAFTDYDVIHLKTYDAKRVCFKEAIFSLLPRMRYGLFYNTPLISGCQNT 339

Query: 210 IDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILS 269
                           GL +   +    +L+++             +G +  K ++ IL+
Sbjct: 340 ----------------GLFRAFSQHVLHRLNITQ------------EGPKGGKIRVTILA 371

Query: 270 RNGS-RAITNENSLVKMAEDIG-FQVQVVRPDRTSELAKI--YRALNSSDVMVGVHGAAM 325
           R+   R I N+N LV   + +  F+VQ+V   +  EL  +   R  +++D+ +G+HGA +
Sbjct: 372 RSTEYRKILNQNELVNALKTVSTFEVQIVDY-KYKELGFLDQLRITHNTDIFIGMHGAGL 430

Query: 326 THFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDP 385
           TH LF+   +   ++   G     E  Y + AR  G+ YI +    R++ ++ Q   + P
Sbjct: 431 THLLFLPDWAAVFELYNCGD----ERCYLDLARLRGVHYITWR---RQNKVFPQDKGHHP 483

Query: 386 VLRDPSSVNEKGWQYTKTIYL 406
            L +        +   + +YL
Sbjct: 484 TLGEHPKFTNYSFDVEEFMYL 504





Bos taurus (taxid: 9913)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q5NDL2|EOGT_HUMAN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Homo sapiens GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL1|EOGT_PANTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Pan troglodytes GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL0|EOGT_RAT EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus GN=Eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL9|EOGT_CANFA EGF domain-specific O-linked N-acetylglucosamine transferase OS=Canis familiaris GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q8BYW9|EOGT_MOUSE EGF domain-specific O-linked N-acetylglucosamine transferase OS=Mus musculus GN=Eogt PE=1 SV=1 Back     alignment and function description
>sp|Q5NDL3|EOGT_CHICK EGF domain-specific O-linked N-acetylglucosamine transferase OS=Gallus gallus GN=EOGT PE=2 SV=2 Back     alignment and function description
>sp|Q5NDE3|GTDC2_TETNG Glycosyltransferase-like domain-containing protein 2 OS=Tetraodon nigroviridis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|Q08CY9|EOGT_XENTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus tropicalis GN=eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE4|GTDC2_TAKRU Glycosyltransferase-like domain-containing protein 2 OS=Takifugu rubripes GN=gtdc2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query442
224139884444 predicted protein [Populus trichocarpa] 0.966 0.961 0.770 0.0
255585488533 glycosyltransferase, putative [Ricinus c 0.961 0.797 0.736 0.0
356504769537 PREDICTED: uncharacterized glycosyltrans 0.963 0.793 0.741 0.0
317106706530 JHL06B08.8 [Jatropha curcas] 0.963 0.803 0.743 0.0
224086964413 predicted protein [Populus trichocarpa] 0.925 0.990 0.782 0.0
356572020530 PREDICTED: uncharacterized glycosyltrans 0.963 0.803 0.738 0.0
357509679541 Glycosyltransferase [Medicago truncatula 0.963 0.787 0.705 0.0
56409840541 glycosyltransferase [Medicago truncatula 0.963 0.787 0.703 0.0
225441880529 PREDICTED: uncharacterized protein LOC10 0.970 0.810 0.702 1e-174
297739632486 unnamed protein product [Vitis vinifera] 0.900 0.818 0.692 1e-168
>gi|224139884|ref|XP_002323324.1| predicted protein [Populus trichocarpa] gi|222867954|gb|EEF05085.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/432 (77%), Positives = 382/432 (88%), Gaps = 5/432 (1%)

Query: 14  TICCDRSGIRTDVCIMKGDVRTNSASSSIFLY--KNTNGFINYVSSMVE-EKELQHEKIR 70
           TICCDRS +R+DVC+MKGDVRT+SASSSIFL+  +N N  +N VSS+V+ ++EL HEKI+
Sbjct: 15  TICCDRSSMRSDVCVMKGDVRTHSASSSIFLFTSRNNNSVMNKVSSLVDKDEELHHEKIK 74

Query: 71  PYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGI 130
           PYTRKWETSVMD+IDEL L+ K EN   NHHCDV+HDVPAVFFSTGGYTGNVYHEFNDGI
Sbjct: 75  PYTRKWETSVMDSIDELGLIAKTENSRINHHCDVMHDVPAVFFSTGGYTGNVYHEFNDGI 134

Query: 131 LPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGL 190
           LPLYITSQH KKKVVFVIL+YHNWWIMKYG+ILS LSDYP IDFSGDK+THCFPEAI GL
Sbjct: 135 LPLYITSQHFKKKVVFVILDYHNWWIMKYGNILSLLSDYPAIDFSGDKKTHCFPEAIAGL 194

Query: 191 RIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFK 250
           RIHDELTVDPSLM+ NK+ +DFRN LD+AYWPRI+ +I+ EER A++KL L   S  S K
Sbjct: 195 RIHDELTVDPSLMQENKSIVDFRNFLDRAYWPRIKSMIKGEERGAQKKLELKAHS--SKK 252

Query: 251 NVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRA 310
           N+K+V     KKPKLVILSRNGSRAITNEN LVKMAE+IGF+V+V+RP+ T+ELA+IYRA
Sbjct: 253 NLKQVHEATLKKPKLVILSRNGSRAITNENLLVKMAEEIGFRVEVMRPEPTTELARIYRA 312

Query: 311 LNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTIL 370
           LNSS+VM+GVHGAAMTHFLFMKPGSVFIQVIPLGT+WAA+ YYGEPARKLGLKYIGY IL
Sbjct: 313 LNSSEVMIGVHGAAMTHFLFMKPGSVFIQVIPLGTEWAADAYYGEPARKLGLKYIGYQIL 372

Query: 371 PRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSI 430
           PRESSLYD+YDKNDPVLRDP SV++KGWQYTK+IYLD QNVRLNL RFQ+RL+RAY YSI
Sbjct: 373 PRESSLYDKYDKNDPVLRDPRSVSDKGWQYTKSIYLDNQNVRLNLGRFQRRLLRAYRYSI 432

Query: 431 NRISQNCHHQSQ 442
            +++   H QSQ
Sbjct: 433 AKVNSRYHLQSQ 444




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585488|ref|XP_002533436.1| glycosyltransferase, putative [Ricinus communis] gi|223526710|gb|EEF28943.1| glycosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356504769|ref|XP_003521167.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|317106706|dbj|BAJ53206.1| JHL06B08.8 [Jatropha curcas] Back     alignment and taxonomy information
>gi|224086964|ref|XP_002308019.1| predicted protein [Populus trichocarpa] gi|222853995|gb|EEE91542.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356572020|ref|XP_003554168.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|357509679|ref|XP_003625128.1| Glycosyltransferase [Medicago truncatula] gi|355500143|gb|AES81346.1| Glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|56409840|emb|CAI30145.1| glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|225441880|ref|XP_002284307.1| PREDICTED: uncharacterized protein LOC100245312 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739632|emb|CBI29814.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query442
TAIR|locus:2062709500 AT2G41640 [Arabidopsis thalian 0.477 0.422 0.663 1.9e-151
TAIR|locus:2082598504 AT3G57380 [Arabidopsis thalian 0.486 0.426 0.681 1.4e-150
TAIR|locus:2076274494 AT3G10320 [Arabidopsis thalian 0.819 0.732 0.638 2.6e-127
TAIR|locus:2063793452 AT2G03370 [Arabidopsis thalian 0.380 0.371 0.438 1.2e-71
TAIR|locus:2063809455 AT2G03360 [Arabidopsis thalian 0.373 0.362 0.416 6.8e-71
TAIR|locus:2092757384 AT3G18170 [Arabidopsis thalian 0.373 0.429 0.380 6.1e-58
TAIR|locus:2092762470 AT3G18180 [Arabidopsis thalian 0.384 0.361 0.375 1e-29
UNIPROTKB|F1SFQ3527 EOGT "Uncharacterized protein" 0.305 0.256 0.288 1.7e-11
UNIPROTKB|Q5NDL9527 EOGT "EGF domain-specific O-li 0.332 0.278 0.25 4.7e-10
WB|WBGene00010386523 H12D21.10 [Caenorhabditis eleg 0.375 0.317 0.247 1.7e-07
TAIR|locus:2062709 AT2G41640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 797 (285.6 bits), Expect = 1.9e-151, Sum P(2) = 1.9e-151
 Identities = 148/223 (66%), Positives = 180/223 (80%)

Query:    13 GTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPY 72
             GTICCDR+G+R+D+C+MKGDVRTNSASSSIFL+ ++                + EKI+PY
Sbjct:    97 GTICCDRTGLRSDICVMKGDVRTNSASSSIFLFTSSTN-----------NNTKPEKIKPY 145

Query:    73 TRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILP 132
             TRKWETSVMDT+ EL+L+ K  N++++  CDV HDVPAVFFSTGGYTGNVYHEFNDGI+P
Sbjct:   146 TRKWETSVMDTVQELNLITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIP 205

Query:   133 LYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRI 192
             L+ITSQH  KKVVFVI+EYH+WW MKYGD++S+LSDYP +DF+GD RTHCF EA VGLRI
Sbjct:   206 LFITSQHYNKKVVFVIVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRI 265

Query:   193 HDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREA 235
             HDELTV+ SL+ GN+  +DFRNVLD+ Y  RI+ L Q EE EA
Sbjct:   266 HDELTVNSSLVIGNQTIVDFRNVLDRGYSHRIQSLTQ-EETEA 307


GO:0005576 "extracellular region" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:2082598 AT3G57380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076274 AT3G10320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063793 AT2G03370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063809 AT2G03360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092757 AT3G18170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092762 AT3G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFQ3 EOGT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NDL9 EOGT "EGF domain-specific O-linked N-acetylglucosamine transferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00010386 H12D21.10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query442
pfam04577206 pfam04577, DUF563, Protein of unknown function (DU 8e-16
COG4421368 COG4421, COG4421, Capsular polysaccharide biosynth 3e-04
>gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563) Back     alignment and domain information
 Score = 75.5 bits (186), Expect = 8e-16
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 260 SKKPKLVILSR--NGSRAITNENSLVKMAEDIGFQVQVVRPDRTS--ELAKIYRALNSSD 315
             KP+ V +SR   G R I NE+ L +     GF++  V P+  S  E  K++    S+ 
Sbjct: 99  KIKPRKVYISRKKAGRRRILNEDELEEALPKYGFEI--VDPETLSLEEQVKLFS---SAK 153

Query: 316 VMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYT 368
           V+VG HG+A+T+ +FM PG+  ++++P       +  +   A  LGL Y    
Sbjct: 154 VIVGPHGSALTNLIFMPPGTGVVELVPPNR---LDPSFRNLAALLGLDYYYVY 203


Family of uncharacterized proteins. Length = 206

>gnl|CDD|226845 COG4421, COG4421, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 442
KOG4698475 consensus Uncharacterized conserved protein [Funct 100.0
PF04577206 DUF563: Protein of unknown function (DUF563); Inte 99.96
COG4421368 Capsular polysaccharide biosynthesis protein [Carb 99.74
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 86.35
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 86.18
PRK14178279 bifunctional 5,10-methylene-tetrahydrofolate dehyd 84.27
>KOG4698 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=8.4e-80  Score=630.48  Aligned_cols=386  Identities=49%  Similarity=0.819  Sum_probs=356.1

Q ss_pred             CCCceeecCCCCCcceeEEeCcEEeeCCCceEEEEecCCCcccccccchhhcccccccccCCCCCCcccccCccceeEEE
Q 013451           11 FTGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLV   90 (442)
Q Consensus        11 ~~~~~~Cd~s~~r~d~C~~~gdvr~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~i~py~Rk~~~~~m~~v~e~~v~   90 (442)
                      .++.++||+++.++|+|+++||+|+|+.++|+++......         ++..+.+|+||||+||||.++|+.|+|++|.
T Consensus        82 e~~~~~C~~~g~~s~~c~~kg~~r~h~~~~~~~~~~~~~~---------~~s~~~~e~ikpy~rk~~~~vmp~vre~~l~  152 (475)
T KOG4698|consen   82 EDSSFFCDRSGTRSDFCEMKGDVRTHPDSSTVLLTLGRLL---------TFSGRLVEKIKPYTRKGETWVMPEVRELNLL  152 (475)
T ss_pred             CCceEEeeccccccchhhhcCccccCcchhhhhhhccchh---------hhccccchhcccccccccccccccccccceE
Confidence            4556999999999999999999999999999987765311         1234688999999999999999999999998


Q ss_pred             EecCCCcCCCCCceEeeccEEEEEeCCcccCchhhhhhchhhHHhhhh--hcCCeEEEEEecccchhhhhHHHHHHhhCC
Q 013451           91 VKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQ--HLKKKVVFVILEYHNWWIMKYGDILSRLSD  168 (442)
Q Consensus        91 ~~~~~~~~~~~C~~~h~~Pavvfs~~gy~~N~~H~~~D~liPlf~t~~--~~~~~v~~vi~d~~~ww~~ky~~ll~~lS~  168 (442)
                      ..  ..+...+|+++|++||+||++|||+||.||+|+|+++|||+|.+  .|+++|++++++.++||..||.+++++||+
T Consensus       153 ~~--~~~~~r~c~v~~~~pa~vfs~Gg~tgn~yhdf~d~~ipL~it~~~~~~n~ev~~li~~~~~ww~~kf~Dvv~~lSn  230 (475)
T KOG4698|consen  153 VR--PGSEIRRCDVNHEVPAIVFSTGGYTGNEYHDFNDGIIPLFITEAELRFNKEVQFLITETHSWWDMKFGDVVRQLSN  230 (475)
T ss_pred             Ec--CCcccceeeeecccchheeecCCcchhhHHHHHhhhhhhhcccchhcccccEEEEEEEcchhhhhhHHHHHHhcCC
Confidence            32  25667899999999999999999999999999999999999999  789999999999999999999999999999


Q ss_pred             CCccccCCCCcceecceeEEecccccccccCCCCCCCC--ccHHHHHHHHHHhcCccccccchhHHHHHHhhhcCCCCCC
Q 013451          169 YPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGN--KNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSD  246 (442)
Q Consensus       169 ~~iidl~~d~~~~CF~~aiVGl~~h~~l~idp~~~~~~--~s~~dF~~flr~ay~~~~~~l~~~~~~~~~~rl~~~~s~~  246 (442)
                      |++++++++..+|||.+++|||..|.++++||...+++  ++|.+|++||+.+|++++..            .  ++|  
T Consensus       231 ~~~v~~~~~~~ThcF~~~~vgL~~h~~y~v~~t~~~~~~~~s~~~fr~~l~~a~~~~i~~------------~--~~t--  294 (475)
T KOG4698|consen  231 YPVVDFDAELRTHCFKEAIVGLVSHFPYAVNPTQPPPNGTLSMLDFRNLLDKALSPRIPE------------A--NVT--  294 (475)
T ss_pred             CceEEecCCceEEEeeeeeeeeeecccccccCCcCCCccccccccHHHHHHHHhcccccc------------c--ccC--
Confidence            99999999999999999999999999999999988865  89999999999999887521            0  121  


Q ss_pred             CCCCccccccCCCCCCCEEEEEEeCCCccccCHHHHHHHHHHcCCEEEEEcCCCCCCHHHHHHHHhcCCEEEeechhhhh
Q 013451          247 PSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMT  326 (442)
Q Consensus       247 p~~~~~~~~~~~~~~~prv~ii~R~~~R~i~Ne~ev~~~l~~~Gf~v~v~~~~~~~s~~eq~~l~~~adVlVGvHGAgLt  326 (442)
                               ...+.++||+++++|.++|.|+||+||.+++++.||+|.++++++ +++.+|+++.+++|||+|+||||||
T Consensus       295 ---------~~~~~kkpri~~lsR~~~r~Ilne~el~~~~~~~gf~v~~~~~~~-t~v~~~~~i~~s~~vmiGvHGa~lt  364 (475)
T KOG4698|consen  295 ---------APEPWKKPRITILSRAGSRAILNEDELPRMLEDIGFEVSVLRPDR-TEVAKQLRITNSSDVMIGVHGAGLT  364 (475)
T ss_pred             ---------CcChhhCCceEEEecccchhhhcchhhhHHHHhCCCceEEecccc-cchhhhhheeeccceeeeccCccce
Confidence                     233556899999999999999999999999999999999999985 9999999999999999999999999


Q ss_pred             hhhccCCCcEEEEEeeCC-CCcccccchHhHHhhcCCcEEEEEeccCCCccccccCCCCCccCCCCcccccCccccc-ee
Q 013451          327 HFLFMKPGSVFIQVIPLG-TDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTK-TI  404 (442)
Q Consensus       327 N~lFm~pgs~vIEI~P~g-~~~~~~~~y~~~A~~~Gl~Y~~y~i~~~Essl~~~y~~~~~v~~dP~~~~~~gw~~~~-~~  404 (442)
                      |++|+||++.+|||.|+| .+|.+..+|..+|+.|+++|.+|+|.++||+|.++|++||+++.||.+..++||+.++ .+
T Consensus       365 h~lfl~~~~~~iqi~pcg~~~w~a~~a~~~p~k~~~l~y~~ykI~~~es~l~~~y~~d~~~v~dp~s~~~~~f~~~k~~~  444 (475)
T KOG4698|consen  365 HLLFLPPWAGVIQIYPCGDPGWAAKLARLRPAKYMTLEYAEYKIRAEESELYHKYGGDNTIVFDPISFQKKGFEETKKKV  444 (475)
T ss_pred             eEEecCCcceEEEEEECCCccchhhhhhccccceeccccceeEEeecccceeeeccCCCceecccceeccccceeeeeee
Confidence            999999999999999999 9999999999999999999999999999999999999999999999999999999987 89


Q ss_pred             ecCCCceEEehHHHHHHHHHHHHHHHHhh
Q 013451          405 YLDGQNVRLNLRRFQKRLVRAYDYSINRI  433 (442)
Q Consensus       405 yl~~Qdv~vDi~rF~~~L~~al~~~~~~~  433 (442)
                      ||..|+|++|+.||++.+.+|+...+.++
T Consensus       445 yl~~q~v~ld~nRf~~~~~~a~~~~~~~~  473 (475)
T KOG4698|consen  445 YLELQAVRLDINRFRKTLVKAYLKEITQL  473 (475)
T ss_pred             eEeEeeeehhhhhcccchhHHHHHHHHhh
Confidence            99999999999999999999999988764



>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61 Back     alignment and domain information
>COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query442
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 76/483 (15%), Positives = 151/483 (31%), Gaps = 130/483 (26%)

Query: 76  WETSVMDTIDELDLV-VKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFND--GILP 132
           +ET       + D++ V ++    N  C  V D+P    S      ++    +   G L 
Sbjct: 9   FETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLR 66

Query: 133 LYITSQHLKKKVV--FV--ILEYHNWWIM---------------KYGDILSRLSDYPPID 173
           L+ T    ++++V  FV  +L  +  ++M                Y +   RL +   + 
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV- 125

Query: 174 FSGDKRTHCFPEAIVGLRIH-DELTVDPSL----MRGN-K-----NAIDFRNVL----DQ 218
           F+  K      +  + LR    EL    ++    + G+ K     +      V      +
Sbjct: 126 FA--KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 219 AYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNG--SRAI 276
            +W  +       E        L    DP++ +    + D S   KL I S      R +
Sbjct: 184 IFWLNL-KNCNSPETVLEMLQKLLYQIDPNWTS----RSDHSSNIKLRIHSIQAELRRLL 238

Query: 277 TNE---NSL-----VKMAEDI---GFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAM 325
            ++   N L     V+ A+         +++   R  ++     A  ++ + +  H   +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 326 THF----LFMK---------PGSVFIQVIPLGTDWAAETYYGEPAR-------------- 358
           T      L +K         P  V +   P      AE+     A               
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREV-LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 359 --KLGLK----------YIGYTILPRE--------SSLYDQYDKNDPV-----LRDPSSV 393
             +  L           +   ++ P          S ++    K+D +     L   S V
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 394 NEKGWQYTKTI---YLDGQNVRLNLRRFQKRLVRAYD----YSINRISQNC--------- 437
            ++  + T +I   YL+ +    N     + +V  Y+    +  + +             
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 438 -HH 439
            HH
Sbjct: 478 GHH 480


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query442
4a5o_A286 Bifunctional protein fold; oxidoreductase, hydrola 82.94
3ngx_A276 Bifunctional protein fold; methylenetetrahydrofola 81.04
3p2o_A285 Bifunctional protein fold; structural genomics, ce 80.65
3l07_A285 Bifunctional protein fold; structural genomics, ID 80.13
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
Probab=82.94  E-value=2.8  Score=40.90  Aligned_cols=71  Identities=21%  Similarity=0.228  Sum_probs=54.8

Q ss_pred             CCCEEEEEEeCCC--ccccCHHHHHHHHHHcCCEEEEEcCCCCCCHHHHHHHHhcCCEEEeechhh-hhhhhccCCCcEE
Q 013451          261 KKPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVF  337 (442)
Q Consensus       261 ~~prv~ii~R~~~--R~i~Ne~ev~~~l~~~Gf~v~v~~~~~~~s~~eq~~l~~~adVlVGvHGAg-LtN~lFm~pgs~v  337 (442)
                      ..-++++|.|.+.  |      -+..+|...|.+|.+..-. +.++.+   .+++|||+|+.-|+. +-..=|.+||++|
T Consensus       160 ~Gk~vvVvGrs~iVG~------plA~lL~~~gAtVtv~hs~-T~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavV  229 (286)
T 4a5o_A          160 YGMDAVVVGASNIVGR------PMALELLLGGCTVTVTHRF-TRDLAD---HVSRADLVVVAAGKPGLVKGEWIKEGAIV  229 (286)
T ss_dssp             TTCEEEEECTTSTTHH------HHHHHHHHTTCEEEEECTT-CSCHHH---HHHTCSEEEECCCCTTCBCGGGSCTTCEE
T ss_pred             CCCEEEEECCCchhHH------HHHHHHHHCCCeEEEEeCC-CcCHHH---HhccCCEEEECCCCCCCCCHHHcCCCeEE
Confidence            4558899999863  4      4667788889999988643 456654   578999999998875 6666678999999


Q ss_pred             EEEe
Q 013451          338 IQVI  341 (442)
Q Consensus       338 IEI~  341 (442)
                      |-+-
T Consensus       230 IDvg  233 (286)
T 4a5o_A          230 IDVG  233 (286)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            9874



>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Back     alignment and structure
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Back     alignment and structure
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query442
d2bona1 295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 82.61
d1gdha2129 D-glycerate dehydrogenase {Hyphomicrobium methylov 80.61
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]
Probab=82.61  E-value=2.3  Score=38.23  Aligned_cols=82  Identities=13%  Similarity=0.186  Sum_probs=53.1

Q ss_pred             CEEEEEEeCCCccccCHHHHHHHHHHcCCEEEEEcCCCCCCHHHHHHHH--hcCCEEEeechhhhh----hhhccCCC--
Q 013451          263 PKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRAL--NSSDVMVGVHGAAMT----HFLFMKPG--  334 (442)
Q Consensus       263 prv~ii~R~~~R~i~Ne~ev~~~l~~~Gf~v~v~~~~~~~s~~eq~~l~--~~adVlVGvHGAgLt----N~lFm~pg--  334 (442)
                      ||.++|--.+++.=....++++.|++.|+++.+...+......+.++-+  ...|++|.+=|=|--    |.++-..+  
T Consensus         1 p~~l~i~N~~s~~~~~~~~~~~~l~~~g~~~~v~~T~~~g~a~~~~~~~~~~~~d~Ivv~GGDGTv~ev~~gl~~~~~~~   80 (295)
T d2bona1           1 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDD   80 (295)
T ss_dssp             CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHCCSSC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHHCCCEEEEEEcCCcchHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHhccCCC
Confidence            5666553333322122457888999999999887765434555555543  568999999999964    45554444  


Q ss_pred             cEEEEEeeCC
Q 013451          335 SVFIQVIPLG  344 (442)
Q Consensus       335 s~vIEI~P~g  344 (442)
                      ...|=|+|.|
T Consensus        81 ~p~lgilP~G   90 (295)
T d2bona1          81 IPALGILPLG   90 (295)
T ss_dssp             CCEEEEEECS
T ss_pred             CceEEEEECC
Confidence            2456789999



>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure