Citrus Sinensis ID: 013526
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.952 | 0.838 | 0.724 | 0.0 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | yes | no | 0.931 | 0.807 | 0.560 | 1e-137 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.950 | 0.778 | 0.544 | 1e-136 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.931 | 0.820 | 0.548 | 1e-135 | |
| P24549 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.931 | 0.820 | 0.546 | 1e-135 | |
| P00352 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.931 | 0.820 | 0.541 | 1e-135 | |
| P48644 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.931 | 0.820 | 0.548 | 1e-135 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.931 | 0.822 | 0.548 | 1e-135 | |
| Q8MI17 | 496 | Retinal dehydrogenase 1 O | yes | no | 0.931 | 0.828 | 0.555 | 1e-134 | |
| Q8HYE4 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.931 | 0.820 | 0.536 | 1e-134 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/421 (72%), Positives = 358/421 (85%), Gaps = 1/421 (0%)
Query: 22 LEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 81
E ++ KFADLIEE+ E LA L+A+D GKL K DIP A RY AGAADKIHG
Sbjct: 81 FERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHG 140
Query: 82 EVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
E LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L
Sbjct: 141 ETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLS 200
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DKVSFTGSTDVGR++MQAAA S
Sbjct: 201 ALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAAS 260
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
NLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGEICVASSRV+VQEGIYD+ +
Sbjct: 261 NLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVE 320
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHGK EGATLLTGGK IG KGY+
Sbjct: 321 KLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYF 380
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
I+PTIF +VTEDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ N
Sbjct: 381 IQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLIN 440
Query: 381 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 440
TVSRSI+AGIIW+NCYF FD DCPYGGYKMSG R+ G+++L NYLQ KSVV P+ NSPW
Sbjct: 441 TVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPW 500
Query: 441 L 441
+
Sbjct: 501 M 501
|
Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/412 (56%), Positives = 302/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADL+E LA +EA+D GKL S A + D+ T+RY AG ADKIHG
Sbjct: 93 RGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRT 152
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAEQTPL ALY
Sbjct: 153 VPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALY 212
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +AA +NLK
Sbjct: 213 MGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLK 272
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +
Sbjct: 273 RVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSI 332
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L GG P G KGY+I+P
Sbjct: 333 ERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 392
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T +
Sbjct: 393 TVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFA 452
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 453 SALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/419 (54%), Positives = 303/419 (72%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E ++L+FADL+E+H+E LA LE D GK + + +IP A RYYAG ADKIHG
Sbjct: 120 ERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGL 179
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+ Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL A
Sbjct: 180 TIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAF 239
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
Y L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++ AA SNL
Sbjct: 240 YAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNL 299
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
KPV+LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YDEF +K
Sbjct: 300 KPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKS 359
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
+A VVGDPF + QGPQ+D KQF++++ YI+ G ATL GG IG KGY+I+
Sbjct: 360 KARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQ 419
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+F+NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN V
Sbjct: 420 PTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRV 479
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
SR+++AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT + W+
Sbjct: 480 SRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/412 (54%), Positives = 303/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 MGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/412 (54%), Positives = 306/412 (74%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADL+E +LA +EAL+ GK+ + A + D+ G L+Y AG ADKIHG+
Sbjct: 85 RGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK
Sbjct: 205 LASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF K+ V
Sbjct: 265 RVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L GG G KG++++P
Sbjct: 325 ERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 445 SALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/412 (54%), Positives = 304/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 VASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L GG P G KGY+++P
Sbjct: 325 ERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITIS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/412 (54%), Positives = 303/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 MGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/412 (54%), Positives = 305/412 (74%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADL+E +LA LEA + GK+ + + + D+ G L+Y AG ADK+HG+
Sbjct: 84 RGRLLYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGWADKVHGQT 143
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REPIGV G IIPWNFP MF K+ PAL G T+IVKPAEQTPL ALY
Sbjct: 144 IPSDGDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAEQTPLTALY 203
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST VG+ + +AA SNLK
Sbjct: 204 MASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKEAAGKSNLK 263
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++TA + A G+ +++G+ CVA+SR++V+E IYDEF ++ V
Sbjct: 264 RVTLELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIYDEFVRRSV 323
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P + + QGPQ+DK+Q D+IL IE GK+EGA L GG G KGY+++P
Sbjct: 324 ERAKKYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGYFVQP 383
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT+DM IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS
Sbjct: 384 TVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTSYGLAAGVFTKDLDKAITVS 443
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG++W+NCY + CP+GG+KMSG GR+ G ++ Y ++K+V I
Sbjct: 444 SALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGIYEYTELKTVAIKI 495
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/412 (55%), Positives = 303/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE +LA +E+L+AGKL A + D+ G TLRY AG ADKI G
Sbjct: 80 RGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRT 139
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP M K+ PAL+ G T+IVKPAEQTPL AL+
Sbjct: 140 MPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALH 199
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 200 VASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLK 259
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 260 RVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 319
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+P
Sbjct: 320 ERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 379
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI TKDL+ A TVS
Sbjct: 380 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVS 439
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY + P+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 440 SALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTVTVKI 491
|
Can convert/oxidize retinaldehyde to retinoic acid. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/412 (53%), Positives = 302/412 (73%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 VASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +++G+P P QGPQ+DK+Q+D+IL IE GK+EGA L GG P G KGY+++P
Sbjct: 325 ERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ T D++ A T+S
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTNDIDKAVTIS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQAGTVWVNCYGVVTAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | ||||||
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.941 | 0.828 | 0.824 | 0.0 | |
| 255546535 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.941 | 0.828 | 0.802 | 0.0 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.950 | 0.836 | 0.797 | 0.0 | |
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.941 | 0.828 | 0.795 | 0.0 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 0.950 | 0.843 | 0.789 | 0.0 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 0.941 | 0.826 | 0.783 | 0.0 | |
| 357500461 | 502 | Aldehyde dehydrogenase [Medicago truncat | 0.941 | 0.826 | 0.814 | 0.0 | |
| 357518719 | 503 | Aldehyde dehydrogenase [Medicago truncat | 0.952 | 0.834 | 0.769 | 0.0 | |
| 356531251 | 499 | PREDICTED: aldehyde dehydrogenase family | 0.952 | 0.841 | 0.757 | 0.0 | |
| 356523743 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.941 | 0.828 | 0.778 | 0.0 |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/415 (82%), Positives = 380/415 (91%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
IM++FADLI+E+ E LA L+ +D GKL S K DIP AANTLRYYAGAADKIHGEVLKM
Sbjct: 87 IMMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPSAANTLRYYAGAADKIHGEVLKM 146
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SRALQGYTLREPIGVVGHIIPWNFP+ MFFMKV+PALAAGCT IVKPAEQTPL AL++AH
Sbjct: 147 SRALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALAAGCTTIVKPAEQTPLSALFYAH 206
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAKLAG+PDGVLNVV G+GPTAGAAIASHMDID VSFTGST+VGR+VMQAAATSNLK VS
Sbjct: 207 LAKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFTGSTEVGRKVMQAAATSNLKQVS 266
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPLLIFDD D+NTA+D+AL GIL+NKGE+CVASSRVYVQEGIYDE KKLVEKA
Sbjct: 267 LELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVASSRVYVQEGIYDEIVKKLVEKA 326
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
KAWVVGDPFDP V QGPQVDK+Q+++ILSYIEH K EGATLLTGGK + +KGYYIEPTIF
Sbjct: 327 KAWVVGDPFDPKVHQGPQVDKQQYEKILSYIEHAKGEGATLLTGGKSLFEKGYYIEPTIF 386
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
++ EDMLI K+EIFGPVM+LMKFKT+EEAIK AN+TRYGLAAGI+TKDLN+ANTV+RSI
Sbjct: 387 ADLQEDMLIVKDEIFGPVMSLMKFKTIEEAIKRANDTRYGLAAGIVTKDLNIANTVARSI 446
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAG+IW+NCYFAFD DCPYGGYK SGFGRD GLE+LH YLQVKSVVTPI+NSPWL
Sbjct: 447 RAGVIWVNCYFAFDQDCPYGGYKTSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/415 (80%), Positives = 378/415 (91%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+++FAD+IEEH E LA ++ +DAGKL + K DIP A N LRYYAGAADKIHG+VLKM
Sbjct: 87 ILMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPMAINLLRYYAGAADKIHGQVLKM 146
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SR LQGYTL EP+GVVGHIIPWNFPT MFFMKV+PALAAGCTM+VKPAEQTPL ALY+AH
Sbjct: 147 SRELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALAAGCTMVVKPAEQTPLSALYYAH 206
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAK AG+PDGV+NV+ GFGPTAGAAIASHMDIDKVSFTGST+VGR++MQAAATSNLK VS
Sbjct: 207 LAKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFTGSTEVGRKIMQAAATSNLKQVS 266
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPLLIFDD D++TA D+ALLGIL+NKGE+CVASSRVYVQEGIYDE KKL +KA
Sbjct: 267 LELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVASSRVYVQEGIYDELVKKLEKKA 326
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
K WVVGDPFDP R GPQVDK+QFD+IL YIEHGK+EGATLLTGGKP G KGYY+ PTIF
Sbjct: 327 KDWVVGDPFDPISRLGPQVDKQQFDKILYYIEHGKKEGATLLTGGKPSGNKGYYLHPTIF 386
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
T+V EDM+IAK+EIFGPVM+LMKFKT++EAI+ ANNT+YGLAAGI+TK+L+VANTVSRSI
Sbjct: 387 TDVKEDMMIAKDEIFGPVMSLMKFKTIDEAIERANNTKYGLAAGIVTKNLDVANTVSRSI 446
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAGIIWINCYF FD+DCP+GGYKMSGFGRD GL++LH YLQVKSVVTPI+NSPWL
Sbjct: 447 RAGIIWINCYFVFDNDCPFGGYKMSGFGRDLGLDALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/419 (79%), Positives = 378/419 (90%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E IM+K+ADLI+++ E +A L+A+DAGKL+ W K DIP AANT+RYYAGAADKIHGE
Sbjct: 83 ERAKIMMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDIPAAANTIRYYAGAADKIHGE 142
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
VLK SR YTL EPIGVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL AL
Sbjct: 143 VLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSAL 202
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
++AHLAKLAG+PDGVLNVVPGFG TAGAAI+SHMDIDKVSFTGST+VGR+VM+AAA SNL
Sbjct: 203 FYAHLAKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVSFTGSTEVGREVMRAAANSNL 262
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
KPVSLELGGKSP+++FDD DV+ AA +AL+GILFNKGEICVA SRV VQEGIYDEFEKKL
Sbjct: 263 KPVSLELGGKSPVIVFDDADVDKAAGLALMGILFNKGEICVAGSRVLVQEGIYDEFEKKL 322
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
VEKA AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK+EGATLLTGGK +G KGYYIE
Sbjct: 323 VEKANAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKEGATLLTGGKRVGNKGYYIE 382
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTIF+NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANNTRYGLA+GI+TK L+ ANTV
Sbjct: 383 PTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTV 442
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
SRSIRAGI+WINCYFAF D PYGGYKMSGFGRD G+E+LH YLQVKSVVTPI+NSPWL
Sbjct: 443 SRSIRAGIVWINCYFAFGDDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/415 (79%), Positives = 377/415 (90%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
IM+K+ADL++++ E +A L+A+DAGKL+ W K DIP AA+T+RYYAGAADKIHGEVLK
Sbjct: 87 IMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKA 146
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SR YTL EPIGVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL AL++AH
Sbjct: 147 SREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAH 206
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAKLAG+PDGVLNVVPGFG TAG AI+ HMDIDKVSFTGST+VGR+VM+AAA SNLKPVS
Sbjct: 207 LAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVSFTGSTEVGREVMRAAANSNLKPVS 266
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP+++FDD DV+ AA++ALLGILFNKGEICVA SRV VQEGIYDEFEKKLVEKA
Sbjct: 267 LELGGKSPVIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKA 326
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
KAWVVGDPFDP V+QGPQVDKKQF++ILSYIE GK+EGATLLTGGK +G KGYYIEPTIF
Sbjct: 327 KAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGATLLTGGKRVGNKGYYIEPTIF 386
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANNTRYGLA+GI+TK L+ ANTVSRSI
Sbjct: 387 SNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSI 446
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAGI+WINCYFAF +D PYGGYKMSGFGRD G+E+LH YLQVKSVVTPI+NSPWL
Sbjct: 447 RAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/419 (78%), Positives = 375/419 (89%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E IM+K ADLI+E+ E LA L+A+DAGKL+ K DIPGAA TLRY+AGAADKIHGE
Sbjct: 79 ERAKIMMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAADKIHGE 138
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
VLK+SR L YTL EP+GVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQTPL AL
Sbjct: 139 VLKVSRELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQTPLSAL 198
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
+ AHLAKLAG+PDGVLNVVPGFG TAGAA++SHMDID VSFTGST GR+VM+AAA+SNL
Sbjct: 199 FCAHLAKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAAASSNL 258
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K VSLELGGKSPL+IF+D D++ AA++AL GIL NKGE+CVASSRV+VQEGIYDEFEKKL
Sbjct: 259 KRVSLELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDEFEKKL 318
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
VEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G KGYYIE
Sbjct: 319 VEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNKGYYIE 378
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTIF+NV EDMLI ++EIFGPVMAL KFKTVEEAIKSANNTRYGLAAGIMTK+L++ANTV
Sbjct: 379 PTIFSNVKEDMLIVQDEIFGPVMALKKFKTVEEAIKSANNTRYGLAAGIMTKNLDIANTV 438
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
SRSIRAG +WINCYFA D+D P+GGYK SGFG+D GLE++H YLQV SVVTPI+NSPWL
Sbjct: 439 SRSIRAGSVWINCYFAIDNDIPFGGYKASGFGKDYGLEAIHKYLQVNSVVTPIYNSPWL 497
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/415 (78%), Positives = 379/415 (91%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+LK+A+LIEE+AE LA L+A+DAGKL+ + ++P AANTLRYYAGAADKIHGEVLKM
Sbjct: 88 ILLKWAELIEENAEELAALDAIDAGKLYHMCRNLEVPAAANTLRYYAGAADKIHGEVLKM 147
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SR YTL EP+GVVGHI PWNFP TMF++KV+P+LAAGCTM++KPAEQTPL AL+ AH
Sbjct: 148 SRDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFNAH 207
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVSFTGST GR++MQAAA SNLK VS
Sbjct: 208 LAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVS 267
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPL+IFDD D++ AA++ALLGIL+NKGE+CVASSRV VQEGIYDEFEKKLVEKA
Sbjct: 268 LELGGKSPLIIFDDADIDKAAELALLGILYNKGEVCVASSRVLVQEGIYDEFEKKLVEKA 327
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
KAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+EGATLLTGGK +G KGY+IEPTIF
Sbjct: 328 KAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIF 387
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+N+ EDMLIA++EIFGPVMAL KFKT+EEAIKSANNT+YGLAAGI+TK+L+ ANTVSRSI
Sbjct: 388 SNIREDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSI 447
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAG IWINCYFAF D P+GGYKMSGFG+D GLE+LH YLQVKSVVTP++NSPWL
Sbjct: 448 RAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500461|ref|XP_003620519.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355495534|gb|AES76737.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/415 (81%), Positives = 381/415 (91%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
IMLK+ADLI+++ E +A L+ +DAGKL+++ K DIPG AN +RYYAGAADKIHG+VLK
Sbjct: 88 IMLKWADLIDQNIEEIAALDTIDAGKLYTFCKAVDIPGVANIIRYYAGAADKIHGKVLKP 147
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+R L YTL EPIGVVGHIIPWNFP+TMF KV+PALAAGCTM++KPAEQTPL AL++AH
Sbjct: 148 ARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALAAGCTMVLKPAEQTPLSALFYAH 207
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAK AG+PDGVLNVVPGFG TAGAAI+SHMDIDKVSFTGST+VGR++M +AA SNLKPVS
Sbjct: 208 LAKEAGIPDGVLNVVPGFGATAGAAISSHMDIDKVSFTGSTEVGREIMVSAARSNLKPVS 267
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPLLIFDD DVN AA++ALLGILFNKGEICVA SRV+VQEGIYDEFEKKLVEKA
Sbjct: 268 LELGGKSPLLIFDDADVNKAAELALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKA 327
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
KAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK +GATLLTGGK IG KGYYIEPTIF
Sbjct: 328 KAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKNDGATLLTGGKKIGDKGYYIEPTIF 387
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+NV EDM IA++EIFGPVMALMKFKT+EEAIKSANNT+YGLAAGI+TK+L++ANTVSRSI
Sbjct: 388 SNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSI 447
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAGIIWINCYFAF +D PYGGYKMSGFGRD GLESLH YLQVKSVVTPI+NSPWL
Sbjct: 448 RAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL 502
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/420 (76%), Positives = 373/420 (88%)
Query: 22 LEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 81
+E IM+KFA+LI+E+ E LA L+A+DAGK++ K +IP AANTLRYYAGAADKIHG
Sbjct: 84 VERAKIMMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPSAANTLRYYAGAADKIHG 143
Query: 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
EVLK S YTL EPIGVVGHIIPWN PT +FF KVSP+LAAGCTM++KPAEQTPL A
Sbjct: 144 EVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLAAGCTMVLKPAEQTPLSA 203
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L++AHLAKLAG+P+GVLNVVPGFGPTAGAAI+SHMDID VSFTGS +VGR++MQAAA SN
Sbjct: 204 LFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFTGSVEVGREIMQAAAKSN 263
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK VSLELGGKSPL+IFDD D++ A ++ALLGIL NKGEICVA SRV+VQEGIYD+ EKK
Sbjct: 264 LKHVSLELGGKSPLIIFDDADIDKAVELALLGILANKGEICVACSRVFVQEGIYDQVEKK 323
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
LVEKAKAWV+GDPFDP +QGPQ D+ QF++I+SYIEHGKREGATLLTGG+ +G +GYYI
Sbjct: 324 LVEKAKAWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREGATLLTGGRRVGSQGYYI 383
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPTIF+NV EDMLIA++EIFGPVMALMKFKT+EEAIKSANNTRYGLAAGI+TK+L++ANT
Sbjct: 384 EPTIFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANT 443
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
VSRSIRAGIIWIN Y A SD P+GGYKMSGFGRD GLE+LH YLQVKS+VTPI+NSPWL
Sbjct: 444 VSRSIRAGIIWINSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPWL 503
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531251|ref|XP_003534191.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/420 (75%), Positives = 373/420 (88%)
Query: 22 LEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 81
+E IM+K+ADLI++H E +A L+A+DAGKL+ K +IP ANT+RYYAGAADKIHG
Sbjct: 80 VERARIMMKWADLIDQHVEEIAALDAIDAGKLYHMLKAIEIPATANTIRYYAGAADKIHG 139
Query: 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
EVLK +R YTL EP+GVVGHIIPWNFP+ MF KVSP LAAGCTM++KPAEQTPL A
Sbjct: 140 EVLKPAREFHAYTLLEPVGVVGHIIPWNFPSIMFVSKVSPCLAAGCTMVLKPAEQTPLSA 199
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L++AHLAKLAG+PDGVLNVVPGFG TAGAAI S MDIDKVSFTGST+VGR+VM+AAA SN
Sbjct: 200 LFYAHLAKLAGIPDGVLNVVPGFGATAGAAICSDMDIDKVSFTGSTEVGREVMRAAANSN 259
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LKPVSLELGGKSP +IFDD D++ A ++AL+ +++NKGE+C A SRV+VQEGIYDEFEK+
Sbjct: 260 LKPVSLELGGKSPFIIFDDADLDKAVELALMAVVYNKGEVCAAGSRVFVQEGIYDEFEKR 319
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
LVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G KGYYI
Sbjct: 320 LVEKAKAWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYI 379
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPTIF+NV EDMLIA++EIFGPV+ALMKFKT+EEAIKSANN+RYGL AG++TK L+ ANT
Sbjct: 380 EPTIFSNVKEDMLIAQDEIFGPVIALMKFKTIEEAIKSANNSRYGLVAGVVTKSLDTANT 439
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
+SRSIRAG++WINCYFAF++D PYGG KMSGFG+D GLE+LH YL VKSVVTPI+NSPWL
Sbjct: 440 MSRSIRAGVVWINCYFAFENDIPYGGCKMSGFGKDSGLEALHKYLHVKSVVTPIYNSPWL 499
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/415 (77%), Positives = 377/415 (90%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+LK+A++IEE+AE LA L+A+DAGKL+ + ++P AANTLRYYAGAADKIHGEVLKM
Sbjct: 87 ILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEVPAAANTLRYYAGAADKIHGEVLKM 146
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SR YTL EP+GVVGHI PWNFP TMF++KV+P+LAAGCTM++KPAEQTPL AL+ AH
Sbjct: 147 SREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFSAH 206
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVSFTGST GR +MQAAA SNLK VS
Sbjct: 207 LAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGRVIMQAAAKSNLKQVS 266
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPL+IFDD D++ A ++ALLGIL+NKGE+CVASSRV+VQEGIYDEFEKKLVEKA
Sbjct: 267 LELGGKSPLIIFDDADIDKATELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKA 326
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
KAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+EGATLLTGGK +G KGY+IEPTIF
Sbjct: 327 KAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIF 386
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+N+ EDMLIA++EIFGPVMAL KFKT EEAIKSANNT+YGLAAGI+TK+L+ ANTVSRSI
Sbjct: 387 SNIREDMLIAQDEIFGPVMALKKFKTTEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSI 446
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAG IWINCYFAF D P+GGYKMSGFG+D GLE+LH YLQVKSVVTP++NSPWL
Sbjct: 447 RAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.934 | 0.822 | 0.690 | 7.4e-153 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.931 | 0.820 | 0.516 | 6.4e-115 | |
| UNIPROTKB|P27463 | 509 | ALDH1A1 "Retinal dehydrogenase | 0.931 | 0.807 | 0.524 | 1e-114 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.931 | 0.820 | 0.509 | 1.2e-113 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.931 | 0.828 | 0.519 | 5.2e-113 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.931 | 0.820 | 0.519 | 5.2e-113 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.931 | 0.820 | 0.509 | 6.6e-113 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.941 | 0.771 | 0.506 | 6.6e-113 | |
| UNIPROTKB|P48644 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.931 | 0.820 | 0.512 | 2.9e-112 | |
| MGI|MGI:1347050 | 501 | Aldh1a7 "aldehyde dehydrogenas | 0.931 | 0.820 | 0.509 | 5.9e-112 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 285/413 (69%), Positives = 332/413 (80%)
Query: 30 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR- 88
KFAD GKL K DIP A RY AGAADKIHGE LKM+R
Sbjct: 89 KFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQ 148
Query: 89 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 148
+L GYTL+EPIGVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L AL++AHL+
Sbjct: 149 SLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLS 208
Query: 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 208
K AG+PDGVLN+V GFG TAGAAIASHMD+DKVSFTGSTDVGR++MQAAA SNLK VSLE
Sbjct: 209 KEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLE 268
Query: 209 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 268
LGGKSPLLIF+D D++ AAD+ALLG +NKGEICVASSRV+VQEGIYD+ +KLVEKAK
Sbjct: 269 LGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKD 328
Query: 269 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTN 328
W VGDPFD RQGPQVDK+QF++ILSYIEHGK EGATLLT +PTIF +
Sbjct: 329 WTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFAD 388
Query: 329 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388
VTEDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+A
Sbjct: 389 VTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKA 448
Query: 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
GIIW+NCYF FD DCPYGGYKMSG R+ G+++L NYLQ KSVV P+ NSPW+
Sbjct: 449 GIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 213/412 (51%), Positives = 287/412 (69%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GK+ + A + D+ G L+Y AG ADKIHG+
Sbjct: 85 RGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK
Sbjct: 205 LASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF K+ V
Sbjct: 265 RVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L +P
Sbjct: 325 ERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 445 SALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 216/412 (52%), Positives = 283/412 (68%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GKL S A + D+ T+RY AG ADKIHG
Sbjct: 93 RGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRT 152
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAEQTPL ALY
Sbjct: 153 VPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALY 212
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +AA +NLK
Sbjct: 213 MGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLK 272
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +
Sbjct: 273 RVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSI 332
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L +P
Sbjct: 333 ERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 392
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T +
Sbjct: 393 TVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFA 452
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 453 SALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 210/412 (50%), Positives = 287/412 (69%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GK+ + A + D+ G+ L+Y AG ADKIHG+
Sbjct: 85 RGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + +T REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK
Sbjct: 205 MASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF +K V
Sbjct: 265 RVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P + QGPQ+DK+Q D+IL IE GK+EGA L +P
Sbjct: 325 ERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 445 SALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 214/412 (51%), Positives = 284/412 (68%)
Query: 25 RG-IMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ K AD GKL S + D+ G TLRY AG ADKIHG
Sbjct: 80 RGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRT 139
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL AL+
Sbjct: 140 IPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALH 199
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 200 VASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLK 259
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 260 RVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSV 319
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L +P
Sbjct: 320 ERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQP 379
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS
Sbjct: 380 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVS 439
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY CP+GG+KMSG GR+ G L Y +VK V I
Sbjct: 440 SALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 491
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 214/412 (51%), Positives = 284/412 (68%)
Query: 25 RG-IMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ K AD GKL S + D+ G TLRY AG ADKIHG
Sbjct: 85 RGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL AL+
Sbjct: 145 IPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 VASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L +P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY CP+GG+KMSG GR+ G L Y +VK V I
Sbjct: 445 SALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 496
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 210/412 (50%), Positives = 284/412 (68%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GKL+S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 VASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L +P
Sbjct: 325 ERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITIS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 210/415 (50%), Positives = 281/415 (67%)
Query: 27 IMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++L+FAD GK + + +IP A RYYAG ADKIHG +
Sbjct: 124 VLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPA 183
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL A Y
Sbjct: 184 DGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGK 243
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++ AA SNLKPV+
Sbjct: 244 LFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVT 303
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YDEF +K +A
Sbjct: 304 LELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARA 363
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 326
VVGDPF + QGPQ+D KQF++++ YI+ G ATL +PT+F
Sbjct: 364 LKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVF 423
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN VSR++
Sbjct: 424 SNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRAL 483
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
+AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT + W+
Sbjct: 484 KAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
|
| UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 211/412 (51%), Positives = 283/412 (68%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GKL S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 MGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L +P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
|
| MGI|MGI:1347050 Aldh1a7 "aldehyde dehydrogenase family 1, subfamily A7" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 210/412 (50%), Positives = 289/412 (70%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GK+ + A + D+ + L+Y+AG ADKIHG+
Sbjct: 85 RGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REPIGV G IIPWN P +F K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPSDGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPG+GPTAG AI+SHMDIDKVSFTGST+VG+ + +AA SNLK
Sbjct: 205 MASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D+++A + A G+ F++G+ICVA+SR++V+E IYDEF ++ V
Sbjct: 265 RVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +++G+P + + QGPQ+DK+Q ++IL IE GK+EGA L +P
Sbjct: 325 ERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS
Sbjct: 385 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG++W+NCY A CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 445 SALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMQI 496
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P51647 | AL1A1_RAT | 1, ., 2, ., 1, ., 3, 6 | 0.5364 | 0.9319 | 0.8203 | yes | no |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5414 | 0.9274 | 0.8229 | N/A | no |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5036 | 0.9229 | 0.8172 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5588 | 0.9206 | 0.8169 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5536 | 0.9251 | 0.8225 | N/A | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.4814 | 0.9160 | 0.8161 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5234 | 0.9183 | 0.8148 | N/A | no |
| P00352 | AL1A1_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.5412 | 0.9319 | 0.8203 | yes | no |
| P15437 | AL1A1_HORSE | 1, ., 2, ., 1, ., 3, 6 | 0.5461 | 0.9319 | 0.822 | yes | no |
| Q56YU0 | AL2C4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7244 | 0.9523 | 0.8383 | yes | no |
| P48644 | AL1A1_BOVIN | 1, ., 2, ., 1, ., 3, 6 | 0.5485 | 0.9319 | 0.8203 | yes | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5305 | 0.9274 | 0.8163 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5485 | 0.9319 | 0.8203 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5339 | 0.9319 | 0.822 | N/A | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5330 | 0.9274 | 0.8163 | N/A | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5514 | 0.9206 | 0.8169 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5343 | 0.9206 | 0.8071 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5364 | 0.9319 | 0.8203 | N/A | no |
| O74187 | ALDH_AGABI | 1, ., 2, ., 1, ., 3 | 0.5196 | 0.9229 | 0.814 | N/A | no |
| P24549 | AL1A1_MOUSE | 1, ., 2, ., 1, ., 3, 6 | 0.5461 | 0.9319 | 0.8203 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5266 | 0.9319 | 0.7888 | yes | no |
| Q8MI17 | AL1A1_RABIT | 1, ., 2, ., 1, ., 3, 6 | 0.5558 | 0.9319 | 0.8286 | yes | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5485 | 0.9319 | 0.822 | N/A | no |
| P27463 | AL1A1_CHICK | 1, ., 2, ., 1, ., 3, 6 | 0.5606 | 0.9319 | 0.8074 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_XVIII000233 | coniferyl-aldehyde dehydrogenase (EC-1.2.1.68) (497 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.8531.4.1 | hypothetical protein (134 aa) | • | 0.899 | ||||||||
| gw1.22067.3.1 | annotation not avaliable (155 aa) | • | 0.899 | ||||||||
| Ptr4CL3 | SubName- Full=4-coumarate-CoA ligase; (541 aa) | • | 0.899 | ||||||||
| Ptr4CL4 | SubName- Full=Putative uncharacterized protein; (570 aa) | • | 0.899 | ||||||||
| f5h | SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa) | • | 0.899 | ||||||||
| SAD | SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa) | • | 0.899 | ||||||||
| ACLL14 | acyl-coa ligase (EC-6.2.1.12) (545 aa) | • | 0.899 | ||||||||
| eugene3.00071182 | SubName- Full=Ferulate 5-hydroxylase; (515 aa) | • | 0.899 | ||||||||
| Ptr4CL8 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | ||||||||
| ACLL12 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 441 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-177 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-176 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-168 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-164 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-163 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-163 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-161 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-159 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-157 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-156 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-156 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-153 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-150 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-150 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-149 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-148 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-148 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-146 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-145 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-137 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-135 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-135 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-134 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-133 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-133 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-132 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-129 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-129 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-129 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-125 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-125 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-125 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-124 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-122 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-122 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-121 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-115 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-115 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-112 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-111 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-109 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-108 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-106 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-105 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-104 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-103 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-103 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-102 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-102 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-101 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-101 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-99 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-98 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-96 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-95 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 9e-95 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 4e-94 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-90 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-89 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 3e-88 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-84 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-72 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-69 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-69 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 4e-69 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 8e-66 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-65 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 3e-64 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 9e-63 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-62 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 9e-62 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-61 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-59 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-57 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-57 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-54 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 8e-54 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-53 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-52 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-51 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 6e-51 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 7e-51 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-48 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 4e-47 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-44 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 6e-44 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 2e-43 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-42 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-39 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 4e-38 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 5e-37 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 9e-37 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 4e-30 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-26 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 6e-26 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 7e-24 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-21 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-20 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-15 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-10 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 7e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-07 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 9e-07 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 8e-05 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 6e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 0.001 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 836 bits (2161), Expect = 0.0
Identities = 346/415 (83%), Positives = 381/415 (91%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
IM+KFADLIEEH E LA L+ +DAGKL + K DIP AA LRYYAGAADKIHGE LKM
Sbjct: 87 IMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKM 146
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
SR LQGYTL+EPIGVVGHIIPWNFP+TMFFMKV+PALAAGCTM+VKPAEQTPL AL++AH
Sbjct: 147 SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAH 206
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LAKLAGVPDGV+NVV GFGPTAGAAIASHMD+DKVSFTGST+VGR++MQAAATSNLK VS
Sbjct: 207 LAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVS 266
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPLLIFDD DV+ A D+ALLGI +NKGEICVASSRVYVQEGIYDEF KKLVEKA
Sbjct: 267 LELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKA 326
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
K WVVGDPFDP RQGPQVDK+QF++ILSYIEHGKREGATLLTGGKP G KGYYIEPTIF
Sbjct: 327 KDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIF 386
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
T+VTEDM IA++EIFGPVM+LMKFKTVEEAIK ANNT+YGLAAGI+TKDL+VANTVSRSI
Sbjct: 387 TDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSI 446
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
RAG IW+NCYFAFD DCP+GGYKMSGFGRD G+++L YLQVKSVVTP++NSPWL
Sbjct: 447 RAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 672 bits (1736), Expect = 0.0
Identities = 245/409 (59%), Positives = 306/409 (74%), Gaps = 1/409 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE + LA LE+LD GK + GD+ + LRYYAG ADKI G+
Sbjct: 67 RGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT 126
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REPIGV G IIPWNFP M K++PALAAG T+++KPAEQTPL ALY
Sbjct: 127 IPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALY 186
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+N+VPGFGPTAGAAI+SHMD+DK++FTGST VGR +M+AAA SNLK
Sbjct: 187 LAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLK 246
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++FDD D++ A + A GI FN+G+ C A SR++VQE IYDEF +K
Sbjct: 247 KVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFK 306
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
+A+ VVGDPFDP QGPQV K QFD+ILSYIE GK+EGATLLTGG+ G KGY+I+P
Sbjct: 307 ARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQP 366
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+FT+V +DM IAK EIFGPV+ ++KFKT +E I+ AN+T YGLAAG+ TKD+N A VS
Sbjct: 367 TVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVS 426
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
R+++AG +W+N Y FD+ P+GG+K SGFGR+ G E L Y QVK+V
Sbjct: 427 RALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 668 bits (1724), Expect = 0.0
Identities = 252/411 (61%), Positives = 318/411 (77%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E I+L+FADL+E+HA+ LA LE D GK + A+ ++P AA RYYAG ADKIHG
Sbjct: 66 ERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGM 125
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
L YTL EPIGVVG IIPWNFP MF KV PALA G T+++KPAEQTPL AL
Sbjct: 126 TLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSAL 185
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A LA AG+PDGVLN+V GFGPTAGAAIASHMD+DKV+FTGST+VG+ +MQ AA SNL
Sbjct: 186 LAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNL 245
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
KPV+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E IYDEF +K
Sbjct: 246 KPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKA 305
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
+A VVGDPF V QGPQVDK+QF++ILSYIEHGK EGATL+TGG IG KGYYI+
Sbjct: 306 KARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQ 365
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTIF++V +DM IA++EIFGPV +++KFKTV+E IK ANN++YGLAAG+ +K+++ ANT+
Sbjct: 366 PTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTL 425
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
SR+++AG +W+NCY FD+ P+GGYKMSG GR+ G+ +L+NYLQVK+VV
Sbjct: 426 SRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 621 bits (1604), Expect = 0.0
Identities = 236/409 (57%), Positives = 293/409 (71%), Gaps = 1/409 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K ADLIE LA LE LD GK S + + D+PGA LRYYAG ADKIHG+
Sbjct: 71 RGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT 130
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP M K++PALA G T+++KPAEQTPL ALY
Sbjct: 131 IPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALY 190
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A L K AG P GV+NVVPG+GPTAGAAI+SH DIDKV+FTGST+VG+ + QAA SNLK
Sbjct: 191 LASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLK 250
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++F D D++ A + A + FN G+ C A SR +VQE IYDEF K+ V
Sbjct: 251 RVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSV 310
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK VVG+PFDP QGPQ+D++QF +IL IE GK+EGA L GGK G KGY+I+P
Sbjct: 311 ERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQP 370
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV + KFKT++E I+ ANNT YGLAA + TKD++ A T S
Sbjct: 371 TVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFS 430
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++RAG +W+NCY P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 431 NALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 585 bits (1511), Expect = 0.0
Identities = 216/406 (53%), Positives = 285/406 (70%), Gaps = 3/406 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+LK ADL+EE + LA LE L+ GK + A+ G++P A +TLRYYAG A K+ GE L
Sbjct: 56 ILLKAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPS 114
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+ YT REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A
Sbjct: 115 DPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAE 174
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L + AG+P GVLNVV G G G A+ H D+DKVSFTGST+VGR++ +AAA NLK V+
Sbjct: 175 LFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVT 233
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGK+PL++FDD D++ A + A+ G N G++C A SR+ V E IYDEF ++LVE A
Sbjct: 234 LELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAA 293
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
K+ VGDP DP GP + KKQ +R+LSYIE K EGA LL GG+ +KGY++EPT+
Sbjct: 294 KSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVL 353
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+VT DM IA+ EIFGPV++++ FK +EAI+ AN+T YGLAAG+ T DL A V+R +
Sbjct: 354 ADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRL 413
Query: 387 RAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
AG++WIN Y D + P+GG+K SGFGR+ G E L Y + K+V
Sbjct: 414 EAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 574 bits (1480), Expect = 0.0
Identities = 241/419 (57%), Positives = 308/419 (73%), Gaps = 8/419 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+L+FADL+E+H + LA LE D GK + + ++P A RYYAG ADKIHG +
Sbjct: 124 ILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPA 183
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL ALY A
Sbjct: 184 DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAK 243
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L AG+P GVLNVV GFGPTAGAA+ASHMD+DK++FTGSTD G+ V++ AA SNLKPV+
Sbjct: 244 LLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVT 303
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YDEF VEKA
Sbjct: 304 LELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF----VEKA 359
Query: 267 KA----WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
KA VVGDPF V QGPQ+D +QF++IL YI+ G GATL GG G KGYYI+
Sbjct: 360 KARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQ 419
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+F+NV +DMLIA++EIFGPV +++KFK ++E I+ ANNTRYGLAAG+ T++L+ ANT+
Sbjct: 420 PTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTL 479
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441
SR++R G +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQVK+VVTP+ N WL
Sbjct: 480 SRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 566 bits (1461), Expect = 0.0
Identities = 209/412 (50%), Positives = 283/412 (68%), Gaps = 3/412 (0%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E + ++L+ ADLIE H + LA+LE LD GK S A D+P AANT R+YA A DK++GE
Sbjct: 49 ERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGE 108
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
V REP+GVVG ++PWNFP M K++PALAAG ++++KPAEQ+PL AL
Sbjct: 109 VAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTAL 168
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A LA AG+P GVLNVVPGFG TAG A+ HMD+D ++FTGST+VGR+ ++ + SNL
Sbjct: 169 RLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNL 228
Query: 203 KPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
K V LE GGKSP ++F D D++ AA+ A GI +N+GE+C A SR+ V E I DEF +K
Sbjct: 229 KRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEK 288
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGY 319
+V A+ W GDP DPA R G V + FD++L YIE GK EGA L+ GGK + G+
Sbjct: 289 VVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGF 348
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
++EPT+F VT DM IA+ EIFGPV++++ F + EEA+ AN++ YGLAA + T DL+ A
Sbjct: 349 FVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRA 408
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ V+R +RAG +W+NC+ D P+GG+K SG GRD L +L Y ++K+
Sbjct: 409 HRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 545 bits (1407), Expect = 0.0
Identities = 210/410 (51%), Positives = 271/410 (66%), Gaps = 5/410 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
I+ K ADL+EE E LA LE L+ GK A G++ AA+T RYYAG A ++HGEV+
Sbjct: 25 ILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGEVIPS 83
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A
Sbjct: 84 PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLA 143
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L AG+P GVLNVV G G GAA+ASH +DK+SFTGST VG+ +M+AAA NLK V
Sbjct: 144 ELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRV 202
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+LELGGKSPL++FDD D++ A A+ G N G++C A+SR+ V E IYDEF ++LVE+
Sbjct: 203 TLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVER 262
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-GKKGYYIEPT 324
KA VG+P DP GP + Q DR+L+YIE K EGA LL GGK + G KGY++ PT
Sbjct: 263 VKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPT 322
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+ T+V DM IA+ EIFGPV+ ++ FK EEAI+ AN+T YGLAAG+ T+DL A V+
Sbjct: 323 VLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAE 382
Query: 385 SIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
+ AG +WIN Y P+GG K SG GR+ G L Y + K+V
Sbjct: 383 RLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 545 bits (1407), Expect = 0.0
Identities = 235/408 (57%), Positives = 294/408 (72%), Gaps = 1/408 (0%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG L K ADL+E + + LA +EALD GK AK D+ +A+T RYY G ADKIHG+V
Sbjct: 70 RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV 129
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
++ YT EPIGV G IIPWNFP M K++PALAAG T+++KP+E TPL ALY
Sbjct: 130 IETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L AG P GV+NVV G+G T G AI+SHMDIDKV+FTGST VGR+VM+AAA SNLK
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP ++FDD D+ +A GI FN G++C A SR+YVQEGIYD+F K+
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
EKAK VGDPF QGPQV + Q++RI+SYIE GK EGAT+ TGGK G +GY+IEP
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEP 369
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
TIFT+VTEDM I K EIFGPV+A++KFKT EEAIK AN++ YGLAA + T ++N A V+
Sbjct: 370 TIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVA 429
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+++AG +W+NCY P+GGYK SG GR+ G +L NY Q+K+V
Sbjct: 430 NALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 536 bits (1383), Expect = 0.0
Identities = 224/416 (53%), Positives = 290/416 (69%), Gaps = 10/416 (2%)
Query: 23 EPRGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 81
E RG +L K ADL+E++ ++LA +EALD+GK + +GD+ +RYYAG ADKI G
Sbjct: 68 EERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQG 127
Query: 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ + S YTL EP GV G IIPWN+P M K++PALAAG T+++KPAE TPL
Sbjct: 128 KTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL 187
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
LYFA+L K AG P GV+N++PG+G AG+A+A H D+DK++FTGST GR VM+AAA N
Sbjct: 188 LYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-QN 246
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK V+LE GGKSP L+F+D D++ A A GI++N G+ C A+SR+YVQE IYD+F +K
Sbjct: 247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEK 306
Query: 262 LVEKAK-AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGKK 317
VE K + VG PFD GPQV K Q+DR+LSYIE GK+EGA L+ GG K
Sbjct: 307 FVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGK 366
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
GY+I PTIFT+V +DM I K EIFGPV+ + KFKT EEAIK AN+T YGLAA + TKD+
Sbjct: 367 GYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR 426
Query: 378 VANTVSRSIRAGIIWINCYFAFDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A+ V+R + AG++WIN + DSD P+GG+KMSG GR+ G L Y Q K+V
Sbjct: 427 RAHRVARELEAGMVWINS--SNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 520 bits (1342), Expect = 0.0
Identities = 217/405 (53%), Positives = 285/405 (70%), Gaps = 1/405 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + A+LI +A+ LA LE+LD GK A+ D+P AA+T RYYAG ADKI GEV+ +
Sbjct: 46 ILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPV 105
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT+REP+GVVG I+PWNFP KV+PALAAG T+++KPAE TPL AL A
Sbjct: 106 RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAE 165
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L AG P GVLNVV GFG AGAA+ H D+DK++FTGST VGR++MQ AA NLK VS
Sbjct: 166 LMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVS 224
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKS ++F D D++ A A GI +N+G++C A SR+ V E IYDEF ++ A
Sbjct: 225 LELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLA 284
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
++ GDP DP + GP V + QFDR+L Y++ G+ EGA LLTGGK G +G+++EPTIF
Sbjct: 285 RSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIF 344
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
V +M IA+ EIFGPV+++M+F+ EEA++ AN T YGLAAG+ T+DL A+ V+ ++
Sbjct: 345 AAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAAL 404
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+AG +WIN Y FD P+GGYK SGFGR+ G E+L Y +VKSV
Sbjct: 405 KAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 195/415 (46%), Positives = 267/415 (64%), Gaps = 10/415 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKIHGE 82
RG ++ + ADLIE +AE LA LE D GKL + + A RYYAG ADKI G
Sbjct: 45 RGKLLRRLADLIEANAEELAELETRDNGKL--IRETRAQVRYLAEWYRYYAGLADKIEGA 102
Query: 83 VLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
V+ + + +T REP+GVV I PWN P + K++PALAAG T+++KP+E TP
Sbjct: 103 VIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPAST 162
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L A LA+ AG P GV+NVV GFGP G A+ H + K++FTG T+ GR + +AAA N
Sbjct: 163 LELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-EN 221
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
L PV+LELGGKSP ++FDD D++ A + + GI G+ CVA SR+ VQ IYDEF ++
Sbjct: 222 LAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVER 281
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KK 317
LV +A+A VGDP DP + GP ++Q +++ Y+ + EGA +LTGG+
Sbjct: 282 LVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGA 341
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
GY+ EPTI +VT DM IA+ E+FGPV++++ F EEAI AN++ YGLAAGI T+DL
Sbjct: 342 GYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLA 401
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
A+ V+R+I AG +W+N Y A P+GG+K SG GR+ G+E++ Y Q KSV
Sbjct: 402 RAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 503 bits (1298), Expect = e-177
Identities = 203/407 (49%), Positives = 271/407 (66%), Gaps = 6/407 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + ADL+E AE LA L L+ GK S A+ G+I AA+ +RYYA A ++ GE +
Sbjct: 63 ILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPT 121
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+ + REP+GVVG I PWNFP + K++PALAAG T+++KP+EQTPL AL A
Sbjct: 122 DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAE 181
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LA AG+P GVLNVV G G G A+ +H D+D +SFTGST VGR + AAA +NLKPV+
Sbjct: 182 LAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-ANLKPVT 240
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP ++ +D D++ A D A+ G FN G+ C A+SR+ V E +YDEF ++LV +A
Sbjct: 241 LELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARA 300
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
+ VGDP DP+ GP + ++Q DR+ YIE EGA LL GGK G GY++EPTI
Sbjct: 301 ASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTIL 358
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
VT DM IA+ EIFGPV+ +++FK EEAI+ AN+T YGLAA I T+DL A V+R +
Sbjct: 359 EGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRL 418
Query: 387 RAGIIWINCY--FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
AG++ IN Y A + P+GG K SG GR+ G L + +VK+V
Sbjct: 419 EAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 501 bits (1292), Expect = e-176
Identities = 196/409 (47%), Positives = 268/409 (65%), Gaps = 5/409 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K ADLIE A+ LA+LE+LD GK + A+ DIP AA R++A ++ GE
Sbjct: 46 ILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQ 105
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Y LR+P+GV G I PWN P + K++PALA G T+++KP+E TPL A A
Sbjct: 106 DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAE 165
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
LA AG+P GV+NVV GFGP AGAA+ +H D+D +SFTG T GR +M+AAA NLKPVS
Sbjct: 166 LANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVS 224
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGK+P ++F D D++ A D A+ N GE+C+A SR+ VQ IYDEF ++ VE+A
Sbjct: 225 LELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERA 284
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIE 322
KA VGDP DP GP + K+ +++L Y+E + EGAT+LTGG + GY++E
Sbjct: 285 KALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVE 344
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+ T + D +A+ EIFGPV+ ++ F EEAI+ AN+T YGLAA + T+DL A+ V
Sbjct: 345 PTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRV 404
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R + AG +W+NC+ D P+GG K SG GR+ G SL Y ++K+V
Sbjct: 405 ARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 480 bits (1238), Expect = e-168
Identities = 193/409 (47%), Positives = 261/409 (63%), Gaps = 6/409 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ + AD I E AE LA LE L+ GK ++ DI AN RYYAG A K GEV +
Sbjct: 64 LLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDV 122
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+ T+REP+GV G I PWN+P K++PALAAG T+++KP+E TPL +
Sbjct: 123 PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFE 182
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L + AG+P GV+N+V G G T GA +A D+D VSFTG T GR +M+AAA N+K V+
Sbjct: 183 LIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVKKVA 241
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGK+P ++F D D TA D AL G+ FN G++C A SR+ V+E I+D+F L E+A
Sbjct: 242 LELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERA 301
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGK---KGYYIE 322
K +G+ D GP V + +++LSYI+ GK EGA L+ GGK P G KGY++E
Sbjct: 302 KKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVE 361
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTIF +V M I + EIFGPV+ + +F T EEAI+ AN+T YGLA + TKD+ AN V
Sbjct: 362 PTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRV 421
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R +RAG +WIN Y + ++ P+GGYK SG GR+ G L Y + K +
Sbjct: 422 ARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 469 bits (1210), Expect = e-164
Identities = 181/406 (44%), Positives = 260/406 (64%), Gaps = 3/406 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ ++ADLI E AE LA L L+ GK + A+ G++ AA+ L ++A A +I+G +
Sbjct: 46 ILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPS 104
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ +++P+GVV I PWNFP M K++PALAAGCT+++KPAE+TPL AL A
Sbjct: 105 PAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALA 164
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA+ AG+P GVLNVV G G A+ + + K+SFTGST VG+ +M AA +K V
Sbjct: 165 ELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRV 223
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
SLELGG +P ++FDD D++ A D A+ N G+ CV ++R+YV E IYDEF +KLVE+
Sbjct: 224 SLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVER 283
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
K VG+ D GP ++++ +++ + +E +GA +LTGGK +G GY+ EPT+
Sbjct: 284 VKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTV 343
Query: 326 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385
T+VT+DMLI E FGPV ++ F T +E I AN+T YGLAA + T+DL A V+ +
Sbjct: 344 LTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEA 403
Query: 386 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ AG++ IN D++ P+GG K SG GR+ G E L YL+ K V
Sbjct: 404 LEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 468 bits (1206), Expect = e-163
Identities = 195/416 (46%), Positives = 262/416 (62%), Gaps = 9/416 (2%)
Query: 25 RGIMLK-FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--- 80
R L+ A+ + E E LA LEA D GK A D+ A YYA A+++
Sbjct: 43 RAKYLRAIAEGVRERREELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKA 101
Query: 81 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
+ + S + REP+GVVG I PWNFP M KV+PALAAGCT+++KP+E T L
Sbjct: 102 ERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSL 161
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
L A +A AG+P GVLNVV G G AGA +A+H IDK+SFTGST G QVMQAAA
Sbjct: 162 TELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA- 220
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
++KPVSLELGGKSP+++FDD D+ A + A+ G +N G+IC A+SR+ V E I D F
Sbjct: 221 QDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFL 280
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKK 317
++L A+A VGDP + VR GP V + Q++++LS+I GK EGA LL GG+ +K
Sbjct: 281 ERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEK 340
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
GY+I PT+F +V D I + EIFGPV+ + F T +EAI AN++ YGLAA ++++D
Sbjct: 341 GYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE 400
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
+ V+ ++ AGI+WINC P+GGYK SG GR+ G L NYL+VK +
Sbjct: 401 RCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 469 bits (1210), Expect = e-163
Identities = 189/409 (46%), Positives = 256/409 (62%), Gaps = 6/409 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + D++ E + LA LE LD GK + DI A+ L YYAG A + GE + +
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPL 130
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT REP+GV I WN+P + K +PALAAG MI KP+E TPL AL A
Sbjct: 131 RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAE 190
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ AG+PDGV NVV G G GA + H DI KVSFTG G++VM AAA S LK V+
Sbjct: 191 IYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS-LKEVT 248
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
+ELGGKSPL++FDD D++ AAD+A+L ++ G++C +RV+VQ+ I FE +L+E+
Sbjct: 249 MELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERV 308
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIE 322
+ +GDP DPA GP V D++L YIE GK EGA LL GG+ + G ++
Sbjct: 309 ERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVA 368
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+FT+ T+DM I + EIFGPVM+++ F +E I AN+T YGLAAG+ T DL+ A+ V
Sbjct: 369 PTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRV 428
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ AGI WIN + ++ P GGYK SG GR+ G+ +L +Y Q+KSV
Sbjct: 429 IHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 463 bits (1193), Expect = e-161
Identities = 192/414 (46%), Positives = 262/414 (63%), Gaps = 10/414 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++L+ A LI EHA+ LA LE+LD GK + A+ D+ AA YY GAADK+HGE
Sbjct: 44 RGRLLLRIARLIREHADELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGET 102
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT+REP GV GHIIPWN+P + V+PALAAG ++VKPAE PL AL
Sbjct: 103 IPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALR 162
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A LA+ AG+P G LNVV G G AGAA+ +H +D +SFTGS + G VM+AAA N+
Sbjct: 163 LAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVV 221
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
PV+LELGGKSP ++F D D+ A + + I+ N G+ C A SR+ V IYDE ++LV
Sbjct: 222 PVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLV 281
Query: 264 EKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGY 319
E+ +A VG DP + GP + KQ DR+ ++ + GA ++ GG+ GY
Sbjct: 282 ERFRALRVGPGLEDPDL--GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY 339
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
++ PT+ +V D +A+ EIFGPV+A+M F EAI AN T YGL AG+ T+D + A
Sbjct: 340 FVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRA 399
Query: 380 NTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
V+R +RAG +++N Y A + P+GG K SG GR+ GLE+L+NY Q K+V
Sbjct: 400 LRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 458 bits (1180), Expect = e-159
Identities = 201/416 (48%), Positives = 260/416 (62%), Gaps = 15/416 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K AD IEE+ E+LAV E LD GK DIP A + RY+AG G + ++
Sbjct: 65 ILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEI 124
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Y EP+GVVG IIPWNFP M K++PALAAG T+++KPA QTPL L
Sbjct: 125 DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV--- 181
Query: 147 LAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
L +L G +P GV+NVV GFG AG +ASH I K++FTGST VGR +MQ AA NL P
Sbjct: 182 LMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-ENLIP 240
Query: 205 VSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
V+LELGGKSP + FDD D + A+ LG FN+GE+C SR VQE IYDEF
Sbjct: 241 VTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFI 300
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG 315
++ VE+ +A VG+P DP G QV K Q ++ILSY++ GK EGA +LTGG+
Sbjct: 301 ERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGL 360
Query: 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
KGY+ EPT+ DM I + EIFGPV+A++ FK EEAI AN+T YGL G+ T+D
Sbjct: 361 DKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRD 420
Query: 376 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+N A V+R I+ G +W+NCY + + P+GGYK SG GR+ L +Y Q K++
Sbjct: 421 INRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNI 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 452 bits (1165), Expect = e-157
Identities = 184/413 (44%), Positives = 260/413 (62%), Gaps = 9/413 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG I+ K ADL+ E + +A LE +D GK A++ DI +A+ L YYAG A + GE
Sbjct: 43 RGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEH 101
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT REP+GV I WN+P + K +PALA G M+ KP+ TPL AL
Sbjct: 102 VPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALL 161
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A + AG+PDGV NVV G G T G + H D+ KVSFTGS G++VM AAA +K
Sbjct: 162 LAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIK 219
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSPL+IFDD D+ A + A++ ++G++C +RV+VQ I DEF ++LV
Sbjct: 220 HVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLV 279
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKG 318
E+ K +GDP D + G + ++ +++L YIE K+EGA +L GG+ + + G
Sbjct: 280 ERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENG 339
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
+Y+ P + T+ T+DM I + EIFGPVM+++ F T EE I+ AN+T YGLAAG+ T+DL
Sbjct: 340 FYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR 399
Query: 379 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A+ V ++AG WIN Y + P+GGYK SGFGR+ G +L +Y Q+K+V
Sbjct: 400 AHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 451 bits (1162), Expect = e-156
Identities = 192/414 (46%), Positives = 278/414 (67%), Gaps = 7/414 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +M + ADL+EEH E LA +E+LD+G +++ A + + T RY+AG DKI G+
Sbjct: 69 RGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKT 128
Query: 84 LKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
+ +++A T REPIGV G +IPWN+P M K++ LAAG T+++KPA+ TPL
Sbjct: 129 IPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPL 188
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
AL FA L AG P GV+N++PG G G ++ H D+ K+ FTGST +G+ +M++ A
Sbjct: 189 TALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAV 248
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
SNLK VSLELGGKSPL+IF D D++ A M + + FNKGE C+A+ R++V+E I+DEF
Sbjct: 249 SNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFV 308
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
+++VE+ K +GDP D + GPQ K D+++ Y E G +EGATL+ GGK + + G+
Sbjct: 309 RRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGF 368
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLN 377
+ EPT+FT+V + M IAK E FGP+M + KF V+ ++ AN+T YGLA+G+ TKD+N
Sbjct: 369 FFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDIN 428
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A VS + AG +++N Y D P+GG+K SGFG+D G E+L+ YL+ K+V
Sbjct: 429 KALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 449 bits (1156), Expect = e-156
Identities = 192/407 (47%), Positives = 267/407 (65%), Gaps = 4/407 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
++LK ADLI E LA++E L++GK S A G+I GAA+ RY A A +HG+
Sbjct: 48 VLLKVADLIRARRERLALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNN 106
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ + G LREPIGVVG I PWNFP + K+ ALAAGCT++VKP+E T L A
Sbjct: 107 LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLA 166
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L AG+P GV+N+V G+G T G A+ H D+D VSFTGST VG+ + AAA NLK V
Sbjct: 167 ELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKV 225
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
SLELGGK+P ++F D D++ AAD + G+ FN GE C + SR+ V E I D F +V +
Sbjct: 226 SLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVAR 285
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPT 324
++ VGDP DP + G +++ Q +I Y++ G+ EGATLL GG+ + G + +PT
Sbjct: 286 SRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPT 345
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
IFT+VT DM IA+ EIFGPV++++ F TV+EAI AN+T YGL+AG+ +KD++ A TV+R
Sbjct: 346 IFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVAR 405
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
IRAG +W+N + + P+GG+K SG GR+ G + Y ++K+V
Sbjct: 406 RIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 441 bits (1136), Expect = e-153
Identities = 174/416 (41%), Positives = 245/416 (58%), Gaps = 12/416 (2%)
Query: 22 LEPRGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 80
+E R +L + A+ E A+ LA L+ G + A+ + LR A A
Sbjct: 57 VEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF- 115
Query: 81 GEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
+ + REPIGV G I PWN+P +KV+PALAAGCT+++KP+E PL
Sbjct: 116 ----EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPL 171
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
A+ A + AG+P GV N+V G GP G A+++H D+D VSFTGST G++V +AAA
Sbjct: 172 SAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
+ +K V+LELGGKS +I DD D+ A + N G+ C A +R+ V Y E E
Sbjct: 232 T-VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAE 290
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-K 316
+ A+A+VVGDP DPA GP QFDR+ YI+ G EGA L+ GG +P G +
Sbjct: 291 EIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLE 350
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
+GY+++PT+F +VT DM IA+ EIFGPV++++ + +EAI AN+T YGLA + + D
Sbjct: 351 RGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADP 410
Query: 377 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
A V+R +RAG + IN AF+ P+GGYK SG GR+ G L +L+VKS+
Sbjct: 411 ERARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 435 bits (1120), Expect = e-150
Identities = 170/409 (41%), Positives = 244/409 (59%), Gaps = 8/409 (1%)
Query: 28 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 87
+LK AD IEE+AE LA LE+ + GK + ++PGA + R++AGAA + G
Sbjct: 47 LLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA--AG 104
Query: 88 RALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
L G+T REPIGVV I PWN+P M K++PALAAG T+++KP+E TPL L
Sbjct: 105 EYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLL 164
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
A LA +P GV+NVV G G +AG A+ +H + VS TGS G++V +AAA LK
Sbjct: 165 AELAA-EVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKR 222
Query: 205 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 264
V LELGGK+P+++FDD D++ A +N G+ C A+ RVYV E +YDEF LVE
Sbjct: 223 VHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVE 282
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 324
A VGDP D GP Q +R+ ++E A +LTGG+ GY+ EPT
Sbjct: 283 AVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEPT 341
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+ V +D I + EIFGPV+ + F +EAI+ AN+ YGLA+ + T+D+ A +S
Sbjct: 342 VVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSA 401
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
+ G +W+N + ++ P+GG+K SG+G+D + +L +Y ++K V+
Sbjct: 402 RLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 434 bits (1119), Expect = e-150
Identities = 193/416 (46%), Positives = 258/416 (62%), Gaps = 10/416 (2%)
Query: 32 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-----LKM 86
A I E LA LE LD GK A D+ A YYA A+ + + L M
Sbjct: 82 AAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPM 140
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+GY L+EP+GVVG I PWN+P M KV+PALAAGCT ++KP+E + L A
Sbjct: 141 E-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELAD 199
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ + G+P GVLNVV G G AGA +ASH +DK++FTGST GR++M AAA +KPVS
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAA-QMVKPVS 258
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP+++FDDVD++ A + A+ G + G+IC A+SR+ V E I EF +KLV+ A
Sbjct: 259 LELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWA 318
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKKGYYIEPT 324
K + DP + R GP V + Q++++L +I K EGAT+L GGK KKG++IEPT
Sbjct: 319 KNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPT 378
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
I T+VT M I + E+FGPV+ + F T +EAI+ AN++ YGLA +++ DL VS
Sbjct: 379 IITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSE 438
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 440
+ +AGI+WINC P+GG K SGFGR+ G L NYL VK V I + PW
Sbjct: 439 AFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 432 bits (1112), Expect = e-149
Identities = 194/409 (47%), Positives = 266/409 (65%), Gaps = 6/409 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K AD+I+E+ E+LA++E LD GK + DIP AA+ RY+AG G +
Sbjct: 65 ILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMI 124
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
LREPIGVVG IIPWNFP M K++PALAAG T+++KP+ T L L A
Sbjct: 125 DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAK 184
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ + +P GV+N+V G G +G + +H +DK++FTGST+VGR V AAA L P +
Sbjct: 185 IIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KKLIPAT 242
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKS +IFDD + + A + A LGILFN+G++C A SR++VQEGIYDEF KL EK
Sbjct: 243 LELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKF 302
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK----KGYYIE 322
+ VG+P DP + G QV+K Q D+ILSY++ K EGA +LTGG + + KG++IE
Sbjct: 303 ENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIE 362
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+ NVT DM +A+ EIFGPV ++KFKT +E I AN++ YGL G+ TKD+N A V
Sbjct: 363 PTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRV 422
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R++ G +W+N Y + P+GGYK SG GR+ L Y Q+K++
Sbjct: 423 ARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-148
Identities = 183/410 (44%), Positives = 259/410 (63%), Gaps = 6/410 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG I+ + ADLI E E LA LE LD GK + D+ A+ ++AG A ++GE+
Sbjct: 59 RGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEI 118
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT+REP+GV I WN+P + K++PALAAG M+ KP+E TPL AL
Sbjct: 119 IPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A + + AG+P GV NVV G G G + +H D+ KVSFTG G+++M AAA +LK
Sbjct: 179 VAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAA-GHLK 237
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V++ELGGKSPL++FDD D+ +A D A+LG F+ G++C +RV+V + I + F +LV
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 319
E+ + +GDPFD A GP + D++LSYIE GK EGATL TGG + G+
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
++EPT+F + T+DM I + EIFGPVM ++ F +E I AN+T YGLA G+ T DL A
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRA 417
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ V+ + AG +WIN Y + ++ P+GGYK SG GR+ G +L +Y +VK
Sbjct: 418 HRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 428 bits (1104), Expect = e-148
Identities = 165/413 (39%), Positives = 240/413 (58%), Gaps = 14/413 (3%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
+LK AD IEE+A+ A LE+L+ GK A +IP + R++AGAA + G
Sbjct: 65 EALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEG---- 120
Query: 86 MSRA---LQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
A L+G+T R+P+GVV I PWN+P M K++PALAAG T+++KP+E TPL
Sbjct: 121 -KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
AL A LA +P GVLNVV G G T G A+ H + VS TGS G+ V+ AAA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA- 237
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
++K LELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD+
Sbjct: 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLV 297
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKG 318
KL VGDP D GP + DR+ ++E K G ++TGG+ KG
Sbjct: 298 AKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKG 357
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
YY EPT+ +D I + E+FGPV+++ F ++A++ AN++ YGLA+ + T+D+
Sbjct: 358 YYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGR 417
Query: 379 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A+ VS ++ G W+N +F S+ P+GG K SG+G+D L L +Y V+ V
Sbjct: 418 AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 423 bits (1091), Expect = e-146
Identities = 167/413 (40%), Positives = 236/413 (57%), Gaps = 8/413 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV--- 83
+ + + +E E L L + G A+ + G LRY+A AD E
Sbjct: 47 CLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLP 106
Query: 84 LKMSRALQGYTL--REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ R G + REP+GVV I PWNFP + K++PALAAG T+++KPA TPL A
Sbjct: 107 VPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSA 166
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L + +P GV+NVV G G A+ + +D VSFTGST VGR++M AA +
Sbjct: 167 LLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-AT 225
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK V LELGGKS ++ DD D+ AA A+ + N G+ C ++R+ V YDE +
Sbjct: 226 LKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEA 285
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGY 319
L +A VGDP DP GP + Q DR+ YI G+ EGA L+TGG P G KG+
Sbjct: 286 LAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGF 345
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
Y+EPT+F +V DM IA+ EIFGPV+ ++ + +EA++ AN++ YGL+ G+ + D++ A
Sbjct: 346 YVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRA 405
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
V+R IR G + IN + D P+GGYK SG GR+ G+E L +L+ KS+
Sbjct: 406 YRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 423 bits (1089), Expect = e-145
Identities = 166/409 (40%), Positives = 239/409 (58%), Gaps = 6/409 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ + AD +E A+ LA L + G SW++ PG A LRYYA A E +
Sbjct: 65 VLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRP 124
Query: 87 SRAL-QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
REP+GVV I+PWN P + +K++PALAAGCT+++KP+ +TPL A A
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
A+ AG+P GV+NVVP G + H +DKVSFTGST GR++ L V
Sbjct: 185 EAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERLARV 242
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+LELGGKS ++ DD D++ A + L N G++CVA +R+ V YDE + L
Sbjct: 243 TLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAA 302
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGYYIEP 323
A VGDP DPA + GP +Q +R+ YI G+ EGA L+TGG P G +G+++EP
Sbjct: 303 VAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEP 362
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F +V DM IA+ EIFGPV++++ + ++A++ AN++ YGL+ + T D+ V+
Sbjct: 363 TLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVA 422
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
R IR G + +N F D P+GG+K SG GR+ G E L YL+ KS+
Sbjct: 423 RRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-137
Identities = 178/410 (43%), Positives = 249/410 (60%), Gaps = 7/410 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K D +E E LA L + GK A G++ A RYYAG A ++ GE L
Sbjct: 64 ILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGETLPS 122
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+R ++ T REP+GVVG I PWNFP + K++PALA G T++ KPAE TP A
Sbjct: 123 TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALV 182
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
+ + AG+P GV N+V G G G A+ H D+D VSFTGST VGR++ AAA + V
Sbjct: 183 EILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAARGARV 241
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
LE+GGK+PL++ DD D++ A + A+ G F+ G+ C ASSR+ V EGI+D F + LVE+
Sbjct: 242 QLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVER 301
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGYYIEP 323
KA VGD D V GP V ++Q ++ L YIE + EGA L+ GG+ + +GYY+ P
Sbjct: 302 TKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAP 361
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
+F VT DM IA+ EIFGPV A+++ + +EA+ AN+T +GL+AGI+T L A
Sbjct: 362 ALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFK 421
Query: 384 RSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 431
R + AG++ +N A D P+GG K S +G R+ G +L Y +K+V
Sbjct: 422 RRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 397 bits (1023), Expect = e-135
Identities = 178/410 (43%), Positives = 255/410 (62%), Gaps = 6/410 (1%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
+ K ADLI E+A+ LA L + GK S A++ ++ A+ + Y A A +I GE++
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIP 119
Query: 86 MSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
R + + + PIGVV I+PWNFP + K++PAL G T+++KP+E+TPL AL F
Sbjct: 120 SDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEF 179
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
A L AG+P GVLN+V G G G A+ +H + +S TGST+ G+++M+AAA N+
Sbjct: 180 AELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENITK 238
Query: 205 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 264
VSLELGGK+P ++ D D++ A + + N G++C + RVYV E IYDEF +KLVE
Sbjct: 239 VSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVE 298
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGKKGYYIEP 323
K KA VGDPFD A GP V++ D++ +E GATLLTGGK P G+KGY+ EP
Sbjct: 299 KMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEP 358
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+ TNV +DM I + EIFGPV+ ++KF +++EAI+ AN++ YGL + I T++LN A +
Sbjct: 359 TVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRAT 418
Query: 384 RSIRAGIIWINCYFAFDSDCPY-GGYKMSGFGRDCGLESLHNYLQVKSVV 432
+ G +IN F++ + G+K SG G G L YLQ K V
Sbjct: 419 NELEFGETYINR-ENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-135
Identities = 174/409 (42%), Positives = 239/409 (58%), Gaps = 6/409 (1%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E R +L AD IE +AE LA L L+ GK + A ++ GA LRY A E
Sbjct: 42 ERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD--E 98
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
V++ + R+P+GVV I+PWNFP + K++PAL AG T+++KP+ TPL L
Sbjct: 99 VIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTL 158
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
LA+ +P GVLNVV G G G A+ SH DI K+SFTGST G++VM +AA L
Sbjct: 159 KLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTL 215
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K V+LELGG ++ DVD++ A G N G++C A R+YV E IYDEF + L
Sbjct: 216 KRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEAL 275
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
V AKA VVGD DP GP +K Q+D++ +E K +GA +L GG+P+ GY+I
Sbjct: 276 VALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIP 335
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTI + E I E FGPV+ ++K+ +E I AN++ YGL A + + DL A V
Sbjct: 336 PTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAV 395
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R + AG +WIN + A D D P+GG+K SG G + G+E L Y Q + +
Sbjct: 396 ARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 393 bits (1011), Expect = e-134
Identities = 185/414 (44%), Positives = 260/414 (62%), Gaps = 11/414 (2%)
Query: 25 RGIMLK-FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R ML+ A + EHAE LA+++ALD G S A +GD+ AA L Y+AG ++ GE
Sbjct: 43 RARMLRELATRLREHAEELALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGET 101
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLIAL 142
+ + YTLREP GVV I+ +N P MF K++ LAAG T++VKP EQ PL AL
Sbjct: 102 IPVGGRNLHYTLREPYGVVARIVAFNHPL-MFAAAKIAAPLAAGNTVVVKPPEQAPLSAL 160
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A LA+ +P GV N++PG G TAGAA+ H D+ +++ GS GR +M+AAA +
Sbjct: 161 RLAELAR-EVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-I 218
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN-KGEICVASSRVYVQEGIYDEFEKK 261
K V+LELGGK+ L++F D D AAD A+ G+ F G+ C ++SR++V E IYDE +
Sbjct: 219 KHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLAR 278
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKK 317
+VE+ A VGDP DPA GP V ++Q+DR++ YI+ KREGA L+TGG P +
Sbjct: 279 VVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEG 338
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
G+Y+EPT+F +VT M IA+ EIFGPV+++++++ E + AN YGL A I T D++
Sbjct: 339 GFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A+ +R + AG +WIN P+GG K SG GR+ LE L +Y Q K+V
Sbjct: 399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-133
Identities = 180/408 (44%), Positives = 266/408 (65%), Gaps = 3/408 (0%)
Query: 25 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL 84
+ ++ K ADL+E HAE LA+LE LD GK + DIPGAA +R+YA A DK++GEV
Sbjct: 84 KAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVA 143
Query: 85 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
S +REP+GV+ I+PWNFP + K+ PALAAG ++I+KP+E++PL A+
Sbjct: 144 TTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRL 203
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
A LAK AG+PDGVLNVV GFG AG A++ H DID ++FTGST G+Q+++ A SN+K
Sbjct: 204 AGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKR 263
Query: 205 VSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V LE GGKS ++F D D+ AA GI +N+G++C+A +R+ ++E I DEF L
Sbjct: 264 VWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLK 323
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
++A+ W G P DPA G +D D + S+I G+ +G LL G+ G I P
Sbjct: 324 QQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA-AIGP 381
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
TIF +V + +++ EIFGPV+ + +F + E+A++ AN+++YGL A + T+DL+ A+ +S
Sbjct: 382 TIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMS 441
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
R ++AG +++N Y D P+GGYK SG GRD L +L + ++K++
Sbjct: 442 RRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 391 bits (1006), Expect = e-133
Identities = 177/395 (44%), Positives = 254/395 (64%), Gaps = 12/395 (3%)
Query: 32 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ 91
A I++H + AVLE+LD GK ++ DIP A ++AG A + L
Sbjct: 91 ARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL-------LDTELA 143
Query: 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151
G+ +P+GVVG I+PWNFP M K+ PALA G T+++KPAE TPL AL FA + A
Sbjct: 144 GW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200
Query: 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 211
G+P GVLN+V G + G+A+A+H +DKV+FTGST+VGR + +A A + K +SLELGG
Sbjct: 201 GLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KKLSLELGG 258
Query: 212 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 271
KSP ++FDD D+++A + + I FN+G++C A SR+ VQE + +E +KL E+ V
Sbjct: 259 KSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRV 318
Query: 272 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 331
GDP D A+ G VD Q RI +E G+ EGA + G + KG + PT+FTNV
Sbjct: 319 GDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPP 378
Query: 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391
IA+ EIFGPV+ ++ F+T +EA+ ANNT YGLAA + +++L++A V+ S++AG++
Sbjct: 379 ASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVV 438
Query: 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 426
WIN + FD+ +GGY+ SGFGR+ G E L+ YL
Sbjct: 439 WINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 388 bits (999), Expect = e-132
Identities = 164/415 (39%), Positives = 238/415 (57%), Gaps = 18/415 (4%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E I+ K A+++EE + +A ++G A ++ A LR AG + GE
Sbjct: 23 ERAAILRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRRPEGE 81
Query: 83 VL------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 136
+L K S R P+GVVG I P+NFP + V+PALA G +++KP +
Sbjct: 82 ILPSDVPGKESMVR-----RVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSR 136
Query: 137 TPL-IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 195
TP+ L A + + AG+P GVLNVVPG G G A+ H + +SFTGST VGR + +
Sbjct: 137 TPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGE 196
Query: 196 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 255
A +LK V+LELGG +PL++ DD D++ A A G ++G+IC+A+ R+ V E +Y
Sbjct: 197 LAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVY 255
Query: 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315
DEF +KLV KAKA VGDP DP GP ++++Q DR+ + +E GA LLTGG
Sbjct: 256 DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY-- 313
Query: 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
+G + +PT+ ++VT DM I + EIFGPV ++ F EEA++ AN+T YGL+A + T+D
Sbjct: 314 -EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRD 372
Query: 376 LNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
L A + + G++ IN D P+GG K SG GR G SL + + +
Sbjct: 373 LERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQ 427
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 381 bits (981), Expect = e-129
Identities = 171/416 (41%), Positives = 249/416 (59%), Gaps = 10/416 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ + AD +E +E LA L AL+ G + A+ RY+ G A ++ GE
Sbjct: 43 RGKLLARIADALEARSEELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGET 102
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
L + YT+REP+GVVG I+PWN P + +K++PAL AG T+++K AE PL L
Sbjct: 103 LPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLL 162
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A + +P GVLNV+ G+G GAA+ H D+DKV+FTGST+VG+ + +AAA L
Sbjct: 163 LAEILA-QVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLI 220
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-GEICVASSRVYVQEGIYDEFEKKL 262
PVSLELGGKSP+++F D D++ A D A+ G+ F + G+ C A SR++V E IYD F +KL
Sbjct: 221 PVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKL 280
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKP----IGKK 317
V K +GDP D A G + +KQF ++ YI+ G GAT+L GG
Sbjct: 281 VAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLAD 340
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
G++++PTIF+ V + +A+ EIFGPV+ + +K +E I AN++ YGLAA + T+DL
Sbjct: 341 GFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLG 400
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV 432
A + ++ AG + +N YGG+K SG GR+ LE L ++ Q K+V
Sbjct: 401 RALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 382 bits (982), Expect = e-129
Identities = 185/418 (44%), Positives = 244/418 (58%), Gaps = 16/418 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K AD +E + E+LAV E D GK DIP A + RY+AG G + ++
Sbjct: 65 ILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI 124
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Y EP+GVVG IIPWNFP M K++PALAAG +++KPAEQTP L
Sbjct: 125 DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV--- 181
Query: 147 LAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
L +L G +P GV+NVV GFG AG +AS I KV+FTG T GR +MQ A + N+ P
Sbjct: 182 LMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA-SENIIP 240
Query: 205 VSLELGGKSPLLIFDDVDVNTAA--DMALLGIL---FNKGEICVASSRVYVQEGIYDEFE 259
V+LELGGKSP + F DV A D AL G + N+GE+C SR +QE IYD F
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYDRFM 300
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG 315
++ +E+ KA G+P D G Q +Q ++ILSYI+ GK EGA +LTGG+
Sbjct: 301 ERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGL 360
Query: 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
G Y PT F M I + EIFGPV+A+ FK EEA++ AN+T YGL AG+ T+D
Sbjct: 361 LGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRD 419
Query: 376 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
N A + R I+AG +W NCY + + +GGYK SG GR+ L +Y Q K+++
Sbjct: 420 GNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 381 bits (979), Expect = e-129
Identities = 179/421 (42%), Positives = 253/421 (60%), Gaps = 11/421 (2%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHG 81
E + + K ADLIE+HA+ +AVLE LD G+ + + AA R++A + + G
Sbjct: 61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMDG 119
Query: 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ L YT+R P+G VG I PWN P + K++PALA G T+++KPAE +PL A
Sbjct: 120 RTYPVDTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
A +AK AG+PDGV N+V GFG AG A+ +H D+ VSFTG T G +M+ A +
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK S+ELGGKSP+++FDD D+ A D + I GE C ASSR+ VQE I ++F +K
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKK 317
LVE+ +A VG P DP GP + + ++L Y+E ++EGAT+L GG+ G+
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGED 357
Query: 318 ---GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 374
G Y+ PT+FT M IA+ EIFGPV+ ++ FK EEAI+ AN+TRYGLA + T
Sbjct: 358 LGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTN 417
Query: 375 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434
D+ A+ V+ ++ AG+IW+N P+GG K SG GR+ G S Y + K+V
Sbjct: 418 DVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477
Query: 435 I 435
+
Sbjct: 478 L 478
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-125
Identities = 163/411 (39%), Positives = 243/411 (59%), Gaps = 8/411 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+L+ ADLIE+H E LA LE L +GK ++ ++ +AN LRY+AG A KI+GE L
Sbjct: 65 ILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAP 124
Query: 87 SRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
S +T REP+GVV I+PWNF + K+ ALA GCT+++KP+E TPL
Sbjct: 125 SIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLT 184
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
L A LAK AG+PDGVLNVV G G GA + SH D+ KVSFTGS G+++ A S
Sbjct: 185 LLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GRQAAS 242
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+L V+LELGGK+ D D++ + L ++G++C A R YV +DE
Sbjct: 243 DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVT 302
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
KL + ++ VG P D +V GP ++ FD++ SY++ + EG ++ GG+ + +GY+
Sbjct: 303 KLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYF 362
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
++PT+ + D + + E FGPV++ + ++ EE I+ N+T +GL A + T +L+ A
Sbjct: 363 VQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKAL 422
Query: 381 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
I AG +W+N + D P+GG K SG GR+ G + +Y ++KSV
Sbjct: 423 RYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 371 bits (954), Expect = e-125
Identities = 161/396 (40%), Positives = 223/396 (56%), Gaps = 15/396 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + A L+EE E A AL+AGK A+ ++ A TLR A A ++ GE +
Sbjct: 48 ILERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPF 106
Query: 87 -----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
G+T+REPIGVV I P+NFP + KV PA+AAG +++KPA QTPL A
Sbjct: 107 DASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSA 166
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L A L AG+P G LNVV G G T G A+ + + +SFTGS VG + + A
Sbjct: 167 LKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--- 223
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK V+LELG + +++ D D+ A + + G N G++C++ R++V E IYDEF ++
Sbjct: 224 LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLER 283
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
V K VVGDP D GP + + + +RI ++E GA LLTGGK G +
Sbjct: 284 FVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---IL 340
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPT+ T+V DM + E+F PV++L F T++EAI AN++ YGL AG+ T DL A
Sbjct: 341 EPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK 400
Query: 382 VSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 415
+R + G + IN F D PYGG K SG GR
Sbjct: 401 AARELEVGGVMINDSSTFRVDH-MPYGGVKESGTGR 435
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 370 bits (951), Expect = e-125
Identities = 164/405 (40%), Positives = 248/405 (61%), Gaps = 4/405 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K+ +L+ E+ + LA L L+ GK AK G+I AA+ L ++A A +++G+ +
Sbjct: 46 LLRKWYNLMMENKDDLARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPS 104
Query: 87 SRALQ-GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
++ + +++P+GV I PWNFP M K ALAAGCT++VKPAEQTPL AL A
Sbjct: 105 PQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALA 164
Query: 146 HLAKLAGVPDGVLNVVPG-FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
LA+ AG+P GVLNV+ G G + + + K+SFTGST+VG+ +M+ +A S +K
Sbjct: 165 RLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKK 223
Query: 205 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 264
VS+ELGG +P ++FDD D++ A + A+ N G+ CV ++R+YV +GIYDEF KKL E
Sbjct: 224 VSMELGGNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAE 283
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 324
K VG+ D V QGP +++K +++ +I +GA ++TGGK G + EPT
Sbjct: 284 AVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPT 343
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+ +NVT DML++K E FGP+ + KF EE I AN+T GLAA ++DL+ V+
Sbjct: 344 VLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAE 403
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
++ G++ IN + P+GG K SG GR+ + YL+ K
Sbjct: 404 ALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 369 bits (949), Expect = e-124
Identities = 175/408 (42%), Positives = 251/408 (61%), Gaps = 5/408 (1%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVL 84
I+ ++ DLI + E LA L L+ GK + +G++ A+ L Y+A A +++G+++
Sbjct: 88 KILRRWYDLIIANKEDLAQLMTLEQGK--PLKEAIGEVAYGASFLEYFAEEAKRVYGDII 145
Query: 85 KMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ L++P+GVVG I PWNFP M KV PALAAGCT++VKP+E TPL AL
Sbjct: 146 PSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALA 205
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A LA AG+P GVLNVV G P G A+ + + K++FTGST VG+++M A A + +K
Sbjct: 206 AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGAAATVK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGG +P ++FDD D++ A AL N G+ CV ++R+ VQEGIYD+F +
Sbjct: 265 RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFS 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
+ + VVGD F+ V QGP +++ ++ S+++ +GA +L GGK G + EP
Sbjct: 325 KAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+ +VTEDMLI + E+FGPV L +FKT EEAI AN+T GLAA I T+DL A VS
Sbjct: 385 TVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
++ GI+ +N P+GG K SG GR+ + YL++K V
Sbjct: 445 EALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 363 bits (935), Expect = e-122
Identities = 165/410 (40%), Positives = 232/410 (56%), Gaps = 6/410 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++L+ AD E +AE LA L AL+ GK+ A +I GA + LRYYAG A G +++
Sbjct: 47 VLLELADAFEANAERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEP 105
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFA 145
LREP+GV G I+PWN P + ++PALAAGCT++VKPA QT I A
Sbjct: 106 EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIR 165
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA++ +P GV+N+ G A + + D+D +SFTGST GR +M AAA LK +
Sbjct: 166 ILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRL 224
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
LELGGK+P ++FDD D++ A + G+ C+A SRV VQ I DE +L +
Sbjct: 225 GLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAAR 284
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGK--KGYYIE 322
A VG DPA GP +D+ DR+ +E GA +L GG KG ++
Sbjct: 285 LAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLR 344
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+ D I + EIFGPV+ L F EA+ AN+T YGLAA + T+DL A V
Sbjct: 345 PTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRV 404
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+R+IRAG +WIN + ++ GGY+ SG GR G+ +L ++++ K +
Sbjct: 405 ARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-122
Identities = 160/411 (38%), Positives = 242/411 (58%), Gaps = 7/411 (1%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E I+LK A+++E A+ L L + G + A + LR AG ++ GE
Sbjct: 44 ERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGE 102
Query: 83 VLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
L ++R P+GVV I P+N+P + KV+ ALAAG T+++KP+E+TP+I
Sbjct: 103 TLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIG 162
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L A + + AG+P GV NVV G G G + + V+FTGST VGR++ + A +
Sbjct: 163 LKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RH 221
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK ++LELGGK+PL++ D D++ A A G ++G+IC+++SR+ V+E +YDEF KK
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKK 281
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
V +A VGDP DP GP + +Q +RI +E +GA LLTGGK G +
Sbjct: 282 FVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---YDGNFY 338
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
+PT+ T+VT DM I + E FGPV +++ K EEA++ AN+T YGL+A I+T DL A
Sbjct: 339 QPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFK 398
Query: 382 VSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
++ + +G++ IN D + P+GG K SGFGR+ G S+ + ++K +
Sbjct: 399 LAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 361 bits (929), Expect = e-121
Identities = 176/418 (42%), Positives = 256/418 (61%), Gaps = 21/418 (5%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-- 84
+ + A+L+++ E LA L + GK + + GD+ A + +Y AG ++ GE +
Sbjct: 64 YLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPS 122
Query: 85 ----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
K + T R+PIGVV I PWNFP + K+ PAL G T++ KPAE TP
Sbjct: 123 ELPNKDA-----MTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
AL L AG+P GV+NVV G G G A+ H D+D VSFTGST+VG ++ + A
Sbjct: 178 ALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARP 237
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
N K V+LE+GGK+P+++ DD D++ A + AL G+ C A+SR+ V E +YDEF K
Sbjct: 238 N-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLK 296
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GK 316
+ VE+AK VGD D GP +++ Q +++L+Y E GK EGATLL GG+ + +
Sbjct: 297 RFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYE 356
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
KGY++EPT+FT+VT DM IA+ EIFGPV+AL++ ++EEAI+ AN+T YGL++ I T+D+
Sbjct: 357 KGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDV 416
Query: 377 NVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 431
N A R + AGI ++N A + P+GG K SG G R+ G +L + + K+V
Sbjct: 417 NKAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-115
Identities = 155/419 (36%), Positives = 223/419 (53%), Gaps = 18/419 (4%)
Query: 25 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG-DIPGAANTLRYYAGAADKI---- 79
+L++ + +HA+ LA L + GK A G ++ A + + A A ++
Sbjct: 43 AQRLLRWKRALADHADELAELLHAETGK--PRADAGLEVLLALEAIDWAARNAPRVLAPR 100
Query: 80 ---HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 136
G ++ +A Y P GVVG I PWN+P + PALAAG +++KP+E
Sbjct: 101 KVPTGLLMPNKKATVEY---RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157
Query: 137 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 196
TPL+ A AG P GVL VV G G T A I + +DKV+FTGS GR+VM A
Sbjct: 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA--GVDKVAFTGSVATGRKVMAA 215
Query: 197 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 256
AA L PV LELGGK P+++ D D+ AA A+ G + N G+ C++ RVYV E +YD
Sbjct: 216 AA-ERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYD 274
Query: 257 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316
EF +LV KA+A G GP +Q D + +++ +GA LTGG
Sbjct: 275 EFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNG 334
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
G + EPT+ T+V DM + + E FGPV+ +M +EAI AN++RYGL+A + ++DL
Sbjct: 335 GGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394
Query: 377 NVANTVSRSIRAGIIWINC--YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
A ++R + AG + IN A P+GG K SG GR G E L + + K++
Sbjct: 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 346 bits (890), Expect = e-115
Identities = 163/416 (39%), Positives = 231/416 (55%), Gaps = 13/416 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ AD IE + E D GK S A DIP A R +A E +M
Sbjct: 64 LLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEM 123
Query: 87 -----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
AL Y +R+P+GVVG I PWN P + KV PALA G T++VKP+E+TP A
Sbjct: 124 ATPDGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTA 182
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
+ GVP GV NVV GFGP +AG + H +D ++FTG T G +M+AAA
Sbjct: 183 TLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADG 242
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+KPVS ELGGK+ ++F D D + A L N G++C+ + RVYV+ I+D F
Sbjct: 243 -VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVA 301
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-----KPIG 315
L +A++ +G P DPA GP + + D++LSY EGAT++TGG
Sbjct: 302 ALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDAL 361
Query: 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
G +++PTI+T + + + EIFGP + F + EE I AN+T YGLAA + T+D
Sbjct: 362 AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTED 421
Query: 376 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
L+ A+ V+R + GI+W+N +F D P+GG K+SG GR+ G+ SL Y ++ +V
Sbjct: 422 LSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-112
Identities = 156/414 (37%), Positives = 216/414 (52%), Gaps = 5/414 (1%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA-GAADKI 79
F E ++ K ADL+ E + LA L L+ GK + A+ ++ A RYYA A +
Sbjct: 20 FAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFL 78
Query: 80 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
E ++ + A + Y EP+GVV I+PWNFP F +P L AG T+++K A P
Sbjct: 79 ADEPIE-TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPG 137
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
AL L + AG P+GV + A IA + V+ TGS GR V A
Sbjct: 138 CALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPR-VRGVTLTGSERAGRAVAAEAG- 195
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
NLK LELGG P ++ DD D++ A A+ G L N G+ C+A+ R V E +YDEF
Sbjct: 196 KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFL 255
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
+K VE A VGDP D GP K D + +E GATLL GGK G
Sbjct: 256 EKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGA 315
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
+ PT+ T+VT M E+FGPV A++K K EEAI AN++ +GL + T DL A
Sbjct: 316 FYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERA 375
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
V+R + AG+++IN D P+GG K SG+GR+ G + ++ +K+V
Sbjct: 376 ERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-111
Identities = 159/421 (37%), Positives = 236/421 (56%), Gaps = 22/421 (5%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVL 84
++L+ A L+ LA L+ GK +WA+ D+ A + L YYA ++ G +
Sbjct: 95 RLLLRAAALLRRRRFELAAWMVLEVGK--NWAEADADVAEAIDFLEYYAREMLRLRGFPV 152
Query: 85 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
+M + P+GV I PWNFP + + AL G T+++KPAE TP+IA
Sbjct: 153 EMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKL 212
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT----- 199
+ + AG+P GV+N +PG G G + H D+ ++FTGS +VG ++ + AA
Sbjct: 213 VEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQ 272
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---FN-KGEICVASSRVYVQEGIY 255
LK V E+GGK+ +++ +D D+ D A GI+ F +G+ C A SRV V E +Y
Sbjct: 273 KWLKRVIAEMGGKNAIIVDEDADL----DEAAEGIVRSAFGFQGQKCSACSRVIVHESVY 328
Query: 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315
DEF ++LVE+ KA VGDP DP V GP +DK DRI YIE GK EG LL GG+ +
Sbjct: 329 DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLE 387
Query: 316 --KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 373
+GY+++PTIF +V D +A+ EIFGPV+A++K K +EA++ AN+T YGL G+ +
Sbjct: 388 LAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFS 447
Query: 374 KDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKS 430
+ R G ++ N A P+GG+KMSG G + G + L ++Q K+
Sbjct: 448 RSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKT 507
Query: 431 V 431
V
Sbjct: 508 V 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-109
Identities = 152/397 (38%), Positives = 232/397 (58%), Gaps = 12/397 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I++K A+LIE E LA L ++ GK ++ ++ + A A + GE + +
Sbjct: 48 ILMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPV 106
Query: 87 SRALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+T+REPIGVVG I P+NFP +F K++PA+A G +++VKP+ TPL A
Sbjct: 107 DAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTA 166
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
+ A + + AG+P GV+NVV G+G G I ++ ++ +SFTGST VG + A +
Sbjct: 167 IELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGT- 225
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
K V+LELGG P+++ D D+ A +A+ G N G++C A R+ V+E +YD+F K
Sbjct: 226 GKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKL 285
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
LVEK K VGDP D + GP + + +R+ + + +G +L GGK +G +
Sbjct: 286 LVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK--RDEGSFF 343
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ N T DM++ K E+FGPV+ + K K EEA++ AN+T YGL A + T D+N A
Sbjct: 344 PPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALK 403
Query: 382 VSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRD 416
V+R + AG + IN F +D+ P+GG+K SG GR+
Sbjct: 404 VARELEAGGVVINDSTRFRWDN-LPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 326 bits (837), Expect = e-108
Identities = 150/415 (36%), Positives = 222/415 (53%), Gaps = 13/415 (3%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E R I+LK ADL+E + + G +WA ++ AA LR A +I G
Sbjct: 23 ERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQIIGG 81
Query: 83 VLKMSRALQ-GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ + ++EP+GVV I PWN P + ++ LAAG T+++K +E +P
Sbjct: 82 SIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTH 141
Query: 142 LYFAHLAKLAGVPDGVLNVV---PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198
+ AG+P GVLNVV P P A+ +H + KV+FTGST VGR + + AA
Sbjct: 142 WLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA 201
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
+LKPV LELGGK+P ++ +D D++ AA+ AL G N G+IC+++ R+ V E I DEF
Sbjct: 202 -KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEF 260
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP-IGKK 317
+KL A+ G V G V DR+ ++ +GA L+ GG
Sbjct: 261 VEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPS 315
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
G + PTI NVT DM I E FGPV+++++ K EEA++ AN++ YGL+A + T+DL
Sbjct: 316 GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLA 375
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A V++ I +G + IN D P+GG K SG+GR G + + + K +
Sbjct: 376 RALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 323 bits (829), Expect = e-106
Identities = 159/401 (39%), Positives = 224/401 (55%), Gaps = 18/401 (4%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E I+ K A ++EE + + ++G A + A R A ++ G
Sbjct: 55 ERAEILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGR 113
Query: 83 VL------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 136
+L K +R REP+GVVG I PWNFP + V+PALA G +++KPA
Sbjct: 114 ILPSDVPGKENR-----VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASD 168
Query: 137 TPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 195
TP+ L A + + AG+P GVLNVV G G G A H +SFTGST VGR + +
Sbjct: 169 TPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGE 228
Query: 196 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 255
A +LK V+LELGG +P ++ +D D++ A + A+ G ++G+IC+A +R+ V E +Y
Sbjct: 229 LAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY 287
Query: 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315
DEF +K VE+ KA GDP DP GP +++ Q D +L IE EGATLL GG+
Sbjct: 288 DEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA-- 345
Query: 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
+G +EPT+ ++VT DM IA+ EIFGPV ++K EEA++ AN+T YGL+ + T D
Sbjct: 346 -EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSD 404
Query: 376 LNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGR 415
L +R I AG+ IN D P+GG K SG GR
Sbjct: 405 LERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 320 bits (823), Expect = e-105
Identities = 138/425 (32%), Positives = 215/425 (50%), Gaps = 40/425 (9%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG I+ + + + + E L L +L+ GK+ G++ + Y G + ++G
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT 117
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+ R + P+GVVG I +NFP + + AL G T++ KP+E TPL A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 143 ----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198
A + + G+P GV+N+V G G G + + VSFTGST+VGR+V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
V LELGG + +++ DD D++ A L + G+ C + R+ V E +YDEF
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GK 316
++LV+ K +GDP D GP +++ ++ L+ IE K +G T+LTGGK I G+
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
G Y+EPTI T VT+D I + E F P++ ++KF ++EEAI N+ GL++ I T+DL
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDL 415
Query: 377 NVANTVSRSIRAGIIWINCYFAFDSDC----------------PYGGYKMSGFGRDCGLE 420
A W+ SDC +GG K +G GR+ G +
Sbjct: 416 REAFR----------WLG---PKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSD 462
Query: 421 SLHNY 425
+ Y
Sbjct: 463 AWKQY 467
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = e-104
Identities = 161/428 (37%), Positives = 236/428 (55%), Gaps = 27/428 (6%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADK 78
E ++L+F DL+ E+ E L L L+ GK H++ ++ D+ A T RYYA A K
Sbjct: 75 VRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEVLDV---ALTARYYARRAPK 131
Query: 79 IHGEVLKMSR---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 131
+ L R AL T LR+P GVVG I PWN+P T+ PAL AG +++
Sbjct: 132 L----LAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 187
Query: 132 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
KP QTPL AL L AG+P + VV G GP G A+ + D + FTGST GR
Sbjct: 188 KPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGR 245
Query: 192 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 251
+ + A L SLELGGK+P+++ DD D++ AA A+ N G++C++ R+YV
Sbjct: 246 VLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVH 304
Query: 252 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311
E IYDEF + V +A +G +D + G + + Q + + ++++ +GAT+L GG
Sbjct: 305 ESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGG 364
Query: 312 KP---IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 368
K +G + EPT+ T VT DM +A+ E FGPV+++ V+EA++ AN+T YGL
Sbjct: 365 KARPDLGP--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLN 422
Query: 369 AGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDS-DCPYGGYKMSGFGRDCGLESLHNY 425
A + T D ++ IRAG + +N + A+ S D P GG K SG GR G E L Y
Sbjct: 423 ASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKY 482
Query: 426 LQVKSVVT 433
+ +++ T
Sbjct: 483 TESQTIAT 490
|
Length = 524 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 313 bits (805), Expect = e-103
Identities = 158/426 (37%), Positives = 230/426 (53%), Gaps = 23/426 (5%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADK 78
F E + L+F DL+ E + L L L+ GK H++ ++ D A RYYA A++
Sbjct: 39 FAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVLD---VAIVARYYARRAER 95
Query: 79 IHGEVLKMSR---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 131
+LK R A+ T R P GVVG I PWN+P T+ PAL AG +++
Sbjct: 96 ----LLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 151
Query: 132 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
KP QT L AL+ L AG+P + VV G G G AI + D V FTGST GR
Sbjct: 152 KPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGR 209
Query: 192 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 251
V + A L SLELGGK+P+++ +D D++ AA A+ N G++CV+ R+YV
Sbjct: 210 VVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVH 268
Query: 252 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311
E +YDEF ++ V + +A +G D G + + Q DR+ ++++ +GAT+L GG
Sbjct: 269 ESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGG 328
Query: 312 KPIGKKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 370
+ G Y+ EPT+ T VTEDM + E FGPV+++ + +EAI+ AN+T YGL A
Sbjct: 329 RARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNAS 388
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAF---DSDCPYGGYKMSGFGRDCGLESLHNYLQ 427
+ T+D ++ +RAG + +N +A D P GG K SG GR G E L Y +
Sbjct: 389 VWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTE 448
Query: 428 VKSVVT 433
++V
Sbjct: 449 TQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-103
Identities = 156/432 (36%), Positives = 240/432 (55%), Gaps = 18/432 (4%)
Query: 7 RQHVRRLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAA 66
RR + H E I+ + ADL+++ AE A + A + GK A+ ++ A
Sbjct: 33 GAENRRALPPH-----ERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAI 86
Query: 67 NTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 121
+TLR A A++I GE + + S +T+REP+GVV I P+NFP + K++P
Sbjct: 87 DTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAP 146
Query: 122 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 181
A+A GC +++KPA +TPL AL A + AGVP+GVL VV G G A A+ + +
Sbjct: 147 AIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAML 206
Query: 182 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEI 241
SFTGS VG + A K ++LELGG +P+++ D D++ A + G ++ G++
Sbjct: 207 SFTGSAAVGEALRANAG---GKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQV 263
Query: 242 CVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 301
C++ R+YV E +YDEF + V K VGDP D GP + ++ +R+ ++E
Sbjct: 264 CISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAV 323
Query: 302 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 361
GA LL GG+ G +PT+ +V D ++ E FGPV+ ++++ EEAI+ AN
Sbjct: 324 EAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380
Query: 362 NTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLE 420
+T YGL AGI T+DLNVA + + G + +N AF +D P+GG K SG GR+
Sbjct: 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPY 440
Query: 421 SLHNYLQVKSVV 432
++ + K+VV
Sbjct: 441 AMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 313 bits (804), Expect = e-102
Identities = 159/408 (38%), Positives = 240/408 (58%), Gaps = 3/408 (0%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E I+ ++ +L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+
Sbjct: 71 ERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGD 129
Query: 83 VLKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP A
Sbjct: 130 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 189
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L A LA AG+P GV NVV G G + S+ + K+SFTGST++GRQ+M+ A +
Sbjct: 190 LALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KD 248
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +K
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
L + +GD + V GP +D+K ++ +I +GA ++ GGK G +
Sbjct: 309 LQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFF 368
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
+PTI +V + +AK E FGP+ L +FK + I AN+T +GLAA +DL+
Sbjct: 369 QPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 428
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
V ++ GI+ IN + P+GG K SG GR+ + +YL++K
Sbjct: 429 VGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = e-102
Identities = 126/238 (52%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
I+ K ADL+EE E LA LE L+ GK A G++ A +T RY AG ADK+ G L
Sbjct: 21 ILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPS 79
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ Y REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A
Sbjct: 80 PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALA 139
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L + AG+P GV+NVVPG G GAA+ SH +DK+SFTGST VG+ +M+AAA NLKPV
Sbjct: 140 ELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPV 198
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
+LELGGKSP+++ +D D++ A + A+ G FN G+IC A+SR+ V E IYDEF +KLV
Sbjct: 199 TLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV 256
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 309 bits (794), Expect = e-101
Identities = 151/409 (36%), Positives = 224/409 (54%), Gaps = 19/409 (4%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ + ADL+EEHA+ +A ++G + A ++ A L AG + GE+L
Sbjct: 40 VLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIGELHEAAGLPTQPQGEILPS 98
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP-----LIA 141
+ R P+GVVG I P+NFP + V+PALA G +++KP +TP +IA
Sbjct: 99 APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIA 158
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
F AG+P GVL+V+PG G AG A+ ++ +SFTGST VGR+V +AA +
Sbjct: 159 RLFE----EAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RH 212
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
LK VSLELGGK+ L++ DD D++ AA G ++G+IC+A+ R V E + D + K
Sbjct: 213 LKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAK 272
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
L KAK VGDP V GP ++ +Q DR+ + ++ GA L GG G +
Sbjct: 273 LAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT---YDGLFY 329
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ + V M EIFGPV + F + EEA+ AN+T YGL+AGI+++D+ A
Sbjct: 330 RPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMA 389
Query: 382 VSRSIRAGIIWINCYFAFDSDC--PYGGYKMSGFG-RDCGLESLHNYLQ 427
++ +R G++ IN D + P+GG SG G R G + + Q
Sbjct: 390 LADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQ 437
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 308 bits (790), Expect = e-101
Identities = 145/400 (36%), Positives = 211/400 (52%), Gaps = 16/400 (4%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
I+L +EE E LA L+AGK A+ G++ A +T R A A +I+GE
Sbjct: 44 RRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGE 102
Query: 83 VLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 137
VL + QG R PIG V I P+NFP + KV+PA+AAGC ++KPA +T
Sbjct: 103 VLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRT 162
Query: 138 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI-ASHMDIDKVSFTGSTDVGRQVMQA 196
PL AL + G+P G +V+P A + + I +SFTGS VG +
Sbjct: 163 PLSALILGEVLAETGLPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKAR 220
Query: 197 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 256
A K V LELGG + +++ D D++ AA + G + G+ C++ RV V +YD
Sbjct: 221 AGK---KKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYD 277
Query: 257 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316
EF+ +LV + KA GDP D A GP + + + +R+ ++ GA LLTGGK +
Sbjct: 278 EFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK---R 334
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
G +EPTI +V DM + E+FGPV+ + + +EA+ + N++++GL AG+ T+DL
Sbjct: 335 DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL 394
Query: 377 NVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGR 415
A + G + IN F D PYGG K SG GR
Sbjct: 395 EKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR 434
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 305 bits (781), Expect = 2e-99
Identities = 151/409 (36%), Positives = 232/409 (56%), Gaps = 8/409 (1%)
Query: 28 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 87
+LK AD+IEE+A+V A LE+ + GK +IP + R++AGAA + G L
Sbjct: 66 LLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG--LAAG 123
Query: 88 RALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
A LAK P GV+N++ G G T G + H + VS TGS G ++ A S +K
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS-IKR 241
Query: 205 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 264
+ELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD +KL
Sbjct: 242 THMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGA 301
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEP 323
G P D + GP +R++ +E K G ++TGG+ GYY P
Sbjct: 302 AVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAP 361
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ +S
Sbjct: 362 TLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLS 421
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ ++
Sbjct: 422 ARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 300 bits (771), Expect = 1e-98
Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 14/411 (3%)
Query: 28 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 87
+ K A I E A ++ L + GK+ A++ ++ A+ + Y A A + GE+++
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59
Query: 88 RALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
R + + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ FA
Sbjct: 60 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ G+P GV N+V G G T G +A + + VS TGS G ++M AAA N+ V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA-KNITKVC 178
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGK+P ++ DD D++ A + + N G++C + RVYVQ+GIYD+F +L E
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238
Query: 267 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
+A G+P + + GP ++ +R+ + EGA + GGK + KGYY PT+
Sbjct: 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTL 298
Query: 326 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385
+V ++M I E FGPV+ ++ F T+EEAI AN++ YGL + I T++LNVA +
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKG 358
Query: 386 IRAGIIWIN-----CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
++ G +IN F + G++ SG G G LH YLQ + V
Sbjct: 359 LKFGETYINRENFEAMQGF-----HAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 2e-96
Identities = 149/414 (35%), Positives = 226/414 (54%), Gaps = 14/414 (3%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
I+ K A L+E E A L L++G ++ AA+ LR+ A A + GE
Sbjct: 44 AILNKAAALLEARREEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFS 102
Query: 86 M-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
+A + +TLREP+GVV I P+N P K++PA+AA +++KP+E+TPL
Sbjct: 103 CDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS 162
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
A+Y A L AG+P +L+VV G G + +H D+D V+FTG VG+ + AAT+
Sbjct: 163 AIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATA 219
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
K LELGG PL++ DD D+ AA +A+ G N G+ C A R+ V E + DEF
Sbjct: 220 GYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVD 279
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
LVEK+ A VVGDP DPA G +D++ +I + +E +GA +L G ++G
Sbjct: 280 LLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGAL 336
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
PT+ +V D + E FGPV +++ K ++EAI +N+T YGL++G+ T DL+
Sbjct: 337 YAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIK 396
Query: 381 TVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 432
+ + G + +N F S+ P+GG K SG G ++ E++ VK+
Sbjct: 397 RLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 294 bits (755), Expect = 1e-95
Identities = 146/422 (34%), Positives = 206/422 (48%), Gaps = 22/422 (5%)
Query: 22 LEPRGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 80
LE R ++ + +L+ + + +A G+ + A G+I G RY A+
Sbjct: 39 LEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGMLERARYMISIAE--- 94
Query: 81 GEVLKMSRA-----LQGYTLREPIGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVK 132
E L R + Y REP+GVV I PWN+P + V+ PAL AG +I+K
Sbjct: 95 -EALADIRVPEKDGFERYIRREPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILK 150
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
+ QTPL FA AG+P+GV V+ T+ A IA ID VSFTGS GR
Sbjct: 151 HSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRA 209
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+ +AAA V LELGGK P + D D++ AA+ + G FN G+ C + R+YV E
Sbjct: 210 IQRAAA-GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHE 268
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312
IYD F + V K + +GDP DP+ GP V + D + + I +GA L G
Sbjct: 269 SIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGA 328
Query: 313 --PIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
P K G Y+ PT+ TNV M + + E FGPV+ +MK K+ EAI N++ YGL A
Sbjct: 329 LFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTA 388
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKD+ A + + G +++N D + G K SG G + K
Sbjct: 389 SVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPK 448
Query: 430 SV 431
S
Sbjct: 449 SY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 292 bits (751), Expect = 9e-95
Identities = 142/415 (34%), Positives = 213/415 (51%), Gaps = 16/415 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ KFADL++E+ E +A L + GK A + ++ + +R ++ G+ L
Sbjct: 66 CLHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRLDGDSLPG 124
Query: 87 -----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
++ REP+GVV I P+N+P + K+ PAL G T++ KPA Q L+
Sbjct: 125 DWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLG 184
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
+ A AG P GV+NVV G G G + +H ID +SFTGST+VG ++ +
Sbjct: 185 IPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--- 241
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K + LELGGK P ++ D D+ AA + G L G+ C A RV V E + DE +
Sbjct: 242 MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVEL 301
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
L E+ VG P+D V P +D K D + I+ +GAT+L GG + G I
Sbjct: 302 LKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG--REGGNLI 359
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ VT DM +A E FGPV+ +++ +EEAI+ AN + YGL A I TKD+N A
Sbjct: 360 YPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARK 419
Query: 382 VSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++ ++ G + IN D P+ G K SG G + + + L+ + I
Sbjct: 420 LADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT----QGIGDALRSMTRRKGI 470
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 4e-94
Identities = 155/423 (36%), Positives = 221/423 (52%), Gaps = 27/423 (6%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
+M KF L+EE+ + LA L L+ GK + A+ GD+ + + + GE L+
Sbjct: 65 VMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLEN 123
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
++R + Y+ R+P+GVV I P+NFP + A+A G T ++KP+E+ P A+ A
Sbjct: 124 VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLA 183
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L + AG+PDGVLNVV G G A A+ H DI VSF GST VG + A +N K V
Sbjct: 184 ELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYI-YERAAANGKRV 241
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVE 264
G K+ ++ D D+ A+ AL+G F G+ C+A S DE+ KLVE
Sbjct: 242 QALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVE 300
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYY 320
+AK VG DP GP + +RI IE G EGA L+ G+ P + G +
Sbjct: 301 RAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNF 360
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
+ PTI NVT DM I K EIFGPV+++++ T++EAI N YG A I T+ A
Sbjct: 361 VGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAAR 420
Query: 381 TVSRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFGRDC---GLESLHNYLQVKS 430
R + AG++ IN +F+F GG+K S FG D G + + Y Q K+
Sbjct: 421 KFQREVDAGMVGINVPIPVPLAFFSF------GGWKGSFFG-DLHFYGKDGVRFYTQTKT 473
Query: 431 VVT 433
V +
Sbjct: 474 VTS 476
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 282 bits (723), Expect = 1e-90
Identities = 147/437 (33%), Positives = 216/437 (49%), Gaps = 36/437 (8%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 80
F E R ++ I E+ E + + D GK A +G+I +R+ H
Sbjct: 39 FAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----H 93
Query: 81 GEVLKMSRALQ--------------GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 126
GE +AL+ EP+GVVG I+ WN+P + AL AG
Sbjct: 94 GE-----KALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAG 148
Query: 127 CTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 182
++VK +EQ + +F + + G ++ +V T A+ SH ID ++
Sbjct: 149 NAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHIT 207
Query: 183 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 242
F GS VG++VM AAA S L PV LELGGK P ++ DD D++ A + + G + G+ C
Sbjct: 208 FIGSPPVGKKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNC 266
Query: 243 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 302
+ RV V E IYD+ + L ++ +A G P D V G + +FDR+ +
Sbjct: 267 IGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVE 326
Query: 303 EGATLLTGGK----PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 358
+GA LL GGK P +G+Y PT+ +VT DM IA+ E+FGPVM +MK EEA++
Sbjct: 327 KGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVE 386
Query: 359 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY--FAFDSDCPYGGYKMSGFGRD 416
AN+T YGL A + KD+ A ++ + G++ IN + + P+GG K SGFGR
Sbjct: 387 IANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRF 446
Query: 417 CGLESLHNYLQVKSVVT 433
G E L KSV
Sbjct: 447 AGEEGLRGLCNPKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 2e-89
Identities = 151/417 (36%), Positives = 221/417 (52%), Gaps = 18/417 (4%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKI-HGE-V 83
I+L+ A +I + +AGK WA+ D A + L YYA K+ G+ V
Sbjct: 100 ILLRAAAIIRRRKHEFSAWLVKEAGK--PWAEADADTAEAIDFLEYYARQMLKLADGKPV 157
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTT-MFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
Y P+GV I PWNFP M M ++ + AG T+++KPA TP+IA
Sbjct: 158 ESRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAA-IVAGNTVLLKPASDTPVIAA 215
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN- 201
F + + AG+P GV+N VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 216 KFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQP 275
Query: 202 ----LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 257
LK V E+GGK +++ +D D++ AA+ + G+ C A SR V E +YDE
Sbjct: 276 GQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDE 335
Query: 258 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 317
+K+VE K VG+P D A GP +++ FD+I+SYIE GK EG L+ GG+ K
Sbjct: 336 VLEKVVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSK 393
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
GY+I+PTIF +V I + EIFGPV+A +K K + A++ ANNT YGL +++ +
Sbjct: 394 GYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNRE 453
Query: 378 VANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSV 431
R G ++ N C A P+GG+ MSG + G + L +LQ K+V
Sbjct: 454 HLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 3e-88
Identities = 141/413 (34%), Positives = 208/413 (50%), Gaps = 15/413 (3%)
Query: 33 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-----GEVLKMS 87
D + H E L L + G + G + L + A A+ G M
Sbjct: 71 DALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWTTDLGVASPMG 130
Query: 88 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 147
+ RE +GVVG I PWNFP + K+ PALAAG T+++KPA TP A A L
Sbjct: 131 IPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCA---AVL 187
Query: 148 AKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
+L P GV+N+V GA +A +D VSFTGST GR VM AA + LK
Sbjct: 188 GELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAAT-LK 246
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V LELGGKS ++ DD D+ A MA + + G+ C ++R+ V YDE
Sbjct: 247 KVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAA 306
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-KPIGK-KGYYI 321
+ GDP DP GP + +Q DR+ SY++ EG GG +P + +G+++
Sbjct: 307 ATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFV 366
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPT+ + + +A+ EIFGPV+ ++ ++A++ AN++ YGL+ + D A
Sbjct: 367 EPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAA 426
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434
V+ +R G + +N + +D P+GGYK SG GR+ G+ YL+ K + T
Sbjct: 427 VAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIATA 479
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 267 bits (683), Expect = 3e-84
Identities = 137/416 (32%), Positives = 210/416 (50%), Gaps = 13/416 (3%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEV 83
I+ K A ++ + L + GK + A ++ A + + YYA ++ V
Sbjct: 95 AILFKAAAIVRRRRHEFSALLVKEVGKPWNEADA-EVAEAIDFMEYYARQMIELAKGKPV 153
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
Y + P GV I PWNFP + + G +++KPAE P+IA
Sbjct: 154 NSREGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAK 212
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA----- 198
F + + AG+P GV+ VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 213 FVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPG 272
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
+LK V E+GGK +++ +D D+ AA A G+ C A SR V E +YDE
Sbjct: 273 QKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEV 332
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 318
++ VE ++ VG P V GP +D+K F++I+ YIE GK EG L++GG KG
Sbjct: 333 VERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKG 391
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
Y+I PTIF +V +A+ EIFGPV+A ++ +EA++ ANNT YGL G+++ + +
Sbjct: 392 YFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDH 451
Query: 379 ANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDC-GLESLHNYLQVKSV 431
N G ++ N A P+GG+KMSG G + L ++Q K+V
Sbjct: 452 INRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 1e-72
Identities = 133/423 (31%), Positives = 220/423 (52%), Gaps = 22/423 (5%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + A L+ E ++ L L++G L + ++ A+ L + A A + G++
Sbjct: 63 ILDRAAALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSC 121
Query: 87 SRALQG-----YTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
G +T REP+ GV+ I P+N P K++PA+A M+VKP+E+TPL
Sbjct: 122 DLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS 181
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
ALY A + AG+P +L VV G + ++ +D V+FTG +G+ + AA +
Sbjct: 182 ALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AARA 238
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+ LELGG PL++ +D D++ AAD+A+ G N G+ C A R+ VQE + D F +
Sbjct: 239 GYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTE 298
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
LVEK +AW GDP DP+V G +D+ + + +GA LL G + G
Sbjct: 299 LLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGN---VRDGAL 355
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
PT+ V M + + E FGPV +++F +++AI+ +N+T YGL++G+ T L+
Sbjct: 356 YAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYIT 415
Query: 381 TVSRSIRAGI--IWINCYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSVVTPIFN 437
++ G +W + + P+GG K SG G G E++ ++ +K+ ++
Sbjct: 416 RFIAELQVGTVNVWEVPGYRLELT-PFGGIKDSGLGYKEGVQEAMKSFTNLKT-----YS 469
Query: 438 SPW 440
PW
Sbjct: 470 LPW 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 2e-69
Identities = 137/419 (32%), Positives = 202/419 (48%), Gaps = 16/419 (3%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 80
F + ADL+E A+ +A L L+ GK + AK + A RYYA H
Sbjct: 44 FAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----H 97
Query: 81 GEVL--------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
E L A + Y +P+GVV ++PWNFP +PAL AG ++K
Sbjct: 98 AEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLK 157
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
A P ALY A L + AG PDG + G A AI + + TGS GR
Sbjct: 158 HASNVPQTALYLADLFRRAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRA 216
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
V A +K LELGG P ++ D++ AA+ A+ + N G+ C+A+ R V
Sbjct: 217 VAAIAG-DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHA 275
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312
+YD F +K V + A VGDP DP GP ++ D + ++ GAT+L GGK
Sbjct: 276 DVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGK 335
Query: 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 372
G++ PT+ T++T DM + E+FGPV +L + ++EAI+ AN T +GL +
Sbjct: 336 RPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAW 395
Query: 373 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
T+D + AG ++IN + P+GG K SG+GR+ + + +K+V
Sbjct: 396 TRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 3e-69
Identities = 124/404 (30%), Positives = 210/404 (51%), Gaps = 15/404 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG--EV 83
++LK ADL+ L + GK +W + + D+ A + +RYYA AA ++
Sbjct: 82 LLLKAADLLRRRRRELIATLTYEVGK--NWVEAIDDVAEAIDFIRYYARAALRLRYPAVE 139
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + +G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 140 VVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK 199
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA----- 198
+ AG P GV+ +PG G GA + H I ++FTGS + G+++ +AAA
Sbjct: 200 VFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPG 259
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
+ K + +E GGK+ +++ + D + ++ +G+ C A+SR+ + +G Y+
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPV 319
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 318
++L+++A+ VG P + GP +D +Q ++LSYIEHGK EG L+ GGK + +G
Sbjct: 320 LERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEG 378
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGIMTKDL 376
Y++ PT+ V IA+ EIFGPV++++++K + EA++ AN+T YGL G+ ++
Sbjct: 379 YFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKR 438
Query: 377 NVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG 418
R G ++IN A P+GG+K+SG G
Sbjct: 439 EHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 4e-69
Identities = 136/402 (33%), Positives = 206/402 (51%), Gaps = 26/402 (6%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
I+ + ADL+EE A+ LA+L A + GK AK+ ++ A + + A ++ G +
Sbjct: 48 AILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIP 106
Query: 86 M-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
M S +T REPIGVV I +N P + +V+PA+AAGC +IVKPA TPL
Sbjct: 107 MGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS 166
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK----VSFTGSTDVGRQVMQA 196
L F L AG+P+G VP A+A + D SF GS VG +
Sbjct: 167 CLAFVDLLHEAGLPEGWCQAVP-----CENAVAEKLVTDPRVAFFSFIGSARVGWML--- 218
Query: 197 AATSNLKP---VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 253
S L P +LE GG +P+++ D++ + G ++ G++CV+ RV+V
Sbjct: 219 --RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAE 276
Query: 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313
I D+F ++L A+ VVGDP DP GP + ++ DR+ ++ GA LL GGK
Sbjct: 277 IADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR 336
Query: 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 373
+ Y PT+ + D ++ EIFGPV+ + + ++EAI AN+ A + T
Sbjct: 337 LSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394
Query: 374 KDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFG 414
KDL+VA R + A + +N + AF D P+ G + SG+G
Sbjct: 395 KDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 218 bits (559), Expect = 8e-66
Identities = 132/405 (32%), Positives = 196/405 (48%), Gaps = 31/405 (7%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K ADL+E + L L A +AGK + A ++ A + RYYA A ++ +
Sbjct: 96 ILEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSDPELP 154
Query: 87 SR--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
L G L GV I PWNFP +F +++ ALAAG T+I KPAEQTPLIA
Sbjct: 155 GPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA 213
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ--AAATSNL 202
L AGVP VL +VPG G G A+ +H ID V FTGST+ + + + A +
Sbjct: 214 VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPI 273
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
P+ E GGK+ +++ A + + G+ C A +Y+QE I + F + L
Sbjct: 274 LPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEML 333
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
+ VGDP+D + GP +DK + ++ E + E A L+ GY++
Sbjct: 334 KGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVA 392
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
P I V L E+FGP++ +++FK ++EAI+ N T YGL GI ++D
Sbjct: 393 PGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIE 450
Query: 381 TVSRSIRAGIIWIN-----------CYFAFDSDCPYGGYKMSGFG 414
+ AG ++IN P+GG+ +SG G
Sbjct: 451 YWRERVEAGNLYINRNITGAIVGRQ---------PFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 2e-65
Identities = 139/434 (32%), Positives = 205/434 (47%), Gaps = 61/434 (14%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----MGDIPGAANTLRYYAGAADK 78
RG I+ + D + + E L L +L+ GK+ M DI + G + +
Sbjct: 58 RGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI------CDFAVGLSRQ 111
Query: 79 IHGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 135
++G + R G+ + E P+GVVG I +NFP ++ + AL G ++ KP+
Sbjct: 112 LYGLTIPSERP--GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSP 169
Query: 136 QTPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
TPL A+ A + + G+P + ++V G G G A+ + VSFTGST VGR
Sbjct: 170 TTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGR 228
Query: 192 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF----NKGEICVASSR 247
QV QA A + LELGG + +++ +D D+ D+A+ +LF G+ C + R
Sbjct: 229 QVGQAVA-ARFGRSLLELGGNNAIIVMEDADL----DLAVRAVLFAAVGTAGQRCTTTRR 283
Query: 248 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 307
+ V E IYDE ++L + K +GDP D GP K D L+ IE K +G T+
Sbjct: 284 LIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTV 343
Query: 308 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 367
L GGK I G Y+EPTI D I K E F P++ ++KF T+EEAI N GL
Sbjct: 344 LFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGL 402
Query: 368 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC----------------PYGGYKMS 411
++ I T DL R W+ SDC +GG K +
Sbjct: 403 SSSIFTTDL----------RNAFRWLG---PKGSDCGIVNVNIGTSGAEIGGAFGGEKET 449
Query: 412 GFGRDCGLESLHNY 425
G GR+ G ++ Y
Sbjct: 450 GGGRESGSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 3e-64
Identities = 112/333 (33%), Positives = 176/333 (52%), Gaps = 25/333 (7%)
Query: 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150
+ Y + EP+GVV I PWN+P + + A+AAG T+++KP+E P + A LAKL
Sbjct: 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATS---ALLAKL 149
Query: 151 AG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 208
+ VV G A A +A D + FTGS VG+ VM+AAA +L PV+LE
Sbjct: 150 IPKYFDPEAVAVVEGGVEVATALLAEPFD--HIFFTGSPAVGKIVMEAAA-KHLTPVTLE 206
Query: 209 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 268
LGGKSP ++ D ++ AA G N G+ C+A V V E I DE ++L + K
Sbjct: 207 LGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKE 266
Query: 269 WVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 324
+ DP ++ P ++++ FDR+ S ++ GK ++ GG+ + K+ YI PT
Sbjct: 267 FYGEDP-----KESPDYGRIINERHFDRLASLLDDGK-----VVIGGQ-VDKEERYIAPT 315
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
I +V+ D + + EIFGP++ ++ + ++EAI+ N+ LA + ++D V V
Sbjct: 316 ILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLA 375
Query: 385 SIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 415
+G + +N A + P+GG SG G
Sbjct: 376 ETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGA 408
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 208 bits (533), Expect = 9e-63
Identities = 119/340 (35%), Positives = 170/340 (50%), Gaps = 44/340 (12%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFA 145
+P+GVVG I+PWN+P ++ + P ALAAG +++KP+E TP L+A YF
Sbjct: 100 QPLGVVGIIVPWNYP---LYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFD 156
Query: 146 --HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
+A VV G G AA S + D + FTGST VGR VM+AAA NL
Sbjct: 157 EDEVA-----------VVTG-GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAA-ENLT 202
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
PV+LELGGKSP +I D D+ AA+ G L N G+ CVA V V E +EF V
Sbjct: 203 PVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF----V 258
Query: 264 EKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATL--LTGGKPIGKK 317
AKA V P + P ++++ + R+ +E + +GA + L
Sbjct: 259 AAAKAAVAK--MYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
+ PT+ NVT+DM + + EIFGP++ ++ + +++EAI N LA +D
Sbjct: 317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKA 376
Query: 378 VANTVSRSIRAGIIWIN-CYF-AFDSDCPYGGYKMSGFGR 415
+ V R +G + IN D P+GG SG G
Sbjct: 377 EQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGA 416
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 2e-62
Identities = 134/426 (31%), Positives = 208/426 (48%), Gaps = 24/426 (5%)
Query: 22 LEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 81
+ ++L++ L++EH + +A L + GK HS A GD+ + + G + G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKG 118
Query: 82 EVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
E +++ + Y++R+P+GV I P+NFP + A+A G T ++KP+E+ P
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
A+ A L AG PDGVLNVV G A + H D+ VSF GST +GR + ++
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT-TGSA 236
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+ K V G K+ +++ D D + AAD + G+ C+A S V G DE+
Sbjct: 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVP 295
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY- 319
++ E+A+ +G DP GP + + DR+ S I G EGA +L G+ GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 320 ---YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
++ PT+ V M + EIFGPV+ +++ T+EEAI N + YG I T+D
Sbjct: 356 EGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDG 415
Query: 377 NVANTVSRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQ 427
A I G + +N YF+F G+K S FG G + H Y +
Sbjct: 416 AAARRFQHEIEVGQVGVNVPIPVPLPYFSF------TGWKDSFFGDHHIYGKQGTHFYTR 469
Query: 428 VKSVVT 433
K+V T
Sbjct: 470 GKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 205 bits (525), Expect = 9e-62
Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 5/397 (1%)
Query: 21 FLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 80
E I+ +FA+L++ + E LA L + + GK W ++ A + A +
Sbjct: 21 LEERAAILRRFAELLKANKEELARLISRETGK-PLWEAQTEVAAMAGKIDISIKAYHERT 79
Query: 81 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
GE + P GV+ P+NFP + + PAL AG T++ KP+E TP +
Sbjct: 80 GERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAV 139
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
A L + AG+P GVLN+V G G G A+A+H ID + FTGS G + + A
Sbjct: 140 AELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGR 198
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFE 259
K ++LE+GG +PL+++D D++ AA + + G+ C + R+ V +G D F
Sbjct: 199 PGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFL 258
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
++LVE AK +G P GP + R L + G L + +
Sbjct: 259 ERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTA 318
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
++ P I +VT+ + EIFGP++ + ++ +EAI AN TR+GL+AG+++ D +
Sbjct: 319 FLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALF 377
Query: 380 NTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGR 415
IRAGI+ N S P+GG +SG R
Sbjct: 378 ERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 205 bits (525), Expect = 1e-61
Identities = 126/391 (32%), Positives = 180/391 (46%), Gaps = 47/391 (12%)
Query: 39 AEVLAVLEALD--AGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR 96
E+L VL ++ L W K P T G KI
Sbjct: 58 TEILPVLSEINHAIKHLKKWMK----PKRVRTPLLLFGTKSKIR---------------Y 98
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156
EP GV I PWN+P + F + A+AAG T I+KP+E TP + A + + A D
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 157 VLNVVPGFGPTAGAAIASH---MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 213
V V G A +A + D + FTGS VG+ VM AAA +L V+LELGGKS
Sbjct: 159 V-AVFEG-----DAEVAQALLELPFDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKS 211
Query: 214 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV-- 271
P ++ + D+ AA G N G+ C+A V+V E + D F VE KA +
Sbjct: 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEIEKF 267
Query: 272 -GDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
G D A + P V+ + FDR+ ++ +GA + GG+ YI PT+
Sbjct: 268 YGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVL 324
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
TNVT DM I + EIFGPV+ ++ ++ ++E I+ N LA + +KD N V
Sbjct: 325 TNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLART 384
Query: 387 RAGIIWINCYFA--FDSDCPYGGYKMSGFGR 415
+G + +N + + P+GG SG G
Sbjct: 385 SSGGVVVNDVVLHFLNPNLPFGGVNNSGIGS 415
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 1e-59
Identities = 114/327 (34%), Positives = 170/327 (51%), Gaps = 21/327 (6%)
Query: 96 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155
+EP+GVV I PWN+P + + A+AAGCT+++KP+E TP A A L +
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDP 164
Query: 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 215
VV G P A + D K+ +TGS VGR + +AAA +L PV+LELGGKSP+
Sbjct: 165 DAFQVVQGGVPETTALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPV 221
Query: 216 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 275
++ + D+ AA L G N G+ICVA V V +YDEF VE+ K + D F
Sbjct: 222 IVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL--DEF 275
Query: 276 DPAVRQGPQ-----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 330
P V+ + F+R+ S ++ K + ++ GG+ +I PTI ++V+
Sbjct: 276 YPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK---VVIGGEMDEAT-RFIPPTIVSDVS 331
Query: 331 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390
D + E+FGPV+ ++K ++EAIK N+ LA I T D + + + R+G
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391
Query: 391 IWIN-CYFAFDSD-CPYGGYKMSGFGR 415
+ IN D P+GG SG+G
Sbjct: 392 VVINDTLIHVGVDNAPFGGVGDSGYGA 418
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 2e-57
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 45/359 (12%)
Query: 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LI 140
Y EP GVV I PWN+P F + ++P A+AAG T ++KP+E TP +I
Sbjct: 94 SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
F + + VV G + D + FTGS VG+ VM+AAA
Sbjct: 151 EETF---------DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK- 198
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+L PV+LELGGKSP ++ +D ++ AA + G N G+ CVA V V E + ++F K
Sbjct: 199 HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK 258
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316
+L E+ K + DP + P +++K FDR+ +++GK ++ GG +
Sbjct: 259 ELKEEIKKFYGEDP-----LESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGN-TDR 307
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
+ YIEPTI NVT D + + EIFGP++ ++ + T++EAI+ + LA + ++D
Sbjct: 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDK 367
Query: 377 NVANTVSRSIRAGIIWIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
V V ++ G IN + A + P+GG SG G G S + KS++
Sbjct: 368 KVEKKVLENLSFGGGCINDTIMHLA-NPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL 425
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 195 bits (496), Expect = 3e-57
Identities = 130/402 (32%), Positives = 193/402 (48%), Gaps = 13/402 (3%)
Query: 35 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL--- 90
+ +E +A + + GK + A+ ++ +AN +YA HG +LK L
Sbjct: 64 LRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVEN 117
Query: 91 -QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149
Q P+G + I+PWNFP P L AG ++K A A A + K
Sbjct: 118 QQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFK 177
Query: 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 209
AG+P GV + I + I V+ TGS G + A A + LK LEL
Sbjct: 178 DAGIPQGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAI-GAQAGAALKKCVLEL 235
Query: 210 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 269
GG P ++ +D D+ A A+ G N G++C A+ R ++EGI F ++ V A A
Sbjct: 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAAL 295
Query: 270 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 329
+GDP D GP D + +E EGA LL GG+ I G Y PT+ NV
Sbjct: 296 KMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANV 355
Query: 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389
T +M + E+FGPV A+ K E A++ AN++ +GL+A I T D A ++ + G
Sbjct: 356 TPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECG 415
Query: 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
++IN Y A D+ +GG K SGFGR+ LH + +++V
Sbjct: 416 GVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 1e-54
Identities = 129/386 (33%), Positives = 195/386 (50%), Gaps = 38/386 (9%)
Query: 30 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 89
+ ADL+E + L L +AGK A + ++ A + RYYA A ++ G
Sbjct: 615 RAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGA----PEK 669
Query: 90 LQGYT-----LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
L G T LR GV I PWNFP +F +V+ ALAAG T+I KPAEQTPLIA
Sbjct: 670 LPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L AG+P VL ++PG G T GAA+ + I V+FTGST+ R + + A +
Sbjct: 730 AVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGP 789
Query: 204 PVSL--ELGGKSPLL---------IFDDVDVNTAADMALLGILFNKGEICVASSRV-YVQ 251
V L E GG++ ++ + DDV V +A A G+ C A RV +VQ
Sbjct: 790 IVPLIAETGGQNAMIVDSTALPEQVVDDV-VTSAFRSA--------GQRCSA-LRVLFVQ 839
Query: 252 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311
E I D + L VGDP + GP +D + + ++IE KRE L
Sbjct: 840 EDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLP 899
Query: 312 KPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLA 368
P G + G+++ PT F + + + E+FGP++ ++++K +++ I + N T YGL
Sbjct: 900 LPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLT 957
Query: 369 AGIMTKDLNVANTVSRSIRAGIIWIN 394
GI ++ A+ ++ +R G +++N
Sbjct: 958 LGIHSRIEETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 189 bits (480), Expect = 8e-54
Identities = 134/373 (35%), Positives = 186/373 (49%), Gaps = 9/373 (2%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-K 85
+MLKF +LI ++ + LA+ + GK GDI + + G A GE L
Sbjct: 178 VMLKFQELIRKNMDKLAMNITTEQGKTLK-DSHGDIFRGLEVVEHACGMATLQMGEYLPN 236
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+S + Y++REP+GV I P+NFP + A+ G T I+KP+E+ P ++ A
Sbjct: 237 VSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILA 296
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA AG+PDGVLN+V G T AI DI VSF GS G + AA K +
Sbjct: 297 ELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRI 354
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+G K+ L+ D +++ + L G+ C+A S V V G +E KLVE+
Sbjct: 355 QSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKLVER 413
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYI 321
AKA V +P GP + K+ +RI I+ G +GA LL G+ P +KG +I
Sbjct: 414 AKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFI 473
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PTI + VT DM K EIFGPV+ M+ + +EAI N +YG A I T A
Sbjct: 474 GPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARK 533
Query: 382 VSRSIRAGIIWIN 394
I AG I IN
Sbjct: 534 FQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 2e-53
Identities = 126/395 (31%), Positives = 196/395 (49%), Gaps = 18/395 (4%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ +FA L+EE+ E LA + A + GK W ++ N + A + GE
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPL-WEAATEVTAMINKIAISIQAYHERTGEK--- 119
Query: 87 SRALQGYT--LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ LR P GVV P+NFP + + PAL AG T++ KP+E TP +A
Sbjct: 120 RSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEL 179
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L + AG+P GVLN+V G G G A+A+H DID + FTGS + G + + A K
Sbjct: 180 TVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEK 238
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKL 262
++LE+GG +PL+I + D++ A + + + G+ C + R+ V +G D F +L
Sbjct: 239 ILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARL 298
Query: 263 VEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYY 320
V AK VG +P G + ++ +++ G +LL + G
Sbjct: 299 VAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGL- 357
Query: 321 IEPTIF--TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
+ P I T V E + E FGP++ ++++ +EAI+ ANNTR+GL+AG+++ D
Sbjct: 358 LTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRED 414
Query: 379 ANTVSRSIRAGII-WINCYFAFDSDCPYGGYKMSG 412
+ IRAGI+ W S P+GG SG
Sbjct: 415 YDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 7e-52
Identities = 125/409 (30%), Positives = 189/409 (46%), Gaps = 31/409 (7%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E + + ADL+E H L L +AGK A + ++ A + RYYA + GE
Sbjct: 97 ERAAKLDRLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE 155
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
E GV I PWNFP +F ++S ALAAG T+I KPAEQT LIA
Sbjct: 156 -----------FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAY 204
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
L + AG P G + ++PG G GAA+ S I V+FTGST+V + + Q A
Sbjct: 205 RAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED 264
Query: 203 KPVSL--ELGGKSPLLIFDDVDVNTAADMALLGIL---FNK-GEICVASSRVYVQEGIYD 256
PV L E GG++ ++ VD + + +L F+ G+ C A + VQE + D
Sbjct: 265 APVPLIAETGGQNAMI----VDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVAD 320
Query: 257 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT---LLTGGKP 313
+ + VG P GP +D + +L++IEH + L
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380
Query: 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGI 371
+ G ++ PT+F +D+ E+FGPV+ ++++K E + + N T YGL G+
Sbjct: 381 ACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGV 438
Query: 372 MTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG 418
++ + + R G ++N A P+GG +SG G G
Sbjct: 439 HSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 4e-51
Identities = 128/385 (33%), Positives = 193/385 (50%), Gaps = 43/385 (11%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLK 85
I+ + ADL+E H L L +AGK + A + ++ A + LRYYA A
Sbjct: 617 ILERAADLMEAHMPELFALAVREAGK--TLANAIAEVREAVDFLRYYAAQA--------- 665
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
R L +P+G V I PWNFP +F +++ AL AG T++ KPAEQTPLIA
Sbjct: 666 --RRLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAV 723
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L AGVP L ++PG G T GAA+ + I V FTGST+V R + + A + PV
Sbjct: 724 RLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPV 783
Query: 206 SL--ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRV-YVQEG 253
L E GG++ +++ DV + +A D A G+ C A RV +QE
Sbjct: 784 PLIAETGGQNAMIVDSSALPEQVVADV-IASAFDSA--------GQRCSA-LRVLCLQED 833
Query: 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313
+ D L +GDP+ + GP +D + I ++IE + G + P
Sbjct: 834 VADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLP 893
Query: 314 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAG 370
+KG ++ PT+ + + + E+FGPV+ +++FK ++ I N T YGL G
Sbjct: 894 AETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFG 951
Query: 371 IMTK-DLNVANTVSRSIRAGIIWIN 394
+ ++ D +A+ SR IRAG I++N
Sbjct: 952 LHSRIDETIAHVTSR-IRAGNIYVN 975
|
Length = 1208 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 6e-51
Identities = 111/336 (33%), Positives = 169/336 (50%), Gaps = 9/336 (2%)
Query: 98 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 157
P+GVV I P+N+P + K++PAL AG +++KP Q + AL+ H LAG P G+
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 158 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 217
++ V G G G + H ++ +SFTG D G + + A + P+ +ELGGK ++
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIV 273
Query: 218 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 277
+D D++ AA + G G+ C A V V E + D +K+ K VG P D
Sbjct: 274 LEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDD 333
Query: 278 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 337
P V + + I + K +GAT K ++G I P + NV DM IA
Sbjct: 334 C-DITPVVSESSANFIEGLVMDAKEKGATFCQEWK---REGNLIWPLLLDNVRPDMRIAW 389
Query: 338 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397
E FGPV+ +++ +VEE I N + +GL + T+D+N A +S ++ G + IN
Sbjct: 390 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 449
Query: 398 AFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
A D P+ G K SG G S++ +VKS V
Sbjct: 450 ARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 7e-51
Identities = 130/405 (32%), Positives = 196/405 (48%), Gaps = 39/405 (9%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
I+ + ADL+E L L +AGK S A + ++ A + LRYYAG A
Sbjct: 176 AILERAADLMEAQMPQLMGLLVREAGKTLSNA-IAEVREAVDFLRYYAGQA--------- 225
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
R G P+G V I PWNFP +F +++ ALAAG +++ KPAEQTPLIA
Sbjct: 226 --RDTFGNLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAV 283
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L AGVP GVL ++PG G T GAA+ + + V FTGST+V R + + A +P+
Sbjct: 284 RLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPI 343
Query: 206 SL--ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 254
L E GG++ +++ DV + +A D A G+ C A + +QE +
Sbjct: 344 PLIAETGGQNAMIVDSSALAEQVVADV-LASAFDSA--------GQRCSALRVLCLQEDV 394
Query: 255 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314
D L VG+P GP +D + I +I+ + +G + P
Sbjct: 395 ADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPN 454
Query: 315 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGI 371
+KG ++ PT+ D L + E+FGPV+ ++++K ++E I N T YGL G+
Sbjct: 455 SLQKGTFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGV 512
Query: 372 MTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG 414
T+ V+ AG +++N A P+GG +SG G
Sbjct: 513 HTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 2e-48
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151
Y + EP+GVV I WN+P + + ++ A+AAG T+++KP+E +P + A L
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLL-TK 161
Query: 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 211
+ + V+ G G + D + FTGS VG+ VMQAAA NL P +LELGG
Sbjct: 162 YLDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGG 218
Query: 212 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 271
KSP+++ ++ AA G N G+ CVA V V I D+F + L E K +
Sbjct: 219 KSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-F 277
Query: 272 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 331
G+ + V++ R+ I K G ++ GG+ + + Y+ PTI N
Sbjct: 278 GEDPKKSEDYSRIVNEFHTKRLAELI---KDHGGKVVYGGE-VDIENKYVAPTIIVNPDL 333
Query: 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391
D + + EIFGP++ ++ ++ ++E ++ N+ LA +D V + +G +
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAV 393
Query: 392 WIN-CYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
IN C F + + P+GG SG G G + K V+
Sbjct: 394 VINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 4e-47
Identities = 127/410 (30%), Positives = 201/410 (49%), Gaps = 15/410 (3%)
Query: 11 RRLITVHGHVFLEPR-GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 69
R + LE R ++ +FA L+EE E LA + A + GK W ++ +
Sbjct: 45 RAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGK-PLWETRTEVASMIGKV 103
Query: 70 RYYAGAADKIHGEV---LKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAA 125
A + GE + RA+ LR P GVV P+NFP + + PAL A
Sbjct: 104 AISIKAYHERTGESENPMPDGRAV----LRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 159
Query: 126 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 185
G T++ KP+E TP +A L + AG+P GVLN+V G G A+A+H DID + FTG
Sbjct: 160 GNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTG 218
Query: 186 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 245
S++ G + + A K ++LE+GG +PL++ + D++ A + + + G+ C +
Sbjct: 219 SSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCA 278
Query: 246 SRVYVQEGIY-DEFEKKLVEKAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303
R+ V +G D F +LVE A+ VG +P G + + R+L+
Sbjct: 279 RRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLAL 338
Query: 304 GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT 363
G L + + + P I +VT + E FGP++ ++++ +EAI ANNT
Sbjct: 339 GGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNT 397
Query: 364 RYGLAAGIMTKDLNVANTVSRSIRAGII-WINCYFAFDSDCPYGGYKMSG 412
R+GL+AG+++ D + + IRAGI+ W S P+GG SG
Sbjct: 398 RFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 1e-44
Identities = 108/330 (32%), Positives = 158/330 (47%), Gaps = 26/330 (7%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLIALYFAHLAKLAG- 152
EP+GVV I WNFP F + + P A+AAG +++KP+E P + A LAKL
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153
Query: 153 -VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 211
+ + V+ G G A+ DK+ FTGS VGR +M AAA +L PV+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210
Query: 212 KSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 270
K P+++ VD+ A G N G+ C+A V V+E L + +
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF 270
Query: 271 VGDPF--DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 328
+P R V+ F R LS + ++ GG+ +K YIEPTI +
Sbjct: 271 GENPKESKDLSRI---VNSHHFQR-LSRLLDDPSVADKIVHGGE-RDEKNLYIEPTILLD 325
Query: 329 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388
D I EIFGP++ ++ K +EE+I+ N+ LAA + TK+ + + +
Sbjct: 326 PPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSS 385
Query: 389 GIIWIN---CYFAFDSDCPYGGYKMSGFGR 415
G + N +A D P+GG SGFG
Sbjct: 386 GGVTFNDTVVQYAID-TLPFGGVGESGFGA 414
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 6e-44
Identities = 123/431 (28%), Positives = 197/431 (45%), Gaps = 51/431 (11%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG I+ + D + + L L +L+ GK+ + +G++ + + G + +++G +
Sbjct: 80 RGEIVRQIGDALRAKLDYLGRLVSLEMGKILA-EGIGEVQEIIDMCDFAVGLSRQLNGSI 138
Query: 84 LKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
+ R + + E P+G+VG I +NFP + AL G ++ K A TPLI
Sbjct: 139 IPSERP--NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
Query: 141 ALYFAHLAKLAGV------PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 194
+ L +A V P + G G G AIA I VSFTGS+ VG ++
Sbjct: 197 TIAMTKL--VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG-LMV 252
Query: 195 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 254
Q + LEL G + +++ DD D+ A L + G+ C R+ + E I
Sbjct: 253 QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESI 312
Query: 255 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314
YD+ ++L+ K +GDP + GP + IE K +G +LTGG I
Sbjct: 313 YDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI 372
Query: 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 374
+G +++PTI ++ D + K E+FGPV+ +MKFKT+EEAI+ N+ GL++ I T+
Sbjct: 373 ESEGNFVQPTI-VEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTR 431
Query: 375 DLNVANTVSRSIRAGII--WINCYFAFDSDC----------------PYGGYKMSGFGRD 416
I WI SDC +GG K +G GR+
Sbjct: 432 ------------NPETIFKWIG---PLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
Query: 417 CGLESLHNYLQ 427
G +S Y++
Sbjct: 477 AGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 2e-43
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 37/337 (10%)
Query: 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP----LIA-LYFAHL 147
Y +EP+GVV I WN+P + + + A+AAG +++KP+E +P L+A L +L
Sbjct: 95 YIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL 154
Query: 148 AK------LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
K L GV + + F D + +TGST VG+ VMQAAA +
Sbjct: 155 DKECYPVVLGGVEETTELLKQRF--------------DYIFYTGSTSVGKIVMQAAA-KH 199
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
L PV+LELGGKSP + D++ AA G N G+ C+A V + ++F +
Sbjct: 200 LTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEA 259
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
L + K + DP + G ++ + F R+ + GK + GG+ +K YI
Sbjct: 260 LKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKLLSGGK-----VAIGGQ-TDEKERYI 312
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ T+V + + EIFGP++ ++ ++EAI+ N+ LA + + + V N
Sbjct: 313 APTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINK 372
Query: 382 VSRSIRAGIIWIN---CYFAFDSDCPYGGYKMSGFGR 415
+ + +G + +N ++ DS P+GG SG G
Sbjct: 373 ILSNTSSGGVCVNDTIMHYTLDS-LPFGGVGNSGMGA 408
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 2e-42
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 36/337 (10%)
Query: 100 GVVGHIIPWNF-------PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152
G V + P+NF PAL G ++ KP++ L + + AG
Sbjct: 172 GFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWKPSDTAVLSNYLVYKILEEAG 223
Query: 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSL 207
+P GV+N VPG GP G + + + + FTGST + + + + +
Sbjct: 224 LPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVG 283
Query: 208 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 267
E GGK+ L+ DV++ + G +G+ C A+SR YV E ++ E +++L+E+ K
Sbjct: 284 ETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELK 343
Query: 268 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIF 326
+GDP D + G +D+K FDRI YI+H K + A ++ GGK GY++EPT+
Sbjct: 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVI 403
Query: 327 --TNVTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
T+ ++ EIFGPV+ + F+ E + + + Y L I +D
Sbjct: 404 ETTDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELVDTT--SPYALTGAIFAQDRKAI 459
Query: 380 NTVSRSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 412
+ ++R AG +IN A P+GG + SG
Sbjct: 460 REATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 149 bits (377), Expect = 1e-39
Identities = 121/411 (29%), Positives = 189/411 (45%), Gaps = 23/411 (5%)
Query: 21 FLEPRGIMLKFADLI--EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 78
F + I LK ADL+ AE+LA L K A++ + + R+ A A +
Sbjct: 90 FYDRAAIFLKAADLLSGPYRAEILAAT-MLGQSKTVYQAEIDAVAELIDFFRFNAKYARE 148
Query: 79 IHGEVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 137
++ + + T P+ G V I P+NF + +PAL G T+I KP++
Sbjct: 149 LYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTA 207
Query: 138 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 197
L + + AG+P GV+N VPG GP + + D+ + FTGST + + +
Sbjct: 208 MLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQV 267
Query: 198 ATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
A + N + E GGK ++ DV + G +G+ C A SR+YV
Sbjct: 268 AQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPH 327
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR--EGATLLTG 310
++ F+ +L+ + VGDP D G +D+K F +I+ YIEH K T+L G
Sbjct: 328 SLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAG 387
Query: 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRY 365
GK GY++EPT+ + + K EIFGPV+ + K+K + + + S T Y
Sbjct: 388 GKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSY 445
Query: 366 GLAAGIMTKDLNVANTVSRSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 412
GL + KD + + +R AG +IN A P+GG + SG
Sbjct: 446 GLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 4e-38
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+ +V DM IA+ EIFGPV+ +++FK EEAI AN+T YGL AG+ T+DLN A V+
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 384 RSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+RAG ++IN P+GG K SG GR+ G L Y + K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 5e-37
Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 48/385 (12%)
Query: 32 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKMSRAL 90
ADL+E + L L +AGK S A + ++ A + LRYYAG D +
Sbjct: 714 ADLMEAQMQTLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDFDND-------- 764
Query: 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150
T R P+G V I PWNFP +F +V+ ALAAG +++ KPAEQTPLIA +
Sbjct: 765 ---THR-PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLE 820
Query: 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SNLKPVSL 207
AGVP GV+ ++PG G T GAA+ + + V FTGST+V R + + A +P+ L
Sbjct: 821 AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPL 880
Query: 208 --ELGGKSPLLIFD----------DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 255
E GG++ +I D DV + +A D A G+ C A + +Q+ +
Sbjct: 881 IAETGGQNA-MIVDSSALTEQVVADV-LASAFDSA--------GQRCSALRVLCLQDDVA 930
Query: 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315
D K L +G+P + GP +D + I +I+ + +G + +
Sbjct: 931 DRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENS 990
Query: 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+ G ++ PT+ + D L K E+FGPV+ ++++ ++E I+ N + YGL G
Sbjct: 991 EDWQSGTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLG 1048
Query: 371 IMTK-DLNVANTVSRSIRAGIIWIN 394
+ T+ D +A V+ S G +++N
Sbjct: 1049 VHTRIDETIAQ-VTGSAHVGNLYVN 1072
|
Length = 1318 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 9e-37
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 35/354 (9%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP-- 154
EP+GVV WNFP + + A+AAG +++KP+E P + + A A +P
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161
Query: 155 --DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 212
+ V+ G GP G + H DK+ FTGS VGR +M AAA +L PV+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGK 218
Query: 213 SPLLIFDDVDVNTAADMALLGILFNK-----GEICVASSRVYVQEG---IYDEFEKKLVE 264
P I D + + +A+ I+ K G+ C+A V V+E I E K ++
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIK 277
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 324
K + A ++KK F R+ + ++ R A+++ GG I +K +IEPT
Sbjct: 278 KFFGENPRESKSMA----RILNKKHFQRLSNLLKD-PRVAASIVHGGS-IDEKKLFIEPT 331
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN-----VA 379
I N D I EIFGP++ ++ K +E++I N+ LA T + ++
Sbjct: 332 ILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
T S S+ I +A DS P+GG SGFGR G S + K+V+
Sbjct: 392 ETSSGSVTFNDAIIQ--YACDS-LPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-30
Identities = 97/347 (27%), Positives = 147/347 (42%), Gaps = 43/347 (12%)
Query: 61 DIPGAANTLRYYAGAADKI-------HGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA + GE +++ + A QG + P GV I +NF
Sbjct: 101 DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAG 169
P + K +PAL AG +IVKPA T + AG+ P G L+VV G +
Sbjct: 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SS 216
Query: 170 AAIASHMD-IDKVSFTGSTDVGRQ------VMQAAATSNLKPVSLELGGKSPLLIFDDVD 222
A + H+ D VSFTGS + V+Q + N++ SL S LL D
Sbjct: 217 AGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSL----NSALLGPDAAP 272
Query: 223 VNTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 278
+ A D+ + ++ G+ C A R++V E +YD + L + VG+P +
Sbjct: 273 GSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDG 332
Query: 279 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGK---KGYYIEPTIFTNVTED 332
VR GP V + Q + + + R A +L G + + PT+ D
Sbjct: 333 VRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLL--GASD 389
Query: 333 MLIAK----NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375
A E+FGPV L+ ++ A+ A + L A + + D
Sbjct: 390 PDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-26
Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 20/344 (5%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156
EP+GVV I WN+P + V A++AG +++KP+E P + A L +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSS- 169
Query: 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 216
+ VV G A + D K+ +TGS+ +GR +M AAA +L PV LELGGKSP++
Sbjct: 170 AVRVVEGAVTETTALLEQKWD--KIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSPVV 226
Query: 217 IFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK----AWVV 271
+ D D+ + G N G+ C++ + + E+ K+++ K +
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTK----EYAPKVIDAMKKELETFYG 282
Query: 272 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 331
+P + + V+ FDR LS + K ++ GG+ ++ I PTI +V
Sbjct: 283 KNPME-SKDMSRIVNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPL 339
Query: 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391
D LI EIFGP++ ++ +EE+ + LAA + T + + + ++ AG I
Sbjct: 340 DSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGI 399
Query: 392 WIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+N + A + P+GG SG G G S + K+V+
Sbjct: 400 VVNDIAVHLALHT-LPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-26
Identities = 105/395 (26%), Positives = 157/395 (39%), Gaps = 52/395 (13%)
Query: 25 RGIMLK-FADLIEEHAEVLAVLEALDAG-KLHSWAKMGDIPGAANTLRYYAGAADK---- 78
R MLK A + E E L L A + SW DI G TL YA +
Sbjct: 61 RAAMLKALAKYLMERKEDLYALSAATGATRRDSWI---DIDGGIGTLFAYASLGRRELPN 117
Query: 79 ----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 131
+ G+V +S+ G + P GV HI +NFP K +PAL AG +IV
Sbjct: 118 AHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIV 177
Query: 132 KPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTDV 189
KPA T + +G+ P+G L ++ G + + H+ D V+FTGS
Sbjct: 178 KPATATAYLTEAVVKDIVESGLLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAAT 233
Query: 190 GRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK---------- 238
++ + + E + ++ D LF K
Sbjct: 234 AAKLRAHPNIVARSIRFNAEADSLNAAILGPDA----TPGTPEFD-LFVKEVAREMTVKA 288
Query: 239 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 298
G+ C A R +V E D + L + VVGDP VR GP V ++Q + + + +
Sbjct: 289 GQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVA 348
Query: 299 HGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTEDMLIAKN----EIFGPVMAL 347
A ++ GG +KG + PT+ + +D A E FGPV L
Sbjct: 349 T-LLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL--LCDDPDAATAVHDVEAFGPVATL 405
Query: 348 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
M + ++ EAI+ A R L A ++T D A +
Sbjct: 406 MPYDSLAEAIELAARGRGSLVASVVTNDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 7e-24
Identities = 93/439 (21%), Positives = 157/439 (35%), Gaps = 54/439 (12%)
Query: 26 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA--GAADKIH--- 80
+ + + + +A L GK W +I G LR A + +I
Sbjct: 25 DFLARIIQRLAAKSYDIAAGAVLVTGK--GWMFAENICGDQVQLRARAFVIYSYRIPHEP 82
Query: 81 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
G L Q + R P G V I +NFP + ++++ ALA G +IVKP ++
Sbjct: 83 GNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIV 142
Query: 141 ALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
L AG +P + ++ G G T A+ H + V FTGS+ V ++ A
Sbjct: 143 MQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPNPKMVLFTGSSRVAEKLALDAKQ 201
Query: 200 SNLKPVSLELGGKSPLLIFDDVDV------NTAADMALLGILFNKGEICVASSRVYVQEG 253
+ + LEL G + ++ D DM G+ C A S ++V E
Sbjct: 202 A---RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA-----CSGQKCTAQSMLFVPE- 252
Query: 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ---VDKKQFDRILSYIEHGKREGATLLTG 310
+ + LVEK KA R+ + + Q L+ I H + ++L
Sbjct: 253 --NWSKTPLVEKLKA--------LLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLF 302
Query: 311 GKPIGKK-------GYYIEPTIFTNVTEDMLIAK---NEIFGPVMALMKFKTVEEAIKSA 360
K G + +F + E + + EIFGP ++++K + A+
Sbjct: 303 SGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLE 362
Query: 361 NNTRY--GLAAGIM-TKDLNVANTVSRSIRAGIIWINCYF---AFDSDCPYGGYKMSGFG 414
R L A I + + + AG + + GG G
Sbjct: 363 LLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRG 422
Query: 415 RD-CGLESLHNYLQVKSVV 432
G E++ + +
Sbjct: 423 AGIGGPEAIKLVWRCHAEQ 441
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 1e-21
Identities = 94/378 (24%), Positives = 144/378 (38%), Gaps = 30/378 (7%)
Query: 25 RGIMLK-FADLIEEHAEVLAVLEA-LDAGKLHSWAKMGDIPGAANTLRYYAGAADK---- 78
R MLK A + E E L L A A + +W DI G TL Y+ +
Sbjct: 61 RARMLKALAQYLSERKEALYALAATTGATRRDNWV---DIDGGIGTLFTYSSLGRRELPD 117
Query: 79 ----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 131
E +S+ + QG + P GV I +NFP K +PA AG +
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177
Query: 132 KPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTDV 189
KPA T +A +G +P+G L ++ G +AG + H+D D V+FTGS
Sbjct: 178 KPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGD-LLDHLDHRDVVAFTGSAAT 233
Query: 190 GRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-----GEICV 243
++ + E + ++ +D + + + G+ C
Sbjct: 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCT 293
Query: 244 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303
A RV V + + + K L + V+GDP + V GP V +Q + + +
Sbjct: 294 AIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAA 353
Query: 304 GATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIFGPVMALMKFKTVEEAIKSANN 362
GA + GG P G + PT+ + E FGPV + EA + A
Sbjct: 354 GAEVRLGG-PGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAAR 412
Query: 363 TRYGLAAGIMTKDLNVAN 380
L A + T D A
Sbjct: 413 GGGSLVATLATSDPEEAR 430
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 3e-20
Identities = 120/423 (28%), Positives = 167/423 (39%), Gaps = 100/423 (23%)
Query: 25 RGIMLK-FADLIEEHAEVLAVLEALD-AGKLHSWAKMGDIPGAANTLRYYAGAA------ 76
R MLK A + E E L L A A + SW DI G TL YA
Sbjct: 65 RAAMLKALAKYLLERKEELYALSAQTGATRRDSWI---DIEGGIGTLFTYASKGRRELPN 121
Query: 77 DKIH--GEVLKMSRALQG-------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC 127
D + GEV +S+ G T E GV HI +NFP K++PA AG
Sbjct: 122 DTVLVEGEVEPLSK--GGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAPAFLAGV 177
Query: 128 TMIVKPAEQTPLIALYFAHLAKLA--------GVPDGVLNVVPGFGPTAGAAIASHMDI- 178
IVKPA T A+L + +P+G L ++ G +AG + H+D
Sbjct: 178 PAIVKPATAT-------AYLTEAVVRLIVESGLLPEGALQLICG---SAGD-LLDHLDGQ 226
Query: 179 DKVSFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAAD---MALLGI 234
D V+FTGS AAT+ L+ P ++ + V AD A+LG
Sbjct: 227 DVVTFTGS----------AATAQKLR--------AHPNVVANSVPFTAEADSLNAAILGP 268
Query: 235 ----------LFNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 274
LF K G+ C A R V + D + L + VVGDP
Sbjct: 269 DATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDP 328
Query: 275 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG---KKGYYIEPTIFT 327
VR G +Q + + + A ++ GG +G +KG + PT+
Sbjct: 329 RLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLY 387
Query: 328 NVTEDMLIAKN----EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
+D L A E FGPV LM + ++EAI+ A + L A ++T D VA +
Sbjct: 388 C--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELV 445
Query: 384 RSI 386
Sbjct: 446 LGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 2e-15
Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 24/253 (9%)
Query: 122 ALAAGCTMIVK--PA--EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 177
ALAAGC ++VK PA + L+A + G+P GV +++ G G G A+ H
Sbjct: 131 ALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPA 190
Query: 178 IDKVSFTGSTDVGRQVMQAAATSNL-KPVSLELGGKSPLLIFDDVDVNTAADMA--LLG- 233
I V FTGS GR + AAA P ELG +P+ I +A +G
Sbjct: 191 IKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGS 250
Query: 234 ILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 292
+ G+ C V V G D F L E A P + + + + +
Sbjct: 251 LTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYR---QGVEA 307
Query: 293 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK----NEIFGPVMALM 348
+ + G +L GG + G PT+F V +A E+FGP ++
Sbjct: 308 LAA------APGVRVLAGG-AAAEGGNQAAPTLFK-VDAAAFLADPALQEEVFGPASLVV 359
Query: 349 KFKTVEEAIKSAN 361
++ E + A
Sbjct: 360 RYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 61/290 (21%), Positives = 95/290 (32%), Gaps = 28/290 (9%)
Query: 8 QHVRRLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 67
R LI L L + E A + +++ A S +K+ +
Sbjct: 15 DEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKN---ID 71
Query: 68 TLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC 127
T R + I +L + + Y PIGV HI+P P + + +A
Sbjct: 72 TERGITASVGHIQDVLLPDN--GETYVRAFPIGVTMHILPSTNPLSGITSALR-GIATRN 128
Query: 128 TMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSF 183
I +P P L A ++ + P +A SH ID +
Sbjct: 129 QCIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVA 187
Query: 184 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 243
TG D V A S PV G SP+++ + D A+ F+ C
Sbjct: 188 TGGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACA 243
Query: 244 ASSRVYVQEGIYD----EFEKKLVE---------KAKAWVVGDPFDPAVR 280
+ +YV + + D EF+ KLV K + FD
Sbjct: 244 SEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 42/326 (12%)
Query: 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150
Q R P G V I P+NFP + +++ AL G ++K + ++ F L L
Sbjct: 135 QSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL 194
Query: 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 210
G+P ++++ GPT I + FTGS+ V ++ A + K V LE
Sbjct: 195 CGMPATDVDLIHSDGPTMN-KILLEANPRMTLFTGSSKVAERL---ALELHGK-VKLEDA 249
Query: 211 GKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVY-----VQEGIYDEFEKKLVE 264
G ++ DV DV+ A G+ C A S ++ VQ GI D+ K L E
Sbjct: 250 GFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKL-KALAE 308
Query: 265 KAKA--WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGY 319
+ K +G P + + D++L+ GA +L GGKP+
Sbjct: 309 QRKLEDLTIG----PVLTWTTERILDHVDKLLAI------PGAKVLFGGKPLTNHSIPSI 358
Query: 320 Y--IEPTIFTNVTEDMLIAKN------EIFGPVMALMKFKTVEE--AIKSANNTRYGLAA 369
Y EPT E++ I +N E+FGP + ++K + +++ L A
Sbjct: 359 YGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTA 418
Query: 370 GIMTKDLN-----VANTVSRSIRAGI 390
+++ D+ +ANTV+ + AGI
Sbjct: 419 AVVSNDIRFLQEVLANTVNGTTYAGI 444
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 63/325 (19%), Positives = 115/325 (35%), Gaps = 50/325 (15%)
Query: 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAK 149
+ EPIGVV I P PT+ K +L ++I P + T A A
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 209
AG P+ ++ + + I + TG G V++AA +S KP
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSG-KPAIGVG 205
Query: 210 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 269
G +P++I + D+ A + F+ G IC + V V + +YDE +L E A+
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEV-MRLFEGQGAY 264
Query: 270 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 329
+ ++ + Q IL + +G+ Y I V
Sbjct: 265 KL---------TAEELQQVQ-PVILKNGD----------VNRDIVGQDAYKIAAAAGLKV 304
Query: 330 TEDMLI-------------AKNEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIM 372
++ I +E PV+A+ + +A A G + +
Sbjct: 305 PQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMY 364
Query: 373 TKDLNVANTVSR---SIRAGIIWIN 394
+ ++ +++ +++ N
Sbjct: 365 SDNIKAIENMNQFANAMKTSRFVKN 389
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 9e-07
Identities = 82/327 (25%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 97 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIALYFAH-LAKL 150
EP+GV+ +IP P T +F K AL +I P A++ + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151
Query: 151 AGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 208
AG P+G++ + P+ + H D+D + TG M AA S+ KP
Sbjct: 152 AGAPEGLIQWIEE--PSIELTQELMKHPDVDLILATGG-----PGMVKAAYSSGKPA--- 201
Query: 209 LG---GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+G G P I + D+ A +L F+ G IC + V V + IYDE +L ++
Sbjct: 202 IGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL-KR 260
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
A+ + + +K++ ++ L +G TL +GK I
Sbjct: 261 RGAYFLNEE-----------EKEKLEKALF------DDGGTL--NPDIVGKSAQKIAELA 301
Query: 326 FTNVTED--MLIAKNEIFG-----------PVMALMKFKTVEEAIKSAN-NTRYGLA--- 368
V ED +L+A+ G PV+A + + EEA++ A YG A
Sbjct: 302 GIEVPEDTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHT 361
Query: 369 AGIMTKDLNVANTVSRSIRAGIIWINC 395
A I + D V + + I +N
Sbjct: 362 AVIHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 70/315 (22%), Positives = 122/315 (38%), Gaps = 44/315 (13%)
Query: 92 GYTLRE--PIGVVGHIIPWNFPT-TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL- 147
G TL E P GV+G I P PT T+ +S LAAG ++ P ++ Y L
Sbjct: 89 GLTLVEYAPFGVIGAITPSTNPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELI 147
Query: 148 ---AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 204
AG PD ++ V + +H DI+ + TG V + + + K
Sbjct: 148 NKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSSG-----KK 202
Query: 205 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 264
G P+++ + D+ AA + G F+ C+A V + + D + +
Sbjct: 203 AIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM-Q 261
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI--- 321
+ A+V+ D Q ++ +L +GAT K +GK I
Sbjct: 262 RNGAYVLNDE---------QAEQLLEVVLL------TNKGATPNK--KWVGKDASKILKA 304
Query: 322 --------EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGI 371
I +D E P++ +++ K +EAI+ A +G A I
Sbjct: 305 AGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAII 364
Query: 372 MTKDLNVANTVSRSI 386
+K++ ++R++
Sbjct: 365 HSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 81/326 (24%), Positives = 132/326 (40%), Gaps = 59/326 (18%)
Query: 97 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIA---LYFAHLA 148
EP+GV+ I P P T +F K AL +I A+++ + A + A A
Sbjct: 107 EPVGVIAGITPTTNPTSTAIF--KALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA--A 162
Query: 149 KLAGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
AG P ++ + P+ A+ +H I + TG M AA S+ KP +
Sbjct: 163 VAAGAPKDIIQWIEE--PSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP-A 214
Query: 207 LELG-GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
L +G G P I D+ A + LL F+ G IC + V V + IYDE +++
Sbjct: 215 LGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH 274
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
A+ + + + K+ ++ + E+G +G+ Y I
Sbjct: 275 -GAYFL-----------NKKELKKLEKFIFGKENGALNADI-------VGQSAYKIAEMA 315
Query: 326 FTNVTED--MLIA------KNEIFG-----PVMALMKFKTVEEAIKSANN-TRYGLA--- 368
V ED +LIA ++E PV+A+ K K E+A++ A +G
Sbjct: 316 GFKVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHT 375
Query: 369 AGIMTKDLNVANTVSRSIRAGIIWIN 394
A I T D + ++A I +N
Sbjct: 376 AVIYTNDDELIKEFGLRMKACRILVN 401
|
Length = 862 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAKLAG 152
P+GVV +IP PT+ K ++ A ++ P + A+ AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 212
P+G + + + + D + TG + M AA S+ P G
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGG-----EAMVKAAYSSGTPAIGVGPGN 217
Query: 213 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 261
P I +V A + F+ G IC + + V+ + + +E +K+
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270
|
Length = 488 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.83 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.48 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.22 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.5 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 98.38 | |
| PLN02926 | 431 | histidinol dehydrogenase | 98.02 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.85 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.81 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.73 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.73 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.67 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.56 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 97.46 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.02 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 91.38 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 87.15 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-95 Score=705.63 Aligned_cols=436 Identities=56% Similarity=0.922 Sum_probs=418.7
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++++|+.|++ |+.++..+|.++|+++++.++++++.|+...+.+.|||..+++..|+..+++.++|++.
T Consensus 55 ~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag 134 (501)
T KOG2450|consen 55 ATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAG 134 (501)
T ss_pred ccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhcc
Confidence 45566666653 66789999999999999999999999999999999999998776999999999999999
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..++...+.......+..++|+|||..|.|||||++...|+++|||++||+||+||++++|+++..+++++.++|+|
T Consensus 135 ~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P 214 (501)
T KOG2450|consen 135 WADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFP 214 (501)
T ss_pred chhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCC
Confidence 99888777777667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|+++|.+.+.+.+|.+|++++.|+||||+.+|+.|.+.++...+|++++|+|||+|.||.+|+|++.|++.+..+.
T Consensus 215 ~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~i 294 (501)
T KOG2450|consen 215 PGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGI 294 (501)
T ss_pred cceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998677999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
|+|+||.|.+.+|+|||+++|++|++++++..++ +++|||.|+.+.+||++++.+++++.++|+.++++|+++++||.+
T Consensus 295 F~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~ 374 (501)
T KOG2450|consen 295 FFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVR 374 (501)
T ss_pred hcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcc
Confidence 9999999999999999999999999999999966 999999999999999999999999999999999999999999988
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
..+.|+|+.|||+.++.++|.+++||+||||+.|++|++.||+|+++|++.|||+++|||+|.++++++++++++|+|||
T Consensus 375 ~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwi 454 (501)
T KOG2450|consen 375 LGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWI 454 (501)
T ss_pred cCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEE
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCCC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 440 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~~ 440 (441)
|++.......||||+|+||+|++.|.+++.+||+.|+++++..++.|
T Consensus 455 N~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 455 NCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKNS 501 (501)
T ss_pred eccccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999987765
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-93 Score=733.29 Aligned_cols=437 Identities=80% Similarity=1.261 Sum_probs=409.8
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.
T Consensus 55 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 134 (501)
T PLN02766 55 GDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAG 134 (501)
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666652 66679999999999999999999999999999999999987555699999999999999
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+.+..+..++...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++|+|
T Consensus 135 ~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP 214 (501)
T PLN02766 135 AADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVP 214 (501)
T ss_pred HHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCC
Confidence 88776665443333445678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.+..|+.||++|.|.||||+.+|+.|.+.++...++|+++|+|||||+||++|||++.|++.+++++
T Consensus 215 ~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~ 294 (501)
T PLN02766 215 DGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGI 294 (501)
T ss_pred cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999887447899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||+++|++|+++|+++++++++|+|+++++++||++++.++++++++|++++.+|+++++||...
T Consensus 295 f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 374 (501)
T PLN02766 295 FYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC 374 (501)
T ss_pred HhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.+.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 375 ~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN 454 (501)
T PLN02766 375 GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVN 454 (501)
T ss_pred CCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCCCC
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~~~ 441 (441)
+.....+.+||||+|+||+|+++|.+++++||++|++++.+.+.||+
T Consensus 455 ~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~~~~~ 501 (501)
T PLN02766 455 CYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501 (501)
T ss_pred CCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEeccccccC
Confidence 98777788999999999999999999999999999999999999997
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-92 Score=724.20 Aligned_cols=429 Identities=37% Similarity=0.627 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 44 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~ 122 (482)
T PRK11241 44 KMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEE 122 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356677777763 56789999999999999999999999999999999999997 457999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+|
T Consensus 123 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP 202 (482)
T PRK11241 123 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIP 202 (482)
T ss_pred HHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCC
Confidence 776555433321 2445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++.+.+.++.|++||++|.|.||||+++|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 203 ~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa-~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~ 281 (482)
T PRK11241 203 AGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASK 281 (482)
T ss_pred cccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 99999999977778899999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 282 f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~ 361 (482)
T PRK11241 282 FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 361 (482)
T ss_pred HhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
..+|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||
T Consensus 362 ~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN 441 (482)
T PRK11241 362 ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGIN 441 (482)
T ss_pred CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEEC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.....+.+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 442 ~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 442 TGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 9877667789999999999999999999999999998764
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-91 Score=724.59 Aligned_cols=438 Identities=55% Similarity=0.931 Sum_probs=411.4
Q ss_pred CCCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 91 ~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a 170 (538)
T PLN02466 91 EGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYA 170 (538)
T ss_pred CCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 346677777764 5567899999999999999999999999999999999999765679999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.+.++..+..++...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+
T Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGl 250 (538)
T PLN02466 171 GWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGL 250 (538)
T ss_pred HHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCC
Confidence 88877766554433334568899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+||++++++.+.+..|+.||++|.|.||||+.+|+.|.+.+++..++|+++|+|||||+||++|||++.|++.++++
T Consensus 251 P~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~ 330 (538)
T PLN02466 251 PPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 330 (538)
T ss_pred CcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999997777889999999999999999999999999998744789999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+|+||.|++++++|||+++|++|+++|++++.++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 331 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~ 410 (538)
T PLN02466 331 LFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDR 410 (538)
T ss_pred HHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.++.|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+|
T Consensus 411 ~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~I 490 (538)
T PLN02466 411 FGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWV 490 (538)
T ss_pred CCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEE
Confidence 55578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCCCC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~~~ 441 (441)
|++...++.+||||+|.||+|+++|.+++++||+.|++++.+.++-|+
T Consensus 491 N~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 491 NCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred CCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCCC
Confidence 998777788999999999999999999999999999999999999996
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=710.85 Aligned_cols=428 Identities=47% Similarity=0.763 Sum_probs=401.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++.+|.++|+++++.|++++++|+.++++|+|||+.++ ..|+..+++.++++++.
T Consensus 32 ~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea-~~ei~~~~~~~~~~a~~ 110 (472)
T COG1012 32 AATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEE 110 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 345666666663 557799999999999999999999999999999999999974 55799999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~ 190 (472)
T COG1012 111 ARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPA 190 (472)
T ss_pred HHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCC
Confidence 98777665444446789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++.+.+.++.|+.||+++.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++|||++.|++.+++++|
T Consensus 191 Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa-~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f 269 (472)
T COG1012 191 GVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAF 269 (472)
T ss_pred CeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh-hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHH
Confidence 9999999977778999999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
+|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.|+.+++||++++.++++++++|++++++|+.+++||. .
T Consensus 270 ~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~-~ 347 (472)
T COG1012 270 FNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK-R 347 (472)
T ss_pred hCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-C
Confidence 999999999999999999999999999999 65 99999899999999999999999999999999999999999998 3
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.. |+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||
T Consensus 348 ~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN 426 (472)
T COG1012 348 PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGIN 426 (472)
T ss_pred CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEEC
Confidence 33 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 395 CYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 395 ~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+... ..+.+||||+|.||+|+++|.+++++|++.|++..+..
T Consensus 427 ~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 427 DYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred CCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 9864 45779999999999999999999999999999988754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=715.95 Aligned_cols=429 Identities=33% Similarity=0.457 Sum_probs=398.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||+.++ ..|+..+++.+++++++
T Consensus 147 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea-~~EV~~~i~~~~~~a~~ 225 (604)
T PLN02419 147 LTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGM 225 (604)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777764 567899999999999999999999999999999999999974 56999999999999998
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+....+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 226 a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP 305 (604)
T PLN02419 226 ATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305 (604)
T ss_pred HHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcC
Confidence 87665544332 23456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||+++|+ .+.++.|+.|++++.|.||||+.+|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++
T Consensus 306 ~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~ 383 (604)
T PLN02419 306 DGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAG 383 (604)
T ss_pred cceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 9999999985 467889999999999999999999999999987 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|++++|||||++ +++|+++|+++++++++|+|.|+++++||++++.+++++.+++++|+++|+++++||...
T Consensus 384 f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~ 462 (604)
T PLN02419 384 FGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDI 462 (604)
T ss_pred HhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999999999999753
Q ss_pred ----CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 315 ----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 315 ----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
.+.|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.
T Consensus 463 ~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~ 542 (604)
T PLN02419 463 VVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQ 542 (604)
T ss_pred cCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeee
Confidence 1368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFA-FDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~-~~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||+... ..+.+||||+|+||+| +++|.+++++||+.|+|+++..
T Consensus 543 V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 591 (604)
T PLN02419 543 IGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQK 591 (604)
T ss_pred EEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEccC
Confidence 99999743 3467999999999999 7999999999999999988753
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-90 Score=708.58 Aligned_cols=431 Identities=45% Similarity=0.792 Sum_probs=402.7
Q ss_pred CCCHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|+ .|+.+++++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 39 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 118 (486)
T cd07140 39 LATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA 118 (486)
T ss_pred CCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777 37778999999999999999999999999999999999999765579999999999999
Q ss_pred HhhhhhcCceeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 74 GAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 74 ~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
.+.++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 119 ~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ 198 (486)
T cd07140 119 GWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTV 198 (486)
T ss_pred HHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHH
Confidence 88877665543321 12235788999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++..+++|+++|+|||||+||++|+|++.|++.
T Consensus 199 ~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~ 278 (486)
T cd07140 199 KAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRM 278 (486)
T ss_pred HcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHH
Confidence 99999999999998777788999999999999999999999999999873378999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++
T Consensus 279 i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~ 358 (486)
T cd07140 279 GMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVY 358 (486)
T ss_pred HHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
||...+..|+|++|||+.+++++|.++++|+||||++|++|+ |++|||+++|+++|||++||||+|.+++++++++++
T Consensus 359 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~ 438 (486)
T cd07140 359 GGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLE 438 (486)
T ss_pred CCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCC
Confidence 997654578999999999999999999999999999999998 699999999999999999999999999999999999
Q ss_pred ceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 388 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 388 ~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|.|+||++....+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 439 ~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 439 AGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred cceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999877777899999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-91 Score=645.96 Aligned_cols=430 Identities=37% Similarity=0.634 Sum_probs=408.0
Q ss_pred CCCCHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 3 ILPSRQHVRRLITVH--------GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 3 ~~~~~~~~~~a~~~~--------~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
...+.++.+.||+.+ ..+..+|.++|+++.+.|.+|+++|++++++|.|||+.| +.+||.-+..+++||++
T Consensus 56 ~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~e-A~gEv~y~a~f~eWyAe 134 (503)
T KOG2451|consen 56 ADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGE-AKGEVAYSAAFFEWYAE 134 (503)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhh-ccceeehhHHHHHHHHH
Confidence 345667777777554 678999999999999999999999999999999999997 78999999999999999
Q ss_pred hhhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
++++..|...+. .+.....+.++|+||+.+|+|||||......+..+||++||+||+||+..+|+++..++++.+++|+
T Consensus 135 EA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGi 214 (503)
T KOG2451|consen 135 EARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGI 214 (503)
T ss_pred HhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCC
Confidence 999999887654 3667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCC---chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 154 PDGVLNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 154 P~~~v~~~~~~---~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
|+|++|+++++ ..+.++.|+.+|.|+.|+||||+.+|+.++.+.+ ...|++.+|+||+.|+||.+|||+|.|++..
T Consensus 215 P~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa-stvKkvslELGGNAPfIVFddadld~Av~g~ 293 (503)
T KOG2451|consen 215 PAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGA 293 (503)
T ss_pred CCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh-hhhhheehhhcCCCceEEecCcCHHHHHHHH
Confidence 99999999963 4578999999999999999999999999999988 8999999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
...+|.++||.|.+.+|+|||+++||+|+..|.++++++++||..|+++..||+|++.+.+++++++++|+.+|+++++|
T Consensus 294 mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~G 373 (503)
T KOG2451|consen 294 MACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILG 373 (503)
T ss_pred HHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcC-CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 311 GKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 311 g~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
|+.. +....|++|||+.+++.+|-+..||+|||+.+|.+|++.+|+|+++|+++.||++|+||+|..+..+++++|++|
T Consensus 374 Gk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvG 453 (503)
T KOG2451|consen 374 GKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVG 453 (503)
T ss_pred CeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcc
Confidence 9954 445599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
.|-+|.-.......||||.|+||+|++++.+|+++|+..|.+.+.
T Consensus 454 mVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 454 MVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred eeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence 999999888889999999999999999999999999999987654
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-90 Score=703.83 Aligned_cols=428 Identities=35% Similarity=0.605 Sum_probs=398.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 34 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~ 113 (472)
T TIGR03374 34 EASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGA 113 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777764 557899999999999999999999999999999999999975556999999999999887
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+.+.+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP 192 (472)
T TIGR03374 114 ARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FP 192 (472)
T ss_pred HHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CC
Confidence 76655432221 12445688999999999999999999999999999999999999999999999999999999885 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.++.|+.||++|.|.||||+++|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++
T Consensus 193 ~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~ 271 (472)
T TIGR03374 193 AGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA-PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFG 271 (472)
T ss_pred cCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcC-CeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~ 313 (441)
|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.++++++++|++++++| +++++||..
T Consensus 272 ~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~ 351 (472)
T TIGR03374 272 FYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEK 351 (472)
T ss_pred HhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 799999986
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
..+.|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+++.++++++++|.|+|
T Consensus 352 ~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~i 431 (472)
T TIGR03374 352 RKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWV 431 (472)
T ss_pred CCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 54468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|+.....+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 432 N~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 432 NTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred CCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 9988777889999999999999999999999999999865
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=696.59 Aligned_cols=413 Identities=24% Similarity=0.366 Sum_probs=382.9
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcC----ceecccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG----EVLKMSRAL 90 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~----~~~~~~~~~ 90 (441)
.|+.++.++|.++|+++++.|++|+++|+++++.|+|||..++...|+..+++.++++++.+++..+ .......+.
T Consensus 25 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (484)
T PLN02174 25 DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPA 104 (484)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCc
Confidence 4668899999999999999999999999999999999999876556999999999999998776544 111112234
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~ 170 (441)
..++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.++++++.+ ++|+|+|++++|. .+.+.
T Consensus 105 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~-~~~~~ 182 (484)
T PLN02174 105 SAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGA-VTETT 182 (484)
T ss_pred ceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECC-hHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999 6999999999984 44566
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh-hccCCCcccCceEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVY 249 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~-~~~Gq~C~~~~~v~ 249 (441)
.|+. +++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|++++|+|
T Consensus 183 ~l~~-~~vd~V~FTGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~ 260 (484)
T PLN02174 183 ALLE-QKWDKIFYTGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYIL 260 (484)
T ss_pred HHhc-ccCCEEEEECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEE
Confidence 6776 88999999999999999999988 889999999999999999999999999999999999 69999999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeC
Q 013526 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 329 (441)
Q Consensus 250 V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 329 (441)
||++++|+|+++|+++++++++|+|.+ ++++||++++.++++++++|+++ .+|+++++||... ..|+|++|||+.++
T Consensus 261 V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v 337 (484)
T PLN02174 261 TTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDV 337 (484)
T ss_pred EeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecC
Confidence 999999999999999999999999987 78999999999999999999998 7899999999764 36899999999999
Q ss_pred CCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCC--CCCCccC
Q 013526 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD--SDCPYGG 407 (441)
Q Consensus 330 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~--~~~p~GG 407 (441)
+++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|.|+||++.... +.+||||
T Consensus 338 ~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG 417 (484)
T PLN02174 338 PLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGG 417 (484)
T ss_pred CCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999986643 6789999
Q ss_pred CCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 408 YKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 408 ~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||+|+++|.+++++||+.|+|+++
T Consensus 418 ~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 418 VGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred cCccccCccchHHHHHHhcceEEEEEC
Confidence 999999999999999999999999876
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-89 Score=703.89 Aligned_cols=429 Identities=42% Similarity=0.659 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 58 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~Ev~~~i~~~~~~~~~ 136 (498)
T PLN02278 58 CMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEE 136 (498)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777764 557899999999999999999999999999999999999974 56999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+....+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..|.+++.++|+|
T Consensus 137 ~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP 216 (498)
T PLN02278 137 AKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIP 216 (498)
T ss_pred HHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCC
Confidence 877655444332 2345677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.|++++
T Consensus 217 ~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~ 295 (498)
T PLN02278 217 PGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAA-ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASK 295 (498)
T ss_pred cccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999877678899999999999999999999999999987 78899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||...
T Consensus 296 f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~ 375 (498)
T PLN02278 296 FRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH 375 (498)
T ss_pred hccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
..+|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus 376 ~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN 455 (498)
T PLN02278 376 SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVN 455 (498)
T ss_pred CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.....+.+||||.|.||+|+++|.+++++||+.|+++++
T Consensus 456 ~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 456 EGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred CCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 9777667899999999999999999999999999998764
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-89 Score=701.69 Aligned_cols=428 Identities=39% Similarity=0.676 Sum_probs=398.8
Q ss_pred CCHHHHHHHH---------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLI---------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~---------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+
T Consensus 34 ~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~ 113 (477)
T cd07113 34 ATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGW 113 (477)
T ss_pred CCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666664 2678899999999999999999999999999999999999975446999999999999988
Q ss_pred hhhhcCceeccc------cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS------RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~~~------~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
.....+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~ 193 (477)
T cd07113 114 ATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAK 193 (477)
T ss_pred HHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 776555433211 12346789999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|+||++++++. .+..|+.||++|.|.||||+.+|+.|.+.++ ..++|+++|+||+||+||++|||++.|++.
T Consensus 194 ~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~ 271 (477)
T cd07113 194 EAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEG 271 (477)
T ss_pred HcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hhcCceEeecCCCCeeEECCCCCHHHHHHH
Confidence 99999999999998665 8899999999999999999999999999987 789999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++
T Consensus 272 i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~ 351 (477)
T cd07113 272 LLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVR 351 (477)
T ss_pred HHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||....+.|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|
T Consensus 352 gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G 431 (477)
T cd07113 352 GGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAG 431 (477)
T ss_pred CCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 99765446899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||++....+.+||||.|+||+|+++|.+++++||+.|+|+++
T Consensus 432 ~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 432 TVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred eEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 999998877778899999999999999999999999999999765
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-89 Score=696.82 Aligned_cols=427 Identities=29% Similarity=0.449 Sum_probs=396.2
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.+++.+|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...
T Consensus 26 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~ 104 (462)
T PRK13968 26 AGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA-RAEVAKSANLCDWYAEHG 104 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4566776666 3567899999999999999999999999999999999999974 579999999999999887
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
.+..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.++.+++.++|+|+|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~g 184 (462)
T PRK13968 105 PAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQG 184 (462)
T ss_pred HHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcC
Confidence 65533221112345668899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
++|++++++.. ...++.||++|.|.||||+++|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++|+
T Consensus 185 v~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa-~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~ 262 (462)
T PRK13968 185 VYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ 262 (462)
T ss_pred cEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHh
Confidence 99999985543 456889999999999999999999999988 7899999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 316 (441)
|+||.|++++++|||++++++|+++|+++++++++|+|.++++++||+++..+++++++++++++.+|+++++||.....
T Consensus 263 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 342 (462)
T PRK13968 263 NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAG 342 (462)
T ss_pred ccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCc
Q 013526 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~ 396 (441)
.|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.
T Consensus 343 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~ 422 (462)
T PRK13968 343 AGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGY 422 (462)
T ss_pred CceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 397 FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 397 ~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 423 ~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 423 CASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 77778899999999999999999999999999999764
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-89 Score=701.17 Aligned_cols=428 Identities=59% Similarity=0.985 Sum_probs=400.4
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.
T Consensus 38 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 117 (476)
T cd07142 38 GDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAG 117 (476)
T ss_pred CCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46667766663 55679999999999999999999999999999999999997655699999999999998
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 118 ~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP 197 (476)
T cd07142 118 WADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLP 197 (476)
T ss_pred HHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcC
Confidence 88776655444322344578899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.+..|..||++|.|.||||+.+|+.|.+.++..+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 198 ~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~ 277 (476)
T cd07142 198 DGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFAL 277 (476)
T ss_pred cccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999977778899999999999999999999999999987338899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.++||.|+++++||||+++|++|+++|.++++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 278 f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~ 357 (476)
T cd07142 278 FFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI 357 (476)
T ss_pred hcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
...|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|+|+||
T Consensus 358 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN 437 (476)
T cd07142 358 GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVN 437 (476)
T ss_pred CCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
++....+.+||||.|+||+|+++|.+++++||+.|+++
T Consensus 438 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 438 CYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 98877888999999999999999999999999999875
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-89 Score=695.57 Aligned_cols=427 Identities=32% Similarity=0.528 Sum_probs=397.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|++++++|+|||+.++ ..|+..+++.+++++..
T Consensus 19 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 97 (457)
T PRK09406 19 ALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA-KAEALKCAKGFRYYAEH 97 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777764 557899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCceecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 76 ADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+++..+..... ..+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.++.+++.++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aG 177 (457)
T PRK09406 98 AEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAG 177 (457)
T ss_pred HHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhC
Confidence 87654432111 123456788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+|+++++ +.+.+..|+.|++++.|.||||+.+|+.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++
T Consensus 178 lP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~-~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~ 255 (457)
T PRK09406 178 FPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDPFIVMPSADLDRAAETAVT 255 (457)
T ss_pred CCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCceeeecCCCCeeEECCCCCHHHHHHHHHH
Confidence 99999999986 4456788999999999999999999999999887 789999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 256 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~ 335 (457)
T PRK09406 256 ARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGK 335 (457)
T ss_pred HHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.....|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 336 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 415 (457)
T PRK09406 336 RPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVF 415 (457)
T ss_pred cCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence 75557999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
||+.+...+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 416 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 416 INGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred ECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99988878889999999999999999999999999999865
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-89 Score=697.19 Aligned_cols=428 Identities=46% Similarity=0.777 Sum_probs=400.1
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..+
T Consensus 35 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~ 114 (475)
T cd07117 35 ATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVI 114 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666 36688999999999999999999999999999999999999865569999999999999887
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
.+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g 193 (475)
T cd07117 115 RAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKG 193 (475)
T ss_pred HHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcC
Confidence 665554333233445688999999999999999999999999999999999999999999999999999999986 9999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
++|++++++.+.+..|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|+
T Consensus 194 ~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~ 272 (475)
T cd07117 194 VVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILF 272 (475)
T ss_pred cEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhh
Confidence 999999877778899999999999999999999999999887 8899999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC-
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 315 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~- 315 (441)
|+||.|+++++||||++++++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++||....
T Consensus 273 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~ 352 (475)
T cd07117 273 NQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTE 352 (475)
T ss_pred ccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred ---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 316 ---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
+.|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+++.++++++++|+|+
T Consensus 353 ~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 432 (475)
T cd07117 353 NGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVW 432 (475)
T ss_pred ccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
||+++...+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 433 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 433 VNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred ECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999877778899999999999999999999999999998765
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-89 Score=700.14 Aligned_cols=429 Identities=55% Similarity=0.896 Sum_probs=401.7
Q ss_pred CCHHHHHHHH-----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI-----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 5 ~~~~~~~~a~-----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.+++++
T Consensus 41 ~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a 120 (481)
T cd07141 41 GDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYA 120 (481)
T ss_pred CCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 4555666555 26778999999999999999999999999999999999997666679999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.++++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+
T Consensus 121 ~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGl 200 (481)
T cd07141 121 GWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGF 200 (481)
T ss_pred HHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCc
Confidence 98877766544433334567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++++.+.+..|+.||++|.|.||||+.+++.|.+.++..+++|+++|+|||||+||++|||++.|++.|+++
T Consensus 201 P~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~ 280 (481)
T cd07141 201 PPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEA 280 (481)
T ss_pred CccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHH
Confidence 99999999997777889999999999999999999999999988733889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+++||.|+++++||||+++|++|+++|++.++++++|+|+|+++++||++++.+++++.+++++++.+|+++++||..
T Consensus 281 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 360 (481)
T cd07141 281 LFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKR 360 (481)
T ss_pred HHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.++.|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 361 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~i 440 (481)
T cd07141 361 HGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWV 440 (481)
T ss_pred CCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEE
Confidence 65578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|++....+.+||||.|+||+|+++|.+++++||+.|++++
T Consensus 441 N~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 441 NCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred CCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 9987777889999999999999999999999999999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=699.66 Aligned_cols=429 Identities=44% Similarity=0.746 Sum_probs=400.4
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++..
T Consensus 41 ~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~ 120 (488)
T PRK13252 41 ATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLA 120 (488)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666655 45678999999999999999999999999999999999999765569999999999999888
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
+...+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|
T Consensus 121 ~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g 200 (488)
T PRK13252 121 PALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200 (488)
T ss_pred HHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcc
Confidence 76655544333345568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+||++++++. .++.|+.||++|.|.||||+++|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++|+
T Consensus 201 ~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~ 278 (488)
T PRK13252 201 VFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFY 278 (488)
T ss_pred cEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHh
Confidence 9999998665 8899999999999999999999999999887 7799999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC-
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 315 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~- 315 (441)
++||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||....
T Consensus 279 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 358 (488)
T PRK13252 279 SSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTE 358 (488)
T ss_pred hcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999996432
Q ss_pred ---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 316 ---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+
T Consensus 359 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~ 438 (488)
T PRK13252 359 GGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICW 438 (488)
T ss_pred ccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEE
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++....+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 439 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 439 INTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred ECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 9997776778999999999999999999999999999998865
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-88 Score=696.41 Aligned_cols=429 Identities=47% Similarity=0.782 Sum_probs=401.9
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++|+ .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..
T Consensus 35 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~ 114 (480)
T cd07559 35 STAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVI 114 (480)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666665 36788999999999999999999999999999999999999765579999999999999887
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
....+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~g 193 (480)
T cd07559 115 RAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKG 193 (480)
T ss_pred HHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcC
Confidence 766554433334556788999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC-----CHHHHHHHHH
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMAL 231 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da-----d~~~aa~~i~ 231 (441)
++|++++++.+.+..|+.||++|.|.||||+.+|+.|.+.++ ..++|+++|+||+||+||++|| |++.|++.++
T Consensus 194 vv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~ 272 (480)
T cd07559 194 VVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQ 272 (480)
T ss_pred eEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHH
Confidence 999999977788999999999999999999999999999987 7899999999999999999999 9999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|+++||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||
T Consensus 273 ~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg 352 (480)
T cd07559 273 LGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGG 352 (480)
T ss_pred HHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 312 KPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 312 ~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
.... ..|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+++.+++++++
T Consensus 353 ~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~ 432 (480)
T cd07559 353 ERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQ 432 (480)
T ss_pred CcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcC
Confidence 7643 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 388 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 388 ~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+|+||++....+.+||||+|+||+|+++|.+++++||+.|++++++
T Consensus 433 ~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 480 (480)
T cd07559 433 TGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVSY 480 (480)
T ss_pred cceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 999999988777788999999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-88 Score=696.37 Aligned_cols=430 Identities=38% Similarity=0.662 Sum_probs=398.6
Q ss_pred CCCHHHHHHHH--------H-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI--------T-VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~--------~-~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|+ . |+.++..+|.++|+++++.|++++++|++++++|+|||..+....|+..+++.++++++
T Consensus 32 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~ 111 (481)
T TIGR03216 32 EAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFAD 111 (481)
T ss_pred CCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHH
Confidence 34556666654 2 77889999999999999999999999999999999999997655699999999999998
Q ss_pred hhhhhcCceeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 75 ~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
.++...+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~ 191 (481)
T TIGR03216 112 VVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA 191 (481)
T ss_pred HHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 8766544433211 123457889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCch-hHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 151 aglP~~~v~~~~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
+|+|+|+++++++.+. +.+..|..||++|.|.||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.
T Consensus 192 aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~ 270 (481)
T TIGR03216 192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAG 270 (481)
T ss_pred cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHH
Confidence 9999999999998554 47888999999999999999999999999987 788999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||++++++|+++|.++++++++|+|.|+++++||++++.+++++++++++++++|+++++
T Consensus 271 i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 350 (481)
T TIGR03216 271 ILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVT 350 (481)
T ss_pred HHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCC-----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH
Q 013526 310 GGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384 (441)
Q Consensus 310 gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 384 (441)
||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++
T Consensus 351 gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 430 (481)
T TIGR03216 351 GGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVAR 430 (481)
T ss_pred CCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 997532 368999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 385 ~l~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++++|.|+||+.....+.+||||.|+||+|+++|.+++++||+.|+++++
T Consensus 431 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 431 QMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred hcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999887778899999999999999999999999999999775
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-88 Score=691.95 Aligned_cols=424 Identities=39% Similarity=0.650 Sum_probs=395.9
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~~~~ 93 (448)
T TIGR01780 15 DQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKE-AKGEILYAASFLEWFAEE 93 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 34566666655 455789999999999999999999999999999999999997 567999999999999887
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++..+...+.. .+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP 173 (448)
T TIGR01780 94 AKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIP 173 (448)
T ss_pred HHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCC
Confidence 766655443322 3445567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCC-chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 155 DGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 155 ~~~v~~~~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
+|++|++++. +.+.++.|+.||+++.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|+|++.|++.++++
T Consensus 174 ~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~ 252 (448)
T TIGR01780 174 KGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIVFDDADIDQAVEGAMAS 252 (448)
T ss_pred ccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHH
Confidence 9999999986 5778899999999999999999999999999987 7789999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||..
T Consensus 253 ~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~ 332 (448)
T TIGR01780 253 KFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR 332 (448)
T ss_pred HHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
....|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 333 ~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~i 412 (448)
T TIGR01780 333 HELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGI 412 (448)
T ss_pred CCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEE
Confidence 54468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhcc
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k 429 (441)
|+.....+.+||||+|+||+|+++|.+++++||+.|
T Consensus 413 N~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 413 NTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred CCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 998777778999999999999999999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-88 Score=692.19 Aligned_cols=430 Identities=54% Similarity=0.869 Sum_probs=401.9
Q ss_pred CCHHHHHHHH---------Hhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI---------TVH-GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~---------~~~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
++.+++++|+ .|+ .++.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.+++++.
T Consensus 41 ~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~ 120 (481)
T cd07143 41 ATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGG 120 (481)
T ss_pred CCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 4556666654 377 789999999999999999999999999999999999976666799999999999999
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|
T Consensus 121 ~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP 200 (481)
T cd07143 121 WADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFP 200 (481)
T ss_pred HHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcC
Confidence 88766554433333445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.+..|+.||.+|.|.||||+.+|+.|.+.++...++|+++|+||+||+||++|||++.|++.+++++
T Consensus 201 ~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~ 280 (481)
T cd07143 201 PGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGI 280 (481)
T ss_pred cccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999977778899999999999999999999999999887337899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||++++++|+++|.++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...
T Consensus 281 ~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 360 (481)
T cd07143 281 FFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH 360 (481)
T ss_pred HhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.+.|+|+.|||+.+++++++++++|+||||++|++|+|.+|||+++|.+++||++||||+|.+.+.++++++++|+|+||
T Consensus 361 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 440 (481)
T cd07143 361 GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVN 440 (481)
T ss_pred CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEEC
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 441 ~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 441 CYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred CCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 9887778899999999999999999999999999999865
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-88 Score=687.80 Aligned_cols=427 Identities=38% Similarity=0.605 Sum_probs=398.5
Q ss_pred CCCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|++ |+. ++.+|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++
T Consensus 15 ~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~Ev~~~i~~l~~~~ 92 (455)
T cd07120 15 DGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEA-RFEISGAISELRYYA 92 (455)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHH
Confidence 356667766663 554 78999999999999999999999999999999999975 569999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH-cC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AG 152 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~-ag 152 (441)
..+++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.+ +|
T Consensus 93 ~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag 172 (455)
T cd07120 93 GLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPS 172 (455)
T ss_pred HHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcC
Confidence 88877655543333345678999999999999999999999999999999999999999999999999999999999 79
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++++.+.+..|+.||+++.|.||||+.+++.|.+.++ ++++|+++|+||+||+||++|+|++.|++.|++
T Consensus 173 ~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~ 251 (455)
T cd07120 173 LPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLER 251 (455)
T ss_pred CCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeeEECCCCCHHHHHHHHHH
Confidence 9999999999877778999999999999999999999999999987 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.++||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 252 ~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~ 331 (455)
T cd07120 252 ALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGG 331 (455)
T ss_pred HHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCC---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 313 PIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 313 ~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
... ..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|.++|||+++|||+|.+.++++++++++|
T Consensus 332 ~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G 411 (455)
T cd07120 332 PVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAG 411 (455)
T ss_pred cCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcc
Confidence 433 26899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
+|+||++....+.+||||+|+||+|+++|++++++||+.|++++
T Consensus 412 ~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 412 TVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred eEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999988777889999999999999999999999999999853
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-88 Score=692.41 Aligned_cols=428 Identities=27% Similarity=0.446 Sum_probs=396.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||+.++ ..|+..+++.++++++.
T Consensus 52 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~ 130 (508)
T PLN02315 52 EASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGL 130 (508)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777774 668899999999999999999999999999999999999975 67999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHH----HHHHHHH
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY----FAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~----l~~~l~~ 150 (441)
++++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.. +.+++.+
T Consensus 131 ~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~ 210 (508)
T PLN02315 131 SRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEK 210 (508)
T ss_pred HHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHH
Confidence 777655443332 23445678999999999999999999999999999999999999999999998887 6788899
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++ +.+.+..|..||++|.|.||||+.+|+.|.+.++ .+.+|+++|+|||||+||++|||++.|++.+
T Consensus 211 aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i 288 (508)
T PLN02315 211 NNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSV 288 (508)
T ss_pred cCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHH
Confidence 9999999999998 7778999999999999999999999999999887 7789999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++++|||+++||+|+++|+++++++++|+|.++++.+||++++.+++++.+++++++++|+++++|
T Consensus 289 ~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~g 368 (508)
T PLN02315 289 LFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTG 368 (508)
T ss_pred HHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH--hccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR--SIRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~--~l~~ 388 (441)
|...+..|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++ ++++
T Consensus 369 G~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~ 447 (508)
T PLN02315 369 GSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDC 447 (508)
T ss_pred CCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccce
Confidence 9865457899999999 699999999999999999999999999999999999999999999999999999995 7999
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 448 G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 448 GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred eEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 9999998655 3467899999999999999999999999999988875
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-88 Score=688.35 Aligned_cols=429 Identities=51% Similarity=0.856 Sum_probs=403.1
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.
T Consensus 16 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~ 95 (453)
T cd07115 16 ASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWA 95 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666665 45578999999999999999999999999999999999999865569999999999999888
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|++
T Consensus 96 ~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~ 175 (453)
T cd07115 96 DKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAG 175 (453)
T ss_pred HHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCch
Confidence 77665544433455678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ .+.+|+++|+||++|+||++|||++.|++.|++++|+
T Consensus 176 ~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~ 254 (453)
T cd07115 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFY 254 (453)
T ss_pred heEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHh
Confidence 999999977778899999999999999999999999999887 7889999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 316 (441)
|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.....
T Consensus 255 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 334 (453)
T cd07115 255 NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGA 334 (453)
T ss_pred ccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCc
Q 013526 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~ 396 (441)
.|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|.+++||++||||+|.+.++++++++++|+|+||++
T Consensus 335 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~ 414 (453)
T cd07115 335 RGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTY 414 (453)
T ss_pred CCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 397 FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 397 ~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+...+.+||||.|+||+|+++|.+++++||+.|+++++
T Consensus 415 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 415 NRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred CCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 87888899999999999999999999999999998765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=692.76 Aligned_cols=430 Identities=45% Similarity=0.739 Sum_probs=402.8
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.
T Consensus 32 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~ 110 (482)
T cd07119 32 GTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAG 110 (482)
T ss_pred CCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 45666666654 666899999999999999999999999999999999999975 5699999999999998
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP 190 (482)
T cd07119 111 LATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLP 190 (482)
T ss_pred HHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCC
Confidence 88766555443334556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+.+|+++|+||+||+||++|||++.|++.+++++
T Consensus 191 ~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~ 269 (482)
T cd07119 191 AGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVKKVALELGGKNPNIVFADADFETAVDQALNGV 269 (482)
T ss_pred cCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999999877678899999999999999999999999999987 78899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+++||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 270 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 349 (482)
T cd07119 270 FFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRP 349 (482)
T ss_pred HhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred C----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 315 G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 315 ~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
. ..|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 350 ~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~ 429 (482)
T cd07119 350 TGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGT 429 (482)
T ss_pred ccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcce
Confidence 2 258999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||+.....+.+||||.|+||+|+++|++++++||+.|++++++.
T Consensus 430 v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~~ 475 (482)
T cd07119 430 VWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLS 475 (482)
T ss_pred EEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecC
Confidence 9999987777889999999999999999999999999999998874
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=691.05 Aligned_cols=419 Identities=45% Similarity=0.755 Sum_probs=394.2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCcee-cc--c-cccc
Q 013526 16 VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQ 91 (441)
Q Consensus 16 ~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~-~~~~ 91 (441)
|+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+++++.+... +. + .+..
T Consensus 66 W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 144 (503)
T PLN02467 66 WARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEA-AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFK 144 (503)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCce
Confidence 566799999999999999999999999999999999999975 56999999999999998877655431 11 1 1334
Q ss_pred cceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHH
Q 013526 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAA 171 (441)
Q Consensus 92 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~ 171 (441)
.+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.
T Consensus 145 ~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~ 224 (503)
T PLN02467 145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAP 224 (503)
T ss_pred eEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999977778999
Q ss_pred HHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEe
Q 013526 172 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 251 (441)
Q Consensus 172 l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~ 251 (441)
|+.||.+|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 225 L~~~~~v~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~ 303 (503)
T PLN02467 225 LASHPGVDKIAFTGSTATGRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVH 303 (503)
T ss_pred HhcCCCCCEEEEECCHHHHHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEc
Confidence 999999999999999999999999987 7899999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC--CCCceeecEEEeeC
Q 013526 252 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNV 329 (441)
Q Consensus 252 ~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~ 329 (441)
++++++|+++|+++++++++|+|.|+++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.++
T Consensus 304 ~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v 383 (503)
T PLN02467 304 ERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDV 383 (503)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999997642 36899999999999
Q ss_pred CCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCCCCCCccCCC
Q 013526 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 409 (441)
Q Consensus 330 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p~GG~~ 409 (441)
+++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||.|
T Consensus 384 ~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k 463 (503)
T PLN02467 384 TTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIK 463 (503)
T ss_pred CCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987666789999999
Q ss_pred CCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 410 MSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 410 ~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
.||+|+++|.+++++||+.|++++...
T Consensus 464 ~SG~G~~~G~~~l~~ft~~k~i~~~~~ 490 (503)
T PLN02467 464 RSGFGRELGEWGLENYLSVKQVTKYIS 490 (503)
T ss_pred cCcCCCcchHHHHHHhhCeEEEEEecC
Confidence 999999999999999999999988653
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=693.39 Aligned_cols=429 Identities=42% Similarity=0.695 Sum_probs=399.7
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 112 (488)
T TIGR02299 34 RGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQT-RQQVIRAAENFRFFADK 112 (488)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHh
Confidence 35566666655 4667899999999999999999999999999999999999975 47999999999999887
Q ss_pred hhh-hcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++ ..+..++.. +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++|+|
T Consensus 113 ~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP 191 (488)
T TIGR02299 113 CEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLP 191 (488)
T ss_pred HHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcC
Confidence 763 334433322 345678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++++.++.|+.||.+|.|.||||+.+|+.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++
T Consensus 192 ~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa-~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~ 270 (488)
T TIGR02299 192 DGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA-DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMI 270 (488)
T ss_pred hhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999877778889999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++.+||++++.+++++++++++++++|+++++||...
T Consensus 271 ~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 350 (488)
T TIGR02299 271 FSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERA 350 (488)
T ss_pred HhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999763
Q ss_pred C-------CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 315 G-------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 315 ~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
. .+|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.+++++++++
T Consensus 351 ~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~ 430 (488)
T TIGR02299 351 PTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALE 430 (488)
T ss_pred cccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC
Confidence 2 258899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 388 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 388 ~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|.|+||+.....+.+||||+|+||+|+++|.+++++||+.|++++++
T Consensus 431 ~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 431 AGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred cCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 999999998777778999999999999999999999999999998876
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-87 Score=690.76 Aligned_cols=430 Identities=38% Similarity=0.636 Sum_probs=401.2
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 35 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 114 (475)
T PRK13473 35 EASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGA 114 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566776666 4567899999999999999999999999999999999999875556999999999999887
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++.+.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|
T Consensus 115 ~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP 193 (475)
T PRK13473 115 ARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LP 193 (475)
T ss_pred HHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CC
Confidence 77665432221 12345678899999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.+..|+.|+++|.|.||||+++++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++
T Consensus 194 ~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~ 272 (475)
T PRK13473 194 PGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFG 272 (475)
T ss_pred cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999987 78899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcC-CeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~ 313 (441)
|+|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++++++++++++| +++++||..
T Consensus 273 f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~ 352 (475)
T PRK13473 273 YYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEA 352 (475)
T ss_pred HhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999987
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
..+.|+|++|||+.++++++.++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.++++++++++++|+|+|
T Consensus 353 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~i 432 (475)
T PRK13473 353 PDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWV 432 (475)
T ss_pred CCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 54468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 433 N~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 433 NTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred CCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 998877788999999999999999999999999999998765
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=690.55 Aligned_cols=427 Identities=42% Similarity=0.675 Sum_probs=398.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.+++++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 33 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~ 111 (473)
T cd07097 33 RASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGE 111 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35667777766 4567899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..+..+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|
T Consensus 112 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP 191 (473)
T cd07097 112 ALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLP 191 (473)
T ss_pred HHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCC
Confidence 87765543332 13456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.+..|+.|+++|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 192 ~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~ 270 (473)
T cd07097 192 AGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGA 270 (473)
T ss_pred CcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 99999999977778999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 271 ~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 350 (473)
T cd07097 271 FFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL 350 (473)
T ss_pred HhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred C--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 315 G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 315 ~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
. +.|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+
T Consensus 351 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~ 430 (473)
T cd07097 351 KRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVM 430 (473)
T ss_pred CCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence 3 35889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC-CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEE
Q 013526 393 INCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~-~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~ 432 (441)
||+... ..+.+||||.|.||+| +++|.+++++||+.|+|+
T Consensus 431 iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 431 VNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred ECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 998765 3468999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-87 Score=687.32 Aligned_cols=428 Identities=43% Similarity=0.706 Sum_probs=400.0
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~a~~ 93 (456)
T cd07107 15 AASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSA-MLGDVMVAAALLDYFAGL 93 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 34566666666 455789999999999999999999999999999999999997 567999999999999987
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
...+.+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~ 172 (456)
T cd07107 94 VTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPP 172 (456)
T ss_pred HHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCc
Confidence 7666665554444556788999999999999999999999999999999999999999999999999999999996 999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH-
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI- 234 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~- 234 (441)
|+||++++++.+.++.|+.||+++.|.||||+++|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++
T Consensus 173 gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~ 251 (456)
T cd07107 173 GVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAA-EGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMN 251 (456)
T ss_pred CcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhch
Confidence 9999999877678899999999999999999999999999987 78999999999999999999999999999999995
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.++||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||...
T Consensus 252 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 331 (456)
T cd07107 252 FTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRP 331 (456)
T ss_pred hhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999753
Q ss_pred C----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 315 G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 315 ~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
. ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.
T Consensus 332 ~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~ 411 (456)
T cd07107 332 EGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGY 411 (456)
T ss_pred ccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCE
Confidence 2 358999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|+||++....+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 412 v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 412 VWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred EEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 99999888778899999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-88 Score=676.41 Aligned_cols=406 Identities=35% Similarity=0.595 Sum_probs=383.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceeccc-cccccceeecccceEEEEC
Q 013526 28 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 106 (441)
Q Consensus 28 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 106 (441)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+++...+...+.. .+...+.+++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999975 57999999999999998877655433222 3456788999999999999
Q ss_pred CCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCC
Q 013526 107 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 186 (441)
Q Consensus 107 p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs 186 (441)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+++|.|.||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHH
Q 013526 187 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266 (441)
Q Consensus 187 ~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~ 266 (441)
+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++++|+++|++++
T Consensus 160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCC-CCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceE
Q 013526 267 KAWVVGDPFDP-AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 345 (441)
Q Consensus 267 ~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 345 (441)
+++++|+|.++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|+++++|+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 89999999999999999999999999999999998765568999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 013526 346 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 425 (441)
Q Consensus 346 ~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~ 425 (441)
+|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.....+..||||+|+||+|+++|.+++++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887666789999999999999999999999
Q ss_pred hhccEEEEeC
Q 013526 426 LQVKSVVTPI 435 (441)
Q Consensus 426 t~~k~v~~~~ 435 (441)
|+.|++++++
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999998764
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=691.16 Aligned_cols=429 Identities=51% Similarity=0.850 Sum_probs=401.0
Q ss_pred CCHHHHHHHH---------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLI---------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~---------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.+++++++
T Consensus 42 ~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 121 (484)
T cd07144 42 AGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGW 121 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666664 2567899999999999999999999999999999999998765567999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 122 ~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~ 201 (484)
T cd07144 122 ADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPP 201 (484)
T ss_pred HHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCC
Confidence 87775554443334456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.+..|+.||++|.|.||||+.+++.|.+.++ ..++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 202 gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f 280 (484)
T cd07144 202 GVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIM 280 (484)
T ss_pred CcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH
Confidence 9999999977778999999999999999999999999999887 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
+|+||.|+++++||||+++|++|+++|++++++ +++|+|.++++++||++++.+++++.+++++++++|+++++||...
T Consensus 281 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 360 (484)
T cd07144 281 YNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKA 360 (484)
T ss_pred hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 999999999999999999999999999999985 8999999999999999999999999999999999999999999765
Q ss_pred C---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 315 G---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 315 ~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
. +.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 361 ~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v 440 (484)
T cd07144 361 PEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMV 440 (484)
T ss_pred cccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEE
Confidence 3 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+||++....+.+||||.|+||+|+++|.+++++||+.|+++++
T Consensus 441 ~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 441 WINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred EECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999877778899999999999999999999999999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=681.92 Aligned_cols=414 Identities=37% Similarity=0.582 Sum_probs=391.9
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcC-ceeccccccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRALQGY 93 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 93 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++... ..++.+ +...+
T Consensus 14 ~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 91 (429)
T cd07100 14 AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYYAENAEAFLADEPIETD-AGKAY 91 (429)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeeccCC-CceEE
Confidence 5889999999999999999999999999999999999999975 56999999999999988877643 333322 45578
Q ss_pred eeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH
Q 013526 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 173 (441)
Q Consensus 94 ~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~ 173 (441)
.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|.+++.++|+|+|+++++++++ +....|+
T Consensus 92 ~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~ 170 (429)
T cd07100 92 VRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAII 170 (429)
T ss_pred EEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999999854 5678899
Q ss_pred hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc
Q 013526 174 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 253 (441)
Q Consensus 174 ~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~ 253 (441)
.|++++.|.||||+++++.|.+.++ ..+||+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++
T Consensus 171 ~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~ 249 (429)
T cd07100 171 ADPRVRGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHED 249 (429)
T ss_pred cCCCCCEEEEECcHHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHH
Confidence 9999999999999999999999987 788999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCc
Q 013526 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 254 ~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 333 (441)
+|++|+++|+++++++++|+|+|+++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|
T Consensus 250 i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~ 329 (429)
T cd07100 250 VYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGM 329 (429)
T ss_pred HHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999997654468999999999999999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCCCCCCccCCCCCCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF 413 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p~GG~~~SG~ 413 (441)
+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|+||+
T Consensus 330 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~ 409 (429)
T cd07100 330 PAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGY 409 (429)
T ss_pred HHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999887778899999999999
Q ss_pred CCcchHHHHHhhhhccEEE
Q 013526 414 GRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 414 g~~~g~~~l~~~t~~k~v~ 432 (441)
|+++|.+++++||+.|+++
T Consensus 410 G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 410 GRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCcchHHHHHHhcceeEEe
Confidence 9999999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-87 Score=690.90 Aligned_cols=428 Identities=57% Similarity=0.941 Sum_probs=401.2
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.++++++++ |+.++.++|.++|+++++.|.+++++|++++++|+|||..++...|+..+++.++++++
T Consensus 38 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~ 117 (476)
T cd07091 38 ADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAG 117 (476)
T ss_pred CCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666553 44789999999999999999999999999999999999976666799999999999998
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+.++..+...+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP 197 (476)
T cd07091 118 WADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFP 197 (476)
T ss_pred HHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcC
Confidence 87766555444334556788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.+..|..|+++|.|.||||+.+++.|.+.++..+++|+++|+||+||+||++|||++.|++.|++++
T Consensus 198 ~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~ 277 (476)
T cd07091 198 PGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGI 277 (476)
T ss_pred CCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999977778899999999999999999999999999987338899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...
T Consensus 278 ~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~ 357 (476)
T cd07091 278 FFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERH 357 (476)
T ss_pred HhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.+.|+|++|||+.+++++++++++|+||||++|++|+|++||++++|++++||++||||+|.+.++++++++++|+|+||
T Consensus 358 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN 437 (476)
T cd07091 358 GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVN 437 (476)
T ss_pred CCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEEC
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+.+...+.+||||.|+||+|+++|.+++++||+.|+++
T Consensus 438 ~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 438 TYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred CCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 98777888999999999999999999999999999875
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-87 Score=683.70 Aligned_cols=428 Identities=39% Similarity=0.637 Sum_probs=400.1
Q ss_pred CCHHHHHHHH--------Hhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLI--------TVH-GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+.+++++|+ .|+ .+++.+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 16 ~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~ 95 (459)
T cd07089 16 AGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADL 95 (459)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666 355 7899999999999999999999999999999999999866667999999999999998
Q ss_pred hhhhcCce-eccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+.+..+.. ++.. .+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~ 175 (459)
T cd07089 96 ADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAE 175 (459)
T ss_pred HHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 87765443 2221 245678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+++++++++++.+..|+.||+++.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|+|++.|++.|
T Consensus 176 aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n~~iV~~dadl~~aa~~i 254 (459)
T cd07089 176 TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAA 254 (459)
T ss_pred cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeeEECCCCCHHHHHHHH
Confidence 999999999999977778899999999999999999999999999987 7889999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++|
T Consensus 255 ~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~g 334 (459)
T cd07089 255 VGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTG 334 (459)
T ss_pred HHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 311 GKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 311 g~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
|.... +.|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 335 g~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~ 414 (459)
T cd07089 335 GGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRT 414 (459)
T ss_pred CCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCc
Confidence 97643 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|+|+||+.....+..||||+|+||+|+++|.+++++||+.|++++
T Consensus 415 G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 415 GSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred CeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 999999988777889999999999999999999999999998763
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-87 Score=684.57 Aligned_cols=425 Identities=38% Similarity=0.603 Sum_probs=396.9
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++...
T Consensus 29 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~Ev~~~~~~~~~~~~~~ 107 (465)
T cd07151 29 ASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFP 107 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHhH
Confidence 4556666665 456789999999999999999999999999999999999997 4569999999999999887
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcCCC
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVP 154 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~aglP 154 (441)
++..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ .++.+++.++|+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P 187 (465)
T cd07151 108 LRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLP 187 (465)
T ss_pred HHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcC
Confidence 66655443322 355678899999999999999999999999999999999999999999999996 7899999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++++.+.+..|+.||.++.|.||||+.+|+.|.+.++ ...+|+++|+|||||+||++|+|++.|++.+++++
T Consensus 188 ~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~ 266 (465)
T cd07151 188 KGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAG-RHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGK 266 (465)
T ss_pred ccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999877778899999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||+++|++|+++|++.++++++|+|.++++.+||++++.+++++++++++++.+|+++++||..
T Consensus 267 f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~- 345 (465)
T cd07151 267 FLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA- 345 (465)
T ss_pred HhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.++++++++++++|+|+||
T Consensus 346 --~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 423 (465)
T cd07151 346 --EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHIN 423 (465)
T ss_pred --CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEEC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.+.. .+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 424 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 424 DQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred CCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 98765 46799999999999999999999999999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-87 Score=684.57 Aligned_cols=426 Identities=46% Similarity=0.764 Sum_probs=397.7
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.+++++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+
T Consensus 16 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~ 94 (456)
T cd07110 16 ATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLA 94 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666554 4567899999999999999999999999999999999999974 569999999999999888
Q ss_pred hhhcC---ceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 77 DKIHG---EVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 77 ~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+++.. ...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aG 174 (456)
T cd07110 95 EQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAG 174 (456)
T ss_pred HHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcC
Confidence 76532 222222 34567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+|+++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.|++
T Consensus 175 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~ 253 (456)
T cd07110 175 LPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPIIVFDDADLEKAVEWAMF 253 (456)
T ss_pred CCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHH
Confidence 9999999999977778899999999999999999999999999987 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+++||.|++++++|||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||.
T Consensus 254 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~ 333 (456)
T cd07110 254 GCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGR 333 (456)
T ss_pred HHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 313 PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 313 ~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
... +.|+|+.|||+.+++++|.++++|+||||++|++|+|.+||++++|+++|||+++|||+|.++++++++++++|+
T Consensus 334 ~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~ 413 (456)
T cd07110 334 RPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGI 413 (456)
T ss_pred cccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 643 468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
|+||++....+.+||||.|+||+|+++|++++++||+.|+++
T Consensus 414 v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 414 VWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred EEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999998777788999999999999999999999999999875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-87 Score=683.86 Aligned_cols=429 Identities=42% Similarity=0.728 Sum_probs=401.7
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++++ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+ ...|+..+++.+++++++
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~ 93 (457)
T cd07090 15 CAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEE-ARVDIDSSADCLEYYAGL 93 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 45667777766 455789999999999999999999999999999999999986 567999999999999988
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+...+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~ 173 (457)
T cd07090 94 APTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPD 173 (457)
T ss_pred HHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCc
Confidence 87765554444445677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|+++++ .+.++.|+.|++++.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 174 g~~~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~ 251 (457)
T cd07090 174 GVFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANF 251 (457)
T ss_pred ccEEEEeCC-hhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 999999984 468899999999999999999999999999987 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||....
T Consensus 252 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 331 (457)
T cd07090 252 LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVV 331 (457)
T ss_pred hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred -----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 316 -----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 316 -----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
++|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 332 ~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~ 411 (457)
T cd07090 332 PEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGT 411 (457)
T ss_pred ccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCe
Confidence 358999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+||+.....+.+||||+|.||+|+++|.+++++||+.|++.++.
T Consensus 412 v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 412 CWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred EEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 999998777788999999999999999999999999999997754
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-87 Score=686.29 Aligned_cols=427 Identities=35% Similarity=0.527 Sum_probs=395.2
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++|+ .|+.+++++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++...
T Consensus 35 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~~ 113 (478)
T cd07085 35 ATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIP 113 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4556666555 466889999999999999999999999999999999999997 4679999999999998876
Q ss_pred hhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 114 ~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~ 193 (478)
T cd07085 114 HLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPD 193 (478)
T ss_pred HHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCC
Confidence 6555544332 234457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++ +.+.+..|+.||+++.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 194 gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~ 271 (478)
T cd07085 194 GVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA-ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAF 271 (478)
T ss_pred CcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 99999998 4567899999999999999999999999999887 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||....
T Consensus 272 ~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~ 351 (478)
T cd07085 272 GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK 351 (478)
T ss_pred hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
++|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|
T Consensus 352 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v 431 (478)
T cd07085 352 VPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMV 431 (478)
T ss_pred CCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCC-CCCCCccCCCCCCCCC--cchHHHHHhhhhccEEEEe
Q 013526 392 WINCYFAF-DSDCPYGGYKMSGFGR--DCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 392 ~vN~~~~~-~~~~p~GG~~~SG~g~--~~g~~~l~~~t~~k~v~~~ 434 (441)
+||++... .+.+||||+|.||+|+ ++|.+++++||+.|+|+++
T Consensus 432 ~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 432 GINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred EEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 99997553 4678999999999994 7899999999999999865
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-87 Score=683.67 Aligned_cols=426 Identities=37% Similarity=0.627 Sum_probs=396.4
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.+++++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~ 95 (456)
T cd07145 17 SLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEE 95 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35666666665 3567899999999999999999999999999999999999975 56999999999999987
Q ss_pred hhhhcCceecccc-----ccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMSR-----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
.+.+.+...+... +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 175 (456)
T cd07145 96 AKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEE 175 (456)
T ss_pred HHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 7665554433221 33456789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+++++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+
T Consensus 176 ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i 254 (456)
T cd07145 176 AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGSDPMIVLKDADLERAVSIA 254 (456)
T ss_pred cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCCCeeEECCCCCHHHHHHHH
Confidence 999999999999977788899999999999999999999999999988 7899999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++|
T Consensus 255 ~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~g 334 (456)
T cd07145 255 VRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYG 334 (456)
T ss_pred HHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
|... .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|+
T Consensus 335 g~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~ 412 (456)
T cd07145 335 GKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGG 412 (456)
T ss_pred CCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 9764 38999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 391 IWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 391 v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|+||+.... .+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 413 v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 413 VVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred EEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 999987654 3679999999999999999999999999998853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-87 Score=683.78 Aligned_cols=428 Identities=30% Similarity=0.474 Sum_probs=392.3
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 30 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 108 (474)
T cd07130 30 QATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEG-LGEVQEMIDICDFAVGL 108 (474)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHh
Confidence 34566666665 4567899999999999999999999999999999999999974 57999999999999887
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHH----HHH
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~----l~~ 150 (441)
.+.+.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.++ +.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~ 188 (474)
T cd07130 109 SRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEK 188 (474)
T ss_pred HHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHh
Confidence 665554433321 344567889999999999999999999999999999999999999999999999887766 579
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++++++++ .+.+..|+.||++|.|.||||+++++.|.+.++ .+.+|+++|+|||||+||++|+|++.|++.+
T Consensus 189 aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i 266 (474)
T cd07130 189 NGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA-ARFGRSLLELGGNNAIIVMEDADLDLAVRAV 266 (474)
T ss_pred cCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH-hcCCCEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 99999999999984 457899999999999999999999999999887 7889999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++|
T Consensus 267 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 346 (474)
T cd07130 267 LFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFG 346 (474)
T ss_pred HHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh--ccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS--IRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~--l~~ 388 (441)
|......|+|++|||+.++++ |+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++++++++ +++
T Consensus 347 g~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~ 425 (474)
T cd07130 347 GKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDC 425 (474)
T ss_pred CCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcce
Confidence 986544689999999988766 99999999999999999999999999999999999999999999999999987 899
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 426 g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 426 GIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred EEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 9999998665 4578999999999999999999999999999988764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-87 Score=685.13 Aligned_cols=428 Identities=42% Similarity=0.675 Sum_probs=395.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.++++++.
T Consensus 34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 113 (479)
T cd07116 34 RSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGC 113 (479)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 356677777663 668899999999999999999999999999999999999975556999999999999988
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
..+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~ 192 (479)
T cd07116 114 IRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPP 192 (479)
T ss_pred HHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCc
Confidence 7765554433333445678999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCC------CCHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD------VDVNTAADM 229 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~d------ad~~~aa~~ 229 (441)
|++|++++.+.+.+..|+.||++|.|.||||+++|+.|.+.++ ..++|+++|+|||||+||++| +|++.|++.
T Consensus 193 gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~ 271 (479)
T cd07116 193 GVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS-ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEG 271 (479)
T ss_pred CcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHH
Confidence 9999999877778999999999999999999999999999988 788999999999999999987 799999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
++++ ++|+||.|+++++||||+++|++|+++|+++++++++|+|.++++.+||++++.+++++++++++++++|+++++
T Consensus 272 i~~~-~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 350 (479)
T cd07116 272 FVMF-ALNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLT 350 (479)
T ss_pred HHHH-HhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 9986 469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh
Q 013526 310 GGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385 (441)
Q Consensus 310 gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~ 385 (441)
||.... ..|+|+.|||+.+++ +|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++++
T Consensus 351 gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~ 429 (479)
T cd07116 351 GGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRG 429 (479)
T ss_pred CCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHh
Confidence 997642 368999999998874 999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 386 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 386 l~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|++++++
T Consensus 430 l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 479 (479)
T cd07116 430 IQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVSY 479 (479)
T ss_pred cCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 99999999998777788999999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-87 Score=689.79 Aligned_cols=430 Identities=36% Similarity=0.586 Sum_probs=400.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 65 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~i~~~~~~~~~ 143 (512)
T cd07124 65 KATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEA-DADVAEAIDFLEYYARE 143 (512)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35666677666 3567899999999999999999999999999999999999975 56999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~ 223 (512)
T cd07124 144 MLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPP 223 (512)
T ss_pred HHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCC
Confidence 87775554443445677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc-----CCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~-----~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
|++|++++++.+.+..|+.||++|.|.||||+.+++.|.+.++.. +++|+++|+||+||+||++|||++.|++.+
T Consensus 224 gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i 303 (512)
T cd07124 224 GVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGI 303 (512)
T ss_pred CceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHH
Confidence 999999997777889999999999999999999999999998732 689999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++++. |+++++|
T Consensus 304 ~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~g 382 (512)
T cd07124 304 VRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLG 382 (512)
T ss_pred HHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred CCcCCC--CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 311 GKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 311 g~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
|..... .|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++
T Consensus 383 G~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 462 (512)
T cd07124 383 GEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEV 462 (512)
T ss_pred CccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 986542 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||+.... .+.+||||+|+||+| +++|.+++++||+.|++++++
T Consensus 463 G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 463 GNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred ceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEeC
Confidence 99999987653 367999999999999 788999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-87 Score=682.16 Aligned_cols=426 Identities=46% Similarity=0.773 Sum_probs=398.2
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.
T Consensus 16 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~ 94 (454)
T cd07118 16 GTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA-RGEIEGAADLWRYAAS 94 (454)
T ss_pred CCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 45566665553 566899999999999999999999999999999999999974 6799999999999988
Q ss_pred hhhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~ 174 (454)
T cd07118 95 LARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174 (454)
T ss_pred HHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCC
Confidence 776665543332 2334567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++++.+.+..|+.|+++|.|.||||+++|+.|.+.++ .+++++++|+||+||+||++|||++.|++.|+++
T Consensus 175 P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~ 253 (454)
T cd07118 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADADLDAAADAVVFG 253 (454)
T ss_pred CccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHH
Confidence 999999999876678899999999999999999999999999988 7889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||..
T Consensus 254 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 333 (454)
T cd07118 254 VYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGER 333 (454)
T ss_pred HHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 314 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 314 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.. ..|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+
T Consensus 334 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~ 413 (454)
T cd07118 334 LASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW 413 (454)
T ss_pred CCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEE
Confidence 54 36899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+.....+.+||||.|.||+|+++|++++++||+.|+++
T Consensus 414 iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 414 VNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred ECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9998887788999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-87 Score=684.09 Aligned_cols=428 Identities=31% Similarity=0.513 Sum_probs=397.6
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...
T Consensus 32 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~ 110 (478)
T cd07086 32 ASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEG-LGEVQEMIDICDYAVGLS 110 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4555666655 3667899999999999999999999999999999999999974 469999999999999888
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---- 151 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a---- 151 (441)
+.+.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~ 190 (478)
T cd07086 111 RMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKN 190 (478)
T ss_pred HHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhcc
Confidence 77665443322 2445678999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|+++++++++. .+..|..||++|.|.||||+.+++.|.+.++ .+.+++++|+||+||+||++|||++.|++.|+
T Consensus 191 glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~ 268 (478)
T cd07086 191 GLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVL 268 (478)
T ss_pred CCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHH
Confidence 999999999998654 8889999999999999999999999999988 78899999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|+|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||
T Consensus 269 ~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg 348 (478)
T cd07086 269 FAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGG 348 (478)
T ss_pred HHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCC--CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh--cc
Q 013526 312 KPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS--IR 387 (441)
Q Consensus 312 ~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~--l~ 387 (441)
..... .|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++ ++
T Consensus 349 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~ 428 (478)
T cd07086 349 KRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSD 428 (478)
T ss_pred CcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCccc
Confidence 76543 589999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ceEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 388 AGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 388 ~g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+|+||+... ..+.+||||.|.||+|+++|.+++++||+.|+|++++
T Consensus 429 ~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 429 CGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 477 (478)
T ss_pred ceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEeC
Confidence 99999999866 3468999999999999999999999999999998764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-87 Score=683.08 Aligned_cols=425 Identities=45% Similarity=0.766 Sum_probs=397.0
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~ 110 (467)
T TIGR01804 31 EATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGL 110 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 35666776666 3557899999999999999999999999999999999999976467999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+.......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~ 190 (467)
T TIGR01804 111 ADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPD 190 (467)
T ss_pred HHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCc
Confidence 87765554333222456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++.+.++.|+.|+.+|.|.||||+++|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 191 gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~ 269 (467)
T TIGR01804 191 GVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA-DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNF 269 (467)
T ss_pred CcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 9999999876788999999999999999999999999999987 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+++||.|+++++||||+++|++|+++|++.++++++|+|.++++++||++++.+.+++++++++++.+|+++++||....
T Consensus 270 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~ 349 (467)
T TIGR01804 270 FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPE 349 (467)
T ss_pred HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.++++++++++++|+|
T Consensus 350 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v 429 (467)
T TIGR01804 350 REGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTV 429 (467)
T ss_pred cccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 2589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhcc
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k 429 (441)
+||++....+.+||||+|+||+|+++|.+++++||+.|
T Consensus 430 ~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 430 WINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred EECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99998877778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=684.12 Aligned_cols=429 Identities=42% Similarity=0.724 Sum_probs=400.3
Q ss_pred CCCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus 53 ~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a 132 (494)
T PRK09847 53 RGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYA 132 (494)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 346677776663 6668999999999999999999999999999999999998765569999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.+++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++|+
T Consensus 133 ~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGl 212 (494)
T PRK09847 133 EAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGL 212 (494)
T ss_pred HHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCc
Confidence 98877766544433344567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC-CHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALL 232 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da-d~~~aa~~i~~ 232 (441)
|+|++|++++.+.+.+..|+.|+++|.|.||||+.+++.|.+.++...++|+++|+||+||+||.+|+ |++.|++.+++
T Consensus 213 P~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~ 292 (494)
T PRK09847 213 PDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAA 292 (494)
T ss_pred CcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHH
Confidence 99999999997778889999999999999999999999999987744789999999999999999997 99999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++.+||++++.+++++++++++++++| ++++||.
T Consensus 293 ~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~ 371 (494)
T PRK09847 293 GIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGR 371 (494)
T ss_pred HHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999987
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .+.|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+
T Consensus 372 ~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~ 450 (494)
T PRK09847 372 NAG-LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF 450 (494)
T ss_pred cCC-CCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence 643 5789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
||+.....+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 451 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 451 VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred ECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 999877777899999999999999999999999999999765
|
|
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=679.51 Aligned_cols=426 Identities=45% Similarity=0.726 Sum_probs=397.5
Q ss_pred CCCHHHHHHHHH--------hc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT--------VH-GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.++++++++ |. .++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++
T Consensus 15 ~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~ 93 (454)
T cd07109 15 RGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQA-RADVEAAARYFEYYGG 93 (454)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 356667766663 33 6899999999999999999999999999999999999974 5699999999999998
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+|
T Consensus 94 ~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP 173 (454)
T cd07109 94 AADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLP 173 (454)
T ss_pred HHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcC
Confidence 88776665444334567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|+|++.|++.|++++
T Consensus 174 ~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~ 252 (454)
T cd07109 174 AGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAI 252 (454)
T ss_pred ccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999999877778899999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+++||.|+++++||||++++++|+++|+++++++++|+|.+ .+++||++++.+++++.+++++++++|+++++||...
T Consensus 253 ~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~ 331 (454)
T cd07109 253 IQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIA 331 (454)
T ss_pred HhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcC
Confidence 999999999999999999999999999999999999999986 6899999999999999999999999999999998754
Q ss_pred C---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 315 G---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 315 ~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
. +.|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|.|
T Consensus 332 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v 411 (454)
T cd07109 332 EGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQV 411 (454)
T ss_pred cccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeE
Confidence 3 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcC-CCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYF-AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~-~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||++. ...+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 412 ~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 412 FVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred EECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 999987 45568899999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=677.59 Aligned_cols=423 Identities=36% Similarity=0.582 Sum_probs=394.7
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+ ...|+..+++.+++++..
T Consensus 9 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~i~~l~~~~~~ 87 (443)
T cd07152 9 VADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPK-AGFEVGAAIGELHEAAGL 87 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHh
Confidence 45666777666 456789999999999999999999999999999999999986 456999999999999987
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~aglP 154 (441)
..+..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ ..+.+++.++|+|
T Consensus 88 ~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P 167 (443)
T cd07152 88 PTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLP 167 (443)
T ss_pred HHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcC
Confidence 765544444433456678899999999999999999999999999999999999999999999996 7899999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++
T Consensus 168 ~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~ 245 (443)
T cd07152 168 AGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLDLAASNGAWGA 245 (443)
T ss_pred cCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 999999998 5678899999999999999999999999999887 78899999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|+++++||..
T Consensus 246 ~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~- 324 (443)
T cd07152 246 FLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY- 324 (443)
T ss_pred HhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
.|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 325 --~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 402 (443)
T cd07152 325 --DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN 402 (443)
T ss_pred --CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEEC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhccEEE
Q 013526 395 CYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 395 ~~~~~~-~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~ 432 (441)
++.... +.+||||+|.||+| +++|++++++||+.|+++
T Consensus 403 ~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 403 DQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred CCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 987754 67999999999999 788999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-87 Score=681.32 Aligned_cols=428 Identities=49% Similarity=0.823 Sum_probs=399.2
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.
T Consensus 21 ~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~ 100 (462)
T cd07112 21 CDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAE 100 (462)
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666663 55679999999999999999999999999999999999997655699999999999999
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..+...+...+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++|+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP 180 (462)
T cd07112 101 AIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180 (462)
T ss_pred HHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCC
Confidence 88776554333323445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC-CHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLG 233 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da-d~~~aa~~i~~~ 233 (441)
+|+++++++++.+.+..|+.|+++|.|.||||+++++.|.+.++...++|+++|+||+||+||++|+ |++.|++.++++
T Consensus 181 ~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~ 260 (462)
T cd07112 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAG 260 (462)
T ss_pred CCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHH
Confidence 9999999997777899999999999999999999999999988744789999999999999999999 999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||..
T Consensus 261 ~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~ 340 (462)
T cd07112 261 IFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKR 340 (462)
T ss_pred HHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 314 IG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 314 ~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. ..|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|+|
T Consensus 341 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v 420 (462)
T cd07112 341 VLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTV 420 (462)
T ss_pred CCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceE
Confidence 42 2588999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||+++...+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 421 ~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 421 WVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred EECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 99998877788999999999999999999999999999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=677.48 Aligned_cols=422 Identities=41% Similarity=0.683 Sum_probs=393.7
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++..
T Consensus 16 ~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~ 94 (446)
T cd07106 16 ASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLD 94 (446)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHhhh
Confidence 4556666655 4667899999999999999999999999999999999999874 569999999999988765
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
. .+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|
T Consensus 95 ~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g 171 (446)
T cd07106 95 L--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPG 171 (446)
T ss_pred h--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcC
Confidence 2 222222223556789999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+++++++ +.+.+..|+.|+++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|+
T Consensus 172 ~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~ 249 (446)
T cd07106 172 VLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFI 249 (446)
T ss_pred eEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHH
Confidence 9999998 4568899999999999999999999999999987 7899999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 316 (441)
|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.++++++++++++..+|+++++||.....
T Consensus 250 ~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~ 329 (446)
T cd07106 250 NSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDG 329 (446)
T ss_pred hcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCc
Q 013526 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~ 396 (441)
.|+|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||++
T Consensus 330 ~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~ 409 (446)
T cd07106 330 PGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTH 409 (446)
T ss_pred CCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 397 FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 397 ~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
....+.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 410 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 410 GALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 888889999999999999999999999999999875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=686.15 Aligned_cols=430 Identities=31% Similarity=0.526 Sum_probs=398.0
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.+++++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~ 143 (511)
T TIGR01237 65 KASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPE-ADAEVAEAIDFCEYYARE 143 (511)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 35667776666 356789999999999999999999999999999999999997 456999999999999988
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++...+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP 223 (511)
T TIGR01237 144 MERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLP 223 (511)
T ss_pred HHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCC
Confidence 87765533222 24556788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
+|+||++++.+.+.+..|+.||+++.|.||||+.+++.|.+.++. ++++|+++|+||+||+||++|||++.|++.
T Consensus 224 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~ 303 (511)
T TIGR01237 224 PGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAG 303 (511)
T ss_pred CCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHH
Confidence 999999999777789999999999999999999999999998763 378999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++| ++++
T Consensus 304 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~ 382 (511)
T TIGR01237 304 AVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAI 382 (511)
T ss_pred HHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 8899
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||....+.|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|
T Consensus 383 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G 462 (511)
T TIGR01237 383 GGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVG 462 (511)
T ss_pred CCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcc
Confidence 98765446899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~~--~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||+.... .+.+||||+|.||+|. .+|.+++++||+.|+++.++
T Consensus 463 ~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 463 NLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTENI 511 (511)
T ss_pred eEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEeC
Confidence 9999998653 3568999999999995 78999999999999998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-86 Score=679.60 Aligned_cols=425 Identities=31% Similarity=0.541 Sum_probs=394.2
Q ss_pred CCCHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhh
Q 013526 4 LPSRQHVRRLITVH-----GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 78 (441)
Q Consensus 4 ~~~~~~~~~a~~~~-----~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~ 78 (441)
.++.+++++|++.+ .++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..+.+
T Consensus 35 ~~~~~~v~~av~~A~~a~~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~~~~ 113 (472)
T TIGR03250 35 KASVDDVRRAFAIAAAYRPTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKD-SLYEVGRVADVLTFAAAEALR 113 (472)
T ss_pred CCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888654 578999999999999999999999999999999999997 456999999999999988766
Q ss_pred hcCceecc-----ccccccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 79 IHGEVLKM-----SRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 79 ~~~~~~~~-----~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
..+...+. ..+...+..++|+ |||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aG 193 (472)
T TIGR03250 114 DDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAG 193 (472)
T ss_pred hcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcC
Confidence 55443221 1234567889998 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++.+.+.+..|+.||+++.|.||||+.+++.+.+.++ .+|+++|+|||||+||++|||++.|++.+++
T Consensus 194 lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~ 270 (472)
T TIGR03250 194 LPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVK 270 (472)
T ss_pred CCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHH
Confidence 9999999999877778899999999999999999999999998764 5899999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||.
T Consensus 271 ~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~ 350 (472)
T TIGR03250 271 GSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV 350 (472)
T ss_pred HHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
. .|+|++|||+.+++++|+++++|+||||++|++|+|.+||++++|+++|||++||||+|.+++.++++++++|+|+
T Consensus 351 ~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~ 427 (472)
T TIGR03250 351 R---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVN 427 (472)
T ss_pred c---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEE
Confidence 5 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~~~-~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||+..... +.+||||+|+||+| ..+|.+++++||+.|++++++
T Consensus 428 iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 428 VWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred EcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence 99876543 56899999999999 567799999999999998763
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-86 Score=677.68 Aligned_cols=424 Identities=31% Similarity=0.495 Sum_probs=391.9
Q ss_pred CCCHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLITV---------HGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~~---------~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|++. +.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.
T Consensus 17 ~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~ 95 (455)
T cd07148 17 TVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA-KVEVTRAIDGVELAAD 95 (455)
T ss_pred CCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 3456666666633 35789999999999999999999999999999999999974 5699999999999998
Q ss_pred hhhhhcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 75 ~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
.+.+..+...+.. .+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~ 175 (455)
T cd07148 96 ELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH 175 (455)
T ss_pred HHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHH
Confidence 8877655433221 23456789999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++++++++ .+.++.|+.||++|.|.||||+++|+.|.+.++ . .+|+++|+|||||+||++|+|++.|++.
T Consensus 176 ~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa-~-~~~~~lElGG~~p~iV~~dADl~~aa~~ 252 (455)
T cd07148 176 EAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLA-P-GTRCALEHGGAAPVIVDRSADLDAMIPP 252 (455)
T ss_pred HcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh-c-CCcEEEecCCCCceEECCCCCHHHHHHH
Confidence 999999999999984 467899999999999999999999999999876 4 5899999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
|++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++
T Consensus 253 i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~ 332 (455)
T cd07148 253 LVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLC 332 (455)
T ss_pred HHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||... .++|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 333 gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g 410 (455)
T cd07148 333 GGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDAT 410 (455)
T ss_pred CCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcC
Confidence 99764 4789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 390 IIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 390 ~v~vN~~~~~~-~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
.|+||++.... +.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 411 ~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 411 AVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred eEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 99999986533 568999999999999999999999999998853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=684.20 Aligned_cols=430 Identities=27% Similarity=0.426 Sum_probs=393.4
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEE-HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~-~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|++ ++++|++++++|+|||+.++...|+..+++.+++++.
T Consensus 65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~ 144 (522)
T cd07123 65 YADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVK 144 (522)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 35566776665 45678999999999999999996 8999999999999999997544588899999999998
Q ss_pred hhhhhcCceecc-ccccccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 75 AADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
++.+..+...+. ..+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++..|.+++.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aG 223 (522)
T cd07123 145 YAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAG 223 (522)
T ss_pred HHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcC
Confidence 877665433221 2355678999998 999999999999999999999999 6999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCC------ceeeecCCCCceeecCCCCHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTA 226 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iV~~dad~~~a 226 (441)
+|+|+||++++.+.+.+..|+.||+++.|.||||+++|+.|.+.++ .+.+ ++++|+|||||+||++|||++.|
T Consensus 224 lP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~A 302 (522)
T cd07123 224 LPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSL 302 (522)
T ss_pred cCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHH
Confidence 9999999999977778999999999999999999999999999988 6665 89999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc-CC
Q 013526 227 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GA 305 (441)
Q Consensus 227 a~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga 305 (441)
++.+++++|.|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++ |+
T Consensus 303 a~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga 382 (522)
T cd07123 303 VTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEA 382 (522)
T ss_pred HHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred eEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCC-CCcEEEEecCCHHHHHHH
Q 013526 306 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTR-YGLAAGIMTKDLNVANTV 382 (441)
Q Consensus 306 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~~v~s~d~~~~~~~ 382 (441)
++++||....+.|+|++|||+.+++++|+++++|+||||++|++|+| ++|||+++|+++ |||++||||+|.+.+.++
T Consensus 383 ~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~ 462 (522)
T cd07123 383 EIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREA 462 (522)
T ss_pred EEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHH
Confidence 99999976544689999999999999999999999999999999995 799999999984 999999999999999999
Q ss_pred HHhc--cceEEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 383 SRSI--RAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 383 ~~~l--~~g~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
++++ ++|.|+||+.... .+.+||||+|.||+| +++|.+++++||+.|+++++.
T Consensus 463 ~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~~ 520 (522)
T cd07123 463 TDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKETF 520 (522)
T ss_pred HHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEec
Confidence 9997 5999999997653 357899999999996 999999999999999987754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-86 Score=680.18 Aligned_cols=426 Identities=41% Similarity=0.656 Sum_probs=398.8
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++.++
T Consensus 32 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~~~~a 110 (468)
T cd07088 32 ATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWA 110 (468)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence 45566666664 55789999999999999999999999999999999999997 4679999999999999888
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~ 190 (468)
T cd07088 111 RRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPA 190 (468)
T ss_pred HHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCc
Confidence 76655444332 35567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++.+.+..|+.|+++|.|.||||+.++++|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 191 gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~ 269 (468)
T cd07088 191 GVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRI 269 (468)
T ss_pred cceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHh
Confidence 9999999976678899999999999999999999999999987 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+|+||.|+++++||||++++++|+++|+++++++++|+|.++++.+||++++.+++++++++++++.+|+++++||....
T Consensus 270 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~ 349 (468)
T cd07088 270 INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPE 349 (468)
T ss_pred cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred -CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 316 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 316 -~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
+.|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 350 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 429 (468)
T cd07088 350 GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYIN 429 (468)
T ss_pred CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
++.......||||.|+||+|+++|++++++||+.|+++
T Consensus 430 ~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 430 RENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 98876666799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=677.40 Aligned_cols=423 Identities=39% Similarity=0.631 Sum_probs=397.6
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|+++++.|+|||..+ +..|+..+++.+++++.+.
T Consensus 18 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~~~~~ 96 (451)
T cd07150 18 GSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGK-AWFETTFTPELLRAAAGEC 96 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4566666666 355789999999999999999999999999999999999996 4569999999999999888
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~ 176 (451)
T cd07150 97 RRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPK 176 (451)
T ss_pred HHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCc
Confidence 77655544433 45667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++.+.+..|+.|+++|.|.||||+.+++.|.+.++ ...+|+++|+|||||+||++|+|++.|++.+++++|
T Consensus 177 g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~ 255 (451)
T cd07150 177 GVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAF 255 (451)
T ss_pred CcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHH
Confidence 9999999877778999999999999999999999999999988 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 256 ~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-- 333 (451)
T cd07150 256 MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY-- 333 (451)
T ss_pred hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
+|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus 334 -~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~ 412 (451)
T cd07150 334 -DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHIND 412 (451)
T ss_pred -CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 396 YFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 396 ~~~~~-~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+.... +.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 413 ~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 413 PTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred CCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 87744 67999999999999999999999999999875
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-86 Score=679.46 Aligned_cols=429 Identities=41% Similarity=0.659 Sum_probs=398.8
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.++..+|.++|+++++.|.+++++|++++++|+|||..++ ..|+..+++.+++++...
T Consensus 34 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ev~~~i~~~~~~~~~~ 112 (478)
T cd07131 34 STASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEG 112 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666655 4567899999999999999999999999999999999999975 469999999999998887
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+...+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~ 192 (478)
T cd07131 113 RRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPP 192 (478)
T ss_pred HHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCC
Confidence 76655433321 23456899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+|+++++++.+.+..|+.||++|.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 193 gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~ 271 (478)
T cd07131 193 GVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA-RPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAF 271 (478)
T ss_pred CcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH
Confidence 9999999977678999999999999999999999999999987 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++|+.+|+++++||....
T Consensus 272 ~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 351 (478)
T cd07131 272 GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLT 351 (478)
T ss_pred hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
..|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|++++||+++|||+|.++++++++++++|+|
T Consensus 352 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v 431 (478)
T cd07131 352 GGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGIT 431 (478)
T ss_pred cccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEE
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 392 WINCYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 392 ~vN~~~~~-~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+||+.... .+.+||||+|+||+| +++|.+++++||+.|+|++++
T Consensus 432 ~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 432 YVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred EECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEeC
Confidence 99998764 578999999999999 788999999999999998764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=675.64 Aligned_cols=426 Identities=36% Similarity=0.583 Sum_probs=393.0
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 14 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 92 (454)
T cd07101 14 QSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FEEVLDVAIVARYYARR 92 (454)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHH
Confidence 35666666665 4668899999999999999999999999999999999999974 67999999999999988
Q ss_pred hhhhcCce-ecc--ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 76 ADKIHGEV-LKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+.+..... .+. +.....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~ag 172 (454)
T cd07101 93 AERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAG 172 (454)
T ss_pred HHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcC
Confidence 76654322 111 113456889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++++.+.+..|+.| ++.|.||||+++|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++
T Consensus 173 lP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~ 249 (454)
T cd07101 173 LPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVR 249 (454)
T ss_pred cCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceEEECCCCCHHHHHHHHHH
Confidence 99999999999777888999987 578999999999999999988 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.
T Consensus 250 ~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~ 329 (454)
T cd07101 250 ACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329 (454)
T ss_pred HHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCC-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 313 PIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 313 ~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
... ..|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|++++||++||||+|.++++++++++++|.|
T Consensus 330 ~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v 409 (454)
T cd07101 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTV 409 (454)
T ss_pred CCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceE
Confidence 533 3579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 392 WINCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 392 ~vN~~~~---~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 410 ~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 410 NVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred EECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 9999755 34678999999999999999999999999998863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-86 Score=682.32 Aligned_cols=431 Identities=26% Similarity=0.408 Sum_probs=394.3
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|+ +++++|++++++|+|||+.++...++..+++.+++++.
T Consensus 65 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~ 144 (533)
T TIGR01236 65 NATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVK 144 (533)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHH
Confidence 35566777666 4557899999999999999999 59999999999999999997533349999999999998
Q ss_pred hhhhhcCcee-ccccccccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 75 AADKIHGEVL-KMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+++++.+... ....+..++..++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++..|.+++.++|
T Consensus 145 ~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aG 223 (533)
T TIGR01236 145 YARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAG 223 (533)
T ss_pred HHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcC
Confidence 8876654432 122355678899999 999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCC------ceeeecCCCCceeecCCCCHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTA 226 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iV~~dad~~~a 226 (441)
+|+|+||++++.+.+.++.|+.||+++.|.||||+++|+.|.+.++ .+.+ ++++|+|||||+||++|||++.|
T Consensus 224 lP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~A 302 (533)
T TIGR01236 224 LPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHA 302 (533)
T ss_pred CCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHH
Confidence 9999999999977788999999999999999999999999999988 6665 49999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcC--
Q 013526 227 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-- 304 (441)
Q Consensus 227 a~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-- 304 (441)
++.+++++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++.+++++++++|
T Consensus 303 a~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 382 (533)
T TIGR01236 303 VTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAE 382 (533)
T ss_pred HHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHH
Q 013526 305 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANT 381 (441)
Q Consensus 305 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~ 381 (441)
+++++||......|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||+++|||+|.+.+.+
T Consensus 383 a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~ 462 (533)
T TIGR01236 383 LTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILE 462 (533)
T ss_pred eEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHH
Confidence 799999976544689999999999999999999999999999999999 59999999 789999999999999999999
Q ss_pred HHHhcc--ceEEEEcCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC
Q 013526 382 VSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 382 ~~~~l~--~g~v~vN~~~~--~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
++++++ +|.|+||+... ..+.+||||+|.||+| +++|.+++++|++.|+++....
T Consensus 463 ~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~~ 522 (533)
T TIGR01236 463 ADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETFV 522 (533)
T ss_pred HHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEcc
Confidence 999977 99999998765 3367899999999998 8999999999999999988763
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-86 Score=677.16 Aligned_cols=432 Identities=29% Similarity=0.408 Sum_probs=393.0
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++++ .|+.++..+|.++|+++++.|++++++|+++++.|+|||..++ ..|+..+++.+++++...
T Consensus 34 a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~ 112 (487)
T PRK09457 34 ATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEA-ATEVTAMINKIAISIQAY 112 (487)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666655 4567899999999999999999999999999999999999975 569999999999888776
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
....+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~g 192 (487)
T PRK09457 113 HERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAG 192 (487)
T ss_pred HHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcC
Confidence 55544433222345568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+++++++ +.+.+..|+.||++|.|.||||+.+|+.|.+.++....+++++|+|||||+||++|||++.|++.+++++|.
T Consensus 193 vv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~ 271 (487)
T PRK09457 193 VLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFI 271 (487)
T ss_pred eEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhh
Confidence 9999998 667899999999999999999999999999987644567899999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccH-HHHHHHHHHHHhccccCCCC-CCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 237 NKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~-~~f~~~L~~~~~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+||.|+++++||||+++| ++|+++|+++++++++|+|. ++.+++||+++..+++++.+++++++++|+++++||...
T Consensus 272 ~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 351 (487)
T PRK09457 272 SAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQL 351 (487)
T ss_pred ccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc
Confidence 9999999999999999998 99999999999999999996 788999999999999999999999999999999988654
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
+++|+|++|||+ +++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||
T Consensus 352 ~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN 430 (487)
T PRK09457 352 QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWN 430 (487)
T ss_pred CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEE
Confidence 446899999999 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCCC
Q 013526 395 CYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 440 (441)
Q Consensus 395 ~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~~ 440 (441)
+... ..+.+||||+|.||+|+++|..+ .+||+.|++++++...+|
T Consensus 431 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~~~~ 476 (487)
T PRK09457 431 KPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDSLTL 476 (487)
T ss_pred CCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEecccccC
Confidence 8765 34679999999999999999544 559999999988654444
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-86 Score=678.38 Aligned_cols=425 Identities=39% Similarity=0.671 Sum_probs=395.4
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus 33 ~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~ 112 (471)
T cd07139 33 ATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAA 112 (471)
T ss_pred CCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666652 66789999999999999999999999999999999999976666699999999999998
Q ss_pred hhhhhcCc-eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
..++..+. ..+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~agl 192 (471)
T cd07139 113 LARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGL 192 (471)
T ss_pred HHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCC
Confidence 87665432 22222345568899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++ +.+.+..|+.|++++.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.|+++
T Consensus 193 P~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~-~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~ 270 (471)
T cd07139 193 PPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPA 270 (471)
T ss_pred CCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHH
Confidence 9999999998 5678899999999999999999999999999887 7889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||..
T Consensus 271 ~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 350 (471)
T cd07139 271 SLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGR 350 (471)
T ss_pred HHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 314 IG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 314 ~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. ..|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.+.++++++++|.|
T Consensus 351 ~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v 430 (471)
T cd07139 351 PAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTV 430 (471)
T ss_pred CCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceE
Confidence 43 3589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||++. ..+.+||||.|.||+|+++|.+++++||+.|+++
T Consensus 431 ~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 431 GVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred EECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 999976 5678999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=673.41 Aligned_cols=425 Identities=33% Similarity=0.514 Sum_probs=396.7
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+
T Consensus 15 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~~~~~~~~~ 93 (452)
T cd07102 15 ASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEIRGMLERARYMISIA 93 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666655 4567899999999999999999999999999999999999974 679999999999998887
Q ss_pred hhhcCc-eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++..+. ..+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|.+++.++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~ 173 (452)
T cd07102 94 EEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPE 173 (452)
T ss_pred HHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCc
Confidence 765443 2233345567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++ +.+..|+.||.+|.|.||||+++++.|.+.++ ...+|+.+|+|||||+||++|||++.|++.+++++|
T Consensus 174 g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~ 251 (452)
T cd07102 174 GVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAF 251 (452)
T ss_pred CcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence 9999999966 78899999999999999999999999999887 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC-
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI- 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~- 314 (441)
+++||.|++++++|||++++++|+++|++.++++++|+|.++++++||++++.+++++++++++++.+|+++++||...
T Consensus 252 ~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~ 331 (452)
T cd07102 252 FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFP 331 (452)
T ss_pred HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999753
Q ss_pred --CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 315 --GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 315 --~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
...|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 332 ~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~ 411 (452)
T cd07102 332 EDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVF 411 (452)
T ss_pred CCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEE
Confidence 236899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||++....+..||||+|+||+|+++|.+++++||+.|+++
T Consensus 412 iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 412 MNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred ECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 9998777778999999999999999999999999999875
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-85 Score=673.72 Aligned_cols=422 Identities=36% Similarity=0.602 Sum_probs=394.3
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 17 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~ 95 (453)
T cd07094 17 ADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDA-RVEVDRAIDTLRLAAEE 95 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 34566666665 4668899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+.+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ 175 (453)
T cd07094 96 AERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVE 175 (453)
T ss_pred HHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH
Confidence 877655443332 244567889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+++++++++.+.++.|+.||++|.|.||||+++++.|.+.+ ..+|+++|+|||||+||++|+|++.|++.+
T Consensus 176 ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i 252 (453)
T cd07094 176 AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEAL 252 (453)
T ss_pred cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 99999999999997777899999999999999999999999999975 578999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|+++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++|
T Consensus 253 ~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 332 (453)
T cd07094 253 AKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCG 332 (453)
T ss_pred HHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
|.. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+
T Consensus 333 g~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~ 409 (453)
T cd07094 333 GER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGG 409 (453)
T ss_pred ccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCe
Confidence 864 58899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 391 IWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 391 v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
|+||++... .+.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 410 v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 410 VMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred EEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999998664 578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-86 Score=675.47 Aligned_cols=426 Identities=46% Similarity=0.783 Sum_probs=398.0
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|.+++++|++++++|+|||..+ ...|+..+++.+++++.
T Consensus 16 ~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~~~~~a~ 94 (457)
T cd07114 16 ASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRE-TRAQVRYLAEWYRYYAG 94 (457)
T ss_pred CCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHH
Confidence 45556655552 56689999999999999999999999999999999999997 46699999999999988
Q ss_pred hhhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
..++..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~agl 174 (457)
T cd07114 95 LADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGF 174 (457)
T ss_pred HHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCc
Confidence 7766655433332 345678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+|+++++++.+.+..|+.|++++.|.||||+.+++.+.+.++ .+++|+++|+||+||+||++|||++.|++.|+++
T Consensus 175 P~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~ 253 (457)
T cd07114 175 PPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAG 253 (457)
T ss_pred CCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHH
Confidence 999999999977678899999999999999999999999999987 7889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+++||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..
T Consensus 254 ~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~ 333 (457)
T cd07114 254 IFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGER 333 (457)
T ss_pred HHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 314 IG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 314 ~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
.. ..|+|++|||+.++++++.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 334 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g 413 (457)
T cd07114 334 PSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAG 413 (457)
T ss_pred cccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcc
Confidence 43 35899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+|+||+.....+.+||||.|.||+|+++|.+++++||+.|+++
T Consensus 414 ~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 414 TVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred eEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999998877788999999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=675.17 Aligned_cols=423 Identities=41% Similarity=0.671 Sum_probs=394.2
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 32 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~ 111 (466)
T cd07138 32 LGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADA 111 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667777766 3557899999999999999999999999999999999999876556999999999999887
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+...+... ....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++|+|+
T Consensus 112 ~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~ 187 (466)
T cd07138 112 LKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPA 187 (466)
T ss_pred hhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCC
Confidence 766543221 2345678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++.+.+..|+.||+++.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 188 g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~ 266 (466)
T cd07138 188 GVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA-DTVKRVALELGGKSANIILDDADLEKAVPRGVAACF 266 (466)
T ss_pred CcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 9999999877778999999999999999999999999999987 778999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+++||.|+++++||||++++++|+++|+++++++++|+|+++++++||++++.+++++++++++++++|+++++||....
T Consensus 267 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~ 346 (466)
T cd07138 267 ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRP 346 (466)
T ss_pred hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997432
Q ss_pred ---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 316 ---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+
T Consensus 347 ~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~ 426 (466)
T cd07138 347 EGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVH 426 (466)
T ss_pred CcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+.. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 427 iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 427 INGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred ECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99864 5678999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-85 Score=671.88 Aligned_cols=425 Identities=40% Similarity=0.666 Sum_probs=396.0
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++++ .|+.++.++|.++|+++++.|.+++++|++++++|+|||..+....|+..+++.+++++...
T Consensus 16 ~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~ 95 (450)
T cd07092 16 ASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAA 95 (450)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666655 45678999999999999999999999999999999999998655679999999999999877
Q ss_pred hhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+...+...+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..|.+++.+ |+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~ 174 (450)
T cd07092 96 RTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPP 174 (450)
T ss_pred HHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCc
Confidence 6654432211 1234567899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++.+.++.|+.|++++.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.|++++|
T Consensus 175 g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~ 253 (450)
T cd07092 175 GVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGY 253 (450)
T ss_pred ccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 9999999877668899999999999999999999999999987 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.++++++++++++. +|+++++||....
T Consensus 254 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~ 332 (450)
T cd07092 254 YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAE 332 (450)
T ss_pred hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 9999999998655
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|++++||++||||+|.+.++++++++++|.|+||+
T Consensus 333 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~ 412 (450)
T cd07092 333 GPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNT 412 (450)
T ss_pred CCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
.....+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 413 ~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 413 HIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 8887888999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-86 Score=682.38 Aligned_cols=425 Identities=45% Similarity=0.746 Sum_probs=397.6
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++++
T Consensus 26 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~ 104 (462)
T PF00171_consen 26 ATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEAR-GEVDRAIDFLRYYADAA 104 (462)
T ss_dssp BSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccccccc-chhhhhhhhhhhhhhcc
Confidence 45667776664 5578999999999999999999999999999999999999755 49999999999999999
Q ss_pred hhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 77 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
+++.+..++.+.+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~g 184 (462)
T PF00171_consen 105 RKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPG 184 (462)
T ss_dssp HHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTT
T ss_pred cceehhhcccccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhccccccccc
Confidence 88777666666788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 157 ~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+++++++++.+.+..|+.||+++.|.||||++++++|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|+
T Consensus 185 vv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~ 263 (462)
T PF00171_consen 185 VVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA-KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFF 263 (462)
T ss_dssp SEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH-TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHG
T ss_pred cccccccccccccceeeeccccceeeecchhhhhhhhhhhcc-cccccccccccccceeeEecccccccccccccchhcc
Confidence 999999988899999999999999999999999999999987 8899999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC---Cc
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KP 313 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg---~~ 313 (441)
|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||+++..+++++++++++++.+|+++++|| ..
T Consensus 264 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 343 (462)
T PF00171_consen 264 NSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEA 343 (462)
T ss_dssp GGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSB
T ss_pred cccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 33
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
....|+|++|||+.+++++|+++++|+||||++|++|+|.+||++++|+++|||+++|||+|.++++++++++++|+|+|
T Consensus 344 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~i 423 (462)
T PF00171_consen 344 DPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWI 423 (462)
T ss_dssp CSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEE
T ss_pred cccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceee
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCC-CCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 394 NCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 394 N~~~~~~~~-~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
|+++..... +||||+|.||+|+++|.+++++||+.|+|
T Consensus 424 N~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 424 NDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp SSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred cCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999875544 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-85 Score=665.34 Aligned_cols=411 Identities=30% Similarity=0.431 Sum_probs=383.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceeccccccccce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 94 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (441)
.|+.+++++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++....+..+.......+...+.
T Consensus 15 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (431)
T cd07095 15 GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVL 93 (431)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEE
Confidence 6889999999999999999999999999999999999999974 579999999999988877665544322223567788
Q ss_pred eecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh
Q 013526 95 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS 174 (441)
Q Consensus 95 ~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~ 174 (441)
.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++ +.+.+..|++
T Consensus 94 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~ 172 (431)
T cd07095 94 RHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAA 172 (431)
T ss_pred EEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeC-cHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 4567899999
Q ss_pred CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc-
Q 013526 175 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG- 253 (441)
Q Consensus 175 ~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~- 253 (441)
|+++|.|.||||+++++.|.+.++....+++++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++
T Consensus 173 ~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~ 252 (431)
T cd07095 173 HEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGA 252 (431)
T ss_pred CCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcc
Confidence 9999999999999999999998764557899999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCc
Q 013526 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 254 ~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 333 (441)
++++|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|+++++||...+++|+|++|||+ +++++|
T Consensus 253 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~ 331 (431)
T cd07095 253 VGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAA 331 (431)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999765557999999999 688999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC-CCCCCCccCCCCCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSG 412 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~p~GG~~~SG 412 (441)
.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||.|.||
T Consensus 332 ~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG 411 (431)
T cd07095 332 DVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSG 411 (431)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998765 44669999999999
Q ss_pred CCCcchHHHHHhhhhc
Q 013526 413 FGRDCGLESLHNYLQV 428 (441)
Q Consensus 413 ~g~~~g~~~l~~~t~~ 428 (441)
+|+++|.+++++|+.+
T Consensus 412 ~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 412 NHRPSAYYAADYCAYP 427 (431)
T ss_pred CCCCChHHHHHHHhhh
Confidence 9999999999955554
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-85 Score=675.98 Aligned_cols=428 Identities=29% Similarity=0.523 Sum_probs=396.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.++++++++ |+.++.++|.++|+++++.|++++++|+++++.|+|||+.+ +..|+..+++.++++++.
T Consensus 51 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~ 129 (500)
T cd07083 51 KADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARA 129 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 345666766664 56789999999999999999999999999999999999997 567999999999999988
Q ss_pred hhhhcCcee--ccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.+..+... +...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGl 209 (500)
T cd07083 130 ALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGF 209 (500)
T ss_pred HHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCC
Confidence 876654321 222455678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC------CceeeecCCCCceeecCCCCHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAA 227 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~------~~~~~e~gg~~~~iV~~dad~~~aa 227 (441)
|+|+|+++++++.+.+..|+.||++|.|.||||+.+++.|.+.++ .+. +|+++|+||+||+||++|+|++.|+
T Consensus 210 P~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa 288 (500)
T cd07083 210 PPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVV 288 (500)
T ss_pred CCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHH
Confidence 999999999977788999999999999999999999999999887 554 8999999999999999999999999
Q ss_pred HHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeE
Q 013526 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 307 (441)
Q Consensus 228 ~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v 307 (441)
+.+++++|.++||.|++++++|||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+| ++
T Consensus 289 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~v 367 (500)
T cd07083 289 EGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QL 367 (500)
T ss_pred HHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred ecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHh
Q 013526 308 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385 (441)
Q Consensus 308 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~ 385 (441)
++||....+.|+|+.|||+.+++++|+++++|+||||++|++|+ |++|||+++|+++|||+++|||+|.+.+++++++
T Consensus 368 l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 447 (500)
T cd07083 368 VLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARRE 447 (500)
T ss_pred EeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHh
Confidence 99998765568999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred ccceEEEEcCcCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEe
Q 013526 386 IRAGIIWINCYFAFD--SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 386 l~~g~v~vN~~~~~~--~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 434 (441)
+++|+|+||+..... +.+||||+|.||+| .++|.+++++||+.|+++.+
T Consensus 448 l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 448 FHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred CCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 999999999986633 57899999999999 58899999999999998764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-85 Score=677.78 Aligned_cols=428 Identities=34% Similarity=0.536 Sum_probs=395.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 69 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 147 (514)
T PRK03137 69 KATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQ 147 (514)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456677777764 567899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhc-CceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIH-GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+.+.. +.......+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|
T Consensus 148 ~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP 227 (514)
T PRK03137 148 MLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLP 227 (514)
T ss_pred HHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCC
Confidence 76653 32222224566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
+|++|++++++.+.+..|+.||+++.|.||||+.+|+.|.+.++. .+++|+++|+||+||+||++|||++.|++.
T Consensus 228 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~ 307 (514)
T PRK03137 228 AGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAES 307 (514)
T ss_pred CCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHH
Confidence 999999999777788999999999999999999999999998872 167999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||+++|++|+++|++.++++++|+|.++. ++||++++.+++++.+++++++++ +++++
T Consensus 308 i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~ 385 (514)
T PRK03137 308 IVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVL 385 (514)
T ss_pred HHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEe
Confidence 9999999999999999999999999999999999999999999999998 999999999999999999999987 59999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||......|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 386 Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G 465 (514)
T PRK03137 386 GGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVG 465 (514)
T ss_pred CCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcC
Confidence 99865557899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||+.... .+.+||||+|.||+| +.+|.+++++||+.|+++..
T Consensus 466 ~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 466 NLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred eEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence 9999987653 356899999999999 68999999999999998764
|
|
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-85 Score=678.01 Aligned_cols=427 Identities=36% Similarity=0.578 Sum_probs=393.9
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+
T Consensus 51 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~ 129 (524)
T PRK09407 51 STAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRA 129 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666555 4667899999999999999999999999999999999999974 579999999999999887
Q ss_pred hhhcCce-ecc--ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 77 DKIHGEV-LKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 77 ~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
++..+.. ... ......+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGl 209 (524)
T PRK09407 130 PKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGL 209 (524)
T ss_pred HHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 6654322 111 1124678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++++.+.++.|+.| +|.|.||||+++++.|.+.++ .+.+|+++|+|||||+||++|||++.|++.++++
T Consensus 210 P~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa-~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~ 286 (524)
T PRK09407 210 PRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRA 286 (524)
T ss_pred CcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHH
Confidence 9999999999777788889886 789999999999999999987 7889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..
T Consensus 287 ~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~ 366 (524)
T PRK09407 287 CFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKA 366 (524)
T ss_pred HHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CC-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 314 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 314 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.. ..|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 367 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~ 446 (524)
T PRK09407 367 RPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVN 446 (524)
T ss_pred CCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 33 25799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~---~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||+... ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 447 IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 447 VNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred ECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 999765 3457899999999999999999999999999998764
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-85 Score=667.05 Aligned_cols=422 Identities=35% Similarity=0.551 Sum_probs=391.1
Q ss_pred CCCHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhh
Q 013526 4 LPSRQHVRRLITV-----HGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 78 (441)
Q Consensus 4 ~~~~~~~~~a~~~-----~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~ 78 (441)
..+.+++++|++. +.+++++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.....
T Consensus 17 ~~~~~~v~~av~~A~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~ 95 (451)
T cd07146 17 AGTEEALREALALAASYRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALR 95 (451)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 3566777777643 35899999999999999999999999999999999999975 56999999999999887766
Q ss_pred hcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 79 IHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 79 ~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
..+...+.. .+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~agl 175 (451)
T cd07146 96 DDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175 (451)
T ss_pred hcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCc
Confidence 544433221 234567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++++.+.+..|+.||++|.|.||||+.+++.|.+.++ .+++++|+|||||+||++|||++.|++.++++
T Consensus 176 P~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~ 252 (451)
T cd07146 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAG 252 (451)
T ss_pred CccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHH
Confidence 999999999977788999999999999999999999999998764 57999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|+++||.|+++++||||++++++|+++|+++++++++|+|.|+++.+||++++.+++++++++++++++|+++++||..
T Consensus 253 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~ 332 (451)
T cd07146 253 SYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR 332 (451)
T ss_pred HHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+|
T Consensus 333 ---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~i 409 (451)
T cd07146 333 ---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNV 409 (451)
T ss_pred ---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC-CCCCCCccCCCCCCC-CCcchHHHHHhhhhccEEE
Q 013526 394 NCYFA-FDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 394 N~~~~-~~~~~p~GG~~~SG~-g~~~g~~~l~~~t~~k~v~ 432 (441)
|+.+. ..+.+||||+|+||+ |+++|.+|+++||+.|+++
T Consensus 410 N~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 410 NEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99755 346799999999995 8999999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-85 Score=669.48 Aligned_cols=426 Identities=40% Similarity=0.697 Sum_probs=395.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh-hhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.++++++++ |+.+++++|.++|+++++.|++++++|++++++|+|||. .+ +..|+..+++.+++++.
T Consensus 15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-a~~ev~~~~~~~~~~~~ 93 (457)
T cd07108 15 RSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQ-ARPEAAVLADLFRYFGG 93 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHH-HHHHHHHHHHHHHHHHH
Confidence 356677776664 557899999999999999999999999999999999997 55 45799999999999998
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
......+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP 172 (457)
T cd07108 94 LAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LP 172 (457)
T ss_pred HHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CC
Confidence 87666555544334455678899999999999999999999999999999999999999999999999999999987 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.|+++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++
T Consensus 173 ~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~ 251 (457)
T cd07108 173 AGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGM 251 (457)
T ss_pred cCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhh
Confidence 99999999877778899999999999999999999999999987 78899999999999999999999999999999994
Q ss_pred -hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHH-cCCeEecCCC
Q 013526 235 -LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGK 312 (441)
Q Consensus 235 -~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~ 312 (441)
|.|+||.|+++++||||++++++|+++|++.++++++|+|.++++++||++++.++++++++++++++ +|+++++||.
T Consensus 252 ~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~ 331 (457)
T cd07108 252 RFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGP 331 (457)
T ss_pred HhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 9999999997
Q ss_pred cCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 313 PIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 313 ~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++
T Consensus 332 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~ 411 (457)
T cd07108 332 LPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEA 411 (457)
T ss_pred cCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCc
Confidence 642 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHH-HHhhhhccEEE
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV 432 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~-l~~~t~~k~v~ 432 (441)
|.|+||++....+.+||||.|+||+|+++|.++ +++||+.|+++
T Consensus 412 g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 412 GWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred ceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 999999998777889999999999999999866 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-85 Score=668.48 Aligned_cols=424 Identities=35% Similarity=0.553 Sum_probs=394.1
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+ ...|+..+++.++++++.+
T Consensus 15 ~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~ 93 (453)
T cd07099 15 TDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRAD-AGLEVLLALEAIDWAARNA 93 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4556666655 456789999999999999999999999999999999999995 6679999999999999887
Q ss_pred hhhcCc-eecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 77 DKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 77 ~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
.++.+. ..+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..|++++.++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag 173 (453)
T cd07099 94 PRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAG 173 (453)
T ss_pred HHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcC
Confidence 665432 2221 135677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++++ +.+..|+.| .+|.|.||||+++++.|.+.++ .+.+|+++|+||+||+||++|+|++.|++.+++
T Consensus 174 ~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~ 250 (453)
T cd07099 174 PPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGKDPMIVLADADLERAAAAAVW 250 (453)
T ss_pred CCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHH
Confidence 9999999999965 678888887 4999999999999999999988 778999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.++||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 251 ~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~ 330 (453)
T cd07099 251 GAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGA 330 (453)
T ss_pred HHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.....|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|++++||++||||+|.+.++++++++++|.|+
T Consensus 331 ~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~ 410 (453)
T cd07099 331 RSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410 (453)
T ss_pred cCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEE
Confidence 65346899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 393 INCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+..+ ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 411 iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 411 INDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred ECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999865 4578999999999999999999999999999975
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-85 Score=669.17 Aligned_cols=415 Identities=43% Similarity=0.693 Sum_probs=389.4
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+
T Consensus 55 ~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 134 (480)
T cd07111 55 QAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGW 134 (480)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777766 4667899999999999999999999999999999999999976556999999999988777
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+...+ ....++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+
T Consensus 135 ~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~ 204 (480)
T cd07111 135 AQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPP 204 (480)
T ss_pred HHHhcC----------CcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCc
Confidence 654321 2345799999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+++++++++ +.+..|+.||++|.|.||||+.+++.|.+.++ ..++|+++|+|||||+||++|+|++.|++.+++++|
T Consensus 205 gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f 282 (480)
T cd07111 205 GVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATA-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIW 282 (480)
T ss_pred ccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHH
Confidence 9999999854 67899999999999999999999999999987 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||....
T Consensus 283 ~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~ 362 (480)
T cd07111 283 FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLP 362 (480)
T ss_pred hcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
+.|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+
T Consensus 363 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~ 442 (480)
T cd07111 363 SKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWING 442 (480)
T ss_pred CCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccE
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~ 430 (441)
.....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 443 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 443 HNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 88877789999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-85 Score=668.20 Aligned_cols=422 Identities=35% Similarity=0.576 Sum_probs=390.4
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 95 (452)
T cd07147 17 LAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA-RGEVARAIDTFRIAAEE 95 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35566666665 3557899999999999999999999999999999999999974 56999999999999887
Q ss_pred hhhhcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ 175 (452)
T cd07147 96 ATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAE 175 (452)
T ss_pred HHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 765544332211 244567889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+|++++++ .+.+..|+.||++|.|.||||+.+++.|.+.++ .+|+++|+|||||+||++|+|++.|++.+
T Consensus 176 ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i 251 (452)
T cd07147 176 TGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRI 251 (452)
T ss_pred cCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC---cCceEeecCCCCcEEECCCCCHHHHHHHH
Confidence 99999999999984 467889999999999999999999999999865 36999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++|
T Consensus 252 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~g 331 (452)
T cd07147 252 IFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTG 331 (452)
T ss_pred HHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
|.. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+
T Consensus 332 g~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~ 408 (452)
T cd07147 332 GKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGG 408 (452)
T ss_pred CCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcce
Confidence 975 58899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 391 IWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 391 v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|+||+.+.. .+.+||||+|+||+|+++|.+|+++||+.|+|++
T Consensus 409 v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 409 VVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred EEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999997664 4679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-85 Score=668.12 Aligned_cols=428 Identities=46% Similarity=0.778 Sum_probs=401.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.++++++++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~ 94 (455)
T cd07093 15 EGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADY 94 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677777664 557899999999999999999999999999999999999876667999999999999887
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
..+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~ 174 (455)
T cd07093 95 ILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPP 174 (455)
T ss_pred HHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCc
Confidence 76654444443346677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+|+++++++.+....|+.|++++.|.||||+.+++.|.+.++ +.++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 175 g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~ 253 (455)
T cd07093 175 GVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSF 253 (455)
T ss_pred cceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHh-hcccceEeecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 9999999877778899999999999999999999999999988 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.++||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++.+++++++.+|+++++||....
T Consensus 254 ~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 333 (455)
T cd07093 254 SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPE 333 (455)
T ss_pred hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
..|+|+.|||+.+++++++++++|+||||++|++|+|.+|||+++|+.++||+++|||+|.+.++++++++++|+|
T Consensus 334 ~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v 413 (455)
T cd07093 334 LPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTV 413 (455)
T ss_pred cccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 3589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||+.....+.+||||.|+||+|+++|.+++++|++.|+++
T Consensus 414 ~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 414 WVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred EECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 99999887788999999999999999999999999999875
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-85 Score=663.96 Aligned_cols=424 Identities=26% Similarity=0.379 Sum_probs=388.9
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
+..+++++|++ |+.++..+|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.++++++..
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666664 5578999999999999999999999999999999999999755579999999999999877
Q ss_pred hhhcCc---eecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 77 DKIHGE---VLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 77 ~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
++..+. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~- 161 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY- 161 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-
Confidence 665432 1121 13446688999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecC---CCCHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTAADM 229 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~---dad~~~aa~~ 229 (441)
+|+|++|++++ +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ..++|+++|+||+||+||++ |+|++.|++.
T Consensus 162 lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~ 238 (484)
T PLN02203 162 LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVAVNR 238 (484)
T ss_pred CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHHHHH
Confidence 99999999998 778899999995 999999999999999999988 78999999999999999997 6999999999
Q ss_pred HHHHHhh-ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 230 ALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 230 i~~~~~~-~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
+++++|. |+||.|++++++|||++++++|+++|.+.+.++++|+|.++ +++||++++.+++++++++++++.+ ++++
T Consensus 239 i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~ 316 (484)
T PLN02203 239 IVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIV 316 (484)
T ss_pred HHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEE
Confidence 9999996 89999999999999999999999999999999999999886 6899999999999999999999987 6899
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||... +.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++
T Consensus 317 ~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~ 395 (484)
T PLN02203 317 HGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSS 395 (484)
T ss_pred eCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 998753 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||++.. ..+.+||||+|+||+|+++|.+++++||+.|+++++.
T Consensus 396 G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 396 GSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999854 3477999999999999999999999999999998763
|
|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=666.52 Aligned_cols=427 Identities=43% Similarity=0.704 Sum_probs=400.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.++++++++ |+.++.++|.++|+++++.|.+++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~~~~ 93 (451)
T cd07103 15 DAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEE 93 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356667766664 56789999999999999999999999999999999999997 456999999999999888
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+...+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP 173 (451)
T cd07103 94 ARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLP 173 (451)
T ss_pred HHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCC
Confidence 766555444332 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.|+++|.|.||||+.+++.|.+.++ ..++|+++|+|||||+||++|||++.|++.|++++
T Consensus 174 ~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~ 252 (451)
T cd07103 174 AGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASK 252 (451)
T ss_pred cccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999977778899999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|++.++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...
T Consensus 253 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~ 332 (451)
T cd07103 253 FRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRL 332 (451)
T ss_pred HHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
..+|+|+.|||+.++++++.++++|+||||++|++|+|.+||++++|++++||+++|||+|.+.++++++++++|.|+||
T Consensus 333 ~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN 412 (451)
T cd07103 333 GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGIN 412 (451)
T ss_pred CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
++....+.+||||.|.||+|+++|++++++||+.|++.
T Consensus 413 ~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 413 TGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred CCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99877788999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-84 Score=662.46 Aligned_cols=413 Identities=39% Similarity=0.641 Sum_probs=390.5
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceeccc-cccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGY 93 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 93 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+||+..+ ...|+..+++.+++++....+..+...+.. .+...+
T Consensus 15 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~ 93 (431)
T cd07104 15 AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPK-AAFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESM 93 (431)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeE
Confidence 578899999999999999999999999999999999999996 456999999999999888766555444333 456778
Q ss_pred eeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHH-HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHH
Q 013526 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 172 (441)
Q Consensus 94 ~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~-~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l 172 (441)
.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|+++++++++.+.+..|
T Consensus 94 ~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L 173 (431)
T cd07104 94 VRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDAL 173 (431)
T ss_pred EEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHH
Confidence 99999999999999999999999999999999999999999999998 67899999999999999999999777788999
Q ss_pred HhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeC
Q 013526 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252 (441)
Q Consensus 173 ~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~ 252 (441)
+.|+++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|+|++.|++.|++++|+|+||.|+++++||||+
T Consensus 174 ~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~ 252 (431)
T cd07104 174 VEHPRVRMISFTGSTAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHE 252 (431)
T ss_pred hcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcH
Confidence 99999999999999999999999988 78999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCC
Q 013526 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 332 (441)
Q Consensus 253 ~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~ 332 (441)
+++++|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++
T Consensus 253 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~ 329 (431)
T cd07104 253 SVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPD 329 (431)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999975 5899999999999999
Q ss_pred ccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCC-CCCCccCCCCC
Q 013526 333 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMS 411 (441)
Q Consensus 333 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~p~GG~~~S 411 (441)
++++++|+||||++|++|+|.+|||+++|++++||+++|||+|.++++++++++++|+|+||++.... +.+||||+|.|
T Consensus 330 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~S 409 (431)
T cd07104 330 MPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKAS 409 (431)
T ss_pred ChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988754 78999999999
Q ss_pred CCCCcchHHHHHhhhhccEEE
Q 013526 412 GFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 412 G~g~~~g~~~l~~~t~~k~v~ 432 (441)
|+|+++|.+++++||+.|+++
T Consensus 410 G~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 410 GGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred cCCccchHHHHHHhhceeEEe
Confidence 999999999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-84 Score=665.57 Aligned_cols=427 Identities=31% Similarity=0.472 Sum_probs=394.4
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++++ .|+.++..+|.++|+++++.|.+++++|+++++.|+|||+.++ ..|+..+++.+++++...
T Consensus 35 ~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~ 113 (477)
T TIGR01722 35 ASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVN 113 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4566666665 3557899999999999999999999999999999999999974 579999999999998877
Q ss_pred hhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
....+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+
T Consensus 114 ~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~ 193 (477)
T TIGR01722 114 SLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPD 193 (477)
T ss_pred HHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCC
Confidence 66655443321 34456778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.+..|+.||+++.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 194 g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~-~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f 271 (477)
T TIGR01722 194 GVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS-AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAY 271 (477)
T ss_pred CeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 99999998 5567889999999999999999999999999877 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||....
T Consensus 272 ~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~ 350 (477)
T TIGR01722 272 GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYK 350 (477)
T ss_pred HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999997531
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
++|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|
T Consensus 351 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v 430 (477)
T TIGR01722 351 VDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQV 430 (477)
T ss_pred CCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeE
Confidence 3589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeC
Q 013526 392 WINCYFA-FDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 392 ~vN~~~~-~~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+||+... ..+.+||||+|.||+| +++|.+++++||+.|++++++
T Consensus 431 ~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 431 GVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred EECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 9998655 3467899999999999 578999999999999998763
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=659.47 Aligned_cols=418 Identities=28% Similarity=0.425 Sum_probs=383.9
Q ss_pred CHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhh
Q 013526 6 SRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 77 (441)
Q Consensus 6 ~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~ 77 (441)
+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++..++
T Consensus 3 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~ 82 (436)
T cd07135 3 PLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLK 82 (436)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 455566655 456789999999999999999999999999999999999997544699999999999998876
Q ss_pred hhcCc-eeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 78 KIHGE-VLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 78 ~~~~~-~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
++... ..... .+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~ 161 (436)
T cd07135 83 KWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-Y 161 (436)
T ss_pred HhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-h
Confidence 65332 11111 244678899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++.+.+. ..|+.|+ +|.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++
T Consensus 162 lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~ 238 (436)
T cd07135 162 LDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238 (436)
T ss_pred CCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence 9999999999855454 5688999 999999999999999999887 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+++||.|+++++||||++++++|+++|++.++++++|+| ++++++||++++.+++++.++++++ |+++++||.
T Consensus 239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 999999999999999999999999999999999999999999 8999999999999999999999987 789999997
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... +|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 315 ~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~ 393 (436)
T cd07135 315 MDE-ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVV 393 (436)
T ss_pred cCC-CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEE
Confidence 653 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 393 INCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 393 vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+... ..+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 394 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 394 INDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred ECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 998765 3578999999999999999999999999999863
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-84 Score=663.91 Aligned_cols=421 Identities=26% Similarity=0.408 Sum_probs=384.5
Q ss_pred CHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhh
Q 013526 6 SRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 77 (441)
Q Consensus 6 ~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~ 77 (441)
+.++++++++ |+.++.++|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..+
T Consensus 5 ~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~ 84 (493)
T PTZ00381 5 NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLD 84 (493)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555553 55789999999999999999999999999999999999998766799999999999888776
Q ss_pred hhcC-ceecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 78 KIHG-EVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 78 ~~~~-~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+... ..... ......+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.++.+++.++ +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-l 163 (493)
T PTZ00381 85 EYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-L 163 (493)
T ss_pred HHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-C
Confidence 5432 21111 12345788999999999999999999999999999999999999999999999999999999996 9
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+++++++ +.+.+..|+.|+ +|.|.||||+.+|+.|++.++ .+++|+++|+||+||+||++|||++.|++.|+++
T Consensus 164 p~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g 240 (493)
T PTZ00381 164 DPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWG 240 (493)
T ss_pred CcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHH
Confidence 9999999998 667788898987 999999999999999999987 7899999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|++++++|||++++++|+++|++.++++. |++.++++++||+++.++++++.+++++ +|+++++||..
T Consensus 241 ~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~gG~~ 316 (493)
T PTZ00381 241 KFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEV 316 (493)
T ss_pred HHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEECCCc
Confidence 9999999999999999999999999999999999986 6666788999999999999999999963 68899999976
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
+ ..+.|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|.|+|
T Consensus 317 ~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~I 395 (493)
T PTZ00381 317 D-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVI 395 (493)
T ss_pred C-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 4 368899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+... ..+.+||||+|+||+|+++|.+|+++||+.|+|+.+.
T Consensus 396 N~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 396 NDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred CCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 99865 4578999999999999999999999999999998764
|
|
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-84 Score=664.54 Aligned_cols=430 Identities=29% Similarity=0.412 Sum_probs=390.0
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~ 109 (484)
T TIGR03240 31 AASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWET-RTEVASMIGKVAISIKA 109 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 34566666665 3567899999999999999999999999999999999999974 57999999999988776
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.....+.......+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~ 189 (484)
T TIGR03240 110 YHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPA 189 (484)
T ss_pred HHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCc
Confidence 65554433211223456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|+||++++ +.+.++.|+.||++|.|.||||+++|+.|.+.++....+++++|+|||||+||++|||++.|++.+++++|
T Consensus 190 gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~ 268 (484)
T TIGR03240 190 GVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAF 268 (484)
T ss_pred ccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH
Confidence 99999998 56788999999999999999999999999998763456889999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccH-HHHHHHHHHHHhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 236 FNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~-~~f~~~L~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
.|+||.|+++++||||++++ ++|+++|.+.++++++|+| .++++++||++++.+++++.+++++++++|+++++||..
T Consensus 269 ~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 348 (484)
T TIGR03240 269 ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQ 348 (484)
T ss_pred hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999985 9999999999999999997 578889999999999999999999999999999998875
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.++.++|++|||+ +++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 349 ~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~i 427 (484)
T TIGR03240 349 LDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNW 427 (484)
T ss_pred CCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEE
Confidence 4446899999999 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCC
Q 013526 394 NCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 437 (441)
Q Consensus 394 N~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~ 437 (441)
|+... ..+.+||||+|.||+|+++|.++++ |++.|+++++..+
T Consensus 428 N~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~~~ 471 (484)
T TIGR03240 428 NKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEADS 471 (484)
T ss_pred ECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEeccc
Confidence 98765 4467899999999999999966655 9999999998643
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-84 Score=663.18 Aligned_cols=428 Identities=33% Similarity=0.540 Sum_probs=391.3
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|.+++++|++++++|+|||..++...|+..+++.+++++...
T Consensus 15 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~ 94 (465)
T cd07098 15 DTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHG 94 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666555 46678999999999999999999999999999999999999866679999999999998776
Q ss_pred hhhc-Cceeccc---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHH----H
Q 013526 77 DKIH-GEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----A 148 (441)
Q Consensus 77 ~~~~-~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~----l 148 (441)
++.. +...+.. .+...++.++|+||+++|+|||||+..++.++++||++||+||+|||+.+|+++..++++ |
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l 174 (465)
T cd07098 95 EKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECL 174 (465)
T ss_pred HHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHH
Confidence 5532 2222211 133467889999999999999999999999999999999999999999999999876554 5
Q ss_pred HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 149 ~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
.++|+|+|++|++++++ +.++.|+.||+++.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|+|++.|++
T Consensus 175 ~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~a~~ 252 (465)
T cd07098 175 AACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAA-ESLTPVVLELGGKDPAIVLDDADLDQIAS 252 (465)
T ss_pred HhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHH
Confidence 78999999999999954 78899999999999999999999999999987 78999999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.|++++|.++||.|+++++||||++++++|+++|+++++.+++|+|.++++++||++++.+++++++++++++.+|++++
T Consensus 253 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~ 332 (465)
T cd07098 253 IIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLL 332 (465)
T ss_pred HHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH
Q 013526 309 TGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384 (441)
Q Consensus 309 ~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 384 (441)
+||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|.+||++++|+++|||++||||+|.+.++++++
T Consensus 333 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~ 412 (465)
T cd07098 333 AGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIAS 412 (465)
T ss_pred eCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 9986532 258999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEEEEcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 385 SIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 385 ~l~~g~v~vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++++|.|+||+..+ ..+..||||+|.||+|+++|.+++++||+.|+++++
T Consensus 413 ~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 413 QLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred hCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999764 347899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-84 Score=664.81 Aligned_cols=423 Identities=30% Similarity=0.451 Sum_probs=389.2
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.++++++++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+
T Consensus 50 a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~ 128 (496)
T PLN00412 50 CTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVVRSGDLISYTAEEG 128 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 46666766653 667899999999999999999999999999999999999975 579999999999998776
Q ss_pred hhhc--Cceecc---c---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH
Q 013526 77 DKIH--GEVLKM---S---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 148 (441)
Q Consensus 77 ~~~~--~~~~~~---~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l 148 (441)
.+.. +...+. + .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l 208 (496)
T PLN00412 129 VRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCF 208 (496)
T ss_pred HHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHH
Confidence 5542 222211 1 1224567899999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 149 ~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
.++|+|++++|++++++.+.+..|..||+++.|.|||| .+++.+.+.++ .+|+++|+|||||+||++|||++.|++
T Consensus 209 ~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~ 284 (496)
T PLN00412 209 HLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAA 284 (496)
T ss_pred HHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHH
Confidence 99999999999999876778999999999999999999 99999998763 689999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|+|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.+++++++.+|++++
T Consensus 285 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l 363 (496)
T PLN00412 285 NIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFC 363 (496)
T ss_pred HHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999999999999999999987 7899999999999999999999999999999
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||.. .|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++
T Consensus 364 ~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~ 440 (496)
T PLN00412 364 QEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMET 440 (496)
T ss_pred ecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 98753 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|++++++.
T Consensus 441 G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~ 489 (496)
T PLN00412 441 GTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLP 489 (496)
T ss_pred ceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEecC
Confidence 9999999865 44679999999999999999999999999999988764
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-84 Score=654.80 Aligned_cols=416 Identities=26% Similarity=0.396 Sum_probs=382.3
Q ss_pred HHHHH-HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-e--ec
Q 013526 10 VRRLI-TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-V--LK 85 (441)
Q Consensus 10 ~~~a~-~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~--~~ 85 (441)
.++|. .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+....|+..+++.+++++..+.+..+. . .+
T Consensus 8 a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (432)
T cd07137 8 LRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTP 87 (432)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 33444 58899999999999999999999999999999999999998754569999999999998877554332 1 11
Q ss_pred c-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 86 M-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 86 ~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
. ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|++++
T Consensus 88 ~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g- 165 (432)
T cd07137 88 LTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG- 165 (432)
T ss_pred cccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-
Confidence 1 12235678999999999999999999999999999999999999999999999999999999995 99999999998
Q ss_pred chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh-hccCCCcc
Q 013526 165 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-FNKGEICV 243 (441)
Q Consensus 165 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~-~~~Gq~C~ 243 (441)
+.+.+..|+.| .++.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++| +|+||.|+
T Consensus 166 ~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~ 243 (432)
T cd07137 166 GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACI 243 (432)
T ss_pred CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCccc
Confidence 55678888887 5999999999999999999987 789999999999999999999999999999999999 59999999
Q ss_pred cCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeec
Q 013526 244 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323 (441)
Q Consensus 244 ~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~P 323 (441)
+++++|||++++++|+++|.++++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .+|+|++|
T Consensus 244 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~~~~P 320 (432)
T cd07137 244 APDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNLYIEP 320 (432)
T ss_pred CCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCCEEee
Confidence 9999999999999999999999999999999 468999999999999999999999998 89999999763 36899999
Q ss_pred EEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCC
Q 013526 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDS 401 (441)
Q Consensus 324 tvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~ 401 (441)
||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+
T Consensus 321 tvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~ 400 (432)
T cd07137 321 TILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAID 400 (432)
T ss_pred EEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999765 347
Q ss_pred CCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 402 DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 402 ~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 401 ~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 401 TLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 8999999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-84 Score=656.21 Aligned_cols=412 Identities=36% Similarity=0.553 Sum_probs=384.8
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceeccc-cccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGY 93 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 93 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..+ ...|+..+++.++++++..++..+...+.. .+...+
T Consensus 15 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (432)
T cd07105 15 AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAW-AGFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAM 93 (432)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCceeE
Confidence 588999999999999999999999999999999999999875 456999999999999988776544433322 345567
Q ss_pred eeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHH
Q 013526 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGA 170 (441)
Q Consensus 94 ~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~---~~~~~~ 170 (441)
.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++++ +.+.+.
T Consensus 94 ~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~ 173 (432)
T cd07105 94 VVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVE 173 (432)
T ss_pred EEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999974 235789
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 250 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V 250 (441)
.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|+|++.|++.|++++|+|+||.|++++++||
T Consensus 174 ~l~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V 252 (432)
T cd07105 174 ALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIV 252 (432)
T ss_pred HHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEE
Confidence 9999999999999999999999999987 789999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC-CCCceeecEEEeeC
Q 013526 251 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNV 329 (441)
Q Consensus 251 ~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~ 329 (441)
|+++|++|+++|+++++++++| .+++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.++
T Consensus 253 ~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~ 327 (432)
T cd07105 253 HESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNV 327 (432)
T ss_pred cHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecC
Confidence 9999999999999999999988 57899999999999999999999999999999998653 36899999999999
Q ss_pred CCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCC-CCCCCccCC
Q 013526 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGY 408 (441)
Q Consensus 330 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~p~GG~ 408 (441)
+++|.++++|+||||++|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+
T Consensus 328 ~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~ 407 (432)
T cd07105 328 TPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGV 407 (432)
T ss_pred CCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998764 478999999
Q ss_pred CCCCCCCcchHHHHHhhhhccEEEE
Q 013526 409 KMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 409 ~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
|.||+|+++|.+++++||+.|++++
T Consensus 408 ~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 408 KSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred ccccccccChHHHHHHhhceEEEeC
Confidence 9999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-84 Score=655.82 Aligned_cols=409 Identities=31% Similarity=0.450 Sum_probs=380.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-eeccc---ccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS---RAL 90 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~ 90 (441)
.|+.+++.+|.++|+++++.|++++++|+++++.|+|||+.++...|+..+++.+++++..++...+. ..+.. .+.
T Consensus 13 ~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (449)
T cd07136 13 TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPS 92 (449)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCc
Confidence 68999999999999999999999999999999999999999765569999999999999887665432 22211 245
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~ 170 (441)
..+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++ +.+.+.
T Consensus 93 ~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~ 170 (449)
T cd07136 93 KSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQ 170 (449)
T ss_pred eeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHH
Confidence 6788999999999999999999999999999999999999999999999999999999998 99999999998 556678
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 250 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V 250 (441)
.|+.|+ +|.|.||||+++|+.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++||
T Consensus 171 ~L~~~~-v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V 248 (449)
T cd07136 171 ELLDQK-FDYIFFTGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLV 248 (449)
T ss_pred HHhcCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEE
Confidence 888776 999999999999999999987 788999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCC
Q 013526 251 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 330 (441)
Q Consensus 251 ~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 330 (441)
|++++++|+++|++.+++++.|+|.+ ++++||++++.++++++++++++ ++++||.... +|+|+.|||+.+++
T Consensus 249 ~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~-~g~~~~Ptvl~~v~ 321 (449)
T cd07136 249 HESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR-ETLYIEPTILDNVT 321 (449)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC-CCCEEeeEEEecCC
Confidence 99999999999999999999999987 88999999999999999999874 8999997643 68999999999999
Q ss_pred CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCCCCCccCC
Q 013526 331 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGY 408 (441)
Q Consensus 331 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~p~GG~ 408 (441)
++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+
T Consensus 322 ~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~ 401 (449)
T cd07136 322 WDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGV 401 (449)
T ss_pred CcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 3478999999
Q ss_pred CCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 409 KMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 409 ~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|.||+|+++|.+++++||+.|+|+++
T Consensus 402 k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 402 GNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred CcccCCcccCHHHHHHhccceEEEEc
Confidence 99999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-84 Score=653.59 Aligned_cols=417 Identities=29% Similarity=0.421 Sum_probs=382.6
Q ss_pred HHHHH-HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-hhhhhhccHHHHHHHHHHHHHhhhhhcCcee-cc
Q 013526 10 VRRLI-TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM 86 (441)
Q Consensus 10 ~~~a~-~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~ 86 (441)
.++|. .|+.++..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.+++++..+.+..+... ..
T Consensus 7 a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (434)
T cd07133 7 QKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHV 86 (434)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 33433 589999999999999999999999999999999999986 5555567999999999999987765433221 11
Q ss_pred c---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013526 87 S---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 163 (441)
Q Consensus 87 ~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~ 163 (441)
. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+|+++++
T Consensus 87 ~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g 165 (434)
T cd07133 87 GLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG 165 (434)
T ss_pred ccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC
Confidence 1 2345688999999999999999999999999999999999999999999999999999999997 99999999998
Q ss_pred CchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcc
Q 013526 164 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 243 (441)
Q Consensus 164 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~ 243 (441)
+.+.+..|+.|+ +|.|.||||+.+++.|.+.++ ..++|+++|+||+||+||++|+|++.|++.+++++|+|+||.|+
T Consensus 166 -~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~ 242 (434)
T cd07133 166 -GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCV 242 (434)
T ss_pred -ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCccc
Confidence 556788888776 999999999999999999987 78899999999999999999999999999999999999999999
Q ss_pred cCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC--CCCcee
Q 013526 244 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYI 321 (441)
Q Consensus 244 ~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~ 321 (441)
+++++|||++++++|+++|+++++++++|+ ++++++||++++.+++++++++++++.+|+++++||.... .+|+|+
T Consensus 243 a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~ 320 (434)
T cd07133 243 APDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKL 320 (434)
T ss_pred CCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEE
Confidence 999999999999999999999999999886 4678999999999999999999999999999999987643 368999
Q ss_pred ecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--C
Q 013526 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--F 399 (441)
Q Consensus 322 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~ 399 (441)
+|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. .
T Consensus 321 ~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~ 400 (434)
T cd07133 321 PPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVA 400 (434)
T ss_pred eeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864 4
Q ss_pred CCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 400 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 400 ~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
.+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 401 ~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 401 QDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 478999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=666.02 Aligned_cols=429 Identities=32% Similarity=0.452 Sum_probs=394.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||+.++ ..|+..+++.++++++.
T Consensus 65 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~ 143 (518)
T cd07125 65 LADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQ 143 (518)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356667777664 557899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCc-eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+. ..+.+.+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 144 ~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP 223 (518)
T cd07125 144 ARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVP 223 (518)
T ss_pred HHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCC
Confidence 8765433 333334667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+++++++++.+.+..|+.|+++|.|.||||+.+++.|.+.++.. ..+|+++|+||+||+||++|||++.|++.|++
T Consensus 224 ~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~ 303 (518)
T cd07125 224 RDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQ 303 (518)
T ss_pred CCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHH
Confidence 9999999996666889999999999999999999999999987622 27899999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.. +++++||.
T Consensus 304 g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~ 382 (518)
T cd07125 304 SAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAP 382 (518)
T ss_pred HHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999884 68999987
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
.....|+|++|||+.++ +|+++++|+||||++|++|+ |++|||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 383 ~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~ 460 (518)
T cd07125 383 LDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGN 460 (518)
T ss_pred cCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCe
Confidence 64336899999999888 89999999999999999999 999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~--~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||+..+. .+.+||||+|.||+|. .+|.+++++||+.|+++++++
T Consensus 461 V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 461 LYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred EEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEcc
Confidence 999998763 3678999999999995 788999999999999998764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-83 Score=657.55 Aligned_cols=411 Identities=26% Similarity=0.334 Sum_probs=371.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcC--------ceeccc
Q 013526 16 VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMS 87 (441)
Q Consensus 16 ~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~ 87 (441)
|+.+++.+|.++|+++++.|++++++|+++ +.|+|||+.++ ..|+..+++.++++++++++..+ ...+..
T Consensus 53 W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea-~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~ 130 (513)
T cd07128 53 LRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDS-WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS 130 (513)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC
Confidence 567799999999999999999999999996 99999999874 57999999999999998766532 222221
Q ss_pred c-c-cccceeecc-cceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEeC
Q 013526 88 R-A-LQGYTLREP-IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPG 163 (441)
Q Consensus 88 ~-~-~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~~ 163 (441)
. + ...+.+++| +|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|++++
T Consensus 131 ~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g 210 (513)
T cd07128 131 KDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG 210 (513)
T ss_pred CCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecC
Confidence 1 2 135678999 599999999999999999999999999999999999999999999999999999 89999999998
Q ss_pred CchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHh-hcCCCceeeecCCCCceeecCCCC-----HHHHHHHHHHHHhhc
Q 013526 164 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFN 237 (441)
Q Consensus 164 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----~~~aa~~i~~~~~~~ 237 (441)
.+.++...+ +.+|.|.||||+++|+.|.+.++ ...++|+++|+|||||+||++||| ++.+++.+++++|.|
T Consensus 211 ~~~~~~~~l---~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~ 287 (513)
T cd07128 211 SVGDLLDHL---GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVK 287 (513)
T ss_pred ChHHHhccc---CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHh
Confidence 543333322 57899999999999999999852 367899999999999999999999 999999999999999
Q ss_pred cCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC---
Q 013526 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--- 314 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--- 314 (441)
+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++ +++++||...
T Consensus 288 aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~ 366 (513)
T cd07128 288 AGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEV 366 (513)
T ss_pred cCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999988 9999999752
Q ss_pred ----CCCCceeecEEEeeCCC--CccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-
Q 013526 315 ----GKKGYYIEPTIFTNVTE--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR- 387 (441)
Q Consensus 315 ----~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~- 387 (441)
...|+|++|||+.++++ +|.++++|+||||++|++|+|.+||++++|+++|||++||||+|.+++++++++++
T Consensus 367 ~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~ 446 (513)
T cd07128 367 VGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAP 446 (513)
T ss_pred cCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHh
Confidence 13689999999998887 48999999999999999999999999999999999999999999999999999997
Q ss_pred -ceEEEEcCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhhccEEE
Q 013526 388 -AGIIWINCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVV 432 (441)
Q Consensus 388 -~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~-~g~~~l~~~t~~k~v~ 432 (441)
+|+|+||+..+ ..+.+||||+|.||+|++ +|.+++++|++.|+|.
T Consensus 447 ~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 447 YHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred hCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 99999998752 246789999999999998 4799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-83 Score=647.42 Aligned_cols=414 Identities=28% Similarity=0.423 Sum_probs=385.3
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcC-ceeccc---cc
Q 013526 14 ITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMS---RA 89 (441)
Q Consensus 14 ~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~---~~ 89 (441)
..|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++.......+ ...+.+ .+
T Consensus 12 ~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (433)
T cd07134 12 LALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFG 91 (433)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCC
Confidence 37999999999999999999999999999999999999999975457999999999998877654322 212111 34
Q ss_pred cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHH
Q 013526 90 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169 (441)
Q Consensus 90 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~ 169 (441)
...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+++++++ +.+.+
T Consensus 92 ~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~ 169 (433)
T cd07134 92 TKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVA 169 (433)
T ss_pred CceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHH
Confidence 56789999999999999999999999999999999999999999999999999999999999 99999999998 55778
Q ss_pred HHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEE
Q 013526 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249 (441)
Q Consensus 170 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~ 249 (441)
..|+.|+ ++.|.||||+.+++.|.+.++ ...+|+++|+||+||+||++|||++.|++.+++++|+++||.|++++++|
T Consensus 170 ~~l~~~~-v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~ 247 (433)
T cd07134 170 QALLELP-FDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVF 247 (433)
T ss_pred HHHHhCC-CCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEE
Confidence 8999998 999999999999999999987 77899999999999999999999999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEee
Q 013526 250 VQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 328 (441)
Q Consensus 250 V~~~~~~~f~~~L~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 328 (441)
||++++|+|+++|+++++++..|+| .++++++||++++.+++++++++++++++|+++++||.... .|+|++|||+.+
T Consensus 248 V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~-~g~~~~Ptvl~~ 326 (433)
T cd07134 248 VHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA-AQRYIAPTVLTN 326 (433)
T ss_pred ECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC-CCCEEeeEEEeC
Confidence 9999999999999999999988887 88899999999999999999999999999999999997643 689999999999
Q ss_pred CCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCCCCCcc
Q 013526 329 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYG 406 (441)
Q Consensus 329 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~p~G 406 (441)
++++|+++++|+||||++|++|+|.+|+|+++|+++|||++||||+|.+.++++++++++|.|+||+.+. ..+.+|||
T Consensus 327 ~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfG 406 (433)
T cd07134 327 VTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFG 406 (433)
T ss_pred CCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999865 34789999
Q ss_pred CCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 407 GYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 407 G~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
|+|+||+|+++|.+++++||+.|+++
T Consensus 407 G~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 407 GVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CcCcccCCCcCcHHHHHHhcccceee
Confidence 99999999999999999999999875
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-83 Score=652.85 Aligned_cols=421 Identities=39% Similarity=0.634 Sum_probs=390.3
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.+.+++++++ .|+.++.++|.++|+++++.|.+++++|++++++|+|||..++ ..|+..+++.++++++.+
T Consensus 18 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~ 96 (453)
T cd07149 18 ASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA-RKEVDRAIETLRLSAEEA 96 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4556666555 4667899999999999999999999999999999999999975 569999999999988877
Q ss_pred hhhcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc
Q 013526 77 DKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151 (441)
Q Consensus 77 ~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a 151 (441)
....+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~a 176 (453)
T cd07149 97 KRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEA 176 (453)
T ss_pred HHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 66544433321 1234578899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|+++++++++.+.+..|+.||++|.|.||||+++++.|.+.++ .+++++|+|||||+||++|+|++.|++.++
T Consensus 177 g~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~ 253 (453)
T cd07149 177 GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEKAVERCV 253 (453)
T ss_pred CcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCCceEEECCCCCHHHHHHHHH
Confidence 99999999999976677899999999999999999999999998853 689999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|+++||.|++++++|||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||
T Consensus 254 ~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 333 (453)
T cd07149 254 SGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGG 333 (453)
T ss_pred HHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. .|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|++++||++||||+|.+++.++++++++|+|
T Consensus 334 ~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v 410 (453)
T cd07149 334 KR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGV 410 (453)
T ss_pred CC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeE
Confidence 75 588999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||+.... .+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 411 ~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 411 MINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred EECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99998763 467999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-82 Score=650.91 Aligned_cols=425 Identities=34% Similarity=0.494 Sum_probs=394.7
Q ss_pred CCCHHHHHHHHH--------hcCC-CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT--------VHGH-VFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|++ |... +.++|.++|+++++.|.+++++|++++++|+|||..++ ..|+..+++.++++++
T Consensus 34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~ 112 (473)
T cd07082 34 ALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIE 112 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHH
Confidence 346667766653 4456 99999999999999999999999999999999999974 5699999999999998
Q ss_pred hhhhhcCceeccc-----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 75 ~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
..+++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~ 192 (473)
T cd07082 113 ELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFH 192 (473)
T ss_pred HHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 8877655433321 34556889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+++++++++.+.+.+..|..|+++|.|.||||+++++.|.+.++ .+|+++|+||+||+||++|+|++.|++.
T Consensus 193 ~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~ 269 (473)
T cd07082 193 DAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKE 269 (473)
T ss_pred HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHH
Confidence 9999999999999977778899999999999999999999999998864 7999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.++||.|+++++||||++++++|+++|.++++++++|+|.++++++||++++.+++++++++++++.+|+++++
T Consensus 270 i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~ 349 (473)
T cd07082 270 IVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLN 349 (473)
T ss_pred HHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||... .|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|
T Consensus 350 gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G 427 (473)
T cd07082 350 GGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVG 427 (473)
T ss_pred CCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcc
Confidence 99863 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||++... .+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 428 ~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 428 TVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred eEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 9999998764 35689999999999999999999999999998753
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-82 Score=668.48 Aligned_cols=413 Identities=24% Similarity=0.313 Sum_probs=373.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhc--------Cceecc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKM 86 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~ 86 (441)
.|+.++..+|.++|+++++.|++++++|++ +++|+|||+.+ +..|+..+++.+++++..+++.. +...+.
T Consensus 52 ~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~-a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~ 129 (663)
T TIGR02278 52 ALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRD-NWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPL 129 (663)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHH-HHHHHHHHHHHHHHHHHhhhhhccccccccCCceecc
Confidence 466789999999999999999999999999 59999999997 46799999999999999876521 333332
Q ss_pred c-c-ccccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEe
Q 013526 87 S-R-ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVP 162 (441)
Q Consensus 87 ~-~-~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~ 162 (441)
. . +...+..++|+ |||++|+|||||++..++++++||++||+||+|||+.+|+++.+|.+++.++| +|+|+||+++
T Consensus 130 ~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~ 209 (663)
T TIGR02278 130 SKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLIC 209 (663)
T ss_pred CCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEe
Confidence 1 1 22467899998 99999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHh-hcCCCceeeecCCCCceeecCCCC-----HHHHHHHHHHHHhh
Q 013526 163 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILF 236 (441)
Q Consensus 163 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----~~~aa~~i~~~~~~ 236 (441)
+.. ...+..++++|.|.||||+++|+.|.+.++ ...++|+++|+|||||+||++||| ++.|++.+++++|.
T Consensus 210 g~~---~~~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~ 286 (663)
T TIGR02278 210 GSA---GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTI 286 (663)
T ss_pred CCh---HHHHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHh
Confidence 842 233334477899999999999999998742 368899999999999999999999 99999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 316 (441)
|+||.|++++|||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++|+++|+++++||....
T Consensus 287 ~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~- 365 (663)
T TIGR02278 287 KAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL- 365 (663)
T ss_pred cCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred CCceeecEEEeeCCCCc-cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--cceEEEE
Q 013526 317 KGYYIEPTIFTNVTEDM-LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWI 393 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~v 393 (441)
+|+|++|||+.+++++| .++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++ ++|.|+|
T Consensus 366 ~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~I 445 (663)
T TIGR02278 366 DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHI 445 (663)
T ss_pred CCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEE
Confidence 68999999999998876 79999999999999999999999999999999999999999999999999999 7999999
Q ss_pred -cCc-------CC-CCCCCCccCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 013526 394 -NCY-------FA-FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 433 (441)
Q Consensus 394 -N~~-------~~-~~~~~p~GG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 433 (441)
|+. .. ..+.+||||+|+||+|++ +|.+++++||+.|++..
T Consensus 446 nN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 446 LNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 641 11 235789999999999998 46899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-82 Score=642.32 Aligned_cols=410 Identities=26% Similarity=0.390 Sum_probs=376.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceec-c---cccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M---SRAL 90 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~---~~~~ 90 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++.+.+....... . ..+.
T Consensus 13 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (443)
T cd07132 13 SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLD 92 (443)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCC
Confidence 58899999999999999999999999999999999999999765679999999999998877665332111 1 1234
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~ 170 (441)
..++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++ +...
T Consensus 93 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~-~~~~ 170 (443)
T cd07132 93 DVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGV-EETT 170 (443)
T ss_pred ceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCH-HHHH
Confidence 5788999999999999999999999999999999999999999999999999999999986 9999999999944 4455
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 250 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V 250 (441)
.++. +++|.|.||||+.+++.|.+.++ .+++|+++|+||+||+||++|||++.|++.|++++|+++||.|+++++|||
T Consensus 171 ~l~~-~~vd~V~fTGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V 248 (443)
T cd07132 171 ELLK-QRFDYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLC 248 (443)
T ss_pred HHHh-CCCCEEEEECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEE
Confidence 6665 48999999999999999999887 789999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCC
Q 013526 251 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 330 (441)
Q Consensus 251 ~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 330 (441)
|++++++|+++|++.+++++.|+| ++++++||++++.+++++++++++ +++++||... .+++|++|||+.+++
T Consensus 249 ~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~ 321 (443)
T cd07132 249 TPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVK 321 (443)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCC
Confidence 999999999999999999998888 688999999999999999999874 4899999764 368999999999999
Q ss_pred CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCC--CCCCCccCC
Q 013526 331 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGY 408 (441)
Q Consensus 331 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~p~GG~ 408 (441)
++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++... .+.+||||+
T Consensus 322 ~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~ 401 (443)
T cd07132 322 PSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGV 401 (443)
T ss_pred CCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999988653 367999999
Q ss_pred CCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 409 KMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 409 ~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+||+|+++|.+++++|++.|++++++
T Consensus 402 k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 402 GNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CcccCCCcccHHHHHHhccccEEEEcc
Confidence 999999999999999999999998775
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-82 Score=647.27 Aligned_cols=411 Identities=30% Similarity=0.435 Sum_probs=378.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 70 ~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~ 148 (500)
T TIGR01238 70 HANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQ 148 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 34566777766 3567899999999999999999999999999999999999974 56999999999999987
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+...+ ...++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+
T Consensus 149 ~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~ 217 (500)
T TIGR01238 149 VRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPA 217 (500)
T ss_pred HHHhcC-----------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCC
Confidence 654321 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC---CceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL---KPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~---~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
|+||++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ .+. +|+++|+|||||+||++|+|++.|++.+++
T Consensus 218 gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa-~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~ 296 (500)
T TIGR01238 218 GTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA-QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLR 296 (500)
T ss_pred CceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh-hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHH
Confidence 9999999876678999999999999999999999999999988 444 799999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++..|++++.++.
T Consensus 297 ~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~ 376 (500)
T TIGR01238 297 SAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTL 376 (500)
T ss_pred HHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998874432
Q ss_pred ---cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 313 ---PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 313 ---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
.....|+|++|||+.+ ++|.++++|+||||++|++|+ +++|||+++|+++|||+++|||+|.+.+++++++++
T Consensus 377 ~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~ 454 (500)
T TIGR01238 377 DDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHAR 454 (500)
T ss_pred CCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCC
Confidence 1223689999999973 688899999999999999998 799999999999999999999999999999999999
Q ss_pred ceEEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhcc
Q 013526 388 AGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVK 429 (441)
Q Consensus 388 ~g~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k 429 (441)
+|+|+||+.... .+.+||||+|+||+| .++|.+++++|++.|
T Consensus 455 ~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 455 VGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred cceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 999999997653 356899999999999 799999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=647.85 Aligned_cols=414 Identities=23% Similarity=0.343 Sum_probs=370.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceeccc-------
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------- 87 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------- 87 (441)
.|+.+++.+|.++|+++++.|++++++|++++++|+|||+.+ +..|+..+++.+++++.++....+......
T Consensus 56 ~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~-a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~ 134 (521)
T PRK11903 56 ALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRND-SAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLG 134 (521)
T ss_pred hhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCcccccc
Confidence 466789999999999999999999999999999999999997 467999999999999998766543211110
Q ss_pred --cccccceeecc-cceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEeC
Q 013526 88 --RALQGYTLREP-IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPG 163 (441)
Q Consensus 88 --~~~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~~ 163 (441)
........++| +|||++|+|||||++..++++++||++||+||+|||+.+|.++..|.+++.++| +|+|+++++++
T Consensus 135 ~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g 214 (521)
T PRK11903 135 KDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG 214 (521)
T ss_pred ccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeC
Confidence 12234667899 699999999999999999999999999999999999999999999999999999 99999999998
Q ss_pred CchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHh-hcCCCceeeecCCCCceeecCCCC-----HHHHHHHHHHHHhhc
Q 013526 164 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFN 237 (441)
Q Consensus 164 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----~~~aa~~i~~~~~~~ 237 (441)
.+.++...| +++|.|.||||+++|+.|.+.++ ...++|+++|+|||||+||++|+| ++.+++.+++++|.|
T Consensus 215 ~~~~~~~~l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~ 291 (521)
T PRK11903 215 SSAGLLDHL---QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVK 291 (521)
T ss_pred CchHHHhcc---cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhc
Confidence 655544333 78999999999999999998642 367899999999999999999999 599999999999999
Q ss_pred cCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC---
Q 013526 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--- 314 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--- 314 (441)
+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++.++|+.. .+|+++++||...
T Consensus 292 sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~ 370 (521)
T PRK11903 292 SGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALV 370 (521)
T ss_pred cCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999964 5799999999652
Q ss_pred ---CCCCceeecEEEeeCCC--CccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--c
Q 013526 315 ---GKKGYYIEPTIFTNVTE--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--R 387 (441)
Q Consensus 315 ---~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~ 387 (441)
.+.|+|++|||+.++++ ++.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++ +
T Consensus 371 ~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~ 450 (521)
T PRK11903 371 DADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADS 450 (521)
T ss_pred CCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHh
Confidence 13588999999987654 4789999999999999999999999999999999999999999999999999999 8
Q ss_pred ceEEEEcCcCC---------CCCCCCccCCCCCCCCCcc-hHHHHHhhhhccEEEE
Q 013526 388 AGIIWINCYFA---------FDSDCPYGGYKMSGFGRDC-GLESLHNYLQVKSVVT 433 (441)
Q Consensus 388 ~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~-g~~~l~~~t~~k~v~~ 433 (441)
+|+|+||+... ..+.+||||+|.||+|+++ |.+++++||+.|++..
T Consensus 451 ~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 451 HGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 99999998542 3457899999999999985 5899999999887754
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-81 Score=682.55 Aligned_cols=428 Identities=30% Similarity=0.449 Sum_probs=396.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|+.+++.|+|||+.+ +..|+..++++++|++..
T Consensus 581 ~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~-a~~EV~eaid~lr~ya~~ 659 (1038)
T PRK11904 581 FADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQD-AIAEVREAVDFCRYYAAQ 659 (1038)
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 466778877775 66789999999999999999999999999999999999997 467999999999999998
Q ss_pred hhhhcCc--eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGE--VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.+..+. .++.+.+..++..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+
T Consensus 660 a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGl 739 (1038)
T PRK11904 660 ARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGI 739 (1038)
T ss_pred HHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCc
Confidence 8776543 34445678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|++|++++++.+.+..|+.||+++.|.||||+++++.|.+.++.. ..+|+++|+||+||+||++|||++.|++.++
T Consensus 740 P~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv 819 (1038)
T PRK11904 740 PKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVV 819 (1038)
T ss_pred CcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHH
Confidence 99999999998877899999999999999999999999999988733 2679999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+|+|.++||.|++++++|||++++++|+++|++.++++++|+|.|+++++||++++.+++++.++|+++++ |+++++||
T Consensus 820 ~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg 898 (1038)
T PRK11904 820 TSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQL 898 (1038)
T ss_pred HHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877 88999999
Q ss_pred CcCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 312 KPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 312 ~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
..++ ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.+++++++++
T Consensus 899 ~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~ 976 (1038)
T PRK11904 899 PLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVR 976 (1038)
T ss_pred CCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCC
Confidence 7653 2599999999963 577889999999999999998 699999999999999999999999999999999999
Q ss_pred ceEEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 388 AGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 388 ~g~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|.|+||+..+. .+.+||||.|.||+| ..+|++++++|++.|+|++++
T Consensus 977 aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 977 VGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred EEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 999999998763 356899999999999 588999999999999998875
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-80 Score=630.09 Aligned_cols=407 Identities=29% Similarity=0.466 Sum_probs=375.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-eecc---cccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRAL 90 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~ 90 (441)
.|+.+++.+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++......+. .... ..+.
T Consensus 13 ~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (426)
T cd07087 13 TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPA 92 (426)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCC
Confidence 58999999999999999999999999999999999999987665669999999999998877654322 1111 1234
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~ 170 (441)
..+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.++++++.+ |+|+|+++++++ +.+.+.
T Consensus 93 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g-~~~~~~ 170 (426)
T cd07087 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEG-GVEVAT 170 (426)
T ss_pred ceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeC-CchHHH
Confidence 678899999999999999999999999999999999999999999999999999999999 699999999998 446688
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 250 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V 250 (441)
.|+.|+ ++.|.||||+++++.|.+.++ .+++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++|||
T Consensus 171 ~l~~~~-v~~V~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V 248 (426)
T cd07087 171 ALLAEP-FDHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLV 248 (426)
T ss_pred HHHhCC-CCEEEEeCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEE
Confidence 899998 999999999999999999887 788999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCC
Q 013526 251 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 330 (441)
Q Consensus 251 ~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 330 (441)
|++++++|+++|++.+++++.|+|. +.+++||++++.+.+++.++++++ ++++||... ..|+|++|||+.+++
T Consensus 249 ~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~ 321 (426)
T cd07087 249 HESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVS 321 (426)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCC
Confidence 9999999999999999999866664 688999999999999999999865 799999764 368999999999999
Q ss_pred CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCCCCCccCC
Q 013526 331 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGY 408 (441)
Q Consensus 331 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~p~GG~ 408 (441)
++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+.+. ..+.+||||+
T Consensus 322 ~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~ 401 (426)
T cd07087 322 PDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGV 401 (426)
T ss_pred CCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999865 4478999999
Q ss_pred CCCCCCCcchHHHHHhhhhccEEE
Q 013526 409 KMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 409 ~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
|.||+|+++|.+++++||+.|+++
T Consensus 402 k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 402 GNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccCCCccCHHHHHHhccceeec
Confidence 999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=659.81 Aligned_cols=413 Identities=25% Similarity=0.350 Sum_probs=371.3
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhc--------Cceecc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKM 86 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~ 86 (441)
.|+.+++.+|.++|+++++.|++++++|++ ++.|+|||..++ ..|+..+++.+++++..+++.. +...+.
T Consensus 56 ~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~ 133 (675)
T PRK11563 56 ALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDS-WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPL 133 (675)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccCCccccc
Confidence 477889999999999999999999999998 599999999974 5699999999999998875432 222222
Q ss_pred c-cc-cccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEe
Q 013526 87 S-RA-LQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVP 162 (441)
Q Consensus 87 ~-~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~ 162 (441)
. .+ ...+..++|+ |||++|+|||||++..++++++||++||+||+|||+.+|+++..|.+++.++| +|+|++|+++
T Consensus 134 ~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~ 213 (675)
T PRK11563 134 SKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLIC 213 (675)
T ss_pred cCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEee
Confidence 1 12 2246788997 99999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHH-hhcCCCceeeecCCCCceeecCCCC-----HHHHHHHHHHHHhh
Q 013526 163 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILF 236 (441)
Q Consensus 163 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~-a~~~~~~~~~e~gg~~~~iV~~dad-----~~~aa~~i~~~~~~ 236 (441)
+.. ...+..++.++.|.||||+++|+.|.+.+ +..+++|+++|+|||||+||++||| ++.|++.+++++|.
T Consensus 214 g~~---~~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~ 290 (675)
T PRK11563 214 GSA---GDLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTV 290 (675)
T ss_pred CCH---HHHhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHH
Confidence 842 23344456799999999999999999853 2378899999999999999999995 99999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC--
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-- 314 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-- 314 (441)
|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.+++++.++|++|+++ +++++||...
T Consensus 291 ~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~ 369 (675)
T PRK11563 291 KAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFE 369 (675)
T ss_pred hCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999632
Q ss_pred -----CCCCceeecEEEeeCCC--CccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc
Q 013526 315 -----GKKGYYIEPTIFTNVTE--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387 (441)
Q Consensus 315 -----~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 387 (441)
...|+|++|||+.++++ ++.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.+++++++
T Consensus 370 ~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~ 449 (675)
T PRK11563 370 VVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAA 449 (675)
T ss_pred ccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHH
Confidence 13689999999999988 57999999999999999999999999999999999999999999999999999997
Q ss_pred --ceEEEEcCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 013526 388 --AGIIWINCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 433 (441)
Q Consensus 388 --~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 433 (441)
+|.|+||+.+. ..+.+||||+|.||+|++ +|.+++++|++.|++..
T Consensus 450 ~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 450 PWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred hcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 99999998532 126789999999999998 46999999999999765
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-79 Score=669.54 Aligned_cols=412 Identities=29% Similarity=0.447 Sum_probs=382.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++..+|.++|+++++.|++++++|+.+++.|+|||+.+ +..|+..++++++||+..
T Consensus 678 ~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~-A~~EV~eaidflryyA~~ 756 (1318)
T PRK11809 678 EATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSN-AIAEVREAVDFLRYYAGQ 756 (1318)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 467788888886 77899999999999999999999999999999999999996 567999999999999987
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++... ....++|+|||++|+|||||+...+.++++||++||+||+|||+.+|+++..+++++.++|+|+
T Consensus 757 a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~ 825 (1318)
T PRK11809 757 VRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPA 825 (1318)
T ss_pred HHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCc
Confidence 65321 1246899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC------CceeeecCCCCceeecCCCCHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~------~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
|++|+++|.+.+.+..|+.||+++.|+||||+++++.|.+.++ .++ +|+++|+||+|++||++|||++.+++.
T Consensus 826 gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA-~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~ 904 (1318)
T PRK11809 826 GVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLA-GRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVAD 904 (1318)
T ss_pred CeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHh-hhcccccCceeEEEecCCccceEECCCCCHHHHHHH
Confidence 9999999988888999999999999999999999999999887 333 799999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++|+|.++||.|++++++|||++++|+|+++|++.++++++|+|.+.++++||++++.++++++++|++++.+|++++.
T Consensus 905 iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~ 984 (1318)
T PRK11809 905 VLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984 (1318)
T ss_pred HHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcCC---CCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH
Q 013526 310 GGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384 (441)
Q Consensus 310 gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 384 (441)
|+.... +.|+|+.|||+.. +++..+++|+||||+.|++|+ +++|+|+++|+++|||+++|||+|.+.++++++
T Consensus 985 g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~ 1062 (1318)
T PRK11809 985 AARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTG 1062 (1318)
T ss_pred cCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHH
Confidence 875432 4699999999974 567889999999999999996 799999999999999999999999999999999
Q ss_pred hccceEEEEcCcCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhccE
Q 013526 385 SIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKS 430 (441)
Q Consensus 385 ~l~~g~v~vN~~~~~--~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~ 430 (441)
++++|.|+||+.... .+.+||||.|.||+|. .+|++++.+|+..+.
T Consensus 1063 ~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1063 SAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred hCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 999999999987663 3568999999999994 899999999999874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-78 Score=663.83 Aligned_cols=417 Identities=30% Similarity=0.461 Sum_probs=386.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|+.+++.|+||++.+ +..|+..++++++|++..
T Consensus 586 ~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~e-a~~Ev~eaid~lr~ya~~ 664 (1208)
T PRK11905 586 EASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLAN-AIAEVREAVDFLRYYAAQ 664 (1208)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 466778888775 66789999999999999999999999999999999999997 567999999999999987
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++...+ ...++|+|||++|+|||||+...+.++++||++||+||+|||+.+|+++..+++++.++|+|+
T Consensus 665 a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~ 733 (1208)
T PRK11905 665 ARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPK 733 (1208)
T ss_pred HHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCc
Confidence 765421 245789999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|++|++++++.+.+..|+.||+++.|.||||+++++.|.+.++.. ..+|+++|+||+||+||++|||++.|++.+++|
T Consensus 734 gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~s 813 (1208)
T PRK11905 734 DALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIAS 813 (1208)
T ss_pred ccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHH
Confidence 999999998877899999999999999999999999999998732 258999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.++||.|++++++|||++++++|+++|+++++++++|+|.+.++++||++++.+++++.++|++++++|+.++.|+..
T Consensus 814 aF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~ 893 (1208)
T PRK11905 814 AFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLP 893 (1208)
T ss_pred HHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877643
Q ss_pred CC-CCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 314 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 314 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
.. +.|+|+.|||+. + +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.++++++++++|.
T Consensus 894 ~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGn 971 (1208)
T PRK11905 894 AETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGN 971 (1208)
T ss_pred CCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeE
Confidence 22 469999999996 3 578899999999999999997 699999999999999999999999999999999999999
Q ss_pred EEEcCcCCCC--CCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEe
Q 013526 391 IWINCYFAFD--SDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 391 v~vN~~~~~~--~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 434 (441)
|+||+..+.. +.+||||.|.||+|. .+|++++++|++.|+++++
T Consensus 972 vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 972 IYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred EEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 9999987643 568999999999995 9999999999999998765
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-78 Score=611.95 Aligned_cols=404 Identities=22% Similarity=0.275 Sum_probs=361.1
Q ss_pred CCCHHHHHHHHHhc----------CCCHHHH----HHHHHHHHHHHHHh--HHHHHHHHHHHcCCChhhhhhccHHHHHH
Q 013526 4 LPSRQHVRRLITVH----------GHVFLEP----RGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAAN 67 (441)
Q Consensus 4 ~~~~~~~~~a~~~~----------~~~~~~R----~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~ 67 (441)
.++.+++++|++.+ ..+..+| .++|+++++.|+++ .++|++++++|+|||+.+ +..|+..+++
T Consensus 30 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~-a~~Ev~~~~~ 108 (489)
T cd07126 30 DTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQ-ALGEVVVTRK 108 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHH-HHHHHHHHHH
Confidence 46778888888554 2457899 89999999999999 499999999999999996 5679999999
Q ss_pred HHHHHHHhhhhhcCcee--cc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 68 TLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 68 ~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
.++++++...+..+... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|
T Consensus 109 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l 188 (489)
T cd07126 109 FLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQF 188 (489)
T ss_pred HHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHH
Confidence 99999988766554432 21 1245678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC-CH
Q 013526 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DV 223 (441)
Q Consensus 145 ~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da-d~ 223 (441)
.+++.++|+|+|++|++++.+.+ ...++.|++++.|.||||+++|+.|...++ +++.+|+||+||+||++|+ |+
T Consensus 189 ~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dl 263 (489)
T cd07126 189 LRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDVSDV 263 (489)
T ss_pred HHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCcccH
Confidence 99999999999999999986554 556888999999999999999999988765 5789999999999999999 99
Q ss_pred HHHHHHHHHHHhhccCCCcccCceEEEeCcc-HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Q 013526 224 NTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 302 (441)
Q Consensus 224 ~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 302 (441)
+.|++.+++++|.|+||.|++++|+|||+++ +++|+++|++.++++++|+ +++||+++.. .+++.++++++++
T Consensus 264 d~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~ 337 (489)
T cd07126 264 DYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLA 337 (489)
T ss_pred HHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHh
Confidence 9999999999999999999999999999995 6899999999999998875 4789999998 9999999999998
Q ss_pred -cCCeEecCCCcCCC----CC-ceeecEEEee------CCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcE
Q 013526 303 -EGATLLTGGKPIGK----KG-YYIEPTIFTN------VTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLA 368 (441)
Q Consensus 303 -~ga~v~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~ 368 (441)
+|+++++||..... .+ .|++|||+.. ++++|.+++||+||||++|++|+| .+||++++|+++|||+
T Consensus 338 ~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~ 417 (489)
T cd07126 338 IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLT 417 (489)
T ss_pred CCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCce
Confidence 89999999976432 23 3899999952 567999999999999999999999 9999999999999999
Q ss_pred EEEecCCHHHHHHHHHhccceE--EEEcCcCCCCCC----CCccCCCCCCCCCcchH
Q 013526 369 AGIMTKDLNVANTVSRSIRAGI--IWINCYFAFDSD----CPYGGYKMSGFGRDCGL 419 (441)
Q Consensus 369 ~~v~s~d~~~~~~~~~~l~~g~--v~vN~~~~~~~~----~p~GG~~~SG~g~~~g~ 419 (441)
+||||+|.++++++++++++|. |+||+.++..+. .||||.|+||.|+.+..
T Consensus 418 ~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~ 474 (489)
T cd07126 418 AAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 474 (489)
T ss_pred EEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHH
Confidence 9999999999999999999999 669988775444 99999999999987643
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-77 Score=609.33 Aligned_cols=417 Identities=50% Similarity=0.812 Sum_probs=393.4
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCce-ecccccccc
Q 013526 14 ITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQG 92 (441)
Q Consensus 14 ~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~ 92 (441)
..|+.++.++|.++|+++++.|.+++++|+++++.|+||+..+ ...|+..+++.+++++...+++.+.. .+...+...
T Consensus 12 ~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~-~~~ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 90 (432)
T cd07078 12 KAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEE-ALGEVARAADTFRYYAGLARRLHGEVIPSPDPGELA 90 (432)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceE
Confidence 3788999999999999999999999999999999999998885 67799999999999888777654432 222356678
Q ss_pred ceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHH
Q 013526 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 172 (441)
Q Consensus 93 ~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l 172 (441)
+.+++|+||+++++|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+....|
T Consensus 91 ~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l 170 (432)
T cd07078 91 IVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAAL 170 (432)
T ss_pred EEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998666688999
Q ss_pred HhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeC
Q 013526 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252 (441)
Q Consensus 173 ~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~ 252 (441)
..|+++|.|.||||..+++.|.+.++ ++++|+++|+||++++||++|+|++.+++.|++++|.++||.|+++++||||+
T Consensus 171 ~~~~~i~~v~ftGs~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~ 249 (432)
T cd07078 171 ASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHE 249 (432)
T ss_pred hcCCCCCEEEEECcHHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcH
Confidence 99999999999999999999999988 77899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC-CCceeecEEEeeCCC
Q 013526 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTE 331 (441)
Q Consensus 253 ~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~ 331 (441)
+++++|+++|+++++++++|+|.|+++++||++++.+++++.++++++.++|+++++||..... .|+|++|||+.++++
T Consensus 250 ~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~ 329 (432)
T cd07078 250 SIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDP 329 (432)
T ss_pred HHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999999999999976542 589999999999999
Q ss_pred CccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCC-CCCCCccCCCC
Q 013526 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKM 410 (441)
Q Consensus 332 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~p~GG~~~ 410 (441)
+++++++|+||||++|++|++++|||+++|+.++||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||.|.
T Consensus 330 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~ 409 (432)
T cd07078 330 DMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQ 409 (432)
T ss_pred CChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999886 88999999999
Q ss_pred CCCCCcchHHHHHhhhhccEEE
Q 013526 411 SGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 411 SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+|.++|++++++||+.|+++
T Consensus 410 sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 410 SGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CcCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-78 Score=565.97 Aligned_cols=407 Identities=26% Similarity=0.403 Sum_probs=372.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcC-ceecc---ccccccc
Q 013526 18 GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKM---SRALQGY 93 (441)
Q Consensus 18 ~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~---~~~~~~~ 93 (441)
..+.+-|.++|+++...+++|.++|.+++..|.+|+..++...|+...++.++++....+.+.. ...+- .--...+
T Consensus 20 tr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~ 99 (477)
T KOG2456|consen 20 TRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAY 99 (477)
T ss_pred cCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCcee
Confidence 5689999999999999999999999999999999999998888998888888877766554422 11111 1245678
Q ss_pred eeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH
Q 013526 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 173 (441)
Q Consensus 94 ~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~ 173 (441)
++.+|+|||++|+|||||+...+.++++||+|||+||+|||+.+|.++..|++++.+. ++.+++.++.|. .+....|.
T Consensus 100 I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Gg-v~ETt~LL 177 (477)
T KOG2456|consen 100 IEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGG-VPETTELL 177 (477)
T ss_pred EEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCC-CchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999994 44455666
Q ss_pred hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc
Q 013526 174 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 253 (441)
Q Consensus 174 ~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~ 253 (441)
.| +.|.|.||||+.+|+.++.+++ ++++||++|+|||+|++|++++|++-++++|+|+++.|+||.|.+|++|+++.+
T Consensus 178 ~~-rfD~IfyTGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~ 255 (477)
T KOG2456|consen 178 KQ-RFDHIFYTGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKS 255 (477)
T ss_pred Hh-hccEEEecCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHh
Confidence 66 7999999999999999999988 999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCc
Q 013526 254 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 254 ~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 333 (441)
++..++++++..++++. |....++.+++.+++..+++|+...+++- .+++.||..+. ...|+.|||+.|+++++
T Consensus 256 ~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~ 329 (477)
T KOG2456|consen 256 IQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SDRYIAPTILLDVPEDS 329 (477)
T ss_pred hhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hhcccCCeEEecCCCCC
Confidence 99999999999999975 55556889999999999999998888653 58999999764 66799999999999999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCCCCCccCCCCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMS 411 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~p~GG~~~S 411 (441)
++|+||+||||++|+.|+|++|+|+++|..+..|++|+||+|.+..+++.+++.+|.|.+|+..+ ....+||||.|.|
T Consensus 330 p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~S 409 (477)
T KOG2456|consen 330 PVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGES 409 (477)
T ss_pred hhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999866 4578999999999
Q ss_pred CCCCcchHHHHHhhhhccEEEEe
Q 013526 412 GFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 412 G~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|+|++||.++++.|++.|+|..+
T Consensus 410 GmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 410 GMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred ccccccccccccccccchhhhhc
Confidence 99999999999999999998765
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-76 Score=600.92 Aligned_cols=403 Identities=23% Similarity=0.303 Sum_probs=361.8
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhc--Cceecc------
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--GEVLKM------ 86 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--~~~~~~------ 86 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+|||..+ ...|+..+++.+++++..++... +.....
T Consensus 14 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~-~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~ 92 (454)
T cd07129 14 SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEAR-LQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQ 92 (454)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccC
Confidence 688999999999999999999999999999999999999986 56799999999999988765422 221111
Q ss_pred -ccccccceeecccceEEEECCCccchHh--hHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCCcEE
Q 013526 87 -SRALQGYTLREPIGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLN 159 (441)
Q Consensus 87 -~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~~v~ 159 (441)
..+...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|+||
T Consensus 93 ~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~ 172 (454)
T cd07129 93 PLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFS 172 (454)
T ss_pred CCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheE
Confidence 1123457889999999999999999987 4589999999999999999999999999988776 48999999999
Q ss_pred EEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc-CCCceeeecCCCCceeecCCC---CHHHHHHHHHHHHh
Q 013526 160 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSLELGGKSPLLIFDDV---DVNTAADMALLGIL 235 (441)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~-~~~~~~~e~gg~~~~iV~~da---d~~~aa~~i~~~~~ 235 (441)
++++++.+.+..|+.|+.++.|.||||+.+++.|.+.++.+ .++|+++|+||+||+||++|+ |++.|++.+++++|
T Consensus 173 ~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~ 252 (454)
T cd07129 173 LLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLT 252 (454)
T ss_pred EeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHh
Confidence 99997767899999999999999999999999999988732 689999999999999999999 89999999999999
Q ss_pred hccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc-CCeEecCCCc
Q 013526 236 FNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKP 313 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~ 313 (441)
.|+||.|+++++||||++ ++|+|+++|+++++++++| |++++...++..+.+++++++ |+++++||..
T Consensus 253 ~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~ 322 (454)
T cd07129 253 LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAAAPGVRVLAGGAA 322 (454)
T ss_pred cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHhcCCcEEEeCCCc
Confidence 999999999999999999 9999999999999988654 667777778888889999998 9999999976
Q ss_pred CCCCCceeecEEEeeCC---CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC--HHHHHHHHHhc--
Q 013526 314 IGKKGYYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD--LNVANTVSRSI-- 386 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d--~~~~~~~~~~l-- 386 (441)
. .+|+|++|||+...+ ++|+++++|+||||++|++|+|.+|+|+++|.+++||++||||+| .+.+++++.++
T Consensus 323 ~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~ 401 (454)
T cd07129 323 A-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLER 401 (454)
T ss_pred C-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHh
Confidence 4 378999999998655 689999999999999999999999999999999999999999999 79999999999
Q ss_pred cceEEEEcCcCCCC---CCCCccC-CCCCCCCCc--chHHHHHhhhhcc
Q 013526 387 RAGIIWINCYFAFD---SDCPYGG-YKMSGFGRD--CGLESLHNYLQVK 429 (441)
Q Consensus 387 ~~g~v~vN~~~~~~---~~~p~GG-~~~SG~g~~--~g~~~l~~~t~~k 429 (441)
++|+|+||+++... +.+|||| +|.||.|++ +|.+++++||++-
T Consensus 402 ~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 402 KAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred hCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 69999999876532 4899999 999999998 7999999999973
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-76 Score=596.93 Aligned_cols=402 Identities=22% Similarity=0.255 Sum_probs=362.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhc--Cce---eccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--GEV---LKMSRA 89 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--~~~---~~~~~~ 89 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+|||. +. ..|+..+++.+++++..+.... +.. .+...+
T Consensus 14 ~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (442)
T cd07084 14 AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLK 91 (442)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhccccccccccCCCCcc
Confidence 6999999999999999999999999999999999999999 44 5699999999999988875431 111 111123
Q ss_pred cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC-CCCcEEEEeCCchhH
Q 013526 90 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTA 168 (441)
Q Consensus 90 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl-P~~~v~~~~~~~~~~ 168 (441)
...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+ |+++++++++++. .
T Consensus 92 ~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~ 170 (442)
T cd07084 92 QQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-T 170 (442)
T ss_pred ccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-H
Confidence 4678899999999999999999999999999999999999999999999999999999999998 9999999999665 8
Q ss_pred HHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC-CHHHHHHHHHHHHhhccCCCcccCce
Q 013526 169 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSR 247 (441)
Q Consensus 169 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da-d~~~aa~~i~~~~~~~~Gq~C~~~~~ 247 (441)
+..|+.||+++.|.||||+++++.|.+.++ . +|+++|+||+||+||++|| |++.+++.+++++|.|+||.|+++++
T Consensus 171 ~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~r 247 (442)
T cd07084 171 MQALLLHPNPKMVLFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSM 247 (442)
T ss_pred HHHHHcCCCCCEEEEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcE
Confidence 899999999999999999999999999875 3 8999999999999999999 69999999999999999999999999
Q ss_pred EEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc-CCeEecCCCcCC------CCCc
Q 013526 248 VYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIG------KKGY 319 (441)
Q Consensus 248 v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~------~~g~ 319 (441)
+|||++ ++++|+++|.+.++++++| ++.+||++++ ++.++++++.++ |+++++||.... ..|+
T Consensus 248 l~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~ 318 (442)
T cd07084 248 LFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGA 318 (442)
T ss_pred EEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCc
Confidence 999999 9999999999999999998 5789998765 456667777788 489999997532 2589
Q ss_pred eeecEEEeeCCCCc---cccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc-cceEEEE
Q 013526 320 YIEPTIFTNVTEDM---LIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWI 393 (441)
Q Consensus 320 ~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~v 393 (441)
|++|||+.+++++| +++++|+||||++|++|+| .+|+++++|+++|||++||||+|.+.++++++++ ++|+|+|
T Consensus 319 ~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~i 398 (442)
T cd07084 319 CVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYA 398 (442)
T ss_pred ccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEE
Confidence 99999999999987 9999999999999999999 9999999999999999999999999999999999 9999999
Q ss_pred cCc-CC-CCCCCCccC-CCCCCCCCcc-hHHHHHhhhhccEE
Q 013526 394 NCY-FA-FDSDCPYGG-YKMSGFGRDC-GLESLHNYLQVKSV 431 (441)
Q Consensus 394 N~~-~~-~~~~~p~GG-~~~SG~g~~~-g~~~l~~~t~~k~v 431 (441)
|+. +. ..+..|||| .|.||+|+.. |.+++++||+.+.+
T Consensus 399 N~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 399 ILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred CCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 977 33 445677866 8899999886 99999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-75 Score=541.15 Aligned_cols=419 Identities=30% Similarity=0.524 Sum_probs=388.9
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhh-cCceeccc---cc
Q 013526 14 ITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVLKMS---RA 89 (441)
Q Consensus 14 ~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~-~~~~~~~~---~~ 89 (441)
.+|+..++..|.+.|+.+.+++-+|.|.+++..++||||++.+++.+||.-+++.+.+.....++. .+...|.. .-
T Consensus 100 ktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~y 179 (583)
T KOG2454|consen 100 KTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLY 179 (583)
T ss_pred hhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheee
Confidence 368889999999999999999999999999999999999999999999999999999887665442 23322221 23
Q ss_pred cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHH----HHHHcCCCCCcEEEEeCCc
Q 013526 90 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH----LAKLAGVPDGVLNVVPGFG 165 (441)
Q Consensus 90 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~----~l~~aglP~~~v~~~~~~~ 165 (441)
...++.++|+||+..|.|||||+.+.+.+++.||.+||++|+|-|+.+.++.....+ +|+..|-|++++|++++ =
T Consensus 180 Kg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-l 258 (583)
T KOG2454|consen 180 KGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-L 258 (583)
T ss_pred ccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-C
Confidence 557899999999999999999999999999999999999999999998877665544 45667999999999999 4
Q ss_pred hhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccC
Q 013526 166 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 245 (441)
Q Consensus 166 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~ 245 (441)
++.++.|.+|++++.+.|.||..+++.|++.++ +.++|+.+|+|||+++|+++|+|++..+.-++++.|..+||.|.+.
T Consensus 259 pd~a~~ltSh~g~khitFiGSqpvak~i~~~AA-k~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGi 337 (583)
T KOG2454|consen 259 PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA-KTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGI 337 (583)
T ss_pred cchHhHhhcCCCcceEEEecCcHHHHHHHHhhh-hhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccce
Confidence 578999999999999999999999999999988 8999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC----CCCcee
Q 013526 246 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYI 321 (441)
Q Consensus 246 ~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~ 321 (441)
+|++||.++|+.|+..|.++++.++.|.|.-...|||.|++..+++.+++.+++|+.+||+++.||.+.. ..|.|+
T Consensus 338 ER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF 417 (583)
T KOG2454|consen 338 ERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYF 417 (583)
T ss_pred eEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998642 588999
Q ss_pred ecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC-CC
Q 013526 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FD 400 (441)
Q Consensus 322 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~ 400 (441)
+||++.+++++|++++||.||||++|+.+++.|++++++|.+++||.++||+.|..++++++++++.|.|.||+... +.
T Consensus 418 ~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~ 497 (583)
T KOG2454|consen 418 PPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYM 497 (583)
T ss_pred CCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987 45
Q ss_pred CCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 401 SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 401 ~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
..+||||.+.||+|++.|.+||+..+..|+|-+.
T Consensus 498 cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 498 CQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred eccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 7899999999999999999999999999998554
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-74 Score=579.94 Aligned_cols=382 Identities=19% Similarity=0.244 Sum_probs=332.5
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCce-e-cc---ccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-L-KM---SRA 89 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~-~~---~~~ 89 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..++ .++.++++++... +.. + +. ..+
T Consensus 19 ~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~-------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 88 (429)
T cd07121 19 QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVED-------KIAKNHLAAEKTP---GTEDLTTTAWSGDN 88 (429)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-------HHHHHHHHHHhcC---cccccccccccCCC
Confidence 5778999999999999999999999999999999999999864 2344555544221 111 1 10 122
Q ss_pred cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCCcEEEEeCCc
Q 013526 90 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFG 165 (441)
Q Consensus 90 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~~v~~~~~~~ 165 (441)
...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|++++++
T Consensus 89 ~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~ 168 (429)
T cd07121 89 GLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPT 168 (429)
T ss_pred cceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCC
Confidence 34577889999999999999999999999999999999999999999999999998877 47899999999999876
Q ss_pred hhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccC
Q 013526 166 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 245 (441)
Q Consensus 166 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~ 245 (441)
.+.++.|+.||++|.|.||||+.+++.|.+. .+|+++|+|||+|+||++|||++.|++.|++++|+|+||.|+++
T Consensus 169 ~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~ 243 (429)
T cd07121 169 IETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAE 243 (429)
T ss_pred hHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCcc
Confidence 7788999999999999999999999999874 48999999999999999999999999999999999999999999
Q ss_pred ceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc--CCeEecCCCcC---CCCCce
Q 013526 246 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE--GATLLTGGKPI---GKKGYY 320 (441)
Q Consensus 246 ~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--ga~v~~gg~~~---~~~g~~ 320 (441)
+++|||+++||+|+++|++. . .+++++.+++++.++++++... |+++++||... ...|.|
T Consensus 244 ~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~ 308 (429)
T cd07121 244 KEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIE 308 (429)
T ss_pred ceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCC
Confidence 99999999999999999886 1 1478999999999999999864 68999988641 124777
Q ss_pred ee---cEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 321 IE---PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 321 ~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
+. |||+.+++++|+++++|+||||++|++|+|++|||+++|+++||| +++|||+|.+.++++++++++|+|+||+
T Consensus 309 ~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~ 388 (429)
T cd07121 309 VPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNG 388 (429)
T ss_pred CCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcC
Confidence 77 599999999999999999999999999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccCCCCCCC--CCcchHHHHHhhhhccEEE
Q 013526 396 YFAFDSDCPYGGYKMSGF--GRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~--g~~~g~~~l~~~t~~k~v~ 432 (441)
+.. +.+||||+|.|++ |..-| +|+ +..|+++
T Consensus 389 ~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~ 421 (429)
T cd07121 389 PSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT 421 (429)
T ss_pred CCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence 755 6789999999998 65444 444 4444443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=578.21 Aligned_cols=401 Identities=18% Similarity=0.229 Sum_probs=344.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh-c---cHHHHHHHHHHHHHhhhhhcCcee---ccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-G---DIPGAANTLRYYAGAADKIHGEVL---KMS 87 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~ 87 (441)
.|+.+++.+|.++|+++++.|++++++|+++++.|+|||..++.+ + ++.+.++.+++++....++.+... +..
T Consensus 99 ~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~ 178 (551)
T TIGR02288 99 GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQG 178 (551)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 588999999999999999999999999999999999999986422 1 778889999999888766655432 111
Q ss_pred -cc---cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHH----HHHHHHHHcCCCCCcEE
Q 013526 88 -RA---LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLN 159 (441)
Q Consensus 88 -~~---~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~----~l~~~l~~aglP~~~v~ 159 (441)
.+ ...+..++|+||+++|+|||||+++.++++++||++||+||+|||+.+|+++. .+.+++.++|+|+|+||
T Consensus 179 ~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~ 258 (551)
T TIGR02288 179 KNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVT 258 (551)
T ss_pred CCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEE
Confidence 11 12234789999999999999999999999999999999999999999998655 67799999999999999
Q ss_pred EEeCC-chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhcc
Q 013526 160 VVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 238 (441)
Q Consensus 160 ~~~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~ 238 (441)
++++. +.+.++.|+.||.++.|.||||+.+|+.|.+.++ .+++++|+|||||+||++|+|++.+++.+++++|.|+
T Consensus 259 lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~s 335 (551)
T TIGR02288 259 LAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYS 335 (551)
T ss_pred EecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 99984 6778999999999999999999999999998865 3799999999999999999999999999999999999
Q ss_pred CCCcccCceEEEeCc---------cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 239 GEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 239 Gq~C~~~~~v~V~~~---------~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
||.|++++|+|||++ +||+|+++|+++++++ +|+|.++.+++||++++.+++++ +++++.| ++++
T Consensus 336 GQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~ 409 (551)
T TIGR02288 336 GQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLL 409 (551)
T ss_pred CCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEE
Confidence 999999999999999 7999999999999999 99999999999999999999995 5667778 6666
Q ss_pred CCCcCC---CCC-ceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcC--CCC-cEEEEecCCHHHHHHH
Q 013526 310 GGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT--RYG-LAAGIMTKDLNVANTV 382 (441)
Q Consensus 310 gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~~v~s~d~~~~~~~ 382 (441)
||.... ..| +|++|||+....++|++++||+||||++|++|+|.+|||+++|++ +|| |+++|||+|.+.++++
T Consensus 410 gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~ 489 (551)
T TIGR02288 410 ASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAV 489 (551)
T ss_pred cCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHH
Confidence 665431 134 688999995444599999999999999999999999999999998 566 9999999999999999
Q ss_pred HHhc----------cceEEEEcCcCCCCCCCCccCCCCCCCCCcch-HHHHHhhhhccE
Q 013526 383 SRSI----------RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKS 430 (441)
Q Consensus 383 ~~~l----------~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g-~~~l~~~t~~k~ 430 (441)
.+++ ++|.|+||++ .||++.+.||.....| ..+-..|...|-
T Consensus 490 ~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n~~a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 490 QEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGNPAANASLSDGAFVANRF 542 (551)
T ss_pred HHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCCCccCCcccchhhhhcce
Confidence 9999 6777777764 4577778887765433 445555555543
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-73 Score=571.24 Aligned_cols=395 Identities=18% Similarity=0.206 Sum_probs=333.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHH--HHHHHHHhhhhhcCceecccccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAADKIHGEVLKMSRALQG 92 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (441)
.|+.+++.+|.++|+++++.|++|+++|+++++.|+|||..++. .++..... ..++++. ...+..++...+...
T Consensus 14 ~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 89 (439)
T cd07081 14 GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD---EKTCGVLTGDENGGT 89 (439)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---cccCceecCCCCCce
Confidence 68999999999999999999999999999999999999998753 34444433 2222221 122222332223456
Q ss_pred ceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhH
Q 013526 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTA 168 (441)
Q Consensus 93 ~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~aglP~~~v~~~~~~~~~~ 168 (441)
+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++|+|+|+||++++.+.+.
T Consensus 90 ~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~ 169 (439)
T cd07081 90 LIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIEL 169 (439)
T ss_pred EEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHH
Confidence 889999999999999999999999999999999999999999999999988888774 7799999999999877778
Q ss_pred HHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceE
Q 013526 169 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 248 (441)
Q Consensus 169 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v 248 (441)
++.|+.||+++.|.||||+++ .+.++ +.++|+++|+|||+|+||++|||++.|++.+++++|+++||.|++.+|+
T Consensus 170 g~~L~~~~~V~~V~FTGs~~v----~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv 244 (439)
T cd07081 170 AQRLMKFPGIGLLLATGGPAV----VKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSV 244 (439)
T ss_pred HHHHHcCCCCCEEEEECCHHH----HHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEE
Confidence 999999999999999999974 45555 6789999999999999999999999999999999999999999999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC--CCCCceeecE--
Q 013526 249 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGYYIEPT-- 324 (441)
Q Consensus 249 ~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~~~g~~~~Pt-- 324 (441)
|||+++||+|+++|.++. ||+++..++++++++|+++..+|++++.|+... ...|+|++||
T Consensus 245 ~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~ 309 (439)
T cd07081 245 IVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETR 309 (439)
T ss_pred EEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCce
Confidence 999999999999998863 799999999999999999999999775443211 1258899998
Q ss_pred -EEeeCC--CCccccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCC---HHHHHHHHHhccceEEEEc
Q 013526 325 -IFTNVT--EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKD---LNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 325 -vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d---~~~~~~~~~~l~~g~v~vN 394 (441)
++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++++|.|+||
T Consensus 310 ~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN 389 (439)
T cd07081 310 ILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKN 389 (439)
T ss_pred EEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEe
Confidence 998888 999999999999999999999999999999965 899999999999 9999999999999999999
Q ss_pred CcC-CC--CCCCCccCCCCC--CCCCcchHH-----HHHhhhhccEEEE
Q 013526 395 CYF-AF--DSDCPYGGYKMS--GFGRDCGLE-----SLHNYLQVKSVVT 433 (441)
Q Consensus 395 ~~~-~~--~~~~p~GG~~~S--G~g~~~g~~-----~l~~~t~~k~v~~ 433 (441)
+.. +. .-.--|||.+.+ |.|..+|.. +.++|++.|.|.+
T Consensus 390 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 390 GPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 876 31 123445565544 444444332 4677777777654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-73 Score=575.04 Aligned_cols=388 Identities=19% Similarity=0.231 Sum_probs=331.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhh---hcCceeccccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK---IHGEVLKMSRALQ 91 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ 91 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..++.. ..++++...... ....... ..+..
T Consensus 51 ~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 122 (465)
T PRK15398 51 RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKTPGVEDLTTEALT-GDNGL 122 (465)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHhccccccccCccc-CCCce
Confidence 456789999999999999999999999999999999999986431 233444333211 1111111 12345
Q ss_pred cceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCCcEEEEeCCchh
Q 013526 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPT 167 (441)
Q Consensus 92 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~aglP~~~v~~~~~~~~~ 167 (441)
.+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|+++++++.+.+
T Consensus 123 ~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~ 202 (465)
T PRK15398 123 TLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIE 202 (465)
T ss_pred eEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHH
Confidence 6788899999999999999999999999999999999999999999999999998876 689999999999986667
Q ss_pred HHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCce
Q 013526 168 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 247 (441)
Q Consensus 168 ~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~ 247 (441)
.+..|++||++|.|.||||+.+++.|.+ ..+|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++
T Consensus 203 ~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~r 277 (465)
T PRK15398 203 TAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKE 277 (465)
T ss_pred HHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCce
Confidence 8899999999999999999999999987 24899999999999999999999999999999999999999999999
Q ss_pred EEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC---CCCCcee---
Q 013526 248 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYI--- 321 (441)
Q Consensus 248 v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~--- 321 (441)
+|||+++||+|+++|+++. +|++++.+++++.++++++..++++++.||... ...|.++
T Consensus 278 vlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~ 342 (465)
T PRK15398 278 VIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKD 342 (465)
T ss_pred EEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCC
Confidence 9999999999999998861 278999999999999996554566777776431 1235555
Q ss_pred ecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHHHHhccceEEEEcCcCCC
Q 013526 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 399 (441)
Q Consensus 322 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~ 399 (441)
+|||+.+++++|+++++|+||||++|++|+|++|||+++|+++||| ++||||+|.+.++++++++++|+|+||++..
T Consensus 343 ~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~- 421 (465)
T PRK15398 343 TRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY- 421 (465)
T ss_pred CCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc-
Confidence 4799999999999999999999999999999999999999999988 9999999999999999999999999998753
Q ss_pred CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 400 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 400 ~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.+||||.|.|.+- .+|+.| ...|..|+++++
T Consensus 422 -~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 422 -AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred -cccCcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence 67899999999852 225555 666666665544
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-71 Score=566.10 Aligned_cols=409 Identities=16% Similarity=0.196 Sum_probs=354.5
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc----cHHHHHHHHHHHHHhhhhhcCceecc-ccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKM-SRA 89 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~ 89 (441)
.|+.+++.+|.++|.++++.|++++++|++++++|+||+..++.+. |++++++.++|+.+...++.+..... +.+
T Consensus 99 ~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~ 178 (549)
T cd07127 99 GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQG 178 (549)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCC
Confidence 5778999999999999999999999999999999999999865431 79999999999998877654432211 001
Q ss_pred ------cccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH----HHHHHHHHHcCCCCCcEE
Q 013526 90 ------LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA----LYFAHLAKLAGVPDGVLN 159 (441)
Q Consensus 90 ------~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~----~~l~~~l~~aglP~~~v~ 159 (441)
.....+++|+||+++|+|||||+++.+.++++||++||+||+|||+.+|+++ ..+.++|.++|+|+|+||
T Consensus 179 ~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~ 258 (549)
T cd07127 179 KHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVT 258 (549)
T ss_pred CcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEE
Confidence 1123478999999999999999999999999999999999999999999875 456689999999999999
Q ss_pred EEeCC-chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhcc
Q 013526 160 VVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 238 (441)
Q Consensus 160 ~~~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~ 238 (441)
++++. +.+.++.|+.||.++.|.||||+.+++.|.+.++ .+++++|+|||||+||++|+|++.+++.+++++|.++
T Consensus 259 ~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~s 335 (549)
T cd07127 259 LAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYS 335 (549)
T ss_pred EEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccC
Confidence 99984 4678999999999999999999999999999875 3799999999999999999999999999999999999
Q ss_pred CCCcccCceEEEeCc---------cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 239 GEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 239 Gq~C~~~~~v~V~~~---------~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
||.|++++|+|||++ +||+|+++|+++++++ +|+|.+..+.+||++++.+++++.+ ++..|. +++
T Consensus 336 GQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~ 409 (549)
T cd07127 336 GQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLL 409 (549)
T ss_pred CCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEE
Confidence 999999999999999 8999999999999999 9999999999999999999999854 555665 778
Q ss_pred CCCcCC---CCC-ceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCC--C-CcEEEEecCCHHHHHHH
Q 013526 310 GGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR--Y-GLAAGIMTKDLNVANTV 382 (441)
Q Consensus 310 gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~~v~s~d~~~~~~~ 382 (441)
||.... ..| +|++|||+.+.+++|+++++|+||||++|++|+|.+|+++++|++. + +|+++|||+|.+.++++
T Consensus 410 gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~ 489 (549)
T cd07127 410 ASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERV 489 (549)
T ss_pred cCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHH
Confidence 876542 134 4669999998889999999999999999999999999999999973 4 69999999999999999
Q ss_pred HHhc-cc-eEEEEcCcCCCCCC--CCccCCCCCCCCCcch-HHHHHhhhhccEEE
Q 013526 383 SRSI-RA-GIIWINCYFAFDSD--CPYGGYKMSGFGRDCG-LESLHNYLQVKSVV 432 (441)
Q Consensus 383 ~~~l-~~-g~v~vN~~~~~~~~--~p~GG~~~SG~g~~~g-~~~l~~~t~~k~v~ 432 (441)
.+++ ++ |.++||++...... +||||.+.||.....| ......|...|--+
T Consensus 490 ~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~~ 544 (549)
T cd07127 490 QEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFRV 544 (549)
T ss_pred HHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceEE
Confidence 9995 44 59999977654444 5599999999886444 56666777665433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=559.28 Aligned_cols=370 Identities=20% Similarity=0.234 Sum_probs=323.3
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhh-------hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++.++|.++|+++++.|++++++|+++++.|+||+.. ++. ..|+..+++.+++++...+. .+..
T Consensus 13 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~-~g~~ 91 (406)
T cd07079 13 ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDP-VGEV 91 (406)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCC-Cccc
Confidence 68899999999999999999999999999999766665543 221 24899999999988876542 2332
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~aglP~~ 156 (441)
.+. +.+...+.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|
T Consensus 92 ~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~g 169 (406)
T cd07079 92 LRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPED 169 (406)
T ss_pred ccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcc
Confidence 222 1234567899999999999995 56 6788899999999999999999999999999998886 8999999
Q ss_pred cEEEEeCCch-hHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
++|++++.+. +.+..|..||++|.|+||||+.+|+.|.+.+ ++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 170 vv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f 245 (406)
T cd07079 170 AVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKT 245 (406)
T ss_pred cEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHccc
Confidence 9999998543 5688899999999999999999999998764 5999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+| .|++++|||||+++||+|+++|++.+++. |++++.|+..
T Consensus 246 ~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~----------------------------------ga~~~~g~~~-- 288 (406)
T cd07079 246 QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA----------------------------------GVELRGDEET-- 288 (406)
T ss_pred CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC----------------------------------CCEEecCHHH--
Confidence 9999 99999999999999999999999987652 4454433221
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|++|| ++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+
T Consensus 289 --~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~ 362 (406)
T cd07079 289 --LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNA 362 (406)
T ss_pred --HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeC
Confidence 1377888 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCC----CCcchHHHHHhhhhccEEEEe
Q 013526 396 YFAFDSDCPYGGYKMSGF----GRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~----g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++...+..||||.++||. |+++|.+++++||+.|+++..
T Consensus 363 ~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 363 STRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred CCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 877666789999999998 899999999999999998653
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=559.20 Aligned_cols=373 Identities=21% Similarity=0.251 Sum_probs=324.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhh-------hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++..+|.++|+++++.|++|+++|++++++|+||+.. ++. ..|+..+++.+++++.+.+.. +..
T Consensus 19 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~ 97 (417)
T PRK00197 19 KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEV 97 (417)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-ccc
Confidence 56788999999999999999999999999999988777642 222 148888999999998776543 333
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~ 156 (441)
.+. +.+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.++++++ .++|+|+|
T Consensus 98 ~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~g 175 (417)
T PRK00197 98 LDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPAD 175 (417)
T ss_pred ccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChh
Confidence 322 22335788999999999999985 4 678889999999999999999999999999988875 68999999
Q ss_pred cEEEEeCCc-hhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~~-~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
++|++++.+ .+.+..|..||++|.|+||||+.+++.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 176 v~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~ 251 (417)
T PRK00197 176 AVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKT 251 (417)
T ss_pred hEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhcc
Confidence 999999644 44778888899999999999999999998863 5899999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+| .|++++|+|||+++||+|+++|++.+++++.+. + |+...
T Consensus 252 ~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~----------------------------------~-~~~~~- 294 (417)
T PRK00197 252 QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVEL----------------------------------R-GDEAA- 294 (417)
T ss_pred CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeE----------------------------------e-cCHHH-
Confidence 9999 999999999999999999999999999875421 1 11100
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
.+ |+ |||+ +++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus 295 -~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~ 368 (417)
T PRK00197 295 -LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNA 368 (417)
T ss_pred -HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeC
Confidence 11 22 9998 467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeCCC
Q 013526 396 YFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIFN 437 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~~~ 437 (441)
+....+..||||.+.||+| +++|.+++++||+.|+++++.++
T Consensus 369 ~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~ 414 (417)
T PRK00197 369 STRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQ 414 (417)
T ss_pred CCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCe
Confidence 8776778899999999999 89999999999999999886653
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-70 Score=556.62 Aligned_cols=407 Identities=19% Similarity=0.175 Sum_probs=347.2
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
+.+.+++++++ .|+.++.++|.++|+++++.|++++++|++++.+|+|||..++...+.......+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 45666666665 3567899999999999999999999999999999999998864332333444555444432
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHH----HHHHHHc
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAKLA 151 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l----~~~l~~a 151 (441)
.+.. +. ...+.+...+.+++|+|||++|+|||||+....+++++||++||+||+|||+.+|.++..+ .+++.++
T Consensus 84 ~~~~-G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ea 161 (488)
T TIGR02518 84 MKTI-GI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEA 161 (488)
T ss_pred Cccc-ce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHc
Confidence 2221 32 2223345678899999999999999999999999999999999999999999999999974 5556899
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|+||++++++.+.++.|+.||++|.|.||||+..++.+ . ..++|+++|+|||+|+||++|||++.|++.++
T Consensus 162 GlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 162 GAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----Y-SSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred CcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----H-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999998777889999999999999999999965433 2 56799999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHH-------HhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHHc
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE 303 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 303 (441)
+++|+++||.|++.+++|||+++|++|+++|+++ .+.+++|+| .++++++||+++.++++++.++++.++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999999999999999999998 889999996 67889999999999999999999999999
Q ss_pred CCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecCCHHHH
Q 013526 304 GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKDLNVA 379 (441)
Q Consensus 304 ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d~~~~ 379 (441)
|+++++||.. .+.+++++ ++|.||||++|++|+|++|||+++|+ .+|||+++|||+|.+.+
T Consensus 317 gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a 381 (488)
T TIGR02518 317 DAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIV 381 (488)
T ss_pred CCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHH
Confidence 9999999863 24667775 79999999999999999999999887 68999999999999999
Q ss_pred HHHHHhccceEEEEcCcCC------CCCCCC-----ccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 380 NTVSRSIRAGIIWINCYFA------FDSDCP-----YGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 380 ~~~~~~l~~g~v~vN~~~~------~~~~~p-----~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
++|++++++|+|+||++.. .....| ||+++.+++. .+-+++.++..|++....
T Consensus 382 ~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 382 REFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 9999999999999997642 112233 6666666555 277888999999887765
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-70 Score=552.74 Aligned_cols=361 Identities=22% Similarity=0.258 Sum_probs=319.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHH-HHHHHHHhhhhhcCceeccccccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADKIHGEVLKMSRALQGY 93 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++ .+++++.. ...+. .....+...+
T Consensus 14 ~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~-~~~~~~~~~~ 90 (436)
T cd07122 14 EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGV-IEEDEEKGIV 90 (436)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceee-eccCCCCCeE
Confidence 58899999999999999999999999999999999999999765447777777 77777652 22222 1112344567
Q ss_pred eeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHH
Q 013526 94 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAG 169 (441)
Q Consensus 94 ~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~~v~~~~~~~~~~~ 169 (441)
++++|+||+++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|++++.+.+.+
T Consensus 91 ~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~ 170 (436)
T cd07122 91 EIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELT 170 (436)
T ss_pred EEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHH
Confidence 8899999999999999999999999999999999999999999999999888776 478999999999998777788
Q ss_pred HHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEE
Q 013526 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249 (441)
Q Consensus 170 ~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~ 249 (441)
+.|++||++|.|.||||+++++ .++ ..++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++++|
T Consensus 171 ~~l~~~~~v~~v~ftGs~~v~~----~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~ 245 (436)
T cd07122 171 QELMKHPDVDLILATGGPGMVK----AAY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVI 245 (436)
T ss_pred HHHHcCCCcCEEEEcCCHHHHH----HHH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEE
Confidence 9999999999999999999654 333 67899999999999999999999999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhcc-------ccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCcee
Q 013526 250 VQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321 (441)
Q Consensus 250 V~~~~~~~f~~~L~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~ 321 (441)
||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++.+++..+..+|++++.++
T Consensus 246 V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~---------- 315 (436)
T cd07122 246 VDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE---------- 315 (436)
T ss_pred EechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe----------
Confidence 99999999999999999887 88888 4678889999999998888877777666676666555
Q ss_pred ecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCCHHHHHHHHHhccceEEEEcCcC
Q 013526 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397 (441)
Q Consensus 322 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~ 397 (441)
+.+++++|+++ +|.||||++|++|+|++|||+++|++ +|||++||||+|..+++++++++++|.|+||+++
T Consensus 316 ----~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~ 390 (436)
T cd07122 316 ----ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPS 390 (436)
T ss_pred ----cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCc
Confidence 34778889987 56799999999999999999999997 7999999999999999999999999999999887
Q ss_pred C
Q 013526 398 A 398 (441)
Q Consensus 398 ~ 398 (441)
.
T Consensus 391 ~ 391 (436)
T cd07122 391 S 391 (436)
T ss_pred c
Confidence 5
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-69 Score=570.67 Aligned_cols=367 Identities=20% Similarity=0.238 Sum_probs=326.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CChhhhh---hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~~~---~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++.++|.++|+++++.|++++++|++++ ++|+| ||+.++. ..|+..+++.+++++.. .+..+..
T Consensus 309 ~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~-~~~~g~~ 387 (718)
T PLN02418 309 KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADM-EDPIGRV 387 (718)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcC-ccccCcc
Confidence 57789999999999999999999999999996 77999 8887643 45999999999999987 3333443
Q ss_pred ec---cccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCc---
Q 013526 84 LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV--- 157 (441)
Q Consensus 84 ~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~--- 157 (441)
.+ ...+...+.+++|+|||++|+||| |+... +++++||++||+||+|||+.+|+++..|++++.++ +|+|+
T Consensus 388 ~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~ 464 (718)
T PLN02418 388 LKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGK 464 (718)
T ss_pred ccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcc
Confidence 33 122334678899999999999999 99999 89999999999999999999999999999999999 99996
Q ss_pred -EEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhh
Q 013526 158 -LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 158 -v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~ 236 (441)
+|++++ +.+.+..|..||+++.|+||||+.. +.+.++ ..++|+++|+|||+|+||++|||++.|++.+++++|.
T Consensus 465 v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa-~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~ 539 (718)
T PLN02418 465 LIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKA-STKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTD 539 (718)
T ss_pred eEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHH-hcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCC
Confidence 999997 5678899999999999999999964 444444 5689999999999999999999999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCC
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 316 (441)
| ||.|++.+|+|||+++||+ | .+.++|++|+++|+++ +||...
T Consensus 540 n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~-- 582 (718)
T PLN02418 540 Y-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRA-- 582 (718)
T ss_pred C-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCccc--
Confidence 9 9999999999999999997 1 2488999999999999 688643
Q ss_pred CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCc
Q 013526 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~ 396 (441)
.| ++. + ++|++++||+||||++|.+|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++
T Consensus 583 ~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~ 654 (718)
T PLN02418 583 SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNAS 654 (718)
T ss_pred cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCC
Confidence 23 232 3 789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccCCCCCCC--CCcc--hHHHHHhhhhccEEEEeC
Q 013526 397 FAFDSDCPYGGYKMSGF--GRDC--GLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 397 ~~~~~~~p~GG~~~SG~--g~~~--g~~~l~~~t~~k~v~~~~ 435 (441)
+...+..||||+|+||+ |+.+ |++++++||+.|++++..
T Consensus 655 ~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 655 TRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred CCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 77667789999999999 8764 999999999999998753
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-69 Score=584.19 Aligned_cols=416 Identities=20% Similarity=0.235 Sum_probs=355.5
Q ss_pred CCCCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 2 LILPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 2 ~~~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
+...+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...++..+++.++++.
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~ 85 (862)
T PRK13805 6 MAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSY 85 (862)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHh
Confidence 34567888888774 5578999999999999999999999999999999999998754334444444443332
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK---- 149 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~---- 149 (441)
. .++..+. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 86 ~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~ 163 (862)
T PRK13805 86 K-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAV 163 (862)
T ss_pred c-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHH
Confidence 2 1111121 222234456788999999999999999999999999999999999999999999999998888864
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|+||++++.+.+.+..|+.|+++|.|.||||+..+ +.++ .+++|+++|+|||+|+||++|||++.|++.
T Consensus 164 ~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~-~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~ 238 (862)
T PRK13805 164 AAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAY-SSGKPALGVGAGNVPAYIDKTADIKRAVND 238 (862)
T ss_pred HcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHH-hcCCCeEEECCCCCeEEEeCCCCHHHHHHH
Confidence 68999999999998777889999999999999999999864 3333 678999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeE-e
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL-L 308 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v-~ 308 (441)
|++++|+|+||.|+++++||||++++++|+++|+++. +|++++.++++++++++++...|... +
T Consensus 239 i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~ 303 (862)
T PRK13805 239 ILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNADI 303 (862)
T ss_pred HHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccc
Confidence 9999999999999999999999999999999998861 58999999999999999887655432 4
Q ss_pred cCCCcC---CCCCceeecEE------EeeCCCCccccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecCC
Q 013526 309 TGGKPI---GKKGYYIEPTI------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKD 375 (441)
Q Consensus 309 ~gg~~~---~~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d 375 (441)
.||... ...|.++.||+ +.+++++|++++ |.||||++|++|+|++|||+++|+ .++||+++|||+|
T Consensus 304 ~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d 382 (862)
T PRK13805 304 VGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTND 382 (862)
T ss_pred cCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCC
Confidence 566421 12488899987 667889999887 799999999999999999999988 4899999999999
Q ss_pred HHHHHHHHHhccceEEEEcCcC----------CCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCCCC
Q 013526 376 LNVANTVSRSIRAGIIWINCYF----------AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 441 (441)
Q Consensus 376 ~~~~~~~~~~l~~g~v~vN~~~----------~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~~~ 441 (441)
.++++++++++++|+|+||.+. .+.+.+|||| |.||+|.++|+.|++.|++.|+|..+.....||
T Consensus 383 ~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 383 DELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred HHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 9999999999999999999986 3678899998 999999999999999999999998876655554
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-66 Score=516.30 Aligned_cols=358 Identities=49% Similarity=0.773 Sum_probs=336.3
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCce-eccccccc
Q 013526 13 LITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQ 91 (441)
Q Consensus 13 a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ 91 (441)
.-+|+.++.++|.++|+++++.|.+++++|++++++|+|||..+ +..|+..+++.++++++..++..+.. .....+..
T Consensus 7 ~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (367)
T cd06534 7 FKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEE-ALGEVARAIDTFRYAAGLADKLGGPELPSPDPGGE 85 (367)
T ss_pred HHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCce
Confidence 34799999999999999999999999999999999999999995 67799999999999998887665422 22235677
Q ss_pred cceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHH
Q 013526 92 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAA 171 (441)
Q Consensus 92 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~ 171 (441)
.+.+++|+||++++.|||+|+...++.+++||++||+||+|||+.+|.++..|.++|.++|+|+++++++++++++....
T Consensus 86 ~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~ 165 (367)
T cd06534 86 AYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAA 165 (367)
T ss_pred eEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999977668899
Q ss_pred HHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEe
Q 013526 172 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 251 (441)
Q Consensus 172 l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~ 251 (441)
|..|+++|.|.||||+++++.+.+.++ ..++|+++|+||+|++||++|+|++.|++.+++++|+++||.|+++++||||
T Consensus 166 l~~~~~vd~v~~tGs~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~ 244 (367)
T cd06534 166 LLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVH 244 (367)
T ss_pred HhcCCCcCEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEc
Confidence 999999999999999999999999987 6789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCC
Q 013526 252 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 331 (441)
Q Consensus 252 ~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~ 331 (441)
++++++|+++|+ ||+.++++
T Consensus 245 ~~~~~~f~~~l~------------------------------------------------------------tl~~~~~~ 264 (367)
T cd06534 245 ESIYDEFVEKLV------------------------------------------------------------TVLVDVDP 264 (367)
T ss_pred HHHHHHHHHhhc------------------------------------------------------------eeeeCCCC
Confidence 999999999987 67777888
Q ss_pred CccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCC-CCCCCccCCCC
Q 013526 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKM 410 (441)
Q Consensus 332 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~p~GG~~~ 410 (441)
+++++++|+||||++|++|++++|+++++|+.++||++||||+|.+.++++++++++|.|+||+.+.. .+..||||.++
T Consensus 265 ~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~ 344 (367)
T cd06534 265 DMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKN 344 (367)
T ss_pred CCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999886 88999999999
Q ss_pred CCCCCcchHHHHHhhhhccEEE
Q 013526 411 SGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 411 SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
||+|+++|++++++||+.|++.
T Consensus 345 sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 345 SGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-67 Score=524.40 Aligned_cols=367 Identities=19% Similarity=0.154 Sum_probs=329.2
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh----------hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 14 ITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK----------MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 14 ~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~----------~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
..|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+.. ..|+..+++.+++++....+..+..
T Consensus 8 ~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~ 87 (397)
T cd07077 8 RTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVL 87 (397)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceE
Confidence 369999999999999999999999999999999999999975422 1378889999998887654444433
Q ss_pred eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc---CCCCCcEEE
Q 013526 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---GVPDGVLNV 160 (441)
Q Consensus 84 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a---glP~~~v~~ 160 (441)
.+. ....+.+++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+.+++.++ |+|++++++
T Consensus 88 ~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~ 164 (397)
T cd07077 88 LPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLY 164 (397)
T ss_pred ecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEE
Confidence 332 3467899999999999999999999 9999999999999999999999999999999999887 999999999
Q ss_pred EeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCC
Q 013526 161 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 240 (441)
Q Consensus 161 ~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq 240 (441)
+++.+.+.+..|+.||++|.|+||||+++++.+.+.+ ..+|++.|+||++++||++|+|++.|++.+++++|+| ||
T Consensus 165 v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~---~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ 240 (397)
T cd07077 165 VPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHS---PHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QN 240 (397)
T ss_pred ecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcC---CCCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-Cc
Confidence 9986777899999999999999999999999998865 2689999999999999999999999999999999999 99
Q ss_pred CcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCce
Q 013526 241 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320 (441)
Q Consensus 241 ~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~ 320 (441)
.|+++++||||+++||+|+++|+++++. +|++++.||. +.|
T Consensus 241 ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~ 281 (397)
T cd07077 241 ACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK-----PLS 281 (397)
T ss_pred cCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-----eeE
Confidence 9999999999999999999999998764 4667776663 467
Q ss_pred eecEEEeeCCCCccccccccccceEEEEEeCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCc
Q 013526 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE----EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396 (441)
Q Consensus 321 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~ 396 (441)
+.|| ++|.+.++|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.++++++++++|.|+||+.
T Consensus 282 ~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~ 355 (397)
T cd07077 282 KETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNES 355 (397)
T ss_pred Eecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCC
Confidence 7776 788999999999999999999996 667788999999999999999999999999999999999998
Q ss_pred CCCC--CCCCccCCC--CCCCCCcch-HHHHHhhhhccEEE
Q 013526 397 FAFD--SDCPYGGYK--MSGFGRDCG-LESLHNYLQVKSVV 432 (441)
Q Consensus 397 ~~~~--~~~p~GG~~--~SG~g~~~g-~~~l~~~t~~k~v~ 432 (441)
.... ..+||||.+ .||+|+++| .+++++|++.|+++
T Consensus 356 ~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 356 SKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred ccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 7754 678999999 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-66 Score=503.04 Aligned_cols=415 Identities=30% Similarity=0.446 Sum_probs=376.5
Q ss_pred CCCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 3 ILPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 3 ~~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
+.++.+++++|++ |+.+++.+|+.+|+++++.|+.+..+|..++.+|.||++.. ...||..++++++||+.
T Consensus 145 ~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~n-aIAEVREAVDFlrYYA~ 223 (769)
T COG4230 145 TEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSN-AIAEVREAVDFLRYYAG 223 (769)
T ss_pred eecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh-HHHHHHHHHHHHHHHHH
Confidence 4566777777774 55789999999999999999999999999999999999996 67799999999999999
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++.-.+ ....+|+|.++||+|||||+..+..+++.||++||+|+-||.+++|+.+..-++++.++|+|
T Consensus 224 ~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP 292 (769)
T COG4230 224 QARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVP 292 (769)
T ss_pred HHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCC
Confidence 8764211 15678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC--CceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
++++|+++|+++.++..|+.++++++|+||||+++++.|.++++.+.+ .|++.|.||-|.+||+.+|--|.++..++.
T Consensus 293 ~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~ 372 (769)
T COG4230 293 PGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLA 372 (769)
T ss_pred hhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985444 579999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
|+|..+||+|++.+.+++++++.|..++.|+..+.++++|+|..-.+|+||+|+......++++|+..+.+|-.+. .-.
T Consensus 373 SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~-q~~ 451 (769)
T COG4230 373 SAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVH-QAA 451 (769)
T ss_pred HHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchh-hcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998884433 222
Q ss_pred cCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 313 PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 313 ~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
... ..|.|+.||++.-. +..-++.|+||||+-|++|+ ++++.|+-+|.++|||+.+|+|+-++.+.++.+++++
T Consensus 452 ~~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~a 529 (769)
T COG4230 452 APNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHA 529 (769)
T ss_pred CCCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccc
Confidence 222 37999999999533 33446899999999999996 5899999999999999999999999999999999999
Q ss_pred eEEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEE
Q 013526 389 GIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVV 432 (441)
Q Consensus 389 g~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~ 432 (441)
|.+|||.-.. .....||||.|-||+|. .+|+..|..|+..+...
T Consensus 530 GNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~~ 576 (769)
T COG4230 530 GNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPWS 576 (769)
T ss_pred cceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCcC
Confidence 9999999876 45789999999999995 88999999999776543
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=511.20 Aligned_cols=371 Identities=18% Similarity=0.157 Sum_probs=315.8
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCh--hh---hhhccHHHHHHHHHHHHHhhhhhcC
Q 013526 13 LITVHGHVFLEPRGIMLKFADLIEEHAEVLAVL------EALDAGKLH--SW---AKMGDIPGAANTLRYYAGAADKIHG 81 (441)
Q Consensus 13 a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~--~~---~~~~ev~~~~~~l~~~~~~~~~~~~ 81 (441)
...|+.++.++|.++|+++++.|++++++|+++ ++.|+|||. .+ .+..|+..+++.++++++.++.. +
T Consensus 5 ~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~~~-g 83 (398)
T TIGR00407 5 ANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELADPV-G 83 (398)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCC-c
Confidence 347999999999999999999999999999999 999999994 21 13468999999999999887653 4
Q ss_pred ceecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHH----HHHcCCC
Q 013526 82 EVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVP 154 (441)
Q Consensus 82 ~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~----l~~aglP 154 (441)
..++. ..+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++ +.++|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP 161 (398)
T TIGR00407 84 KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLP 161 (398)
T ss_pred ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCC
Confidence 43332 23556788999999999999997 7 66888999999999999999999999999999999 5699999
Q ss_pred CCcEEEEeCCc-hhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 155 ~~~v~~~~~~~-~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
+|+||++++.+ .+.+..|..||++|.|.||||+.+++.+.+. ..+|+++|+|||+|+||++|||++.|++.++++
T Consensus 162 ~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~ 237 (398)
T TIGR00407 162 VGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNA 237 (398)
T ss_pred hhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhh
Confidence 99999999744 4578889999999999999999999888764 358999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|. +||.|++++|+|||+++||+|+++|.+.++++.+. +++ .+.+++++.. | |
T Consensus 238 ~~~-~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~v~~----g------~-- 290 (398)
T TIGR00407 238 KTQ-RPSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKLLEL----G------P-- 290 (398)
T ss_pred hcC-CCCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHHHhc----c------C--
Confidence 996 59999999999999999999999999999876431 111 1333333321 1 1
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
||++ + .++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+|
T Consensus 291 ---------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~i 358 (398)
T TIGR00407 291 ---------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYH 358 (398)
T ss_pred ---------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEE
Confidence 3554 2 337899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCC----CCCCCcchHHHHHhhhhcc
Q 013526 394 NCYFAFDSDCPYGGYKM----SGFGRDCGLESLHNYLQVK 429 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~----SG~g~~~g~~~l~~~t~~k 429 (441)
|+++...+..|||=-.+ ++..+.+|+.+++.||..|
T Consensus 359 N~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 359 NASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99988777789973332 2445688999999998765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-66 Score=487.42 Aligned_cols=430 Identities=26% Similarity=0.419 Sum_probs=390.2
Q ss_pred CCHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLITVH--------GHVFLEPRGIMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~~~~--------~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
++..+++.||+.+ ..|+.+|.+++.++++.++ +++-+|..+.+...||...++-..-+.+.++++|+.+..
T Consensus 93 A~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~y 172 (561)
T KOG2455|consen 93 ATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKY 172 (561)
T ss_pred ccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHH
Confidence 5677888888655 5799999999999999999 889999999999999999975222266778889988888
Q ss_pred hhhhcCceecc-ccccccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+..+....... ..+..+..+++|+ |.|..|+|+||.....-...+||| +||+|+||||..+.++..++.++|++||+
T Consensus 173 a~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGl 251 (561)
T KOG2455|consen 173 ASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGL 251 (561)
T ss_pred HHHhhhcCCccccCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCC
Confidence 87765543222 4678889999999 999999999999988888889999 69999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHh-----hcCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a-----~~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
|+|++|+++++++..++.+..+|++.++.||||..+-+.+.+..+ +....+++.|+||+|.-+|+++||++.++.
T Consensus 252 P~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~ 331 (561)
T KOG2455|consen 252 PPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVS 331 (561)
T ss_pred CccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHH
Confidence 999999999999999999999999999999999999998877664 245678999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHHc-CCe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE-GAT 306 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~ 306 (441)
..++++|.++||.|.+.+|+||+++.++.+.++|.+.-+++++|+| .|.++.+||+|+...+.+++++|+.|+.. ..+
T Consensus 332 ~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~le 411 (561)
T KOG2455|consen 332 STVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELE 411 (561)
T ss_pred HHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccce
Confidence 9999999999999999999999999999999999999999999998 88999999999999999999999999864 368
Q ss_pred EecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHH
Q 013526 307 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVS 383 (441)
Q Consensus 307 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~~ 383 (441)
+++||+++++.|+|+.|||+...+|.+++|.||+||||++|+.|+| ++|+++++ |.++|+|+.+||++|.+.+++..
T Consensus 412 iL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~ 491 (561)
T KOG2455|consen 412 ILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHAL 491 (561)
T ss_pred eeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 88999999 66899999999999999999999
Q ss_pred Hhcc--ceEEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 384 RSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 384 ~~l~--~g~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
++++ +|..|||+..+ .....||||-+.||+.. .+|++-+.+|+.+++|.-++
T Consensus 492 ~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt~ 548 (561)
T KOG2455|consen 492 DVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKETF 548 (561)
T ss_pred HHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhcc
Confidence 9986 89999999877 44789999999999885 78899999999998876554
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=533.93 Aligned_cols=365 Identities=18% Similarity=0.193 Sum_probs=312.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc---------------cHHHHHHHHHHHHHhhhhh
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIPGAANTLRYYAGAADKI 79 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~---------------ev~~~~~~l~~~~~~~~~~ 79 (441)
+|+.++.++|.++|+++++.|++++++|+ .++||++.++... |+..+++.++++++. ...
T Consensus 301 ~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~-~~~ 375 (715)
T TIGR01092 301 MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAM-EDP 375 (715)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcC-CCc
Confidence 67789999999999999999999999996 5778887754321 477788888888773 333
Q ss_pred cCceecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCC
Q 013526 80 HGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156 (441)
Q Consensus 80 ~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~ 156 (441)
.+...+. ..+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|+++..|++++.++ +|++
T Consensus 376 ~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g 452 (715)
T TIGR01092 376 IGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIH 452 (715)
T ss_pred ccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCC
Confidence 3333321 12334567899999999999999 9998 589999999999999999999999999999999999 9987
Q ss_pred ----cEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 157 ----VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 157 ----~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+++++++ ..+.+..|..|+.+|.|+||||+.+++.|++.++ +|+++|+|||+|+||++|||++.|++.++.
T Consensus 453 ~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~ 527 (715)
T TIGR01092 453 VGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRD 527 (715)
T ss_pred CCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHH
Confidence 6899985 5667888999999999999999999999998753 999999999999999999999999866666
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++| ++||.|++++|||||++++++ | .+.++++.++++|++++ ||.
T Consensus 528 ~~~-~~GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~ 572 (715)
T TIGR01092 528 AKC-DYPAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGP 572 (715)
T ss_pred HhC-CCCCccccCcEEEEehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCc
Confidence 665 559999999999999999985 1 25677888888999985 775
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.. . .|+. ..+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+
T Consensus 573 ~~--~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~ 644 (715)
T TIGR01092 573 RF--A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVF 644 (715)
T ss_pred ch--h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 43 1 2332 13568999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCC----cchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGR----DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~----~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++....+..||||.++||+|+ .+|++++++||+.|++.+..
T Consensus 645 vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 645 HNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred EeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 99986666778999999999995 47999999999999998764
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-65 Score=483.25 Aligned_cols=412 Identities=41% Similarity=0.744 Sum_probs=379.9
Q ss_pred CCCCHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH
Q 013526 3 ILPSRQHVRRLITVH----------GHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 72 (441)
Q Consensus 3 ~~~~~~~~~~a~~~~----------~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 72 (441)
.++...++++|++++ +++..+|.+.+.++++.+++|+++|+.+.+++.|....-+...-+.-+++.+||+
T Consensus 454 ~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryf 533 (881)
T KOG2452|consen 454 SLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYF 533 (881)
T ss_pred ehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHh
Confidence 456667788777554 6799999999999999999999999999999999776655555677889999999
Q ss_pred HHhhhhhcCceeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH
Q 013526 73 AGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 148 (441)
Q Consensus 73 ~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l 148 (441)
+.|.+++++.++|.. ........++|+|||.+|.|||||+..+.|+.+.+|++- ..++.
T Consensus 534 agwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~-----------------~~k~~ 596 (881)
T KOG2452|consen 534 AGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ-----------------VLKFA 596 (881)
T ss_pred hhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH-----------------Hhhhh
Confidence 999999999988874 234567889999999999999999999999999988642 11222
Q ss_pred HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 149 ~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
+ -.|++|+++|.+.-.++.|..||+++.|-||||++.+..+++.++.++.|++.+|+||++|+|+..|+|+++|+.
T Consensus 597 e----~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~ 672 (881)
T KOG2452|consen 597 E----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQ 672 (881)
T ss_pred h----hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHH
Confidence 2 246899999988888999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.-..+.|++-|..|++..|+||..++.|+|++++++..+++++|+|+|.+++-||.-...+..++..+.+.++..|+++.
T Consensus 673 ~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~ 752 (881)
T KOG2452|consen 673 MGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLV 752 (881)
T ss_pred hhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
|||+..+..|.|++|||+.++.+.|-+..||-||||+.|.+|+| ++++++.+|.+++||+++|||+|...+.++++.+
T Consensus 753 ~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l 832 (881)
T KOG2452|consen 753 CGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKL 832 (881)
T ss_pred ECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhh
Confidence 99999999999999999999999999999999999999999976 8899999999999999999999999999999999
Q ss_pred cceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 387 ~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
.+|+|+||...-.+...||||+++||+|...|.+++.+|...|+|++.+
T Consensus 833 ~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 833 QAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred ccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence 9999999998878889999999999999999999999999999998753
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-62 Score=445.40 Aligned_cols=430 Identities=26% Similarity=0.434 Sum_probs=395.7
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+|.++.+.++ .|...+...|.++++++.|.|+..-+-|-+++++|+||-..| -.+|++.-++.++|...+
T Consensus 51 ~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilae-gvgevqeyvdicdyavgl 129 (507)
T KOG2453|consen 51 NASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAE-GVGEVQEYVDICDYAVGL 129 (507)
T ss_pred hccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhh-cchhHHHHHHHHHHhhhh
Confidence 35666666665 455778999999999999999999999999999999999997 578999999999999999
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHH----HHHHHH
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l----~~~l~~ 150 (441)
.+++.+..+|.. ++.-...++-|+|+|.+|+.+|||....-|.-..|+.+||+|+|||++.+|+++... .+.|.+
T Consensus 130 sr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~q 209 (507)
T KOG2453|consen 130 SRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQ 209 (507)
T ss_pred hhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhc
Confidence 888888888775 566677889999999999999999999999999999999999999999999876654 555666
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
--+|.+.....+| +.+.+.++..+.++..+.||||++.++.+.+... .+..+..+|+||+|+.||.+|||+..++...
T Consensus 210 nnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq-arfgk~llelggnnaiiv~edadl~lvvps~ 287 (507)
T KOG2453|consen 210 NNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ-ARFGKLLLELGGNNAIIVNEDADLNLVVPST 287 (507)
T ss_pred cCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHH-HHhhhHHHhhcCCceEEEeccccceeeehHH
Confidence 6789998888888 6788999999999999999999999999988876 5667889999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++...+||+|+..+|+++|+++||+.+++|++..+++++|.|+|+.+-+||+.+++.....+..++++++.|+++.+|
T Consensus 288 lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yg 367 (507)
T KOG2453|consen 288 LFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYG 367 (507)
T ss_pred HHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc--cc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~ 388 (441)
|+..+.+|+|++|||++ ...|.++..+|.|.||+.|.+|++++||+++-|..+.||+.||||+|...+-+...-. ++
T Consensus 368 gkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdc 446 (507)
T KOG2453|consen 368 GKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDC 446 (507)
T ss_pred CEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCcc
Confidence 99998999999999997 8899999999999999999999999999999999999999999999999988888765 78
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 437 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~ 437 (441)
|.|.||-++. ...+-.|||.|.+|.|++.|.+++++|+++.++++++++
T Consensus 447 givnvniptsgaeiggafggek~tgggresgsdswkqymrrstctinysk 496 (507)
T KOG2453|consen 447 GIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINYSK 496 (507)
T ss_pred ceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeeccc
Confidence 9999999876 346778999999999999999999999999999999874
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=272.24 Aligned_cols=345 Identities=14% Similarity=0.145 Sum_probs=247.2
Q ss_pred cCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH--HHHHhhhhhcCc--eecc--
Q 013526 17 HGHVFLEPRGIMLKFADLIE----EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR--YYAGAADKIHGE--VLKM-- 86 (441)
Q Consensus 17 ~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~--~~~~~~~~~~~~--~~~~-- 86 (441)
...+.++..+.+.++.+.+. .++.+..+.+..-+|.+... ....+......++ .......+..+. .+..
T Consensus 22 ~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~-~~~a~~~l~~~~~r~~l~~~l~~el~~~~~Ld~w~ 100 (422)
T cd07080 22 AALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEM-LREGLKRLMALFRRENLERILERELGSPGILDEWV 100 (422)
T ss_pred hcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHH-HHHHHHHHHHHcCHHHHHHHHHHhcCCcccccCCc
Confidence 35688888888888888875 34556666777778888663 3334333333332 111111111111 1110
Q ss_pred ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC----CcEEEEe
Q 013526 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVVP 162 (441)
Q Consensus 87 ~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~----~~v~~~~ 162 (441)
+.+...+++++|+|++++|+|||+|+ ..++.++.||++||++|+|||+.+|.++..|.++|.++ +|+ +.++++.
T Consensus 101 ~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~ 178 (422)
T cd07080 101 PPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVY 178 (422)
T ss_pred cCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEE
Confidence 12456688999999999999999999 78999999999999999999999999999999999999 787 8888884
Q ss_pred --CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCC-CceeecCCC----CHHHHHHHHHHHHh
Q 013526 163 --GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK-SPLLIFDDV----DVNTAADMALLGIL 235 (441)
Q Consensus 163 --~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~-~~~iV~~da----d~~~aa~~i~~~~~ 235 (441)
+.+.+..+.|..++ |.|+||||+++++.|++.++ .+ +.++|+||| ++.|+.+++ |++.+++.++++++
T Consensus 179 ~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~ 253 (422)
T cd07080 179 WPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC 253 (422)
T ss_pred ecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH
Confidence 54555788898887 99999999999999999876 33 568999999 555555568 99999999999999
Q ss_pred hccCCCcccCceEEEeCcc---HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 236 FNKGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~---~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
.++||.|.|+++||||+++ +++|.++|.++++++.-..|.. ++ +.....++...-..+.-.+.+....+
T Consensus 254 ~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~~~- 325 (422)
T cd07080 254 RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGVSR- 325 (422)
T ss_pred HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCCCC-
Confidence 9999999999999999999 9999999999999875433321 11 33333333332222222221111111
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGI 390 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~ 390 (441)
+.++ ||+...... +. ....+=.+.|+++++++|++..++. +--|+++|..+.+. .++++++. .|.
T Consensus 326 ---~~~~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~Gv 391 (422)
T cd07080 326 ---DLGW----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAAGV 391 (422)
T ss_pred ---CCCe----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHcCc
Confidence 1222 344333322 11 1455668899999999999999985 66799999988877 77887775 443
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=261.12 Aligned_cols=371 Identities=19% Similarity=0.204 Sum_probs=288.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCChhhhhh-----ccHHHHHHHHHHHHHhhhhhcCce--e
Q 013526 18 GHVFLEPRGIMLKFADLIEEHAEVLAVLEALD------AGKLHSWAKM-----GDIPGAANTLRYYAGAADKIHGEV--L 84 (441)
Q Consensus 18 ~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e------~Gk~~~~~~~-----~ev~~~~~~l~~~~~~~~~~~~~~--~ 84 (441)
.++.++|.+.|.++++.|++++++|.++.++| +|.+....-+ .-+..+++.++..+.+.++..... .
T Consensus 21 ~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~gl~~Va~L~DPvGev~~~~ 100 (417)
T COG0014 21 TLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADGLRQVAALPDPVGEVIDGW 100 (417)
T ss_pred hcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHHHHHHhcCCCchHhhhccc
Confidence 57899999999999999999999999887765 3433221101 124445555565555554432211 1
Q ss_pred ccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHH----HHHcCCCCCcEEE
Q 013526 85 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNV 160 (441)
Q Consensus 85 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~----l~~aglP~~~v~~ 160 (441)
..+.|.+.+.++.|+||+++|.-. .| +.+.....-+|++||+||+|.+..+..+...++++ |.++|+|.+.||+
T Consensus 101 ~~~nGL~i~~~rvPLGVigvIYEs-RP-nVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVql 178 (417)
T COG0014 101 TLPNGLQIYRVRVPLGVIGVIYES-RP-NVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQL 178 (417)
T ss_pred cCCCCCEEEEEEccceEEEEEEec-CC-ccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhh
Confidence 124688899999999999999763 23 34556678899999999999999999888887766 5677999999999
Q ss_pred EeCCchhHH-HHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccC
Q 013526 161 VPGFGPTAG-AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239 (441)
Q Consensus 161 ~~~~~~~~~-~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~G 239 (441)
++.++.+.. +.|.....+|.|+-.|+..-.+.+.+.+ ..||+-.+-|++.++|+.+||++.|.+-++++++...+
T Consensus 179 i~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs 254 (417)
T COG0014 179 IEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS 254 (417)
T ss_pred ccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc
Confidence 998655544 5555577799999999999888887764 48999999999999999999999999999999999988
Q ss_pred CCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCc
Q 013526 240 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319 (441)
Q Consensus 240 q~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~ 319 (441)
.|.+.+.++||+.+.++|+..|.+.+....+.--- ++ ...+.+.+ .+
T Consensus 255 -~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~----------d~----~~~~~~~~-----------------~~- 301 (417)
T COG0014 255 -VCNAAETLLVHRAIAKSFLPKLANALQEAGVELRG----------DA----EALALLPD-----------------AV- 301 (417)
T ss_pred -ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEc----------CH----HHHHhccc-----------------cC-
Confidence 99999999999999999999999988743211000 11 11111110 00
Q ss_pred eeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCC
Q 013526 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 399 (441)
Q Consensus 320 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~ 399 (441)
.+....-+..|...+++.|..++++++||+.+|..+.+|+-+|.|+|...+++|.+.+++..||||.++.|
T Consensus 302 ---------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRF 372 (417)
T COG0014 302 ---------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRF 372 (417)
T ss_pred ---------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEeccccc
Confidence 12233346789999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccCCCCCC----CCCcchHHHHHhhhhccEEEEeCC
Q 013526 400 DSDCPYGGYKMSG----FGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 400 ~~~~p~GG~~~SG----~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
..+.-||--.+-| ..+.+|+.|++++|..|++....+
T Consensus 373 tDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G 413 (417)
T COG0014 373 TDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG 413 (417)
T ss_pred ccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence 7766665433333 457889999999999999877543
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=199.70 Aligned_cols=377 Identities=19% Similarity=0.195 Sum_probs=277.7
Q ss_pred HHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCChhhhhhc-----cHHHHHHHHHH
Q 013526 7 RQHVRRLITVH----GHVFLEPRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWAKMG-----DIPGAANTLRY 71 (441)
Q Consensus 7 ~~~~~~a~~~~----~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~~~~~-----ev~~~~~~l~~ 71 (441)
.+..+.|.+.. .++.++|.++|.++++.|..+...+..+. ++++|.......+. .+.....-++.
T Consensus 3 e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~~ 82 (433)
T KOG4165|consen 3 EEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLRQ 82 (433)
T ss_pred HHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHHH
Confidence 34445555443 67999999999999999998877776644 34556433322222 22333333443
Q ss_pred HHHhhhhhcCce---eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH
Q 013526 72 YAGAADKIHGEV---LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 148 (441)
Q Consensus 72 ~~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l 148 (441)
.++. +..-|.. .....+...+....|+||.++|--.. | -.+..-..-|+++||.+++|....+..+...|.++.
T Consensus 83 ia~~-edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESR-P-d~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v 159 (433)
T KOG4165|consen 83 IAEL-EDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESR-P-DCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLV 159 (433)
T ss_pred HHhc-ccchhhheeeeeccCCceEEEeeccceEEEEEeccC-c-hHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHH
Confidence 3332 1112221 12236777888999999999995532 2 233344567899999999999999988888888776
Q ss_pred HHc----CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHH
Q 013526 149 KLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 224 (441)
Q Consensus 149 ~~a----glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~ 224 (441)
.++ |.|.+.++++.. .+++.+.|.-...+|.|+-.||+.-.++|.... ..||..+..|.+.++|+.|+|++
T Consensus 160 ~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~dad~~ 234 (433)
T KOG4165|consen 160 QEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDADLD 234 (433)
T ss_pred HHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEeccccCHH
Confidence 655 778999999998 567888888888899999999999999887753 38999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCcccCceEEEeCcc-HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc
Q 013526 225 TAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303 (441)
Q Consensus 225 ~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 303 (441)
.|-+-+..+++-+.. .|.+.+.+++|++. ...|.+.|...++. +
T Consensus 235 kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~----------------------------------~ 279 (433)
T KOG4165|consen 235 KAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE----------------------------------E 279 (433)
T ss_pred HHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh----------------------------------c
Confidence 998888888776655 89999999999983 34455555444332 2
Q ss_pred CCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013526 304 GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383 (441)
Q Consensus 304 ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 383 (441)
|.++.+|- ....-..| -+++..-++.|.-.-.+++-.++|.++||+.+|..+.+++-.|.|+|.+.+++|.
T Consensus 280 gVtl~agp-kl~~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl 350 (433)
T KOG4165|consen 280 GVTLHAGP-KLAALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL 350 (433)
T ss_pred CeEEecCh-hHHhhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH
Confidence 22222221 11100001 1344555778888889999999999999999999999999999999999999999
Q ss_pred HhccceEEEEcCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeC
Q 013526 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 384 ~~l~~g~v~vN~~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~ 435 (441)
..+++..|++|.++.+..++-||=--+-|+. +.+|+-|++..+..|++.+..
T Consensus 351 ~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 351 KHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred hccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence 9999999999999999988888654444543 577999999999999987653
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-17 Score=162.89 Aligned_cols=374 Identities=17% Similarity=0.133 Sum_probs=246.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH--HHhhhhhcCce--ecc-cccc
Q 013526 18 GHVFLEPRGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY--AGAADKIHGEV--LKM-SRAL 90 (441)
Q Consensus 18 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~--~~~~~~~~~~~--~~~-~~~~ 90 (441)
.+|.++-.++|.++++.+... .....+.+..-+|.+... ... +......++.- ....++..+.. +.. .+..
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~-~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~ 79 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEM-VEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRG 79 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHH-HHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccc
Confidence 357778888888888887753 233666777778888774 222 33333322211 11111111211 110 1223
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC----CcEEEE--eCC
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PGF 164 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~----~~v~~~--~~~ 164 (441)
..+..+.|.|++++|.|.|.|+..... ++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++.
T Consensus 80 ~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~ 157 (399)
T PF05893_consen 80 DGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG 157 (399)
T ss_pred cchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence 377889999999999999999977665 778888999999999999999999999999887 554 456666 344
Q ss_pred chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCccc
Q 013526 165 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 244 (441)
Q Consensus 165 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~ 244 (441)
+.++.+.+.. ..|.++.+||.++.+.+.+.+ +..++.+.++.-.+..++..+++++.+++.+.+..+...+|.|.|
T Consensus 158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS 233 (399)
T PF05893_consen 158 DEELEEALSQ--QADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS 233 (399)
T ss_pred chHHHHHHHH--HCCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence 5556666764 489999999999999999943 677888999999999999999999999999999999999999999
Q ss_pred CceEEEeC---ccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHH-----HHHHcCCeEecCCCcCCC
Q 013526 245 SSRVYVQE---GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE-----HGKREGATLLTGGKPIGK 316 (441)
Q Consensus 245 ~~~v~V~~---~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~ga~v~~gg~~~~~ 316 (441)
|+.|||.. .-.++|.++|.+.+.+..---|... .+......+....+ .+...+.++..+...
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--- 303 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN--- 303 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC---
Confidence 99999993 3368888888877776422222111 12222222222222 233333344422221
Q ss_pred CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc-cceEEEEcC
Q 013526 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC 395 (441)
Q Consensus 317 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~ 395 (441)
.-||+....+ ......++=.+.|+++++.+|++.+++....--|++++..+ ....++++.+ ..|.-.|=
T Consensus 304 -----~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv- 373 (399)
T PF05893_consen 304 -----SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIV- 373 (399)
T ss_pred -----CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeC-
Confidence 1245543321 22334456689999999999999999976432478887644 4566666644 45543332
Q ss_pred cCCCCCCCCccCCCCCCCC-CcchHHHHHhhhh
Q 013526 396 YFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQ 427 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~ 427 (441)
|.|-...--.| .+-|.+.|.+|++
T Consensus 374 --------~~G~m~~~~~g~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 374 --------PLGQMLDFDPGWPHDGMYPLRRLVR 398 (399)
T ss_pred --------CCCcCCCCCCCCCcCCHhHHHHHhC
Confidence 22222211122 4457788887765
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.1e-14 Score=113.30 Aligned_cols=145 Identities=28% Similarity=0.371 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHH-cCCeEecCCCcCCCCCceeecEEEeeCCCCc
Q 013526 255 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 255 ~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 333 (441)
.....+.|++..+.+++-+...+++|. .+..+++.+.|+...- .|..+..-|. ..|.|..||+|. ++|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 356677888888888888877777776 5667777777765211 2223333332 489999999997 99999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC-CCCCCCccCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGY 408 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~p~GG~ 408 (441)
.++.||+||||+..+.-++++|+|.++|+++||....+||++.+.++++....++|.+.+|-+-. ..+...|.|-
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~ 154 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGD 154 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999998643 3455556553
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.7e-10 Score=100.31 Aligned_cols=174 Identities=21% Similarity=0.253 Sum_probs=129.0
Q ss_pred CceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHH
Q 013526 213 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 292 (441)
Q Consensus 213 ~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 292 (441)
.-+||++|.|++.|+..++.+.-.--| ..+...|+|||++.++|+++++.+++.+ ++... +...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~va-----~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQVA-----NHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhhc-----cCcHHHH
Confidence 458999999999999999998754443 4578899999999999999999998765 22222 2233444
Q ss_pred HHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcC-CCCcEEEE
Q 013526 293 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT-RYGLAAGI 371 (441)
Q Consensus 293 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~v 371 (441)
..+.++ .-+++++.+.... .-..-.|.++.|.+.. .+- +--.+|+++..|++..||+++.+.. ...-+++|
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~--~fg-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsi 144 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHS--YFG-DGPTGVITLHTFRTPKEAIELCAKETLPFDSVSI 144 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHH--HcC-CCCCeEEEEEccCCHHHHHHHHhcCCCCcceEEE
Confidence 444444 4678888884432 2234568888876533 222 2445899999999999999999874 23359999
Q ss_pred ecCCHHHHHHHHHhccceEEEEcCcCC-CCCCCCccC
Q 013526 372 MTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGG 407 (441)
Q Consensus 372 ~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~p~GG 407 (441)
|++..+.+-+++.+++..+++|||... ..|-.++-.
T Consensus 145 W~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~ 181 (215)
T PF07368_consen 145 WNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFA 181 (215)
T ss_pred eCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhh
Confidence 999999999999999999999999876 334444433
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.8e-07 Score=100.69 Aligned_cols=104 Identities=18% Similarity=0.136 Sum_probs=84.1
Q ss_pred ceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEE
Q 013526 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 161 (441)
Q Consensus 82 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~ 161 (441)
..+|.++|+.+..+..|+|+++|++||| ..++.++..||++||+||++|++.++. . .+.+|..+.+.+
T Consensus 1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI 1129 (1208)
T ss_pred ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc
Confidence 3578889999999999999999999999 557779999999999999999988652 1 123566555544
Q ss_pred eCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC
Q 013526 162 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202 (441)
Q Consensus 162 ~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~ 202 (441)
. .+..+..++.++.|.|+|+.++.+.+.+.++++.+
T Consensus 1130 ~-----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G 1165 (1208)
T PRK11905 1130 D-----WTQDWEADDPFAGALLEGDAERARAVRQALAARPG 1165 (1208)
T ss_pred c-----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCC
Confidence 2 23466777889999999999999999999986543
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=98.38 E-value=0.00071 Score=67.21 Aligned_cols=337 Identities=20% Similarity=0.165 Sum_probs=155.2
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh---hhhccHHHHH--------HHHHHHHHhhhhhc
Q 013526 12 RLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW---AKMGDIPGAA--------NTLRYYAGAADKIH 80 (441)
Q Consensus 12 ~a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~---~~~~ev~~~~--------~~l~~~~~~~~~~~ 80 (441)
+++.....+.++-.+..+.+.+.++++-|+-+...++...+-..+ ....|+..+. +.|+..+..++.++
T Consensus 2 ~ll~R~~~~~~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh 81 (412)
T PF00815_consen 2 KLLKRSALDDSEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFH 81 (412)
T ss_dssp HHT--------HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred chhcCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 344444555566667777777777777776666566654322110 0112333222 12222222222221
Q ss_pred -------CceeccccccccceeecccceEEEECC-CccchHhh-HHHHHHHHhhCCeEEE--eCCCcchHHHHHHHHHHH
Q 013526 81 -------GEVLKMSRALQGYTLREPIGVVGHIIP-WNFPTTMF-FMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 81 -------~~~~~~~~~~~~~~~~~P~Gvv~~i~p-~n~P~~~~-~~~i~~AL~aGn~vv~--kps~~~~~~~~~l~~~l~ 149 (441)
.......+|......+.|+--|.++.| ..+|+.+. +...+||-.+|..=|+ -|+...-.....+.-...
T Consensus 82 ~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~ 161 (412)
T PF00815_consen 82 EAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAH 161 (412)
T ss_dssp HTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHH
T ss_pred HHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHH
Confidence 112223357778899999999999999 44555433 4468899999987654 444432222334444555
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCc--eeecCCCCH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDV 223 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~--~iV~~dad~ 223 (441)
.+|.. .+..-.|.....+|.- -|+||.|+=.|..-+...=+...+ .-+.- -..|.+= +|-++++|.
T Consensus 162 ~~Gv~----evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~V~ID---~~AGPSEv~ViAD~~A~p 233 (412)
T PF00815_consen 162 LAGVD----EVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-DVGID---MIAGPSEVLVIADETANP 233 (412)
T ss_dssp HTT-S----EEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S-EES---------EEEEEE-TTS-H
T ss_pred HcCCC----EEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-CcccC---CCCCCCceEEEECCCCCH
Confidence 66764 2333335444444443 588999999998765442222221 11111 1233333 334567899
Q ss_pred HHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHc
Q 013526 224 NTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303 (441)
Q Consensus 224 ~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 303 (441)
+..|.+++.-+=+... .+.++|..+ +++.+++.+.+.+..-.-| .. +.++.+.+
T Consensus 234 ~~vAaDLLaQAEHd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~-----------r~-------~i~~~sl~- 287 (412)
T PF00815_consen 234 EFVAADLLAQAEHDPD-----AQAVLVTTS--EELAEAVEAEVERQLEELP-----------RR-------EIAEKSLE- 287 (412)
T ss_dssp HHHHHHHHHHHTT-TT------EEEEEES---HHHHHHHHHHHHHHHTT-T-----------TH-------HHHHHHHT-
T ss_pred HHHHHHHHHHhccCCC-----CceEEEECC--HHHHHHHHHHHHHHHHhCC-----------ch-------HHHHHHHH-
Confidence 9999988876544432 345666655 4555555554443210001 11 11122221
Q ss_pred CCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013526 304 GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383 (441)
Q Consensus 304 ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 383 (441)
+ -.++.++|++|+++++|..- .-...|.++|+ ..+.
T Consensus 288 -------------------------------------~---g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~ 323 (412)
T PF00815_consen 288 -------------------------------------N---GAIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELL 323 (412)
T ss_dssp -------------------------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHG
T ss_pred -------------------------------------C---CeEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHH
Confidence 1 13556799999999999842 23677888887 5677
Q ss_pred Hhcc-ceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 384 RSIR-AGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 384 ~~l~-~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
.+++ +|.|++..+.. .+..+|.+ |..++.|.-+...|++..++
T Consensus 324 ~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 324 EKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp GG--S-SEEEESTT--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEE
T ss_pred HHhhccChhhcCCCCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeE
Confidence 7775 89999998754 23345554 55566666677788876554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.021 Score=57.15 Aligned_cols=345 Identities=19% Similarity=0.153 Sum_probs=182.1
Q ss_pred CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-h-------hhhh----hcc----HHHHHH
Q 013526 4 LPSRQHVRRLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKL-H-------SWAK----MGD----IPGAAN 67 (441)
Q Consensus 4 ~~~~~~~~~a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~-------~~~~----~~e----v~~~~~ 67 (441)
..+..+.++..........+-.+..+.+.+.++++-|+=+...++..-+- . .+.+ -.| +..+.+
T Consensus 10 ~~~~~~~~~~~~r~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~v~~~e~A~~~l~~~~~~ai~~A~~ 89 (431)
T PLN02926 10 ELSASEVDSLKARPRIDFSSILETVNPIVENVRSRGDAAVKEYTSKFDKVALDSVVERVSDLPDPVLDADVKEAFDVAYD 89 (431)
T ss_pred cCCHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCcccceeCHHHHHHhcCCHHHHHHHHHHHH
Confidence 34555666665554433444556667777777777666554444443321 0 1000 011 223333
Q ss_pred HHHHHHHhhhhhcCceeccccccccceeecccceEEEECCC-ccchH-hhHHHHHHHHhhCCeEEE--eCCCcc-hHHHH
Q 013526 68 TLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMIV--KPAEQT-PLIAL 142 (441)
Q Consensus 68 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~AL~aGn~vv~--kps~~~-~~~~~ 142 (441)
.++.|...............+|......+.|+.-+.++.|. .+|+. +++...+||-.+|..=|+ -|+... .....
T Consensus 90 nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~ 169 (431)
T PLN02926 90 NIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPE 169 (431)
T ss_pred HHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHH
Confidence 34433332211111012113566678899999999999996 33443 334468999999987554 444321 12233
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceee-
Q 013526 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI- 217 (441)
Q Consensus 143 ~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV- 217 (441)
.|+ ....+|..+ +..-.|.....+|. .-|++|.|+=.|..-+...=+...+ ...---+=-..|.+=++|
T Consensus 170 iL~-AA~~~Gv~e----Iy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G-~~~~VgID~~AGPSEvlIi 243 (431)
T PLN02926 170 VLY-CAKKAGVTH----ILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN-SEAMVSIDMPAGPSEVLVI 243 (431)
T ss_pred HHH-HHHHcCCCe----eeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC-CCCccccCCCCCCceeEEE
Confidence 333 446666542 33323544444443 3568999998888765432111111 100000111123333333
Q ss_pred -cCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCcc--HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHH
Q 013526 218 -FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI--YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 294 (441)
Q Consensus 218 -~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~--~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 294 (441)
++++|.+.+|..++.-+=+... .+.++|..+- .++..+.+.++++.+. . .
T Consensus 244 AD~tA~p~~vAaDLLaQAEHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r-------~ 296 (431)
T PLN02926 244 ADKTANPVHVAADLLSQAEHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP---------------R-------G 296 (431)
T ss_pred eCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h-------H
Confidence 4568999999888865543332 4456665552 3344444444433320 0 0
Q ss_pred HHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC
Q 013526 295 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 374 (441)
Q Consensus 295 ~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~ 374 (441)
+.++.+.++ -.|+.++|++|+++++|..- .-..-|.++
T Consensus 297 ~i~~~sl~~-----------------------------------------g~iivv~~l~ea~~~~N~~A-PEHLei~~~ 334 (431)
T PLN02926 297 EIASKALGH-----------------------------------------SFIVVARDMAEAISFSNLYA-PEHLIVNVE 334 (431)
T ss_pred HHHHHHHHC-----------------------------------------CEEEEECCHHHHHHHHHhhC-hHhheehhc
Confidence 111222211 23456799999999999842 134568888
Q ss_pred CHHHHHHHHHhc-cceEEEEcCcCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 375 DLNVANTVSRSI-RAGIIWINCYFAF---------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 375 d~~~~~~~~~~l-~~g~v~vN~~~~~---------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
|+ +.+..++ ++|.|++..+... +..+|. +|.+++.|.-+...|+++-++
T Consensus 335 ~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 335 DA---ESWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred CH---HHHHhhcCccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeE
Confidence 86 5566666 4899999776541 123444 456666666778888876554
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0031 Score=62.28 Aligned_cols=259 Identities=21% Similarity=0.253 Sum_probs=146.6
Q ss_pred ccccccceeecccceEEEECC---CccchHhhHHHHHHHHhhCCeEEE--eCCCcchHHHHHHHHHHHHcCCCCCcEEEE
Q 013526 87 SRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVV 161 (441)
Q Consensus 87 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~i~~AL~aGn~vv~--kps~~~~~~~~~l~~~l~~aglP~~~v~~~ 161 (441)
.+|......++|+--|.++.| .-||-..++ ..+||-.+|+.=|+ .|++..- ....+.-+.+.+|+.+ +.
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----Iy 178 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----VY 178 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----HH
Confidence 467788899999999999999 455554444 47899999987554 4444322 2223333334444332 11
Q ss_pred eCCchhHHHHHHhC----CCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCc-eee-cCCCCHHHHHHHHHHHHh
Q 013526 162 PGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLI-FDDVDVNTAADMALLGIL 235 (441)
Q Consensus 162 ~~~~~~~~~~l~~~----~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~-~iV-~~dad~~~aa~~i~~~~~ 235 (441)
.-.|.....+|.-. +.||.|.=.|+.-+.. ++... ....-+=+. .|.+= +|+ ++++|.+..|..++.-+=
T Consensus 179 ~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVta--AKr~v-~g~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQAE 254 (425)
T COG0141 179 KVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTA--AKRLV-SGVVGIDMI-AGPSEVLVIADETANPDFVAADLLSQAE 254 (425)
T ss_pred HccCHHHHHHHHccCCcCCccCeeeCCCcHHHHH--HHHHh-hCCcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence 11244445555544 7899999888876543 22222 111111111 23332 333 456899999988886654
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
++. ..+.|+|..+ ++|.++..+.+.+..-- ..+ .+. +..+..
T Consensus 255 Hd~-----~a~aiLvT~s--~~la~~v~~~v~~~l~~------------l~~--~ei----~~~~l~------------- 296 (425)
T COG0141 255 HDP-----DAQAILVTDS--EELAEAVEAAVERQLET------------LPR--AEI----ARKALE------------- 296 (425)
T ss_pred cCC-----CceEEEEeCc--HHHHHHHHHHHHHHHHh------------ccH--HHH----HHHHHH-------------
Confidence 433 3456677665 45555555555432100 000 111 222221
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceEEEEc
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 394 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~vN 394 (441)
-| -.|+.++|++|+++++|..- .-..-|.++|+ +.++.+++ +|.|+++
T Consensus 297 ------------------------~~---g~iilv~~l~ea~~~~N~~A-PEHLei~~~~p---~~~l~~I~nAGsIFlG 345 (425)
T COG0141 297 ------------------------NY---GAIILVDDLDEAVEISNEYA-PEHLELQTENP---RELLGKIRNAGSIFLG 345 (425)
T ss_pred ------------------------hC---CeEEEECCHHHHHHHHHhhC-hHhhhhhhcCH---HHHHHHhcccceeeec
Confidence 11 13456799999999999742 23567888886 45666664 8999999
Q ss_pred CcCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhcc
Q 013526 395 CYFAF---------DSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429 (441)
Q Consensus 395 ~~~~~---------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k 429 (441)
.++.. +..+|. +|+-++.+.-++..|.++-
T Consensus 346 ~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~ 384 (425)
T COG0141 346 HYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRS 384 (425)
T ss_pred CCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHH
Confidence 97541 233454 4445555555566666543
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.046 Score=54.41 Aligned_cols=260 Identities=16% Similarity=0.191 Sum_probs=147.6
Q ss_pred ccccccceeecccceEEEECCC-ccchHh-hHHHHHHHHhhCCeEEE--eCCCcchHHHHHHHHHHHHcCCCCCcEEEEe
Q 013526 87 SRALQGYTLREPIGVVGHIIPW-NFPTTM-FFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 162 (441)
Q Consensus 87 ~~~~~~~~~~~P~Gvv~~i~p~-n~P~~~-~~~~i~~AL~aGn~vv~--kps~~~~~~~~~l~~~l~~aglP~~~v~~~~ 162 (441)
..|......+.|+-.|.++.|. .+|+.+ ++...+||-.+|+.=|+ -|+.........| -+...+|... +..
T Consensus 99 ~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL-~Aa~~~Gv~e----Iy~ 173 (416)
T PRK13770 99 EESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVL-AACYITQVNQ----VFQ 173 (416)
T ss_pred cCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHH-HHHHHcCCCe----eec
Confidence 3556667889999999999994 445543 33468999999987665 3443211222223 2445566542 222
Q ss_pred CCchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCc--eeecCCCCHHHHHHHHHHHHhh
Q 013526 163 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGILF 236 (441)
Q Consensus 163 ~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~--~iV~~dad~~~aa~~i~~~~~~ 236 (441)
-.|.....+|. +-|.||.|+=.|..-+...=+...+ .-+.. -..|.+= +|-++++|.+..|..++.-+=+
T Consensus 174 iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g-~V~ID---~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 174 VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG-QVGID---QIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-CcCcC---CCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 22444444443 3678999998888765432111111 11111 1123333 3335568999999988865543
Q ss_pred ccCCCcccCceEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 237 NKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
.. ..+.++|..+ ..++..+++..++..+. . . +.++.++++
T Consensus 250 d~-----~a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~----------- 291 (416)
T PRK13770 250 DE-----LARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN----------- 291 (416)
T ss_pred CC-----CCcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-----------
Confidence 33 2445666544 23444444444444330 0 0 122222221
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceEEEE
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWI 393 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~v 393 (441)
+ -.++.++|++|+++++|..-. -..-|.++|+ ..+..+++ +|.|++
T Consensus 292 --------------------------~---g~ii~v~~~eeai~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFl 338 (416)
T PRK13770 292 --------------------------Q---HYLIHASNFDEACHVMNTIAP-EHASIQTVNP---QPYIEKVKYVGALFI 338 (416)
T ss_pred --------------------------C---CEEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhCCEeceecc
Confidence 1 123567999999999998421 2455888886 55667765 899999
Q ss_pred cCcCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 394 NCYFAF---------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 394 N~~~~~---------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
..+... +..+|. +|..++.+.-+...|++.-++
T Consensus 339 G~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 339 GHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred CCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceee
Confidence 876541 223444 455566666677788876554
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.018 Score=56.86 Aligned_cols=283 Identities=21% Similarity=0.195 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCC-ccchH-hhHHHHHHHHhhCCeEEE--eCCCc-
Q 013526 62 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMIV--KPAEQ- 136 (441)
Q Consensus 62 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~AL~aGn~vv~--kps~~- 136 (441)
+..+.+.++.|.....+. .......+|......+.|+.-|.++.|. +.|+. +.+...+||-.+|+.=|+ .|+..
T Consensus 53 i~~A~~~I~~fh~~q~~~-~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~ 131 (393)
T TIGR00069 53 LELAAENIRAFHEAQLPR-SWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKD 131 (393)
T ss_pred HHHHHHHHHHHHHHhCCC-CeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcC
Confidence 444555555554432211 1122223567778899999999999995 44443 334467899999987654 34422
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhh-cCCCceeeecCC
Q 013526 137 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGG 211 (441)
Q Consensus 137 ~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~-~~~~~~~~e~gg 211 (441)
.......|+ +...+|..+ +..-.|.....+|. +-|+||.|+=.|..-+.. .+.... .-+.. -..|
T Consensus 132 g~i~p~iL~-AA~~~Gv~e----Iy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID---~~AG 201 (393)
T TIGR00069 132 GKINPAVLA-AAKLAGVDE----VYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLVFGDVGID---MPAG 201 (393)
T ss_pred CCCCHHHHH-HHHHcCCCe----ehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhcCccCcC---CCCC
Confidence 112223333 446666542 23222444444443 367899999888876543 222111 11111 1123
Q ss_pred CCc--eeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCcccccCH
Q 013526 212 KSP--LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 287 (441)
Q Consensus 212 ~~~--~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~ 287 (441)
.+= +|-+++||.+..|..++.-+=+.. ..+.++|..+ ..++..+++.+++..+. .
T Consensus 202 PSEvlViAD~~Anp~~iAaDLLaQAEHd~-----~a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r- 260 (393)
T TIGR00069 202 PSEVLVIADETANPEFVAADLLSQAEHDP-----DAQAILVTTSEELAEAVQEEIERQLATLP---------------R- 260 (393)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h-
Confidence 333 333556899999988886553333 2445666544 24444444444444331 0
Q ss_pred HHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCc
Q 013526 288 KQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 367 (441)
Q Consensus 288 ~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 367 (441)
. +.+++++++ +| .++.++|++|+++++|..-. -
T Consensus 261 --~----~i~~~al~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~AP-E 293 (393)
T TIGR00069 261 --R----EIARKSLED-------------------------------------NG---AIILVDDLEEAIEISNDYAP-E 293 (393)
T ss_pred --H----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhCh-H
Confidence 1 222233321 11 23567999999999998421 2
Q ss_pred EEEEecCCHHHHHHHHHhc-cceEEEEcCcCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 368 AAGIMTKDLNVANTVSRSI-RAGIIWINCYFAF---------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 368 ~~~v~s~d~~~~~~~~~~l-~~g~v~vN~~~~~---------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
..-|.++|+ .++..++ ++|.|++..++.. +..+|. +|.+++.+.-+...|.++-++
T Consensus 294 HLel~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 294 HLELQTKNP---EELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred hheehhCCH---HHHHhhcCccceeccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 455777786 5566666 4899999887541 123444 456666666778888876554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.063 Score=53.74 Aligned_cols=344 Identities=20% Similarity=0.173 Sum_probs=182.2
Q ss_pred CHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh---hhhccHHH---------------HH
Q 013526 6 SRQHVRRLITVHG-HVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW---AKMGDIPG---------------AA 66 (441)
Q Consensus 6 ~~~~~~~a~~~~~-~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~---~~~~ev~~---------------~~ 66 (441)
+..+.++.+.... ....+-.+....+.+.++.+-|+=+...++..-+...+ ....|+.. +.
T Consensus 10 ~~~~~~~~l~r~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~ 89 (425)
T PRK00877 10 SDAEFRAALPRRAREDDEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREALEEAA 89 (425)
T ss_pred ChHHHHHHhcCccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3445555554443 33445556677777777777666555455544331100 01123322 23
Q ss_pred HHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCC-ccchH-hhHHHHHHHHhhCCeEEE--eCCCcchHHHH
Q 013526 67 NTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMIV--KPAEQTPLIAL 142 (441)
Q Consensus 67 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~AL~aGn~vv~--kps~~~~~~~~ 142 (441)
+.++.|.....+ ........+|......+.|+-.|.++.|. .+|+. +++...+||-.+|..=|+ .|+.... ...
T Consensus 90 ~~I~~Fh~~q~~-~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p 167 (425)
T PRK00877 90 ENIRAFHEAQKP-ESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGE-INP 167 (425)
T ss_pred HHHHHHHHHhCC-CCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCH
Confidence 333333322111 11112123566777899999999999995 33443 334468999999987554 4443111 222
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhh-cCCCceeeecCCCCceee
Q 013526 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSPLLI 217 (441)
Q Consensus 143 ~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~-~~~~~~~~e~gg~~~~iV 217 (441)
.+.-+...+|... +..-.|.....+|. +-|.||.|+=.|..-+.. ++...+ .-+.- -..|.+=+.|
T Consensus 168 ~vL~AA~~~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID---~~AGPSEvlV 238 (425)
T PRK00877 168 AILAAAALAGVDE----VYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVFGVVGID---MIAGPSEILV 238 (425)
T ss_pred HHHHHHHHcCCCe----eeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHcCCcCcC---CCCCCceeEE
Confidence 3333445666542 23222544444443 356899999888876543 222111 11111 1123333333
Q ss_pred --cCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHH
Q 013526 218 --FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293 (441)
Q Consensus 218 --~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 293 (441)
+++||.+..|..++.-+=+... .+.++|..+ ..++..+++.+++..+ | . .
T Consensus 239 iAD~~Anp~~vAaDLLaQAEHd~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l----~-----------r---~--- 292 (425)
T PRK00877 239 IADETADPDFVAADLLSQAEHDPD-----AQSILVTTSEELAEAVAAEVERQLATL----P-----------R---A--- 292 (425)
T ss_pred EeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhC----C-----------h---H---
Confidence 4568999999988865543332 445666555 2334444444443332 0 0 1
Q ss_pred HHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013526 294 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 373 (441)
Q Consensus 294 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s 373 (441)
+.++.++++ +| .|+.++|++||++++|..- .-..-|.+
T Consensus 293 -~ia~~sl~~-------------------------------------~g---~iivv~~leeai~~~N~~A-PEHLel~~ 330 (425)
T PRK00877 293 -EIARASLEG-------------------------------------QG---AIILVDDLEEAIELSNAYA-PEHLEIQT 330 (425)
T ss_pred -HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehh
Confidence 122222221 12 2356799999999999742 23456888
Q ss_pred CCHHHHHHHHHhc-cceEEEEcCcCCCC--CC--CCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 374 KDLNVANTVSRSI-RAGIIWINCYFAFD--SD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 374 ~d~~~~~~~~~~l-~~g~v~vN~~~~~~--~~--~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
+|+ ..+..++ ++|.|++..++... .+ -|-.=...+|..++.+.-+...|+++-++
T Consensus 331 ~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 331 EDP---RALLDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred CCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeE
Confidence 887 4556666 58999998765411 11 11111334567777777788888887554
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.078 Score=53.08 Aligned_cols=259 Identities=18% Similarity=0.166 Sum_probs=148.0
Q ss_pred cccccceeecccceEEEECCC-ccchHh-hHHHHHHHHhhCCeEEE--eCCCcchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013526 88 RALQGYTLREPIGVVGHIIPW-NFPTTM-FFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 163 (441)
Q Consensus 88 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~~-~~~~i~~AL~aGn~vv~--kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~ 163 (441)
.|......+.|+.-|.++.|. .+|+.+ .+...+||-.+|..=|+ -|+.........|+ ....+|..+ +..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 566677889999999999994 455543 34468999999987654 34432112233333 445566442 2322
Q ss_pred CchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCc--eeecCCCCHHHHHHHHHHHHhhc
Q 013526 164 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGILFN 237 (441)
Q Consensus 164 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~--~iV~~dad~~~aa~~i~~~~~~~ 237 (441)
.|.....+|. +-|.||.|+=.|..-+...=+...+ .-... -..|.+= +|-++++|.+..|..++.-+=+.
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g-~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG-RVGID---LFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-ccCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2444444443 3678999998888765432111111 11111 1123333 33355689999999888655433
Q ss_pred cCCCcccCceEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 238 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.. .+.++|..+ ..++..+++.+++..+ .. .+.++.++++
T Consensus 256 ~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l----------------~r------~~i~~~sl~~------------ 296 (426)
T PRK12447 256 PN-----SPAVLITTSRKLAEEVLAEIERLLAIL----------------PT------ADVASAAWRD------------ 296 (426)
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhC----------------CH------HHHHHHHHHh------------
Confidence 32 445666554 2344444444444332 00 1122222221
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceEEEEc
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 394 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~vN 394 (441)
+| .|+.++|++||++++|..-. -..-|.++|+ ..+..+++ +|.|++.
T Consensus 297 -------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG 344 (426)
T PRK12447 297 -------------------------YG---EVILCDDLEEMVAEADRYAS-EHVQVMTEDP---DWFLENMTNYGALFLG 344 (426)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCH---HHHHhhcCccceeccC
Confidence 11 23567999999999998421 3456888887 55666664 8999997
Q ss_pred CcCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 395 CYFAF---------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 395 ~~~~~---------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
.+... +..+|. +|.+++.+.-+...|.+.-++
T Consensus 345 ~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 345 ERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred CCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 76541 123444 566666666778888876554
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.11 Score=51.72 Aligned_cols=285 Identities=22% Similarity=0.211 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCCc-cchHhh-HHHHHHHHhhCCeEEE--eCCCcc
Q 013526 62 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN-FPTTMF-FMKVSPALAAGCTMIV--KPAEQT 137 (441)
Q Consensus 62 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n-~P~~~~-~~~i~~AL~aGn~vv~--kps~~~ 137 (441)
+..+.+.++.|.....+. ........|.....++.|+-.+.++.|.- +|+.+. +...+||-.+|+.=|+ .|+...
T Consensus 57 i~~A~~nI~~fh~~q~~~-~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~ 135 (390)
T cd06572 57 IELAAENIRAFHEAQLPK-DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKD 135 (390)
T ss_pred HHHHHHHHHHHHHHhCCC-CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCC
Confidence 444455555444432211 11222235778889999999999999954 555433 3468899999987654 444321
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----hCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCC
Q 013526 138 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 213 (441)
Q Consensus 138 ~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~ 213 (441)
-.....+.-....+|.. .+..-.|.....+|. +.|.+|.|+=.|..-+... +...... . -+=-..|.+
T Consensus 136 g~i~p~iL~aa~~~Gv~----eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~g~-V-~ID~~AGPS 207 (390)
T cd06572 136 GKINPAILAAAKLAGVD----EIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVSGD-V-GIDMPAGPS 207 (390)
T ss_pred CCCCHHHHHHHHHcCCc----EEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhcCC-c-CccCCCCCc
Confidence 11222222234555544 233222444444443 3688999988888765432 2221111 0 111112333
Q ss_pred c--eeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHH
Q 013526 214 P--LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 289 (441)
Q Consensus 214 ~--~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~ 289 (441)
= +|-+++||.+..+..++.-+=+.. ..+.++|..+ ..++..+.+.++++.+ | ..
T Consensus 208 EvlIiAD~~A~p~~vAaDLLaQAEH~~-----~a~aiLvT~s~~la~~V~~~v~~ql~~l----~-----------r~-- 265 (390)
T cd06572 208 EVLVIADETANPEFVAADLLSQAEHDP-----DSQAILVTTSEELAEAVEEEVERQLAEL----P-----------RR-- 265 (390)
T ss_pred eEEEEeCCCCCHHHHHHHHHhhhccCC-----CCeEEEEECCHHHHHHHHHHHHHHHHhC----C-----------cH--
Confidence 3 333556899999988886543322 2445566554 2344444444444332 0 00
Q ss_pred HHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEE
Q 013526 290 FDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369 (441)
Q Consensus 290 ~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 369 (441)
+ .++.+..+ + -.++.++|.+|+++++|..- .-..
T Consensus 266 -~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~A-PEHL 299 (390)
T cd06572 266 -E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYA-PEHL 299 (390)
T ss_pred -H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhc-hhhh
Confidence 0 11111111 1 13456799999999999742 2356
Q ss_pred EEecCCHHHHHHHHHhc-cceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 370 GIMTKDLNVANTVSRSI-RAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 370 ~v~s~d~~~~~~~~~~l-~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
-|.++|+. .+..++ ++|.|++..+.. .+..+|. +|..++.+.-+...|+++-++
T Consensus 300 el~~~~~~---~~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 300 ELQTEDPE---ELLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred eeHhcCHH---HHHhhCccceEEeecCCCchhhhccccCCCCccCC-----CcceeecCCCCHHHheeccee
Confidence 77888873 466666 489999988654 1233454 456666666677788876554
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.13 Score=50.42 Aligned_cols=272 Identities=19% Similarity=0.148 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH
Q 013526 62 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141 (441)
Q Consensus 62 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~ 141 (441)
+..+.+.++.+.....+.. .... .+|.....++.|+-.+.++.|.-+|- +.+...+||-.+|..=|+--+|-.....
T Consensus 59 i~~a~~~I~~fh~~q~~~~-~~~~-~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p 135 (368)
T PRK13769 59 ALEAAKSLEALYSRLKPPE-AVDF-YGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTG 135 (368)
T ss_pred HHHHHHHHHHHHHHhCCCC-eEec-CCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCH
Confidence 3444455555544322211 1111 35667788899999999999965553 3444689999999876654332211222
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCC
Q 013526 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 221 (441)
Q Consensus 142 ~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~da 221 (441)
..|+ ....+|.. .+..-.|.....++...-++|.|+=.|..-+...=+...+ .-+.. +-.|-.--+|+-+++
T Consensus 136 ~vL~-aa~~~Gv~----eIy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g-~V~ID--~~AGPSEvlViAD~a 207 (368)
T PRK13769 136 ELLA-VAKELGVK----GVLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ-YVGID--GIEGPTELVVYAEGV 207 (368)
T ss_pred HHHH-HHHHcCCC----eeecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhC-CcCCC--CcCCCcceEEEcCCC
Confidence 3333 44556654 2332224444455555557888888888765432111111 11111 112333345555568
Q ss_pred CHHHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Q 013526 222 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 301 (441)
Q Consensus 222 d~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 301 (441)
|.+..|.+++.-+=+.. ..+.++|..+ .++.+++.+++.+. +...
T Consensus 208 ~p~~vAaDLLaQAEH~~-----~a~~iLvT~s--~~la~~V~~~v~~~---------------------------~~~~- 252 (368)
T PRK13769 208 PPEVAVRGALAQLEHGP-----TSFAYLLSTD--AELLKAAEEIYRRE---------------------------RTSS- 252 (368)
T ss_pred CHHHHHHHHHHHhhcCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------HHhc-
Confidence 88888877775443222 2445566555 45555555544331 0000
Q ss_pred HcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcC-CCCcEEEEecCCHHHHH
Q 013526 302 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT-RYGLAAGIMTKDLNVAN 380 (441)
Q Consensus 302 ~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~v~s~d~~~~~ 380 (441)
.| - ..|+.++|++|+++++|.. +-.|.. .+.+
T Consensus 253 -~~--------------------------------------~-~~iivv~~leeai~~~N~~APEHLel--~~~~----- 285 (368)
T PRK13769 253 -MG--------------------------------------P-LEVRKVAGVEEAVRFIDEIAPEHLEV--WGRR----- 285 (368)
T ss_pred -CC--------------------------------------C-CeEEEECCHHHHHHHHHhhChHheEe--eCcH-----
Confidence 00 0 2467789999999999984 333444 3322
Q ss_pred HHHHhc-cceEEEEcCcCCC-------CCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 381 TVSRSI-RAGIIWINCYFAF-------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 381 ~~~~~l-~~g~v~vN~~~~~-------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
.+..++ ++|.|+++.+... +..+|. +|.+++.|.-+...|+++-++
T Consensus 286 ~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 286 EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT-----GGTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred HHHhhCCccCChhcCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHcccceeE
Confidence 255566 4899999554321 123444 455666666677777776554
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0022 Score=73.11 Aligned_cols=106 Identities=15% Similarity=0.084 Sum_probs=79.0
Q ss_pred ceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEE
Q 013526 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 161 (441)
Q Consensus 82 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~ 161 (441)
..+|.++|+.+.....|+|+|+|+.+.. ...+.+++.+|++||.+|+..++.. ...+ +++|+.+.+.+
T Consensus 1171 ~~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~~~------~~Lp~~v~~~v 1238 (1318)
T PRK11809 1171 RLLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RALV------AALPAAVQARI 1238 (1318)
T ss_pred ccCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HHHH------HhccHHHHhHh
Confidence 3578889999999999999999998833 3678899999999999888644432 2222 45888877765
Q ss_pred eCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCC
Q 013526 162 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203 (441)
Q Consensus 162 ~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~ 203 (441)
... .........++.|.|.|..+..+.+.++++++.+.
T Consensus 1239 ~~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~Ga 1276 (1318)
T PRK11809 1239 QLA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGP 1276 (1318)
T ss_pred hhc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCC
Confidence 321 11222335689999999999999999999855543
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.38 E-value=1.9 Score=44.41 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=74.8
Q ss_pred eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEe
Q 013526 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 162 (441)
Q Consensus 83 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~ 162 (441)
.++.++|+.+.....|.|-|+++.+ +....+.+++.+|++||.+++.+.......... +|..+-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~~---------l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAALLKD---------LPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHHHHh---------chhhhhhhee
Confidence 4667789999999999999999866 667888899999999999999776533222222 4443322221
Q ss_pred CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeec
Q 013526 163 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 209 (441)
Q Consensus 163 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~ 209 (441)
-.++. ...-.++.+.|.|.++..+.+.+..+ ....|++...
T Consensus 696 ~~~~~-----~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~ 736 (769)
T COG4230 696 VAKDW-----TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQ 736 (769)
T ss_pred eccch-----hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEee
Confidence 11111 22234889999999999999998777 3434544443
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.15 E-value=0.12 Score=52.34 Aligned_cols=111 Identities=12% Similarity=0.012 Sum_probs=85.9
Q ss_pred cCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceE---EEEEeCCHHHHHHHHh
Q 013526 285 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM---ALMKFKTVEEAIKSAN 361 (441)
Q Consensus 285 ~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl---~v~~~~~~~eai~~~n 361 (441)
.+..++.++++.+.++++++..++...+..+ .|-.+.++...|++...++++ .|++.. ......+..+.+.+.+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d-~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVLD-NGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhcccc-cCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 4677888999999999999988888888764 788888898778888777765 444433 2334455667788888
Q ss_pred cCCCC--cEEEEec-CCHHHHHHHHHhccceEEEEcCcCC
Q 013526 362 NTRYG--LAAGIMT-KDLNVANTVSRSIRAGIIWINCYFA 398 (441)
Q Consensus 362 ~~~~g--l~~~v~s-~d~~~~~~~~~~l~~g~v~vN~~~~ 398 (441)
..+.| ...+.|. .=.-.+-+++-.|.+|+++||-+..
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 89999 6667776 4445678899999999999999865
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 441 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-123 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-118 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-116 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-116 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-116 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-116 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-116 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-115 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-115 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-115 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-114 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-113 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-112 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 5e-92 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-91 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 3e-91 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 7e-91 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 8e-91 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 6e-90 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-89 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 6e-87 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-86 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-86 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 6e-86 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-85 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-85 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-84 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-84 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-81 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 8e-81 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 4e-78 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 5e-78 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-76 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-75 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-73 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-73 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 9e-73 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 4e-72 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-69 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 3e-68 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 5e-68 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-65 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 5e-64 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 8e-63 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 5e-62 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-61 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-59 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-59 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 9e-59 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-58 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-54 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-51 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-51 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 6e-49 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-48 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-48 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-48 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-47 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-47 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 3e-47 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 8e-47 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-46 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 5e-45 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-44 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-44 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 9e-43 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 7e-41 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-39 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 3e-38 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 3e-37 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 3e-37 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 5e-37 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-35 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-35 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-35 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 3e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-34 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-33 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-30 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 6e-28 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-27 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-23 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-23 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-23 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-22 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 4e-15 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 5e-15 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 5e-15 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 5e-15 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-13 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 2e-06 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-05 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-04 | ||
| 3k9d_A | 464 | Crystal Structure Of Probable Aldehyde Dehydrogenas | 8e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From Listeria Monocytogenes Egd-E Length = 464 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 441 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-180 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-168 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-162 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-156 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-152 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-148 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-148 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-146 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-146 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-145 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-144 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-144 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-144 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-142 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-126 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-113 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-113 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-105 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 2e-97 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 4e-94 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-90 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 3e-82 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 4e-69 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 4e-61 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 747 bits (1931), Expect = 0.0
Identities = 225/412 (54%), Positives = 303/412 (73%), Gaps = 1/412 (0%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 MGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 746 bits (1929), Expect = 0.0
Identities = 219/412 (53%), Positives = 286/412 (69%), Gaps = 1/412 (0%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ + ADLIE LA LE LD GK + + + D+ LRYYAG ADK HG+
Sbjct: 84 RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT 143
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT EP+GV G IIPWNFP M K+ PALA G +++K AEQTPL ALY
Sbjct: 144 IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALY 203
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK
Sbjct: 204 VANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLK 263
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE IYDEF ++ V
Sbjct: 264 RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSV 323
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 323
+AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG +GY+I+P
Sbjct: 324 ARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQP 383
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S
Sbjct: 384 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V +
Sbjct: 444 QALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 739 bits (1911), Expect = 0.0
Identities = 178/414 (42%), Positives = 274/414 (66%), Gaps = 7/414 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG ++ + AD++E+H E LA +EALDAG +++ A + + T RY+AG DKI G
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 84 LKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
+ +++A T +EP+GV G +IPWN+P M K + LAAG T+++KPA+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++ A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E I+++F
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
+K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+ GG + + G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLN 377
+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G+ T+D+N
Sbjct: 400 FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+V
Sbjct: 460 KALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 725 bits (1875), Expect = 0.0
Identities = 171/421 (40%), Positives = 245/421 (58%), Gaps = 6/421 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R +M K ADLI E LA++E+L+ GK + A+ G+I A+ Y AG A + G+
Sbjct: 87 RSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQT 145
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T ++
Sbjct: 146 HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSI 205
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA +
Sbjct: 206 RLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA-RTV 264
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K V LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D ++L
Sbjct: 265 KRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERL 324
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYI 321
++ ++ GDP + + G + + +++ SY+ G GA LL GG+ IG + G Y
Sbjct: 325 LDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYY 384
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+F VT DM IA+ EIFGPV++ + FKT +EA+ AN T +GL+A + + +L A
Sbjct: 385 APTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQ 444
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI-FNSPW 440
R IRAG WIN + P GGYK SG GR+ G Y Q K V + +PW
Sbjct: 445 TIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPW 504
Query: 441 L 441
Sbjct: 505 F 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 722 bits (1867), Expect = 0.0
Identities = 188/423 (44%), Positives = 257/423 (60%), Gaps = 9/423 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R + A + E LA LE++D GK A DI A YYA A+K+
Sbjct: 74 RARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQ 132
Query: 84 LKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
+ LREPIGVVG I PWN+P M KV+PALAAGC I+KP+E L
Sbjct: 133 KAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASL 192
Query: 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
L + K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+ G ++M AAA
Sbjct: 193 TCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA- 251
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
+KPVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+ + E I EF
Sbjct: 252 QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFL 311
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KK 317
++V+ K + DP + R GP V + Q+++IL ++ + K EGAT+LTGG KK
Sbjct: 312 NRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKK 371
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
G++IEPTI T+VT +M I + E+FGPV+ + F T EEAI AN+T YGL A +++ DL
Sbjct: 372 GFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLE 431
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 437
V+++ +AGI+W+NC + P+GG K SGFGR+ G L NYL VK V I
Sbjct: 432 RCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISE 491
Query: 438 SPW 440
PW
Sbjct: 492 EPW 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 721 bits (1864), Expect = 0.0
Identities = 165/422 (39%), Positives = 246/422 (58%), Gaps = 8/422 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG + AD I+EH E LA LE LD GK + D+ N Y+AG ADK GE+
Sbjct: 96 RGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEM 154
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+ + ++EP+GVV I PWN+P K++PALA GC++++KP+E TPL +
Sbjct: 155 IDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTI 214
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
L + G P G +N++ G G G ++ H ++D VSFTG + G+ +M+ AA +N+
Sbjct: 215 RVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNV 273
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
++LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ I D+FE+ L
Sbjct: 274 TNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQAL 333
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKG 318
+++ K +G+ FD GP + + ++I SY++ K EGAT+ GGK K G
Sbjct: 334 IDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDG 393
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
+ EPT+ TN M I + E+FGPV+ + F+T +EAI+ AN++ YGLA + +KD+
Sbjct: 394 LFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGK 453
Query: 379 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438
A V+ ++ G +WIN + + + P+GGYK SG GR+ G E L YL K ++T
Sbjct: 454 AQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQ 513
Query: 439 PW 440
Sbjct: 514 LV 515
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 718 bits (1856), Expect = 0.0
Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 10/423 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGE 82
RG I+ + AD++ E + L+ LE LD GK + D A+ ++ G A ++G+
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+ + YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A + AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHL 252
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K V++ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F + L
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGY 319
+ +A ++GDP D A GP V K Q +++LSYIE GK EGATL+TGG + +G
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA 372
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
Y++PT+F +VT+DM IA+ EIFGPVM ++ F +E + AN T +GLA G+ T DL A
Sbjct: 373 YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARA 432
Query: 380 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV--TPIFN 437
+ V + AG +WIN Y + P+GG K SGFGR+ +L +Y ++K+V T +
Sbjct: 433 HRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVD 492
Query: 438 SPW 440
+P+
Sbjct: 493 APY 495
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 717 bits (1854), Expect = 0.0
Identities = 167/424 (39%), Positives = 258/424 (60%), Gaps = 12/424 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R +ML+ A +I E + +A LE ++ GK + A+ DI A + YYAG A + G+
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQH 140
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+++ YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ +
Sbjct: 141 IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +K
Sbjct: 201 LAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVK 258
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++V
Sbjct: 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KK 317
++ KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K
Sbjct: 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKN 378
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
GY++ P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI-- 435
A+ V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+ +
Sbjct: 439 RAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGD 498
Query: 436 FNSP 439
+S
Sbjct: 499 VDSL 502
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 702 bits (1814), Expect = 0.0
Identities = 170/421 (40%), Positives = 250/421 (59%), Gaps = 13/421 (3%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGE 82
R +L+ A+LIE+HA+ LAV+E LDAG++ + + AA +YA A+ +
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR 146
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+ R YT+R P G VG I PWN P + +++PALA G T+++KPAE +P A
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A + K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+ AA +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K +S ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+++F K+
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------- 315
VE+A+A VG P DP GP + + R+L Y+E GKREGA LL GG+
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGED 385
Query: 316 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 374
+G Y+ PT+F M IA+ EIFGPV+ + FK EEA++ AN+T+YGLAA + T+
Sbjct: 386 LSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444
Query: 375 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434
DL A+ ++ + AG++++N + P+GG K SG R+ G +L Y +K++ P
Sbjct: 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALP 504
Query: 435 I 435
+
Sbjct: 505 L 505
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 691 bits (1787), Expect = 0.0
Identities = 150/410 (36%), Positives = 227/410 (55%), Gaps = 5/410 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R +LK AD+IEE+ +V A LE+ + GK A +IP + R++AGAA ++G
Sbjct: 84 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA 143
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL
Sbjct: 144 AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A LAK P GV+N++ G G T G + H + VS TGS G ++ A S++
Sbjct: 204 KLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSI 261
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K +ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD +KL
Sbjct: 262 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 321
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYI 321
G P D + GP +R+ +E K G ++TGG+ GYY
Sbjct: 322 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYY 381
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+
Sbjct: 382 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 441
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
VS ++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V
Sbjct: 442 VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 685 bits (1771), Expect = 0.0
Identities = 139/410 (33%), Positives = 229/410 (55%), Gaps = 5/410 (1%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R +LK AD IE+ A+ A LEAL+ GK + K ++P + R++AGA +H
Sbjct: 86 RSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA 145
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
R+PIG+VG I PWN+P M K++PA+ G T++ KP+EQTPL AL
Sbjct: 146 AGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A L +P+GV+NV+ G G T G A+ +H + VS TG G++V+ AAA +
Sbjct: 206 KLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA-KTV 263
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K LELGGK+P++++ D D+ + +N G+ C A+ R+Y + GIY++ L
Sbjct: 264 KRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADL 323
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYI 321
D GP + ++Q DR+ S++E + + TGG+ +G++
Sbjct: 324 TSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFF 383
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
+PT+ T++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ + TKD++ A
Sbjct: 384 QPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMR 443
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ ++ G WIN +F ++ P+GG K SG+G+D + +L +Y V+ +
Sbjct: 444 AASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 638 bits (1647), Expect = 0.0
Identities = 165/416 (39%), Positives = 239/416 (57%), Gaps = 5/416 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ ++ E ++ L A + G+ + + G+ + Y+AGAADK+ +
Sbjct: 75 VIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT 134
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA +TPL A A
Sbjct: 135 GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAE 194
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V + AA LKP +
Sbjct: 195 VFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA-EMLKPCT 252
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKS +I +DVD+ A M + + N G+ CV +R+ YDE +
Sbjct: 253 LELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFV 312
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPT 324
A VG P DPA + GP + +KQ R+ YI G EGA L+ GG G++I+PT
Sbjct: 313 TALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPT 372
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+F +V M IA+ EIFGPV+A++ + T E+AI AN++ YGLA + T D+ +S+
Sbjct: 373 VFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQ 432
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 440
IR G IN Y AFD P+GGYK SG GR+ G E + ++ Q KSV+ P+ +
Sbjct: 433 QIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVA 487
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 624 bits (1612), Expect = 0.0
Identities = 142/417 (34%), Positives = 220/417 (52%), Gaps = 12/417 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R I++K A +I + +AGK A D A + L YYA +++
Sbjct: 98 RANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGK 156
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+SR Q P+GV I PWNF + + G T+++KPA TP++A
Sbjct: 157 EILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT--- 199
F + + AG+P GV+N VPG G G + H ++FTGS DVG ++ + AA
Sbjct: 217 KFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRP 276
Query: 200 --SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 257
++LK V +E+GGK +++ D D++ AA+ L+ G+ C A SR + + +YDE
Sbjct: 277 GQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDE 336
Query: 258 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 317
+K V AK VGDP + GP +D+K F++I+SYIE GK+EG L+TGG+
Sbjct: 337 VLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSST 395
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
G++I+PTI ++ + +I + EIFGPV+A K + A++ ANNT YGL ++T++
Sbjct: 396 GFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455
Query: 378 VANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 431
R G ++ N C A P+GG+KMSG + G + L ++Q K+V
Sbjct: 456 HIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 620 bits (1601), Expect = 0.0
Identities = 158/409 (38%), Positives = 226/409 (55%), Gaps = 9/409 (2%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K E + + + G S ++ N A D E
Sbjct: 72 LLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFE---- 127
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
R ++E IGV G I PWNFPT +K++ A AAG +++KP+E+TP A+ A
Sbjct: 128 ERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAE 187
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ GVP GV N+V G G G ++ H + +SFTGS G ++M+ AA + K VS
Sbjct: 188 IFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA-KDFKKVS 246
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I D F +L E+
Sbjct: 247 LELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQF 306
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKGYYIEP 323
VG+P + + GP + KKQFD++ +YI G EGA L GG KP G +KGY+ P
Sbjct: 307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARP 366
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
TIF NV M IA+ EIFGPVM+++ + ++EAI+ AN+T+YGLA ++ KD + V+
Sbjct: 367 TIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVA 426
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
RSI AG + IN D P+GGYK SG GR+ G + +L+VKS+
Sbjct: 427 RSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 617 bits (1594), Expect = 0.0
Identities = 141/408 (34%), Positives = 228/408 (55%), Gaps = 6/408 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ K ++ E+ + +A +++ G A ++ +R + A + + +
Sbjct: 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI 149
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E PL A+ FA
Sbjct: 150 EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAE 209
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A+ + LK V
Sbjct: 210 ILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS-NTLKRVC 268
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+ K + A
Sbjct: 269 LELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIA 327
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKGYYIEP 323
+ VG GP V K+Q+D+I I+ G EGATL+TGG P+G ++GYY+ P
Sbjct: 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRP 387
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F +V M I + EIFGPV++L+ F T +EA+ AN+T YGL I ++D + ++
Sbjct: 388 TVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIA 447
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R+G++ +N + +GG K SG R+ GL + +L K++
Sbjct: 448 AQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 576 bits (1486), Expect = 0.0
Identities = 132/418 (31%), Positives = 217/418 (51%), Gaps = 14/418 (3%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R ++LK A L+ L + GK A D+ A + + YYA AA +
Sbjct: 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPA 156
Query: 84 LKMSRA--LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+++ + P+G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA--- 198
+ AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 199 --TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 256
+ K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G Y+
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 257 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 316
++++++A+ VG P + GP V +Q ++LSYIE GK EG L+ GGK +
Sbjct: 337 PVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLEG 394
Query: 317 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 376
+GY+I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 395 EGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKR 454
Query: 377 NVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSV 431
R G ++ N A P+GG+K+SG G L+ L +L++K+V
Sbjct: 455 EHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 557 bits (1438), Expect = 0.0
Identities = 139/411 (33%), Positives = 218/411 (53%), Gaps = 8/411 (1%)
Query: 25 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL 84
I+ + A+L+EEH E + ++G S A +I A N + A ++HG +
Sbjct: 75 SAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHGRIS 133
Query: 85 KMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + R GVVG I PWNFP + V+PALA G +++KPA TP+
Sbjct: 134 PSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV 193
Query: 144 -FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-N 201
A + + AGVP GV++ V G G G +H +SFTGST VGR+V + A
Sbjct: 194 IPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGP 253
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V ++DEF +K
Sbjct: 254 MKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEK 313
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
VE K GDP GP ++ Q + IE K+EGAT+ G +G +
Sbjct: 314 FVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLV 370
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
P +F++VT DM IA+ EIFGP+++++K A + AN + +GL+A + +KD++ A
Sbjct: 371 HPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQ 430
Query: 382 VSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ I +G++ IN D +GG K SG GR G ++ + + +
Sbjct: 431 FALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 16/415 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K AD+IE + +V A + ++AGK S A G++ A + LR KI G+ +
Sbjct: 82 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 87 SRALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
AG P + ++ G I + + VSFTGST+VG +V++
Sbjct: 201 AMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVGERVVKVGG--- 256
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K +ELGG P ++ +D D++ AAD GI G+ C A V + +Y + ++
Sbjct: 257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 316
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
+ ++ + VGDP DP V GP + D +++ IE +G +L GG+ +G Y+
Sbjct: 317 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYV 374
Query: 322 EPTIF---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
+PT + +DM++ K E+F PV ++ K +++AI+ AN YGL A + +D+
Sbjct: 375 QPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 379 ANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
R + G I+IN P+GG K SG R+ ++ K++V
Sbjct: 435 IRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 521 bits (1345), Expect = 0.0
Identities = 136/413 (32%), Positives = 206/413 (49%), Gaps = 15/413 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ +ADL+EE E++ L + K A G++ A+ +R+ A A +++GE LK
Sbjct: 76 LLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKG 134
Query: 87 SRALQG------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
+ G REP+GVV I P+N+P + K++PAL G T++ KPA Q L
Sbjct: 135 DQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
+ AG P+G++ VV G G G + H ID ++FTG T G ++ + A
Sbjct: 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--- 251
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
+ PV LELGGK P ++ DD D+ A + G G+ C A RV+VQ+ + D+
Sbjct: 252 KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVA 311
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
+ E + VG P D P +D+K I I+ GATLL+G K +G
Sbjct: 312 NIKELVEQLTVGSPEDD-ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNL 367
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
+ PT+ +VT M +A E FGPV+ +++ K EAI +N + YGL A I TKD + A
Sbjct: 368 LSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAI 427
Query: 381 TVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+ + + G + IN D P+ G K SG G SL + + + V
Sbjct: 428 NIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 520 bits (1341), Expect = 0.0
Identities = 113/422 (26%), Positives = 183/422 (43%), Gaps = 12/422 (2%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ +FA ++ A+ LA + + GK + ++ N + A + GE
Sbjct: 69 LLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP 127
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
+P GVV P+NFP + + PAL AG ++ KP+E TP +A
Sbjct: 128 LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLK 187
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
AG+P GVLN+V G G G A+A+H +D + FTGS+ G + K ++
Sbjct: 188 AWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILA 246
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEK 265
LE+GG +PL++ + D++ A + + G+ C + R+ V +G + D +LV
Sbjct: 247 LEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306
Query: 266 AKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 324
+ VG PA G + + +L EH +GA L + P
Sbjct: 307 SATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPG 366
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
I +V+ E FGP++ ++++ AI+ AN T+YGLAAG+++
Sbjct: 367 IL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLV 425
Query: 385 SIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNY------LQVKSVVTPIFN 437
RAGI+ N S P+GG SG R + L+ SV P
Sbjct: 426 ESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASLESPSVSLPATL 485
Query: 438 SP 439
+P
Sbjct: 486 TP 487
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 15/411 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I++ A I+E E LA + A+DAGK A+ ++ + T + A + EV+
Sbjct: 61 ILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL+ + A
Sbjct: 120 DDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAK 178
Query: 147 LAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
+ + A VP GV N++ G G G I + ++ +SFTGS+ VG + + A
Sbjct: 179 IIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---F 235
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K ++LELGG +P ++ D D+N A + + G G++C++ + V E I D+F +
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF 295
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
V KAK VG+P D GP + + + + +E EG LL GGK
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFY 352
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTI V D ++ K E F PV+ +++ EE I AN+T YGL + I T D+N +
Sbjct: 353 PTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF 410
Query: 383 SRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+ ++ G + IN F D P+GG K SG GR+ ++ +K+++
Sbjct: 411 AENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 513 bits (1323), Expect = e-180
Identities = 89/452 (19%), Positives = 162/452 (35%), Gaps = 49/452 (10%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R L L++ + ++G + + DI G TL YYA +
Sbjct: 68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVH 126
Query: 84 LKMSRALQG----------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 133
+ + + L GV I +NFP+ + K +PAL +G +IVKP
Sbjct: 127 ALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP 186
Query: 134 AEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
A T + AG+ P G L+++ G ++ + D VSFTGS D
Sbjct: 187 ATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADTAAT 243
Query: 193 VMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNT-----AADMALLGILFNKGEICVASS 246
+ A ++++ + ++ D +T + + G+ C A
Sbjct: 244 LRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 303
Query: 247 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 306
R +V E + + L K VG+P + AVR G V ++Q++ +L+ I + E
Sbjct: 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 363
Query: 307 LLTGGK-----PIGKKGYYIEPTIF--TNVTEDMLIAKNEIFGPVMALMKFKTV------ 353
+ P +F + L+ E+FGPV ++ ++
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423
Query: 354 --EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD--------- 402
A+ A + L A I + D ++ + ++
Sbjct: 424 PEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVM 483
Query: 403 --CPYGGYKMSGFGRDC-GLESLHNYLQVKSV 431
+GG +G G + GL +L Y + ++
Sbjct: 484 PMSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-168
Identities = 133/413 (32%), Positives = 201/413 (48%), Gaps = 15/413 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ K AD++ E + + + + K + A ++ A + Y A ++ GEVL+
Sbjct: 67 YLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEG 125
Query: 87 SRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
REP+G+V I P+N+P + K++PAL AG + KP Q +
Sbjct: 126 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 185
Query: 141 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 200
L A AG+P GV N + G G G I H ++ ++FTGST +G ++ + A
Sbjct: 186 GLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG-- 243
Query: 201 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 260
++P+ LELGGK ++ +D D+ A + G G+ C A RV V E + DE +
Sbjct: 244 -MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE 302
Query: 261 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 320
K+ EK A +G+P D P +D K D + I +GAT LT K +G
Sbjct: 303 KIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNL 358
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
I P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I T D A
Sbjct: 359 ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAF 418
Query: 381 TVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++ + G + IN +D P+ G K SG G S+ VKSVV
Sbjct: 419 GIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 464 bits (1197), Expect = e-162
Identities = 143/410 (34%), Positives = 222/410 (54%), Gaps = 5/410 (1%)
Query: 25 RGIML-KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
R L K + I E A ++ L + GK+ A+ ++ A+ + Y A A + GE+
Sbjct: 68 RASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEI 126
Query: 84 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
++ R + +GV I+PWNFP + K++PAL G T+++KP+E TP A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
FA + G+P GV N+V G G T G +A + + VS TGS G ++M AA N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA-KNI 245
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +L
Sbjct: 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 263 VEKAKAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
E +A G+P + + GP ++ +R+ + EGA + GGK + KGYY
Sbjct: 306 GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYY 365
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
PT+ +V ++M I E FGPV+ ++ F T+E+AI AN++ YGL + I T++LNVA
Sbjct: 366 PPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ ++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 426 AIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 450 bits (1161), Expect = e-156
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 9/413 (2%)
Query: 23 EPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG- 81
+ + ++ K + E+ + + ++ A + G + ++ L ++ G
Sbjct: 67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGV 125
Query: 82 EVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 140
+ + R P+GV+ I P+NFP + ++PA+A G +++ KP QT +
Sbjct: 126 KEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAIS 185
Query: 141 A-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 199
A + AG+P GVLNV+ G + ++ +SFTGST VGR + + A
Sbjct: 186 GGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG- 244
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
K ++LELGG +P + D DV+ A D A+ G ++G+IC+ +R+ V + +YDEF
Sbjct: 245 RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFV 304
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
+K + K GD DP GP ++++Q ++ L IE K +G L GK G
Sbjct: 305 EKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGN 361
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
+ P +F + IA+ E+F P+ ++K + +EAI AN+T YGL++ + T DL
Sbjct: 362 VLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKG 421
Query: 380 NTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ I +G+ +N DS + +GG K SG GR + + K +
Sbjct: 422 EKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 456 bits (1176), Expect = e-152
Identities = 136/415 (32%), Positives = 209/415 (50%), Gaps = 13/415 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLK 85
+LK A + L+ + L+ GK W + D+ A + L YYA ++
Sbjct: 595 YLLKAAQAARKRLFELSAWQVLEIGK--QWDQAYADVTEAIDFLEYYAREMIRLGQPQRV 652
Query: 86 MSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
+ + EP GV I PWNFP + S A+ G ++ KP+ T +I +
Sbjct: 653 GHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHL 712
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT----- 199
L + AG+P+GV N PG G G + H DI ++FTGS + G ++++ AA
Sbjct: 713 VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQ 772
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
+N+K + E+GGK+ ++I DD D++ A L +G+ C A SRV V + +YD+F
Sbjct: 773 ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFI 832
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
++LV AKA VG DPA G D K I Y E GKREG L P +GY
Sbjct: 833 ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-AGEGY 891
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
++ TI + + IA+ EIFGPV+A+M+ K ++AI+ AN+T++ L GI ++
Sbjct: 892 FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHL 951
Query: 380 NTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 431
R R G ++IN A P+GG +MSG G + G + L +++ + V
Sbjct: 952 AKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 430 bits (1109), Expect = e-148
Identities = 121/416 (29%), Positives = 201/416 (48%), Gaps = 12/416 (2%)
Query: 25 RG-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG I+ + D + E +VL L +L+ GK+ G++ + Y G + I G +
Sbjct: 83 RGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPI 141
Query: 84 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
L R+ P+G+VG I +NFP ++ + A+ G + K A T LI++
Sbjct: 142 LPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201
Query: 143 YFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198
+ + +P + ++ G G G A+A ++ +SFTGST VG+QV
Sbjct: 202 AVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
LELGG + ++ F+D D++ AL + G+ C + R+++ E I+DE
Sbjct: 261 -ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEV 319
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 318
+L + VG+P+DP V GP K+ L +E K+EG T++ GGK + + G
Sbjct: 320 VNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPG 379
Query: 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 378
Y+EPTI T + D IA E F P++ + KF+ EE N + GL++ I TKDL
Sbjct: 380 NYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGR 439
Query: 379 ANTV--SRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ GI+ +N + + +GG K +G GR+ G ++ Y++ +
Sbjct: 440 IFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 429 bits (1106), Expect = e-148
Identities = 141/410 (34%), Positives = 223/410 (54%), Gaps = 7/410 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ FA+ I E+ +LA + + GKL S A+ ++ A + Y A I G++L
Sbjct: 77 MLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPS 135
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ Y + P GVV I WNFP + K+ PAL G TM++KP ++TPL
Sbjct: 136 DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELG 195
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
+AK AG+PDGVLNV+ G G G + ++ TGST G+Q+ + +A + PV
Sbjct: 196 RIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYMTPV 254
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
LELGGK+P+++ DD D++ AA+ AL G N G++C R+YV +YDEF K +
Sbjct: 255 MLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPL 314
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYI 321
K VGDP D + GP+ ++++ D I + ++GAT+ TGGK + G +
Sbjct: 315 VKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY 374
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPT+ +V +D ++ E FGP++ ++K ++E+AI+ N++ YGL+A + T+ N
Sbjct: 375 EPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQ 434
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ G ++IN + G+K SGFG + G L YL+ K+V
Sbjct: 435 AISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 424 bits (1092), Expect = e-146
Identities = 159/406 (39%), Positives = 240/406 (59%), Gaps = 3/406 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ + +L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+ +
Sbjct: 74 ILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPG 132
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL A
Sbjct: 133 HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALA 192
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++K V
Sbjct: 193 ELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKV 251
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
SLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL +
Sbjct: 252 SLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQA 311
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
+GD D V GP +D+K ++ +I +GA ++ GGK + G + +PTI
Sbjct: 312 MSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTI 371
Query: 326 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385
+V + ++K E FGP+ L +FK + I AN+T +GLAA +DL+ V +
Sbjct: 372 LVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEA 431
Query: 386 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ GI+ IN + P+GG K SG GR+ + +YL++K +
Sbjct: 432 LEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 477
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 424 bits (1092), Expect = e-146
Identities = 152/410 (37%), Positives = 236/410 (57%), Gaps = 3/410 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ ++ DL+ +++ LA++ + GK + AK G+I AA+ + ++A ++ G+ L
Sbjct: 77 ILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPT 135
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
A + ++EPIGV I PWNFP M KV PALAAGC ++VKPAE TP AL A
Sbjct: 136 PDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMA 195
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA+ AGVP GVL+VV G G I S+ + K+SFTGST VGR +M +A +K +
Sbjct: 196 FLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA-PTVKKL 254
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+LELGG +P ++FDD D++ A + A+ N G+ CV ++R +V E +YD F KL
Sbjct: 255 TLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAA 314
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
VG + GP +++ ++ S+I +GA+L+TGGK + EPT+
Sbjct: 315 VSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTV 374
Query: 326 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385
T V DM +AK E FGP+ L +F + EE ++ AN+T +GLAA + ++D+ V+ +
Sbjct: 375 LTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEA 434
Query: 386 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+ G++ IN + P+GG K SG GR+ + +Y+ +K + +
Sbjct: 435 LEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 422 bits (1087), Expect = e-145
Identities = 165/406 (40%), Positives = 249/406 (61%), Gaps = 5/406 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ K+ DLI +A+ +A++ + GK + A+ G++ AA+ + ++A A +++G+ +
Sbjct: 97 ILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPA 155
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ + +R+P+GV I PWNFP M K +PALAAGCTMIV+PA+ TPL AL
Sbjct: 156 PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALG 215
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LA+ AG+P GVL +V G GA + S+ + K+SFTGST+VGR +M A +K +
Sbjct: 216 VLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA-PTIKRI 274
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+YVQ G+YD+F +KL K
Sbjct: 275 SLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAK 334
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 325
K VG+ +P V GP +++K ++ ++IE +GA L+TGGK +G G + EP I
Sbjct: 335 VKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGI 392
Query: 326 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 385
T VT DML+AK E FGP+ L F T EE I AN+T +GLAA T++ + A VS +
Sbjct: 393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEA 452
Query: 386 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ G++ N + P+GG K SG GR+ + YL+ K +
Sbjct: 453 LEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYI 498
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-144
Identities = 133/407 (32%), Positives = 219/407 (53%), Gaps = 4/407 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ D ++E+ E + + ++ GK A+ G++ AA Y A + +
Sbjct: 76 WLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPE 134
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
P+GV G I+PWNFP M K+S ALAAGC ++KPA +TPL + F
Sbjct: 135 KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFF 194
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
+ +PDG++N+V G G + H D+ +SFTGST+VGR+++ A +K +
Sbjct: 195 SVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA-EQVKKL 253
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+LELGG +P ++FDD D+ AAD + G+ CV ++R++V E + D F +KL E+
Sbjct: 254 ALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAER 313
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPT 324
VGD + + GP ++K+ FD++ +++ +GA+L+ G +P G + PT
Sbjct: 314 VNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPT 373
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+ V +M + E FGP++ + F+T EE I + N+T +GLA+ + T D A V+
Sbjct: 374 VVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAA 433
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+R G + N + P+GG K SG GR+ GLE L +++ ++V
Sbjct: 434 GLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTV 480
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-144
Identities = 113/407 (27%), Positives = 187/407 (45%), Gaps = 3/407 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I+ A+ ++EH + LA + L+ GKL S +K ++ + YYA ++
Sbjct: 53 ILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLN 111
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
S Y L++ GV+ PWNFP +P G +++K A P A A
Sbjct: 112 SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAK 171
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ K AG P+G L + IA I V+ TGS G V +AA NLK +
Sbjct: 172 IIKRAGAPEGSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAG-KNLKKST 229
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
+ELGG ++ DD D ++ +N G++C +S R+ V++ YDE +L
Sbjct: 230 MELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVF 289
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
GDP + P +K +++ + ++ GA + I KG + PTI
Sbjct: 290 SNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTIL 349
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
T++ +D + E+FGP+ + + AI+ AN++ YGL + ++ D++ A VS I
Sbjct: 350 TDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQI 409
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
G+ IN + + P+GG K SG+GR+ L ++ V+
Sbjct: 410 ETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 418 bits (1076), Expect = e-144
Identities = 124/406 (30%), Positives = 183/406 (45%), Gaps = 3/406 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ + HAE +A + GK A+ ++ +A +YA + +
Sbjct: 56 TLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTL 114
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
Q P+GV+ I+PWNFP P L AG + ++K A A A
Sbjct: 115 VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIAR 174
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ AG P GV V I I V+ TGS G + A + LK
Sbjct: 175 ILAEAGTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAG-AALKKCV 232
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGG P ++ +D D+ A A+ G N G++C A+ R V+EGI F + V A
Sbjct: 233 LELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAA 292
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
A +GDP GP D + ++ EGA LL GG+ I +G Y T+
Sbjct: 293 AALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVL 352
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+VT DM + E+FGPV A+ K A+ AN++ +GL+A I T D +A ++ +
Sbjct: 353 ADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARL 412
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
G ++IN Y A D+ +GG K SGFGR+ LH + V++V
Sbjct: 413 ECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 414 bits (1067), Expect = e-142
Identities = 151/410 (36%), Positives = 232/410 (56%), Gaps = 7/410 (1%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K+ +L+ ++ + LA + ++GK A G+I +A L +++ A +++G+++
Sbjct: 75 LLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHT 133
Query: 87 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP AL A
Sbjct: 134 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 193
Query: 146 HLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++ AA +++
Sbjct: 194 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA-NSV 252
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
K VS+ELGG +P ++FD +V+ A A+ N G+ CV S++ VQ GI+D F K
Sbjct: 253 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 312
Query: 263 VEKAKAW-VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
E K VG+ F+ QGP +++K +++ + +GAT++TGGK +
Sbjct: 313 AEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFF 372
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EPT+ NVT+DML E FGP+ ++KF T EEAI AN GLA ++D
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWR 432
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
V+ + G++ +N +CP+GG K SG GR+ + YL++K V
Sbjct: 433 VAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 375 bits (964), Expect = e-126
Identities = 83/437 (18%), Positives = 146/437 (33%), Gaps = 46/437 (10%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ A +E ++ + L+ G+I AN LR +A + +
Sbjct: 57 LLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAIL 115
Query: 87 SRALQG---------YTLREPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAE 135
+ +G V NFP + + ALAAGC +IVK
Sbjct: 116 DTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHT 175
Query: 136 QTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
P + A + A +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 176 AHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 235
Query: 192 QVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTA--ADMALLGILFNKGEICVASSRV 248
+ A P ELG +P IF A AD + + G+ C V
Sbjct: 236 ALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 295
Query: 249 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308
+ + +E A++ + P+ P + + + G +G +
Sbjct: 296 FALNTPETQ---AFIETAQS--LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDVT 347
Query: 309 TGGKPIGKKGYYIEPTIFTNVTEDML---IAKNEIFGPVMALMKFKTVEEAIKSANNTRY 365
+ +F +E+ + EIFGP ++ + V + + +
Sbjct: 348 FSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAG 403
Query: 366 GLAAGIMT--KDLNVANTVSRSI--RAGIIWINCYFAFDSDC-------PYGGYKMSGFG 414
L A I +D + + + AG + N + PY S
Sbjct: 404 SLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-S 462
Query: 415 RDCGLESLHNYLQVKSV 431
G E++H +L+ +
Sbjct: 463 TSVGAEAIHRWLRPVAY 479
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 340 bits (873), Expect = e-113
Identities = 81/434 (18%), Positives = 144/434 (33%), Gaps = 39/434 (8%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
I + + LA ++G K+ A+ + Y ++ G +L+
Sbjct: 34 IFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEE 91
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
L T+ EP+G++ I+P PT+ K +L +I P + A
Sbjct: 92 DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAK 151
Query: 147 L----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
L A AG P ++ + A+ H DI + TG + + AA S+
Sbjct: 152 LVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK-----AAYSSG 206
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
KP G P++I + D+ A L+ F+ G +C + V V + +YDE +++
Sbjct: 207 KPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF 266
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
+ D VR+ +D +I+ E A G + +
Sbjct: 267 ASHKAHVLSKTDADK-VRKVLLIDGALNAKIVGQPATAIAEMA-----GVKVPADTKVLI 320
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIMTKDL-- 376
V+ D A E P + + + E+A+ A G +G+ T
Sbjct: 321 GEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVN 379
Query: 377 -NVANTVSRSIRAGIIWINCYFAFD---SDCPYGGYKMSGFGRDCGLE---------SLH 423
+ ++ I IN + G CG
Sbjct: 380 ADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLG--CGSWGGNSISENVGPK 437
Query: 424 NYLQVKSVVTPIFN 437
+ + K+V N
Sbjct: 438 HLINKKTVAKRAEN 451
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 353 bits (908), Expect = e-113
Identities = 118/414 (28%), Positives = 193/414 (46%), Gaps = 16/414 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ + A L+E + L + GK A + ++ AA+ RYYA K+ G M
Sbjct: 577 ALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAM 635
Query: 87 SRAL--QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
GV I PWNFP +F +V+ AL AG +++ KPAEQTP IA
Sbjct: 636 PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREA 695
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN--L 202
L AG+P L +V G G GAA+ +H DI V FTGST+V R + +A A + +
Sbjct: 696 VALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPI 754
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
P+ E GG + ++ AD + + G+ C A ++VQE + D + +
Sbjct: 755 VPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMV 814
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
A+ +GDP D A GP +D + R+ ++I K E G P +G ++
Sbjct: 815 AGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAP---EGCFVA 871
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
P IF + E+FGP++ +++++ +E +++ T YGL G+ ++ +
Sbjct: 872 PHIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIE 929
Query: 381 TVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 431
+ ++ G I++N A P+GG +SG G + G L + ++V
Sbjct: 930 AIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTV 983
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 320 bits (822), Expect = e-105
Identities = 83/420 (19%), Positives = 134/420 (31%), Gaps = 44/420 (10%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA------DKIH 80
+ AD IE AE + + + + G + G+ LR +A D+
Sbjct: 90 FLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRV 148
Query: 81 GEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAE 135
+ + ++ P+G V NFP + ALAAGC ++VK
Sbjct: 149 DAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHS 208
Query: 136 QTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
P A + GV GV +++ G G A+ H I V FTGS GR
Sbjct: 209 AHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268
Query: 192 QVM-QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA---LLGILFNKGEICVASSR 247
+ AA P ELG +P+ + + A + + G+ C
Sbjct: 269 ALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328
Query: 248 VYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 306
V EG D F VE + + + + +F R
Sbjct: 329 AVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVK 379
Query: 307 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN---EIFGPVMALMKFKTVEEAIKSANNT 363
L + G P +F L E+FGP+ +++ + E + A
Sbjct: 380 PLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF 436
Query: 364 RYGLAAGIMTKDLNVAN----TVSRSIRAGIIWINCYFAFDSDCPY----GGYKMSGFGR 415
+ L A I ++ +AG + +N + G Y S
Sbjct: 437 QGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFG 496
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = 2e-97
Identities = 145/420 (34%), Positives = 214/420 (50%), Gaps = 24/420 (5%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
I+ F L+ +H E LA L ++ GK A G++ + + AGA + G+ L
Sbjct: 70 ILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
++ ++ R PIGVVG I P+NFP + A+A G T I+KP+E+TPL+
Sbjct: 129 IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLV 188
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L + AG+P GV NVV G I H +I +SF GS VG V + NLK V
Sbjct: 189 ELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYV-YKKGSENLKRV 246
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVE 264
G K+ ++ +D ++ ++G F + GE C+A + V V+EGI DEF KL E
Sbjct: 247 QSLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQE 305
Query: 265 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEP 323
K +G+ D V GP + + R LSYIE G EGA L+ G+ GY++ P
Sbjct: 306 KVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGP 365
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
TIF NVT +M I K+EIF PV+++++ K ++EAI+ AN + + A + T + N
Sbjct: 366 TIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFR 425
Query: 384 RSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD---CGLESLHNYLQVKSVVT 433
+I AG++ IN +F F G+K S FG G +S+ Y + K V
Sbjct: 426 ENIDAGMLGINLGVPAPMAFFPF------SGWKSSFFG-TLHANGKDSVDFYTRKKVVTA 478
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 292 bits (750), Expect = 4e-94
Identities = 135/424 (31%), Positives = 210/424 (49%), Gaps = 28/424 (6%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK- 85
+ +KF L+ ++ LA + + + GK AK GDI + G E +
Sbjct: 91 VFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ Y++R+P+G+ I P+NFP + +PA+A G I+KP+E+ P + + A
Sbjct: 150 AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLA 209
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
L AG+P G+LNVV G A AI +H DI VSF GST + R V A N K
Sbjct: 210 ELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYV-YGTAAMNGKRA 267
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEKKLV 263
G K+ ++I D D++ AA+ AL+G + + GE C+A S V V E + KLV
Sbjct: 268 QCFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLV 326
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 319
++ +G D GP V K+ RI S I+ G +GA L+ G+ + G+
Sbjct: 327 PMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGH 386
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
+I +F +VT DM I K EIFGPV+++++ + EEA+ YG I T+D + A
Sbjct: 387 FIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAA 446
Query: 380 NTVSRSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD---CGLESLHNYLQVK 429
+ I G++ +N Y +F GG+K S FG D G +S+ + + K
Sbjct: 447 RDFASRINIGMVGVNVPIPVPLAYHSF------GGWKSSSFG-DLNQHGTDSIKFWTRTK 499
Query: 430 SVVT 433
++ +
Sbjct: 500 TITS 503
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 281 bits (721), Expect = 1e-90
Identities = 73/445 (16%), Positives = 140/445 (31%), Gaps = 58/445 (13%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLK 85
I+ AD E LA + + G K+ A+ ++ + +LK
Sbjct: 39 IVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFAS---KHVYNYIKDMKTIGMLK 95
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
+ + P+GVV +IP PT+ K ++ AG +++ P L
Sbjct: 96 EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155
Query: 146 HL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
+ A+ AG P G ++ + + H D + TG + + + S+
Sbjct: 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAY-----SS 210
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
P G P I ++ A L F+ G IC + V V+ + +
Sbjct: 211 GTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAE 270
Query: 262 LVEKAKAWVVGD--------PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313
++ ++ P P + K I + A +L +
Sbjct: 271 FRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE- 329
Query: 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY----GLAA 369
T V + ++ E P++A +T +EA + + + Y G
Sbjct: 330 -------------TKVGAKIPYSR-EKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375
Query: 370 GIMTKDLNVANTVSRSIRAGIIWIN-------------CYFAFDSDCPYGGYKMSGFGRD 416
I ++D + + + +N A C G S +
Sbjct: 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC--GAVGGSSSSDN 433
Query: 417 CGLESLHNYLQVKSVVTPIFNSPWL 441
G E N ++ + T + +
Sbjct: 434 IGPE---NLFNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 262 bits (672), Expect = 3e-82
Identities = 101/408 (24%), Positives = 174/408 (42%), Gaps = 29/408 (7%)
Query: 27 IMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-L 84
+ LK AD++ + + GK A++ + R+ A A ++ GE +
Sbjct: 127 VFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPI 186
Query: 85 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
+ + R G V I P+NF + G ++ KP++ L +
Sbjct: 187 SVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAMLASYAV 245
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS---- 200
+ + AG+P ++ VP GPT G + S + ++FTGS + + + A +
Sbjct: 246 YRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRF 305
Query: 201 -NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
++ E GGK+ + DV++ L G+ C A SR+YV + ++ + +
Sbjct: 306 RTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365
Query: 260 KKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKK 317
+L+E+ VGDP D +D K F RI ++EH + ++L GG+
Sbjct: 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESV 425
Query: 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANN-TRYGLAAGIMTK 374
GYY+EP I + I K EIFGPV+ + + E +K ++ T YGL + +
Sbjct: 426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQ 485
Query: 375 DLNVANTVSRSIR--AGIIWINCYFAFDSDC--------PYGGYKMSG 412
D + +R +R AG +IN P+GG + SG
Sbjct: 486 DKAIVQEATRMLRNAAGNFYIND------KSTGSVVGQQPFGGARASG 527
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 4e-69
Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 57/412 (13%)
Query: 30 KFADLIEEHAEVLAVLEAL--DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG----EV 83
LI+E + ++ AL D K A ++ + Y K+ E
Sbjct: 48 ALQRLIQEQEQ--ELVGALAADLHKNEWNAYYEEVVYVLEEIEY---MIQKLPEWAADEP 102
Query: 84 LKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQT 137
++ + Q Y EP+GVV I WN+P F + + P A+AAG +++KP+E +
Sbjct: 103 VEKTPQTQQDELYIHSEPLGVVLVIGTWNYP---FNLTIQPMVGAIAAGNAVVLKPSELS 159
Query: 138 P--------LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
+I Y D V+ G G + D + +TGST V
Sbjct: 160 ENMASLLATIIPQYLD--------KDLY-PVING-GVPETTELLKE-RFDHILYTGSTGV 208
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
G+ +M AAA +L PV+LELGGKSP + + D++ A G N G+ CVA +
Sbjct: 209 GKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYIL 267
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGA 305
I ++ +KL + K + D ++ + + F R++ IE K
Sbjct: 268 CDPSIQNQIVEKLKKSLKEFYGEDA-----KKSRDYGRIISARHFQRVMGLIEGQK---- 318
Query: 306 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 365
+ GG YI PTI T+V + + EIFGPV+ ++ +++EEAI+ N
Sbjct: 319 -VAYGGT-GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREK 376
Query: 366 GLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFGR 415
LA + + + V + +G + N P+GG SG G
Sbjct: 377 PLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGS 428
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 4e-61
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 58/412 (14%)
Query: 30 KFADLIEEHAEVLAVLEAL--DAGKLHSWAKMGDIPGAANTLRYYAGAADKIH------- 80
+ + + + E A+ AL D GK + +I + + + A +
Sbjct: 58 RLKEAVINNKE--ALYSALAEDLGKPKDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVS 112
Query: 81 ---GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPA 134
+++ S Y ++EP GV I P+N+P + ++P A+ G T I+KP+
Sbjct: 113 VPSPDIIAPSEC---YVVQEPYGVTYIIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPS 166
Query: 135 EQTP--------LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 186
E TP +IA F + V+ G G + + S D + FTGS
Sbjct: 167 ETTPETSAVIEKIIAEAF---------APEYVAVIQG-GRDENSHLLSL-PFDFIFFTGS 215
Query: 187 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 246
+VG+ VMQAAA +L PV LELGGK PL++ D D++ + + G N G+ +A
Sbjct: 216 PNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPD 274
Query: 247 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 306
+YV + D ++LVE+ K + + V ++Q R++S +E + +
Sbjct: 275 YLYVHYSVKDALLERLVERVKTELPEINSTGKL-----VTERQVQRLVSLLEATQGQVLV 329
Query: 307 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-Y 365
G + T+ V + + E+FGP++ +++F +V AI N
Sbjct: 330 ----GSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPK 385
Query: 366 GLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 415
LA + KD++VA + I++G +N AF P+GG SG G
Sbjct: 386 PLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGE 437
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 4e-07
Identities = 68/522 (13%), Positives = 134/522 (25%), Gaps = 166/522 (31%)
Query: 17 HGHVFLEPRGIMLKFADLIEEHAEV----LAVLEALDAGK-LHSWAKMGDI---PGAANT 68
H H+ E ++ D++ + + D K + S ++ I A +
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 69 LRY------------------------YAGAADKIHGEVLKMSRALQGY-TLREPIGVVG 103
Y I E + S + Y R+ +
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 104 HII-PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 162
+ +N ++K+ AL + ++PA + + GVL
Sbjct: 124 QVFAKYNVSRLQPYLKLRQAL-----LELRPA---KNVLID------------GVL---- 159
Query: 163 GFGPT--AGAAIASHMDIDKVSFT------GSTDVGRQVMQAAAT--SNLKPVSLELGGK 212
G G T A S+ K+ F + + V++ + P
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 213 SP-------------------------LLIFDDV-DVNTAADMALLG--ILFNKGEICVA 244
S LL+ +V + L IL V
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN-LSCKILLTTRFKQVT 278
Query: 245 SS------RVYVQEGIYDEFEKKLVEK--AKAWVVGDPFD---------P--------AV 279
+ V+ K ++ P D P ++
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 280 RQGP-------QVDKKQFDRIL-SYIEHGKREGATLLTGGKPIGKKGYYIEPTIF---TN 328
R G V+ + I+ S + L +P + + ++F +
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNV-------L----EPAEYRKMFDRLSVFPPSAH 386
Query: 329 VTEDMLIA--KNEIFGPVMALM-KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS-- 383
+ +L + I VM ++ K K + + + + + + N +
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 425
RSI ++ Y + D L Y
Sbjct: 447 RSI------VDHYNIPKTFDSD----------DLIPPYLDQY 472
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 98.25 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.7 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-97 Score=757.87 Aligned_cols=435 Identities=42% Similarity=0.712 Sum_probs=413.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++.+|.++|+++++.|++|+++|++++++|+|||+.++...|+..+++.+++++++
T Consensus 40 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~ 119 (490)
T 2wme_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 467888888875 457899999999999999999999999999999999999986555799999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++++.+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~ 199 (490)
T 2wme_A 120 VPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPD 199 (490)
T ss_dssp GGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCT
T ss_pred cccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCC
Confidence 98887777666667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.++.|+.||++|.|.||||+.+|+.+.+.++.+.+||+++|+|||||+||++|||++.|++.+++++|
T Consensus 200 gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~ 279 (490)
T 2wme_A 200 GVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF 279 (490)
T ss_dssp TSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh
Confidence 99999999888899999999999999999999999999876665788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++.+|+++++||....
T Consensus 280 ~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 359 (490)
T 2wme_A 280 FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359 (490)
T ss_dssp GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCC
T ss_pred ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|
T Consensus 360 ~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v 439 (490)
T 2wme_A 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439 (490)
T ss_dssp TTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEE
T ss_pred cccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEE
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
+||++....+.+||||+|.||+|+++|.+|+++||+.|+|++++.+.
T Consensus 440 ~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g~~ 486 (490)
T 2wme_A 440 WINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp EESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred EEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECCCC
Confidence 99998888889999999999999999999999999999999998643
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-93 Score=735.75 Aligned_cols=436 Identities=38% Similarity=0.684 Sum_probs=410.2
Q ss_pred CCCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a 144 (520)
T 3ed6_A 66 EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFA 144 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHH
Confidence 345666665553 567899999999999999999999999999999999999975 569999999999999
Q ss_pred HhhhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 74 GAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
.+++++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|
T Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaG 224 (520)
T 3ed6_A 145 GLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVG 224 (520)
T ss_dssp HHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhC
Confidence 99887766555443 45677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+||++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++
T Consensus 225 lP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~ 303 (520)
T 3ed6_A 225 FPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALN 303 (520)
T ss_dssp CCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHH
Confidence 9999999999977889999999999999999999999999999988 789999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 304 ~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~ 383 (520)
T 3ed6_A 304 GGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383 (520)
T ss_dssp HHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 313 PIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 313 ~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 384 ~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~a 463 (520)
T 3ed6_A 384 RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKL 463 (520)
T ss_dssp CCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred cCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCc
Confidence 642 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC--CCC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS--PWL 441 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~--~~~ 441 (441)
|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|++++.+. +|+
T Consensus 464 G~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 464 GTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp SEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred ceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 99999999888889999999999999999999999999999999988643 564
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-93 Score=731.51 Aligned_cols=429 Identities=35% Similarity=0.591 Sum_probs=406.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++.+
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~a~~ 124 (484)
T 3ifg_A 46 KMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEE 124 (484)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356677777664 56789999999999999999999999999999999999997 567999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 204 (484)
T 3ifg_A 125 GKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVP 204 (484)
T ss_dssp HTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCC
Confidence 877666555432 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 205 ~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 283 (484)
T 3ifg_A 205 KGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASK 283 (484)
T ss_dssp TTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred cccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999877889999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...
T Consensus 284 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 363 (484)
T 3ifg_A 284 YRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363 (484)
T ss_dssp HGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 364 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN 443 (484)
T 3ifg_A 364 ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGIN 443 (484)
T ss_dssp TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEc
Confidence 55799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.....+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 444 ~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 444 TGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9877788999999999999999999999999999999875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-93 Score=729.69 Aligned_cols=429 Identities=26% Similarity=0.428 Sum_probs=407.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 22 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 100 (484)
T 3ros_A 22 NPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES-KEEVELCVSICNYYADH 100 (484)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999975 47999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++++.+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 180 (484)
T 3ros_A 101 GPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPE 180 (484)
T ss_dssp HHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCT
T ss_pred HHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCc
Confidence 88876665444456678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.+. |+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 181 gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 258 (484)
T 3ros_A 181 GSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART 258 (484)
T ss_dssp TSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT
T ss_pred CeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh
Confidence 999999997777777 999999999999999999999999988 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...+
T Consensus 259 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 338 (484)
T 3ros_A 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEID 338 (484)
T ss_dssp GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 339 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~ 418 (484)
T 3ros_A 339 SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVING 418 (484)
T ss_dssp CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETS
T ss_pred CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+....+.+||||+|+||+|+++|.+++++||+.|+|+++.
T Consensus 419 ~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 419 RWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp CCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred CCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 8778899999999999999999999999999999998875
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-93 Score=730.61 Aligned_cols=430 Identities=32% Similarity=0.574 Sum_probs=408.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~ 123 (506)
T 3rh9_A 45 SMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEA-QGEVDYAAGFFDYCAKH 123 (506)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 467788888875 446899999999999999999999999999999999999975 48999999999999999
Q ss_pred hhhhcCceeccccccccceee-cccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+...+...+.++ +|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 203 (506)
T 3rh9_A 124 ISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLP 203 (506)
T ss_dssp GGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCC
T ss_pred HHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcC
Confidence 988776655544566778889 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 204 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 282 (506)
T 3rh9_A 204 DGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANK 282 (506)
T ss_dssp TTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred hhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 283 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~ 362 (506)
T 3rh9_A 283 FRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPA 362 (506)
T ss_dssp HGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGG
T ss_pred HHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CC-CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 315 GK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 315 ~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 363 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~v 442 (506)
T 3rh9_A 363 ELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGW 442 (506)
T ss_dssp GCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred CCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEE
Confidence 43 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|+||+|+++|++++++||+.|+|+++.
T Consensus 443 N~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 443 NTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp SCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred cCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999888889999999999999999999999999999998864
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-93 Score=732.53 Aligned_cols=435 Identities=40% Similarity=0.680 Sum_probs=410.8
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++
T Consensus 58 ~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~ 136 (528)
T 3u4j_A 58 ASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAG 136 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 45666665553 567899999999999999999999999999999999999985 7899999999999999
Q ss_pred hhhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGl 216 (528)
T 3u4j_A 137 QARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216 (528)
T ss_dssp HHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred HHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCC
Confidence 9888766655544 456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++++
T Consensus 217 P~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~ 295 (528)
T 3u4j_A 217 PDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYG 295 (528)
T ss_dssp CTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHH
Confidence 999999999987889999999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 296 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 375 (528)
T 3u4j_A 296 VYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGER 375 (528)
T ss_dssp HHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSE
T ss_pred HhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC-CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 314 IGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 314 ~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 376 ~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~ 455 (528)
T 3u4j_A 376 IGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455 (528)
T ss_dssp ECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred CCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence 543 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC-CCCCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF-NSPWL 441 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~-~~~~~ 441 (441)
||++....+.+||||+|+||+|+++|.+++++||+.|+|+++.. -.+|+
T Consensus 456 vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 456 INSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp ESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESSCCCCSC
T ss_pred ECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCCCCCCcc
Confidence 99998888999999999999999999999999999999998875 44564
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-92 Score=726.87 Aligned_cols=433 Identities=52% Similarity=0.906 Sum_probs=407.0
Q ss_pred CCCHHHHHHHH-----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI-----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 72 (441)
Q Consensus 4 ~~~~~~~~~a~-----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 72 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 54 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~ 133 (501)
T 1bxs_A 54 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 133 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566666655 3667899999999999999999999999999999999999976678999999999999
Q ss_pred HHhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 73 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
++.++++.+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|
T Consensus 134 a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aG 213 (501)
T 1bxs_A 134 AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213 (501)
T ss_dssp HHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhC
Confidence 99988776654443345567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 214 lP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~ 293 (501)
T 1bxs_A 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQ 293 (501)
T ss_dssp CCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHH
Confidence 99999999999777889999999999999999999999999998775688999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 294 ~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~ 373 (501)
T 1bxs_A 294 GVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373 (501)
T ss_dssp HHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred HHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 374 ~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 453 (501)
T 1bxs_A 374 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453 (501)
T ss_dssp EECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred cCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEE
Confidence 64346999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 454 iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 454 VNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp ESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred ECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 99987777899999999999999999999999999999988764
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-92 Score=729.97 Aligned_cols=436 Identities=43% Similarity=0.728 Sum_probs=407.5
Q ss_pred CCCHHHHHHHH-------------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH
Q 013526 4 LPSRQHVRRLI-------------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 70 (441)
Q Consensus 4 ~~~~~~~~~a~-------------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~ 70 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++
T Consensus 41 ~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e-a~~ev~~~~~~~~ 119 (503)
T 3iwj_A 41 AATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFE 119 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHH
Confidence 34666666655 366789999999999999999999999999999999999997 4679999999999
Q ss_pred HHHHhhhhhcCce-ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHH
Q 013526 71 YYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146 (441)
Q Consensus 71 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~ 146 (441)
+++.+++++.+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++
T Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 199 (503)
T 3iwj_A 120 YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGE 199 (503)
T ss_dssp HHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHH
Confidence 9999887765432 111 134567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHH
Q 013526 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 226 (441)
Q Consensus 147 ~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~a 226 (441)
++.++|+|+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|
T Consensus 200 l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~A 278 (503)
T 3iwj_A 200 ICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKA 278 (503)
T ss_dssp HHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHH
T ss_pred HHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHH
Confidence 9999999999999999987788999999999999999999999999999987 789999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCe
Q 013526 227 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 306 (441)
Q Consensus 227 a~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~ 306 (441)
++.+++++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|++
T Consensus 279 a~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 358 (503)
T 3iwj_A 279 AEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGAT 358 (503)
T ss_dssp HHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCcCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH
Q 013526 307 LLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384 (441)
Q Consensus 307 v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 384 (441)
+++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 359 v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 438 (503)
T 3iwj_A 359 ILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTK 438 (503)
T ss_dssp EEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 999998654 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCC--CCCC
Q 013526 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN--SPWL 441 (441)
Q Consensus 385 ~l~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~--~~~~ 441 (441)
++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++... .+|+
T Consensus 439 ~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 439 AFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred hCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 99999999999877788999999999999999999999999999999987653 3454
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-93 Score=728.39 Aligned_cols=430 Identities=33% Similarity=0.593 Sum_probs=408.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus 58 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~ 137 (498)
T 4f3x_A 58 EASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGA 137 (498)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 456777777764 668899999999999999999999999999999999999985478999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP 216 (498)
T 4f3x_A 138 VRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LP 216 (498)
T ss_dssp TTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SC
T ss_pred HHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CC
Confidence 88776654433 24667889999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++|||++.|++.+++++
T Consensus 217 ~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~ 295 (498)
T 4f3x_A 217 EGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFG 295 (498)
T ss_dssp TTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHT
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999988 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCC-eEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~ 313 (441)
|.|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+ ++++||..
T Consensus 296 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~ 375 (498)
T 4f3x_A 296 YYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT 375 (498)
T ss_dssp TGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSB
T ss_pred HhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999987
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 376 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~v 455 (498)
T 4f3x_A 376 GSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWI 455 (498)
T ss_dssp CCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|+||+|+++|.+++++||+.|+|++++
T Consensus 456 N~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 456 NTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp SCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999887899999999999999999999999999999998865
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-93 Score=729.16 Aligned_cols=429 Identities=39% Similarity=0.650 Sum_probs=406.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++.+
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e-a~~ev~~~~~~~~~~a~~ 144 (504)
T 3ek1_A 66 SLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEE 144 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 456777777774 55789999999999999999999999999999999999997 456999999999999999
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 145 ~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP 224 (504)
T 3ek1_A 145 AKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIP 224 (504)
T ss_dssp HTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCC
Confidence 877666554432 3567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 225 ~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~ 303 (504)
T 3ek1_A 225 AGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSK 303 (504)
T ss_dssp TTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred cccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHH
Confidence 99999999878889999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 304 f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~- 382 (504)
T 3ek1_A 304 YRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE- 382 (504)
T ss_dssp HGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-
T ss_pred HhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 383 -~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN 461 (504)
T 3ek1_A 383 -LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHN 461 (504)
T ss_dssp -EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEES
T ss_pred -CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+.....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 462 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 462 TGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp CSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred CCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 987778899999999999999999999999999999988754
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-92 Score=726.88 Aligned_cols=432 Identities=50% Similarity=0.841 Sum_probs=405.9
Q ss_pred CCHHHHHHHH-----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI-----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 5 ~~~~~~~~a~-----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++
T Consensus 54 ~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a 133 (500)
T 1o04_A 54 GDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYA 133 (500)
T ss_dssp BCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556666655 36668999999999999999999999999999999999999766689999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.++++.+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGl 213 (500)
T 1o04_A 134 GWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGF 213 (500)
T ss_dssp HHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTC
T ss_pred HHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCC
Confidence 98877766544433445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 214 P~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 293 (500)
T 1o04_A 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293 (500)
T ss_dssp CTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHH
T ss_pred CcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHH
Confidence 99999999997778899999999999999999999999999988757889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 294 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 373 (500)
T 1o04_A 294 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373 (500)
T ss_dssp HHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred HhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 374 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~i 453 (500)
T 1o04_A 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWV 453 (500)
T ss_dssp CCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEE
Confidence 53469999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 454 N~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 454 NCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp SCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred CCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9988777899999999999999999999999999999988754
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-92 Score=728.00 Aligned_cols=431 Identities=41% Similarity=0.754 Sum_probs=403.5
Q ss_pred CCHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus 71 a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~ 150 (517)
T 2o2p_A 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAG 150 (517)
T ss_dssp CCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666554 377889999999999999999999999999999999999997544799999999999999
Q ss_pred hhhhhcCceeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 75 ~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+++++.+..++.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 151 ~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~e 230 (517)
T 2o2p_A 151 WCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLK 230 (517)
T ss_dssp HGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH
Confidence 9887766554432 223568999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+
T Consensus 231 aGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i 310 (517)
T 2o2p_A 231 AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMG 310 (517)
T ss_dssp TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred hCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHH
Confidence 99999999999997778899999999999999999999999999987635789999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++|||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 311 ~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~g 390 (517)
T 2o2p_A 311 MSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCG 390 (517)
T ss_dssp HHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
|......|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++|+++|||++||||+|.++++++++++++
T Consensus 391 G~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 470 (517)
T 2o2p_A 391 GNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470 (517)
T ss_dssp CSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCS
T ss_pred cccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCE
Confidence 986544699999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 471 G~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~~ 517 (517)
T 2o2p_A 471 GTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 517 (517)
T ss_dssp SEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEeeC
Confidence 99999998777789999999999999999999999999999998753
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-92 Score=724.49 Aligned_cols=432 Identities=38% Similarity=0.687 Sum_probs=406.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 54 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 132 (503)
T 1a4s_A 54 PCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGL 132 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 45667777766 3668899999999999999999999999999999999999975 67999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~ 212 (503)
T 1a4s_A 133 APTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPV 212 (503)
T ss_dssp GGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCT
T ss_pred HHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCc
Confidence 88776654443334567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++.+ +.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 213 gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~ 290 (503)
T 1a4s_A 213 GLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290 (503)
T ss_dssp TSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC
T ss_pred CeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH
Confidence 9999999977 88999999999999999999999999999988 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC-
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI- 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~- 314 (441)
.|+||.|++++++|||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 291 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~ 370 (503)
T 1a4s_A 291 LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370 (503)
T ss_dssp GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCC
T ss_pred hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred -C----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 315 -G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 315 -~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 371 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 450 (503)
T 1a4s_A 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAG 450 (503)
T ss_dssp CSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSS
T ss_pred cccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCcee
Confidence 2 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.+.
T Consensus 451 ~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~ 499 (503)
T 1a4s_A 451 TCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDV 499 (503)
T ss_dssp EEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSCC
T ss_pred EEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEccCCC
Confidence 9999998877788999999999999999999999999999999876553
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-92 Score=723.47 Aligned_cols=431 Identities=33% Similarity=0.556 Sum_probs=405.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 124 (497)
T 3k2w_A 46 AGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDN 124 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999975 57999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP 204 (497)
T 3k2w_A 125 ALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLP 204 (497)
T ss_dssp TTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcC
Confidence 88776655443 24567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 205 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 283 (497)
T 3k2w_A 205 DGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGR 283 (497)
T ss_dssp TTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHH
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999977789999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc-
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP- 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~- 313 (441)
|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 284 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 363 (497)
T 3k2w_A 284 FANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTA 363 (497)
T ss_dssp HGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC--
T ss_pred HhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred -CCC--CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 314 -IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 314 -~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 364 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 443 (497)
T 3k2w_A 364 TVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGE 443 (497)
T ss_dssp -------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSE
T ss_pred CccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeE
Confidence 222 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 444 v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 444 VYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp EEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred EEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 9999998888999999999999999999999999999999998764
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-91 Score=720.88 Aligned_cols=430 Identities=40% Similarity=0.659 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++++
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 138 (515)
T 2d4e_A 60 RGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEY 138 (515)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 356677777663 5678999999999999999999999999999999999999754 8999999999999998
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+..++. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 218 (515)
T 2d4e_A 139 AEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLP 218 (515)
T ss_dssp GGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCC
Confidence 88876665544 23456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 219 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 297 (515)
T 2d4e_A 219 PGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQI 297 (515)
T ss_dssp TTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...
T Consensus 298 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 377 (515)
T 2d4e_A 298 FSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERA 377 (515)
T ss_dssp HGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred C--------CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 315 G--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 315 ~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
. ..|+|++|||+.+ +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++
T Consensus 378 ~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 456 (515)
T 2d4e_A 378 KTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALEL 456 (515)
T ss_dssp CBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS
T ss_pred cccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 3 2699999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 387 ~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 457 ~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 457 EAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp CSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred CeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcCC
Confidence 99999999987777899999999999999999999999999999998764
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-92 Score=721.35 Aligned_cols=418 Identities=39% Similarity=0.658 Sum_probs=398.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceecccccccccee
Q 013526 16 VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL 95 (441)
Q Consensus 16 ~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (441)
|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.++++.+..++.+.+...+.+
T Consensus 64 w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~ 143 (495)
T 3b4w_A 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVS 143 (495)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEE
Confidence 67789999999999999999999999999999999999997544799999999999999988877765544334467899
Q ss_pred ecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC
Q 013526 96 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 175 (441)
Q Consensus 96 ~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~ 175 (441)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|++++ +.+.+..|+.|
T Consensus 144 ~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~ 222 (495)
T 3b4w_A 144 REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSN 222 (495)
T ss_dssp EEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTC
T ss_pred EccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 88899999999
Q ss_pred CCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccH
Q 013526 176 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 255 (441)
Q Consensus 176 ~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~ 255 (441)
|++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++|
T Consensus 223 ~~v~~I~FTGS~~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 301 (495)
T 3b4w_A 223 PDIDMFTFTGSSAVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301 (495)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGH
T ss_pred CCcCEEEEeCCHHHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHH
Confidence 99999999999999999999988 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC--CCCceeecEEEeeCCCCc
Q 013526 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 256 ~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~ 333 (441)
++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|
T Consensus 302 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~ 381 (495)
T 3b4w_A 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKM 381 (495)
T ss_dssp HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998643 368999999999999999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCCCCCCccCCCCCCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF 413 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p~GG~~~SG~ 413 (441)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+
T Consensus 382 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~ 460 (495)
T 3b4w_A 382 TIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGI 460 (495)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEE
T ss_pred hhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999987 778999999999999
Q ss_pred CCcchHHHHHhhhhccEEEEeCC
Q 013526 414 GRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 414 g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+++|.+++++||+.|+|++++.
T Consensus 461 Gr~~G~~gl~~~~~~k~v~~~~~ 483 (495)
T 3b4w_A 461 GRENGPEGVEHFTQQKSVLLPMG 483 (495)
T ss_dssp SCBSHHHHHHTTEEEEEEECCTT
T ss_pred CccchHHHHHHhcceeEEEEccC
Confidence 99999999999999999988753
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-91 Score=717.44 Aligned_cols=429 Identities=37% Similarity=0.627 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 43 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~ 121 (481)
T 3jz4_A 43 KMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEE 121 (481)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356677776664 56789999999999999999999999999999999999997 467999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..+..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP 201 (481)
T 3jz4_A 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVP 201 (481)
T ss_dssp GGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcC
Confidence 776655544432 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 202 ~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 280 (481)
T 3jz4_A 202 AGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASK 280 (481)
T ss_dssp TTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 99999999987889999999999999999999999999999987 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 281 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 360 (481)
T 3jz4_A 281 FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 360 (481)
T ss_dssp HGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||
T Consensus 361 ~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 440 (481)
T 3jz4_A 361 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGIN 440 (481)
T ss_dssp TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEEC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 441 ~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 441 TGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9888888999999999999999999999999999999875
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-92 Score=726.28 Aligned_cols=431 Identities=39% Similarity=0.674 Sum_probs=404.3
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ |+..+++.+++++.+
T Consensus 48 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~ 124 (517)
T 3r31_A 48 AATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFF 124 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHH
Confidence 456777777764 557899999999999999999999999999999999999975 999999999999998
Q ss_pred hhh----hcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc
Q 013526 76 ADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151 (441)
Q Consensus 76 ~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a 151 (441)
+++ ..+...+...+. .+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 125 ~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~ea 203 (517)
T 3r31_A 125 GGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA 203 (517)
T ss_dssp HHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHT
T ss_pred hhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHh
Confidence 877 666655544455 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|++|++++ +.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 204 GlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~ 281 (517)
T 3r31_A 204 GLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAM 281 (517)
T ss_dssp TCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHH
Confidence 999999999999 7789999999999999999999999999999988 78999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||
T Consensus 282 ~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 361 (517)
T 3r31_A 282 LGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361 (517)
T ss_dssp HHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 312 KPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 312 ~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
.... +.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 362 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~a 441 (517)
T 3r31_A 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEA 441 (517)
T ss_dssp SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCC
T ss_pred ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCc
Confidence 3121 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC--CCCC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF--NSPW 440 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~--~~~~ 440 (441)
|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++.. ..||
T Consensus 442 G~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 442 GTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp SEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred ceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 999999988888999999999999999999999999999999998764 3444
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-91 Score=720.77 Aligned_cols=425 Identities=32% Similarity=0.513 Sum_probs=400.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~ 123 (505)
T 3prl_A 45 ALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADE 123 (505)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777664 668899999999999999999999999999999999999975 56999999999999999
Q ss_pred hhhhcCceeccc--c----ccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
++++.+...+.. . +...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.
T Consensus 124 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~ 203 (505)
T 3prl_A 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALA 203 (505)
T ss_dssp HHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHH
T ss_pred HHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 887766544432 1 3456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.
T Consensus 204 eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~ 280 (505)
T 3prl_A 204 DAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQ 280 (505)
T ss_dssp HTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHH
T ss_pred HhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHH
Confidence 9999999999999977889999999999999999999999999999864 8999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+++++++++++++++|+++++
T Consensus 281 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~ 359 (505)
T 3prl_A 281 IVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLS 359 (505)
T ss_dssp HHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 360 gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 436 (505)
T 3prl_A 360 GNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVG 436 (505)
T ss_dssp CCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSS
T ss_pred cCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCee
Confidence 9974 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 390 IIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 390 ~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+|+||++.. ..+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 437 ~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 437 TVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp EEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCC
Confidence 999999876 56889999999999999999999999999999998764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-91 Score=716.72 Aligned_cols=428 Identities=36% Similarity=0.606 Sum_probs=401.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 56 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~ 135 (495)
T 1wnd_A 56 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 135 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666676665 3667899999999999999999999999999999999999975434999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|
T Consensus 136 ~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP 214 (495)
T 1wnd_A 136 ARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FP 214 (495)
T ss_dssp TTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SC
T ss_pred HHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CC
Confidence 877765544432 3446688999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.+..|+.||++|.|.||||+.+++.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 215 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 293 (495)
T 1wnd_A 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFG 293 (495)
T ss_dssp TTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHT
T ss_pred cCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcC-CeEecCCC-
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK- 312 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~- 312 (441)
|.|+||.|++++++|||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++| +++++||.
T Consensus 294 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~ 373 (495)
T 1wnd_A 294 YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK 373 (495)
T ss_dssp TGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB
T ss_pred HhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 99999997
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 374 ~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 452 (495)
T 1wnd_A 374 RKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452 (495)
T ss_dssp CSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred cCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEE
Confidence 532 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 453 iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 453 VNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp ESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999877778999999999999999999999999999999875
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-91 Score=723.11 Aligned_cols=430 Identities=33% Similarity=0.530 Sum_probs=403.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 70 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 148 (538)
T 3qan_A 70 KANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQ 148 (538)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356777777764 668899999999999999999999999999999999999975 56999999999999998
Q ss_pred -hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 -ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+...+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP 228 (538)
T 3qan_A 149 MIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLP 228 (538)
T ss_dssp HHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCC
Confidence 4555565555444677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcC------CCceeeecCCCCceeecCCCCHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN------LKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~------~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+ ++|+++|+|||||+||++|||++.|++
T Consensus 229 ~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~ 307 (538)
T 3qan_A 229 KGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAE 307 (538)
T ss_dssp TTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHH
T ss_pred CCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHH
Confidence 99999999977788999999999999999999999999999987 66 899999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|.|+||.|+++++||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++.+| +++
T Consensus 308 ~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~ 386 (538)
T 3qan_A 308 SILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLM 386 (538)
T ss_dssp HHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEE
T ss_pred HHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 387 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~a 466 (538)
T 3qan_A 387 TGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHV 466 (538)
T ss_dssp ECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCe
Confidence 99987544799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEc-CcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC
Q 013526 389 GIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 389 g~v~vN-~~~~~-~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+|+|| ++... .+.+||||+|.||+| +++|.+++++||+.|+|+++..
T Consensus 467 G~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 467 GNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp SEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred eEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 999999 44443 789999999999999 9999999999999999998764
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-91 Score=715.22 Aligned_cols=429 Identities=33% Similarity=0.561 Sum_probs=403.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~ 118 (479)
T 2imp_A 40 DGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118 (479)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777663 567899999999999999999999999999999999999975 57999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 198 (479)
T 2imp_A 119 ARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLP 198 (479)
T ss_dssp TTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCC
Confidence 877666554432 3446789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 199 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~ 277 (479)
T 2imp_A 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR 277 (479)
T ss_dssp TTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTS
T ss_pred cCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999977778999999999999999999999999999988 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCC-CCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
|.|+||.|+++++||||+++|++|+++|+++++++++|+|.| +++++||++++.+++++++++++++++|+++++||..
T Consensus 278 ~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 357 (479)
T 2imp_A 278 VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKA 357 (479)
T ss_dssp STTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred hhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999976
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 358 ~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~i 437 (479)
T 2imp_A 358 VEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYI 437 (479)
T ss_dssp CCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEE
T ss_pred cCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEE
Confidence 43468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 438 N~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 438 NRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99887778999999999999999999999999999999764
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-91 Score=713.48 Aligned_cols=425 Identities=34% Similarity=0.569 Sum_probs=396.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 138 (497)
T 3i44_A 59 LGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKA 138 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777764 667899999999999999999999999999999999999985448999999999999887
Q ss_pred hhhhcCceecccccccccee-ecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.......... ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 217 (497)
T 3i44_A 139 YKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALP 217 (497)
T ss_dssp HHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred hhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcC
Confidence 6554322111 124557788 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ +++||+++|+|||||+||++||| +.|++.+++++
T Consensus 218 ~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~ 295 (497)
T 3i44_A 218 SGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHC 295 (497)
T ss_dssp TTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999988 88999999999999999999999 99999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC-c
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-P 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~ 313 (441)
|+|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||. .
T Consensus 296 f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 375 (497)
T 3i44_A 296 FYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGL 375 (497)
T ss_dssp HGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred HhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999994 3
Q ss_pred CC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 314 IG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 314 ~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 376 ~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V 455 (497)
T 3i44_A 376 PMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMV 455 (497)
T ss_dssp CTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEE
T ss_pred CCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeE
Confidence 22 2799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||+ ....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 456 ~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 456 EVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp EETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred EECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9995 456688999999999999999999999999999875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-91 Score=717.02 Aligned_cols=430 Identities=30% Similarity=0.445 Sum_probs=402.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 138 (521)
T 4e4g_A 60 LASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGI 138 (521)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999974 67999999999999987
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP 218 (521)
T 4e4g_A 139 PHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLP 218 (521)
T ss_dssp HHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCC
Confidence 77665554332 24566889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 219 ~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~ 296 (521)
T 4e4g_A 219 AGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAG 296 (521)
T ss_dssp TTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred cCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999 4566799999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
|.|+||.|++++++|||++ +|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++.+|+++++||..
T Consensus 297 f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 376 (521)
T 4e4g_A 297 YGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376 (521)
T ss_dssp HGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSS
T ss_pred HhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999975
Q ss_pred C----CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 314 I----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 314 ~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
. ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|
T Consensus 377 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG 456 (521)
T 4e4g_A 377 FKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIG 456 (521)
T ss_dssp CCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCS
T ss_pred cCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCee
Confidence 3 247999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeCC
Q 013526 390 IIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 390 ~v~vN~~~~~-~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
.|+||++... .+.+||||+|.||+| +++|.+++++||+.|+|++++.
T Consensus 457 ~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 457 MVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp EEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred eEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEecC
Confidence 9999998654 478999999999999 7899999999999999998764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-90 Score=707.51 Aligned_cols=429 Identities=29% Similarity=0.449 Sum_probs=404.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..++ ..|+..+++.++++++.
T Consensus 25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 103 (462)
T 3etf_A 25 WANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEH 103 (462)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHh
Confidence 456777777764 567899999999999999999999999999999999999974 57999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+++.+.......+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.+|.+++.++|+|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~ 183 (462)
T 3etf_A 104 GPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPA 183 (462)
T ss_dssp HHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCB
T ss_pred HHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCc
Confidence 87766554222245678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.+..|+.||+++.|.||||+.+|+.|.+.++ .+.+|+++|+|||||+||++|||++.|++.+++++|
T Consensus 184 gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 261 (462)
T 3etf_A 184 GVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY 261 (462)
T ss_dssp TTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH
Confidence 99999998 5677889999999999999999999999999988 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+
T Consensus 262 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~ 341 (462)
T 3etf_A 262 QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIA 341 (462)
T ss_dssp GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS
T ss_pred hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 342 ~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~ 421 (462)
T 3etf_A 342 GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFING 421 (462)
T ss_dssp SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESS
T ss_pred CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+....+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 422 ~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 422 YSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 8888889999999999999999999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-90 Score=710.03 Aligned_cols=423 Identities=31% Similarity=0.531 Sum_probs=399.3
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 30 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~ 108 (486)
T 3pqa_A 30 ALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFY 108 (486)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 467778877774 557899999999999999999999999999999999999975 57999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---- 151 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a---- 151 (441)
++++.+...+.. +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 109 ~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~ 187 (486)
T 3pqa_A 109 VKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKY 187 (486)
T ss_dssp HHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhc
Confidence 888766555433 567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.++
T Consensus 188 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~ 264 (486)
T 3pqa_A 188 NVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALI 264 (486)
T ss_dssp TCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHH
Confidence 99999999999977788999999999999999999999999998864 899999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++.+|+++++||
T Consensus 265 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 344 (486)
T 3pqa_A 265 KGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG 344 (486)
T ss_dssp HHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 345 ~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v 419 (486)
T 3pqa_A 345 KR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGV 419 (486)
T ss_dssp CE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEE
T ss_pred CC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceE
Confidence 75 6899999999 9999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred EEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 392 WINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 392 ~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+||+++.+ .+.+||||+|+||+|+++|.+++++||+.|+|+++..
T Consensus 420 ~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 420 VINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99998763 3589999999999999999999999999999988753
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-91 Score=713.36 Aligned_cols=428 Identities=36% Similarity=0.592 Sum_probs=403.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 44 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 122 (487)
T 2w8n_A 44 DCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEE 122 (487)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35666777665 3668899999999999999999999999999999999999975 56999999999999998
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 123 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 202 (487)
T 2w8n_A 123 ARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIP 202 (487)
T ss_dssp GGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCC
T ss_pred HHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCC
Confidence 88766665443 23556788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEe---CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 155 DGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 155 ~~~v~~~~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
+|++|+++ +.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 203 ~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~ 281 (487)
T 2w8n_A 203 SGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAM 281 (487)
T ss_dssp TTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHH
T ss_pred CCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHH
Confidence 99999999 766778999999999999999999999999999988 88999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
+++|.|+||.|+++++||||+++|++|+++|++.+++ +++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 282 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~g 361 (487)
T 2w8n_A 282 ASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 361 (487)
T ss_dssp HHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCc-eeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 311 GKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 311 g~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
|.... .|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 362 g~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 440 (487)
T 2w8n_A 362 GKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVG 440 (487)
T ss_dssp CSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSS
T ss_pred CccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCee
Confidence 98643 688 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 441 ~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 441 MVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp EEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred eEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999888778899999999999999999999999999999875
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-90 Score=712.33 Aligned_cols=428 Identities=30% Similarity=0.480 Sum_probs=401.0
Q ss_pred CCHHHHHHHH---------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLI---------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~---------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 51 ~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 129 (501)
T 1uxt_A 51 PSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELD 129 (501)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHTGGGG
T ss_pred CCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 4556666554 4778999999999999999999999999999999999999975 47999999999999998
Q ss_pred hhhhcCceeccc---c--ccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+++..+..++.. . +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 209 (501)
T 1uxt_A 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLD 209 (501)
T ss_dssp GGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHH
Confidence 887766654432 2 23678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++.+ +.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.+
T Consensus 210 aGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i 285 (501)
T 1uxt_A 210 AGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKI 285 (501)
T ss_dssp TTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred hCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHH
Confidence 999999999999976 88999999999999999999999999999864 89999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++++|||++++++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 286 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~g 365 (501)
T 1uxt_A 286 ARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365 (501)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCC-ceeecEEEeeCC---CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 311 GKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 311 g~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
|.. .| +|++|||+.+++ ++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++
T Consensus 366 G~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 442 (501)
T 1uxt_A 366 GRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLL 442 (501)
T ss_dssp CCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHC
T ss_pred Ccc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhC
Confidence 975 57 999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCc-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC-CCCC
Q 013526 387 RAGIIWINCY-FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF-NSPW 440 (441)
Q Consensus 387 ~~g~v~vN~~-~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~-~~~~ 440 (441)
++|+|+||++ ....+.+||||+|+||+|+++|.+++++||+.|+|++++. ..+|
T Consensus 443 ~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 443 EVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp CSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSS
T ss_pred CEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecCCCccc
Confidence 9999999998 5567899999999999999999999999999999998763 5555
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-90 Score=711.34 Aligned_cols=427 Identities=33% Similarity=0.519 Sum_probs=386.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 46 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~ 124 (508)
T 3r64_A 46 QASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASF 124 (508)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 557899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCceeccc--cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcC
Q 013526 76 ADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~ag 152 (441)
.++..+ ..+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++ .+|.+++.++|
T Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aG 203 (508)
T 3r64_A 125 PGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAG 203 (508)
T ss_dssp TTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTT
T ss_pred hhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhC
Confidence 876655 44432 356788999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ . +++|+++|+|||||+||++|||++.|++.+
T Consensus 204 lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i 282 (508)
T 3r64_A 204 VPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAA 282 (508)
T ss_dssp CCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred cCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHH
Confidence 9999999999977889999999999999999999999999999987 6 789999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 283 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 362 (508)
T 3r64_A 283 AVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362 (508)
T ss_dssp HHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
|.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 363 G~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 439 (508)
T 3r64_A 363 GPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGM 439 (508)
T ss_dssp CCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSE
T ss_pred CCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcce
Confidence 975 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||++... .+.+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 440 V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 440 VHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp EEECC--------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred EEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 999998764 6889999999999999999999999999999998763
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-90 Score=707.79 Aligned_cols=431 Identities=27% Similarity=0.445 Sum_probs=381.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 118 (485)
T 4dng_A 40 LATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTY 118 (485)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677776664 668899999999999999999999999999999999999975 45999999999999999
Q ss_pred hhhhcCceeccc--cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcC
Q 013526 76 ADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~ag 152 (441)
.+...+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++ .+|.+++.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aG 198 (485)
T 4dng_A 119 TGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAG 198 (485)
T ss_dssp GGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTT
T ss_pred HHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhC
Confidence 887666554432 356789999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++
T Consensus 199 lP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~ 277 (485)
T 4dng_A 199 LPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIF 277 (485)
T ss_dssp CCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHH
T ss_pred cCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHH
Confidence 9999999999977778999999999999999999999999999987 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 278 ~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~ 357 (485)
T 4dng_A 278 GKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357 (485)
T ss_dssp HHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+
T Consensus 358 ~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 434 (485)
T 4dng_A 358 R---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTH 434 (485)
T ss_dssp E---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred C---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence 6 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCC
Q 013526 393 INCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSP 439 (441)
Q Consensus 393 vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~ 439 (441)
||++... .+.+||||+|.||+|+++|.+++++||+.|+|++++...+
T Consensus 435 vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~ 482 (485)
T 4dng_A 435 VNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRK 482 (485)
T ss_dssp ESCC----------------------CHHHHHHHEEEEEEEEEC----
T ss_pred ECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecCCcC
Confidence 9998764 6889999999999999999999999999999998876543
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-89 Score=705.22 Aligned_cols=429 Identities=28% Similarity=0.453 Sum_probs=398.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|+++++.|+|||..++ ..|+..+++.++++++.
T Consensus 55 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 133 (500)
T 2j6l_A 55 QASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGL 133 (500)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 34666777665 3667899999999999999999999999999999999999975 67999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~ 150 (441)
.+++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 134 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~ 213 (500)
T 2j6l_A 134 SRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLED 213 (500)
T ss_dssp TTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHh
Confidence 877666544332 23445778999999999999999999999999999999999999999999999999888766 5
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+++++++ +.+.++.|+.||++|.|.||||+.+++.|++.++ .+.+|+++|+|||||+||++|||++.|++.+
T Consensus 214 aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i 291 (500)
T 2j6l_A 214 NKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSA 291 (500)
T ss_dssp TTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHH
T ss_pred hcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHH
Confidence 6999999999999 7788999999999999999999999999999988 7899999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++++|||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 292 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~g 371 (500)
T 2j6l_A 292 LFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371 (500)
T ss_dssp HHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH--Hhccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~--~~l~~ 388 (441)
|...+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++ .++++
T Consensus 372 g~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~ 451 (500)
T 2j6l_A 372 GKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDC 451 (500)
T ss_dssp CSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCS
T ss_pred CcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCe
Confidence 9864447899999999999999999999999999999999999999999999999999999999999999999 77999
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 452 G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 452 GIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp SEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred eEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999998765 3468999999999999999999999999999998763
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-89 Score=706.10 Aligned_cols=429 Identities=30% Similarity=0.510 Sum_probs=398.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 70 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 148 (516)
T 1uzb_A 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35667777666 3668899999999999999999999999999999999999975 57999999999999998
Q ss_pred hhhhcCceec--cccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
++++.+...+ ...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGl 228 (516)
T 1uzb_A 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGF 228 (516)
T ss_dssp HGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 8877654322 12345678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
|+|++|++++.+.+.+..|+.||++|.|.||||+.+++.|.+.++. ++++|+++|+|||||+||++|||++.|++
T Consensus 229 P~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~ 308 (516)
T 1uzb_A 229 PPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308 (516)
T ss_dssp CTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHH
T ss_pred CcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHH
Confidence 9999999999777889999999999999999999999999998762 56899999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|.|+||.|+++++||||++++++|+++|++.++++++|+| ++++++||++++.+++++++++++++++| +++
T Consensus 309 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~ 386 (516)
T 1uzb_A 309 GVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386 (516)
T ss_dssp HHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEE
T ss_pred HHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEE
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999999999999 899
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 387 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 466 (516)
T 1uzb_A 387 LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHV 466 (516)
T ss_dssp ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred ECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCE
Confidence 99976334699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||++.. ..+.+||||+|.||+|+ ++|.+++++||+.|+|++++
T Consensus 467 G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 516 (516)
T 1uzb_A 467 GNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred eEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEecC
Confidence 9999998755 35789999999999995 78999999999999998753
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-89 Score=702.55 Aligned_cols=424 Identities=32% Similarity=0.483 Sum_probs=397.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 36 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 114 (475)
T 1euh_A 36 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEE 114 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677776663 567899999999999999999999999999999999999974 67999999999999998
Q ss_pred hhhhcCceeccc-cc----ccc-ceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
++++.+...+.. .+ ... +.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~ 194 (475)
T 1euh_A 115 GLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA 194 (475)
T ss_dssp HTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH
T ss_pred HHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHH
Confidence 877665544432 23 355 889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.
T Consensus 195 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~ 271 (475)
T 1euh_A 195 EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKN 271 (475)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHH
Confidence 9999999999999976778999999999999999999999999999864 8999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.| ++++||++++.+++++++++++++++|+++++
T Consensus 272 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 350 (475)
T 1euh_A 272 IIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALT 350 (475)
T ss_dssp HHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECS
T ss_pred HHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|
T Consensus 351 gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G 427 (475)
T 1euh_A 351 EIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 427 (475)
T ss_dssp CCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSS
T ss_pred CCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEe
Confidence 9975 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~-~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
.|+||+ +....+.+||||+|+||+|+++|.+++++||+.|+|++++
T Consensus 428 ~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 428 TVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp EEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred eEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 999999 6666789999999999999999999999999999998763
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-89 Score=698.25 Aligned_cols=430 Identities=32% Similarity=0.492 Sum_probs=399.3
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+.
T Consensus 40 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~ 118 (486)
T 1t90_A 40 STKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAP 118 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4666777665 3668899999999999999999999999999999999999974 679999999999988766
Q ss_pred hhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 119 ~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 198 (486)
T 1t90_A 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPK 198 (486)
T ss_dssp HHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCT
T ss_pred HHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCC
Confidence 6655554332 234567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 199 gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 276 (486)
T 1t90_A 199 GVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF 276 (486)
T ss_dssp TSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH
Confidence 99999998 5678999999999999999999999999999987 789999999999999999999999999999999999
Q ss_pred hccCCCcccCce-EEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 236 FNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~-v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
.|+||.|+++++ +|||++ +++|+++|++.++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 277 ~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 355 (486)
T 1t90_A 277 GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN 355 (486)
T ss_dssp GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS
T ss_pred hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 999999999999 999999 999999999999999999999999999999999999999999999999999999999743
Q ss_pred C-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 315 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 315 ~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
. +.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+|
T Consensus 356 ~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~v 435 (486)
T 1t90_A 356 VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGI 435 (486)
T ss_dssp CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEE
T ss_pred CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 2 368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeCCCC
Q 013526 394 NCYFA-FDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 394 N~~~~-~~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
|++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+.++..+
T Consensus 436 N~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~~ 483 (486)
T 1t90_A 436 NLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAP 483 (486)
T ss_dssp SCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCCC
T ss_pred CCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCCC
Confidence 98644 3578999999999999 899999999999999999876543
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-89 Score=700.45 Aligned_cols=424 Identities=37% Similarity=0.602 Sum_probs=376.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 41 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 120 (478)
T 3ty7_A 41 KGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 356677776663 568899999999999999999999999999999999999986578999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 121 ~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~ 196 (478)
T 3ty7_A 121 LDNYEFEE----RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPK 196 (478)
T ss_dssp HHHCCSEE----EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCT
T ss_pred HHHhhccc----CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCc
Confidence 87765533 13467889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 197 gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 275 (478)
T 3ty7_A 197 GVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV 275 (478)
T ss_dssp TTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH
Confidence 9999999987789999999999999999999999999999887 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||....
T Consensus 276 ~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 355 (478)
T 3ty7_A 276 NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355 (478)
T ss_dssp GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999994322
Q ss_pred ---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 316 ---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 356 ~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 435 (478)
T 3ty7_A 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE 435 (478)
T ss_dssp TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
||+ ....+.+||||+|.||+|+++|.+++++||+.|+|+.
T Consensus 436 vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 436 INE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp ETT-CC----------------------CCGGGEEEEEEET
T ss_pred ECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999 5566789999999999999999999999999999863
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-88 Score=691.83 Aligned_cols=432 Identities=29% Similarity=0.458 Sum_probs=398.1
Q ss_pred CCCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 3 ILPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 3 ~~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
..++.+++++|++ |+.+++++|.++|+++++.|++|+++|++++++|+||+... ..|+..+++.+++++.
T Consensus 23 ~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~ 100 (474)
T 4h7n_A 23 IPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCG 100 (474)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHh
Confidence 3567788888774 45789999999999999999999999999999999998653 4699999999999988
Q ss_pred hhhhhcCce-ecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 75 AADKIHGEV-LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 75 ~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
...+..... .+. .++...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag 180 (474)
T 4h7n_A 101 LAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVP 180 (474)
T ss_dssp HHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCT
T ss_pred hhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhc
Confidence 776654332 222 134556778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++ +.+.+..|+.| +|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++
T Consensus 181 ~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~ 256 (474)
T 4h7n_A 181 ELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILW 256 (474)
T ss_dssp TTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHH
T ss_pred ccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHh
Confidence 99999999999 66778888876 899999999999999999988 789999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|++++|+|||++++++|+++|++.++++++|+|.++++++||++++.+++++++++++++++|+++++||.
T Consensus 257 ~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~ 336 (474)
T 4h7n_A 257 GAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336 (474)
T ss_dssp HHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred hhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 313 PIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 313 ~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 337 ~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v 416 (474)
T 4h7n_A 337 VEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAI 416 (474)
T ss_dssp CEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEE
T ss_pred ccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEE
Confidence 653 4789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC--CCCC
Q 013526 392 WINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF--NSPW 440 (441)
Q Consensus 392 ~vN~~~~--~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~--~~~~ 440 (441)
+||+... ..+..||||+|.||+| +++|.+|+++||++|+|+++.+ ..||
T Consensus 417 ~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 417 SINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp EESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred EECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 9999866 4578999999999998 7889999999999999999864 5565
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-87 Score=685.76 Aligned_cols=420 Identities=25% Similarity=0.376 Sum_probs=383.2
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.|++++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++..
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666664 5578999999999999999999999999999999999999866679999999888877665
Q ss_pred hhhcCc-ee---ccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 77 DKIHGE-VL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 77 ~~~~~~-~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
...... .. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 443221 11 1112446788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++. .+....|+.| ++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++
T Consensus 174 lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~ 250 (469)
T 3sza_A 174 LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAW 250 (469)
T ss_dssp SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHH
Confidence 999999999994 4556677788 7999999999999999999988 889999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||+++|++|+++|+++++++ .|+|.++++++||++++.+++++++++ +|+++++||.
T Consensus 251 ~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~ 324 (469)
T 3sza_A 251 GKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT 324 (469)
T ss_dssp HHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC
T ss_pred HHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc
Confidence 9999999999999999999999999999999999998 599999999999999999999999998 6899999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 325 ~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~ 403 (469)
T 3sza_A 325 GDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403 (469)
T ss_dssp EET-TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred cCC-CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 753 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 404 vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 404 ANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp ESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999864 4688999999999999999999999999999998864
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-87 Score=695.38 Aligned_cols=431 Identities=25% Similarity=0.410 Sum_probs=398.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|++ |+.++.++|.++|+++++.|+++ +++|+.++++|+|||..++...++..+++.+++++.
T Consensus 96 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~ 175 (563)
T 4e3x_A 96 YADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAK 175 (563)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 467788888875 55789999999999999999999 999999999999999997543349999999999999
Q ss_pred hhhhhcCce-eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.++++.+.. ...+.+...+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGl 254 (563)
T 4e3x_A 176 FAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGL 254 (563)
T ss_dssp HHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTC
T ss_pred HHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCC
Confidence 988776532 2222234466778888999999999999999999999999 59999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCC------ceeeecCCCCceeecCCCCHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAA 227 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iV~~dad~~~aa 227 (441)
|+|+||++++++.+.++.|+.||+++.|.||||+.+++.|.+.++ .+++ |+++|+|||||+||++|||++.|+
T Consensus 255 P~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa 333 (563)
T 4e3x_A 255 PPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVV 333 (563)
T ss_dssp CTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHH
T ss_pred CCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHH
Confidence 999999999988888999999999999999999999999999988 6666 499999999999999999999999
Q ss_pred HHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHH-cCC
Q 013526 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGA 305 (441)
Q Consensus 228 ~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga 305 (441)
+.+++++|.|+||.|++++|+|||+++|++|+++|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+
T Consensus 334 ~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga 413 (563)
T 4e3x_A 334 SGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413 (563)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999999999999999999996 899
Q ss_pred eEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHH
Q 013526 306 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTV 382 (441)
Q Consensus 306 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~ 382 (441)
++++||......|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||+++|||+|.+.++++
T Consensus 414 ~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~ 493 (563)
T 4e3x_A 414 SILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEA 493 (563)
T ss_dssp EEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHH
T ss_pred EEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHH
Confidence 99999987666899999999999999999999999999999999997 79999999 7899999999999999999999
Q ss_pred HHhcc--ceEEEEcCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC
Q 013526 383 SRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 383 ~~~l~--~g~v~vN~~~~--~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+++++ +|+|+||+.++ ..+.+||||+|.||+| +.+|++++++|++.|+|..++.
T Consensus 494 ~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 494 TRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp HHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred HHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 99976 99999999865 3578999999999998 7999999999999999998875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=671.26 Aligned_cols=418 Identities=27% Similarity=0.415 Sum_probs=386.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 24 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 103 (457)
T 3lns_A 24 YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH 103 (457)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777774 457899999999999999999999999999999999999985546999999999999988
Q ss_pred hhhhcCc-eecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc
Q 013526 76 ADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151 (441)
Q Consensus 76 ~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a 151 (441)
++++... ..+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (457)
T 3lns_A 104 LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183 (457)
T ss_dssp HHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 7765432 2221 13456789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
+|+|++|++++ +.+.+..|+. +++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 184 -lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~ 259 (457)
T 3lns_A 184 -FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLM 259 (457)
T ss_dssp -CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHH
T ss_pred -CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHH
Confidence 99999999999 6788899988 68999999999999999999988 88999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||++++++|+++|++.+++++ |.++ ++||++++.++++++++++++. +++++||
T Consensus 260 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg 331 (457)
T 3lns_A 260 FGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGS 331 (457)
T ss_dssp HHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECC
T ss_pred HHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCC
Confidence 999999999999999999999999999999999999987 6665 9999999999999999999863 5999999
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ ++|||++||||+|.+.++++++++++|+
T Consensus 332 ~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 410 (457)
T 3lns_A 332 QADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD 410 (457)
T ss_dssp CEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSE
T ss_pred ccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcce
Confidence 7643 7899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EEEcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 391 IWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 391 v~vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus 411 v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 411 AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999854 568899999999999999999999999999998763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-86 Score=676.69 Aligned_cols=422 Identities=26% Similarity=0.374 Sum_probs=392.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 38 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~ 116 (490)
T 3ju8_A 38 GADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQA 116 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777664 557899999999999999999999999999999999999975 57999999999999988
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 196 (490)
T 3ju8_A 117 FRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPA 196 (490)
T ss_dssp HHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCT
T ss_pred HHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCc
Confidence 87776654432234456777999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCce-eeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~-~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
|++|++++ +.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+ ++|+|||||+||++|||++.|++.+++++
T Consensus 197 gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 274 (490)
T 3ju8_A 197 GVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSA 274 (490)
T ss_dssp TTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHH
T ss_pred CeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999 6788999999999999999999999999999987 788998 79999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCcc-HHHHHHHHHHHHhccccCC-CCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 235 LFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
|+|+||.|++++++|||+++ +++|+++|+++++++++|+ |.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 275 ~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~ 354 (490)
T 3ju8_A 275 FISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT 354 (490)
T ss_dssp HGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 99999999999999999996 9999999999999999999 999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..+..|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 355 ~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 433 (490)
T 3ju8_A 355 QPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVN 433 (490)
T ss_dssp CCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred ccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence 765689999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++.. ..+.+||||+|.||.+ ++++||+.|+|++..
T Consensus 434 vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 434 WNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred ECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999876 4578999999999974 588999999988764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=716.67 Aligned_cols=430 Identities=31% Similarity=0.490 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|+.++++|+|||..+ +..|+..+++.+++++..
T Consensus 564 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~e-a~~Ev~~aid~lr~~a~~ 642 (1026)
T 4f9i_A 564 QAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYARE 642 (1026)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh-HHHHHHHHHHHHHHHHHH
Confidence 467778877774 55789999999999999999999999999999999999997 567999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+..++..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 643 ~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP 722 (1026)
T 4f9i_A 643 MIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLP 722 (1026)
T ss_dssp HHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcC
Confidence 88776543322 35667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
+|+||++++++.+.+..|+.||+++.|+||||+.+++.|.+.++. ++.+|+++|+|||||+||++|||++.|++.
T Consensus 723 ~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~ 802 (1026)
T 4f9i_A 723 EGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPH 802 (1026)
T ss_dssp TTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHH
T ss_pred CCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHH
Confidence 999999999888899999999999999999999999999998862 367999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||++++++|+++|++.++++++|+|.|+++++||++++.+++++.++|++++.+| ++++
T Consensus 803 iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~ 881 (1026)
T 4f9i_A 803 VLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLY 881 (1026)
T ss_dssp HHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEE
T ss_pred HHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||..+...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|
T Consensus 882 gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG 961 (1026)
T 4f9i_A 882 ESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVG 961 (1026)
T ss_dssp ECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCS
T ss_pred cCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEe
Confidence 99865545999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||+.++ ..+.+||||+|.||+|. .+|++++++|++.|+|++++
T Consensus 962 ~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 962 NLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp EEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred eEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 999999876 34789999999999995 78999999999999999875
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-83 Score=695.05 Aligned_cols=425 Identities=27% Similarity=0.418 Sum_probs=396.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..+ +..|+..+++.+++++..
T Consensus 546 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~e-a~~Ev~~ai~~lr~~a~~ 624 (1001)
T 3haz_A 546 DATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD-ALSELREAADFCRYYAAQ 624 (1001)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHH
Confidence 467778877774 56789999999999999999999999999999999999997 567999999999999999
Q ss_pred hhhhcCce--eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+++..+.. .+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+
T Consensus 625 a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGl 704 (1001)
T 3haz_A 625 GRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGI 704 (1001)
T ss_dssp HHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred HHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCc
Confidence 88766543 3334567788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+||++++++.+ +..|+.||++|.|+||||+.+++.|.+.++.. ..+|+++|+|||||+||++|||++.|++.++
T Consensus 705 P~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv 783 (1001)
T 3haz_A 705 PKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783 (1001)
T ss_dssp CTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence 99999999997777 99999999999999999999999999988743 4799999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||++++++|+++|++.++++++|+|.++++++||++++.+++++.++|++++.+| ++ +||
T Consensus 784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg 861 (1001)
T 3haz_A 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFA 861 (1001)
T ss_dssp HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEE
T ss_pred HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 88 888
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
..+. .|+|+.|||+.+ +++.++++|+||||++|++|++ ++|||+++|+++|||+++|||+|.+.++++++++++|
T Consensus 862 ~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG 938 (1001)
T 3haz_A 862 GPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVG 938 (1001)
T ss_dssp CCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCS
T ss_pred ccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCee
Confidence 7654 699999999974 6789999999999999999996 8999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||+..+. .+.+||||+|.||+| ..+|++++++||+.|+|+++.
T Consensus 939 ~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 939 NIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred eEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999998763 367899999999999 578999999999999999875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-83 Score=664.73 Aligned_cols=414 Identities=22% Similarity=0.330 Sum_probs=375.7
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-------eeccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS 87 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~ 87 (441)
.|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..++++.+. ..+..
T Consensus 59 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~ 137 (534)
T 2y53_A 59 ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLS 137 (534)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECS
T ss_pred hhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhccccccccCCccccCC
Confidence 5778999999999999999999999999999999999999975 469999999999999887665431 12221
Q ss_pred -cc-cccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEeC
Q 013526 88 -RA-LQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPG 163 (441)
Q Consensus 88 -~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~~ 163 (441)
.+ ...+..++|+ |||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||++++
T Consensus 138 ~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g 217 (534)
T 2y53_A 138 KDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG 217 (534)
T ss_dssp TTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCS
T ss_pred CCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeC
Confidence 11 1357889997 99999999999999999999999999999999999999999999999999999 79999999998
Q ss_pred CchhHHHHHHhC-CCcCEEEEeCCcHHHHHHHHHHh-hcCCCceeeecCCCCceeecCCC-----CHHHHHHHHHHHHhh
Q 013526 164 FGPTAGAAIASH-MDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILF 236 (441)
Q Consensus 164 ~~~~~~~~l~~~-~~v~~v~ftGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iV~~da-----d~~~aa~~i~~~~~~ 236 (441)
.+.+ +..+ +++|.|.||||+.+++.|.+.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.
T Consensus 218 ~~~~----l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~ 293 (534)
T 2y53_A 218 SSAG----LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV 293 (534)
T ss_dssp CCTT----SGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHG
T ss_pred ChHH----HHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHh
Confidence 5543 3333 67999999999999999998763 36789999999999999999999 999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC-
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 315 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~- 315 (441)
|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||....
T Consensus 294 n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~ 372 (534)
T 2y53_A 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPL 372 (534)
T ss_dssp GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCC
T ss_pred CCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 68999999997431
Q ss_pred -----CCCceeecEEEeeCCCC--ccccccccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013526 316 -----KKGYYIEPTIFTNVTED--MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVAN 380 (441)
Q Consensus 316 -----~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~s~d~~~~~ 380 (441)
..|+|++|||+.+++++ |++++||+||||++|++|+ |+ +|||+++|+++|||++||||+|.++++
T Consensus 373 ~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 452 (534)
T 2y53_A 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLG 452 (534)
T ss_dssp BSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHH
T ss_pred ccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 36899999999999887 6899999999999999999 99 999999999999999999999999999
Q ss_pred HHHHhc--cceEEEEcCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhhccEEEEe
Q 013526 381 TVSRSI--RAGIIWINCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 381 ~~~~~l--~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~-~g~~~l~~~t~~k~v~~~ 434 (441)
++++++ ++|+|+||++.. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 453 ~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 453 RLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp HHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred HHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 999999 899999998642 357899999999999998 699999999999998763
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-80 Score=640.90 Aligned_cols=414 Identities=22% Similarity=0.278 Sum_probs=372.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~a~~ 137 (528)
T 3v4c_A 59 VGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADH 137 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 456777777663 56789999999999999999999999999999999999996 457999999999999988
Q ss_pred hhhh--cCceec----c---ccccccceeecccceEEEECCCccchHhhH--HHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 76 ADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 76 ~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
+++. .+...+ . ..+...+.+++|+|||++|+|||||+...+ +++++||++||+||+|||+.+|+++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 217 (528)
T 3v4c_A 138 IEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIV 217 (528)
T ss_dssp HHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 8762 222221 1 123456889999999999999999999865 8999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC--CceeeecCCCCceeec
Q 013526 145 AHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIF 218 (441)
Q Consensus 145 ~~~l----~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iV~ 218 (441)
++++ .++|+|+|+||++++.+.+.+..|+.||++|.|.||||+.+++.|.+.++ .++ +|+++|+|||||+||+
T Consensus 218 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~ 296 (528)
T 3v4c_A 218 AEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLL 296 (528)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEEC
T ss_pred HHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEEC
Confidence 8875 56899999999999988889999999999999999999999999999987 777 8999999999999999
Q ss_pred CCC---CHHHHHHHHHHHHhhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHH
Q 013526 219 DDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 294 (441)
Q Consensus 219 ~da---d~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 294 (441)
+|| |++.|++.+++++|.|+||.|++++++|||++ +|++|+++|++++++++.| +.+||++++.+.+++.
T Consensus 297 ~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~ 370 (528)
T 3v4c_A 297 PEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQA 370 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHH
T ss_pred CCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHH
Confidence 999 88999999999999999999999999999998 9999999999999998643 5789999888887777
Q ss_pred HHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCC---ccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013526 295 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 371 (441)
Q Consensus 295 ~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v 371 (441)
+++. .+|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 371 ~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v 444 (528)
T 3v4c_A 371 RFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATI 444 (528)
T ss_dssp HHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEE
T ss_pred HHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEE
Confidence 7653 479999999975 7999999999988877 899999999999999999999999999999999999999
Q ss_pred ecC--CHHHHHHHHHhcc--ceEEEEcCcCC---CCCCCCccC-CCCCCCCCcc--hHHHHHhhhhccEE
Q 013526 372 MTK--DLNVANTVSRSIR--AGIIWINCYFA---FDSDCPYGG-YKMSGFGRDC--GLESLHNYLQVKSV 431 (441)
Q Consensus 372 ~s~--d~~~~~~~~~~l~--~g~v~vN~~~~---~~~~~p~GG-~~~SG~g~~~--g~~~l~~~t~~k~v 431 (441)
||+ |.+++++++++++ +|+|+||++++ ..+.+|||| +|.||+|+++ |++|+++||++|++
T Consensus 445 ~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp ECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred EcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 999 8899999999998 99999999765 358899999 9999999875 99999999999874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-80 Score=635.71 Aligned_cols=413 Identities=20% Similarity=0.264 Sum_probs=371.0
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++++++.
T Consensus 26 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~Ev~~~~~~~~~~a~~ 104 (510)
T 1ez0_A 26 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADV 104 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356777777663 55789999999999999999999999999999999999986 567999999999999988
Q ss_pred hhh--hcCceec----c--ccc-cccceeecccceEEEECCCccchHhh--HHHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 76 ADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 76 ~~~--~~~~~~~----~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
+++ ..+..++ . +.+ ...+.+++|+|||++|+|||||++.. .+++++||++||+||+|||+.+|+++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 184 (510)
T 1ez0_A 105 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 184 (510)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 865 3333221 1 111 23578999999999999999999985 49999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC--CceeeecCCCCceeec
Q 013526 145 AHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIF 218 (441)
Q Consensus 145 ~~~l----~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iV~ 218 (441)
++++ .++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|++.++ .++ +|+++|+|||||+||+
T Consensus 185 ~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~ 263 (510)
T 1ez0_A 185 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIF 263 (510)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEEC
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEe
Confidence 9987 56799999999999977788999999999999999999999999999987 564 9999999999999999
Q ss_pred CCCCHH--HHHHHHHHHHhhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHH
Q 013526 219 DDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295 (441)
Q Consensus 219 ~dad~~--~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 295 (441)
+|||++ .|++.+++++|+|+||.|++++++|||++ ++++|+++|++.++++++ ||++++.+.+++.+
T Consensus 264 ~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~ 333 (510)
T 1ez0_A 264 PSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQS 333 (510)
T ss_dssp HHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHH
Confidence 999999 99999999999999999999999999999 999999999999999863 57888889999999
Q ss_pred HHHHHHH-cCCeEecCCCcCCCCCceeecEEEeeCCCC---ccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013526 296 YIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 371 (441)
Q Consensus 296 ~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v 371 (441)
+++++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|+++|||++||
T Consensus 334 ~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v 409 (510)
T 1ez0_A 334 QVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATI 409 (510)
T ss_dssp HHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEE
T ss_pred HHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEE
Confidence 9999984 7999999997 3899999999988777 999999999999999999999999999999999999999
Q ss_pred ecCCH--HHHHHHHHhc--cceEEEEcCcCC---CCCCCCccC-CCCCCCCC--cchHHHHHhhhhccEEE
Q 013526 372 MTKDL--NVANTVSRSI--RAGIIWINCYFA---FDSDCPYGG-YKMSGFGR--DCGLESLHNYLQVKSVV 432 (441)
Q Consensus 372 ~s~d~--~~~~~~~~~l--~~g~v~vN~~~~---~~~~~p~GG-~~~SG~g~--~~g~~~l~~~t~~k~v~ 432 (441)
||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||.|. .+|.+++++|++.|.+.
T Consensus 410 ~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 410 HATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp ECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 99987 7899999999 799999999865 357899999 79999875 47999999999988754
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-75 Score=593.86 Aligned_cols=407 Identities=20% Similarity=0.222 Sum_probs=354.1
Q ss_pred CHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhh
Q 013526 6 SRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 77 (441)
Q Consensus 6 ~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~ 77 (441)
+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+||+..++...+...+++.+..+....+
T Consensus 10 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~~ 89 (464)
T 3k9d_A 10 SIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMK 89 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhccc
Confidence 345555555 366889999999999999999999999999999999999987543344444444433322211
Q ss_pred hhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHH----HHHHHcCC
Q 013526 78 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----HLAKLAGV 153 (441)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~----~~l~~agl 153 (441)
..+ ......+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+
T Consensus 90 -~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~ 167 (464)
T 3k9d_A 90 -TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167 (464)
T ss_dssp -CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred -ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCC
Confidence 111 122234667888999999999999999999999999999999999999999999999998765 45688999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecC-CCCceeecCCCCHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~g-g~~~~iV~~dad~~~aa~~i~~ 232 (441)
|+|+++++++++.+.++.|+.||++|.|+||||+.. .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++
T Consensus 168 P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~ 241 (464)
T 3k9d_A 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILD 241 (464)
T ss_dssp CTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHH
Confidence 999999999988889999999999999999999984 34444 788999 6777 9999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHH-------hccccCCCC-CCCCCcccccCHHHHHHHHHHHHHHHHcC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG 304 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 304 (441)
++|+|+||.|+++++||||+++|++|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|
T Consensus 242 ~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~g 321 (464)
T 3k9d_A 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPAD 321 (464)
T ss_dssp HHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTT
T ss_pred HHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCC
Confidence 9999999999999999999999999999999986 456788887 77899999999999999999999999999
Q ss_pred CeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEecCCHHHHH
Q 013526 305 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMTKDLNVAN 380 (441)
Q Consensus 305 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~ 380 (441)
+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++|||+|.+.++
T Consensus 322 a~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~ 386 (464)
T 3k9d_A 322 ARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIR 386 (464)
T ss_dssp CCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHH
T ss_pred CEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHH
Confidence 999999863 456777765 89999999999999999997 79999999999999999999999
Q ss_pred HHHHhccceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 381 TVSRSIRAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 381 ~~~~~l~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
++++++++|+|+||++.. ..+.+|||| |.+|.|.++|..++++|++.|+|.+...
T Consensus 387 ~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 387 EFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp HHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred HHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 999999999999999865 468899998 7899999999999999999999987654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-76 Score=598.41 Aligned_cols=381 Identities=15% Similarity=0.154 Sum_probs=311.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhhccHHH-HHHHHHHHHHhhhhhc------Cce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYAGAADKIH------GEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~ 83 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++++++.++... +..
T Consensus 29 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~ 108 (468)
T 1vlu_A 29 ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKV 108 (468)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCee
Confidence 5889999999999999999999999999999999999998 7654468888 8888888888776654 443
Q ss_pred eccc---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H----cC
Q 013526 84 LKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L----AG 152 (441)
Q Consensus 84 ~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~----ag 152 (441)
.+.. .+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++. + +|
T Consensus 109 ~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aG 186 (468)
T 1vlu_A 109 KMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETG 186 (468)
T ss_dssp EEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcC
Confidence 3321 2455789999999999999999 9 9999999999999999999999999999999999995 8 99
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|+++ .+.+.++.|..||++|.|.||||+.+++.|.+.+ .+|+++|+|||||+||++|||++.|++.+++
T Consensus 187 lP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~ 261 (468)
T 1vlu_A 187 VPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLD 261 (468)
T ss_dssp CCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHH
Confidence 9999999999 6667889999999999999999999999998864 6999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCcccccCHHHHHHHHHH-HHHHHHcCCeEe
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSY-IEHGKREGATLL 308 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~ 308 (441)
++|.|+| .|+++++||||+++ ++|+++|++.++++++ |+|.+ +++ +++++ +++
T Consensus 262 ~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~ 318 (468)
T 1vlu_A 262 AKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELG 318 (468)
T ss_dssp TTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHT
T ss_pred HhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eee
Confidence 9999999 99999999999999 9999999999999987 77542 344 56555 467
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++
T Consensus 319 ~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 389 (468)
T 1vlu_A 319 KLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDS 389 (468)
T ss_dssp CCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCC
T ss_pred ccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCe
Confidence 7775 4 789997 788999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFAFDSDCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~G-----G~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||++....+..||| |+|.||+|++ |.+++++||+.|+|+++.
T Consensus 390 G~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 390 SGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp SEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred eEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 999999988777889999 9999999999 999999999999998864
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-73 Score=582.12 Aligned_cols=372 Identities=17% Similarity=0.158 Sum_probs=320.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCChhh---hhhccHHHHHHHHHHHHHhhhhhcCcee
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDA-------GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVL 84 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~ 84 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+ |||..+ .+..|+..+++.++++++.+++..+...
T Consensus 44 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~ 123 (463)
T 2h5g_A 44 MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVL 123 (463)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCccc
Confidence 467899999999999999999999999999999999 699873 1346999999999999988777666544
Q ss_pred ccc---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----CCCCCc
Q 013526 85 KMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGV 157 (441)
Q Consensus 85 ~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a----glP~~~ 157 (441)
+.. .+...+.+++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++..|++++.++ | |+|+
T Consensus 124 ~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gv 200 (463)
T 2h5g_A 124 RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEA 200 (463)
T ss_dssp EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGG
T ss_pred ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCe
Confidence 322 3445688999999999999887 87776 79999999999999999999999999999999999 8 9999
Q ss_pred EEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhc
Q 013526 158 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 237 (441)
Q Consensus 158 v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~ 237 (441)
||++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 201 v~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n 276 (463)
T 2h5g_A 201 VQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY 276 (463)
T ss_dssp EEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC
T ss_pred EEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC
Confidence 999999 6678999999999999999999999999999864 899999999999999999999999999999999999
Q ss_pred cCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCC
Q 013526 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 317 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 317 (441)
||.|+++++||||+++|+ ||+ +.+++++++++|++++.|+... ..
T Consensus 277 -GQ~C~a~~rvlV~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~ 321 (463)
T 2h5g_A 277 -PAACNALETLLIHRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SY 321 (463)
T ss_dssp -TTSTTSEEEEEEEGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C-
T ss_pred -CCccccCcEEEEeccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-cc
Confidence 999999999999999998 343 2345788888999998554321 23
Q ss_pred CceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcC
Q 013526 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397 (441)
Q Consensus 318 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~ 397 (441)
++|+ +++|++++||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|+|+||++.
T Consensus 322 g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 393 (463)
T 2h5g_A 322 LTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNAST 393 (463)
T ss_dssp ----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCG
T ss_pred CccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCc
Confidence 4443 57899999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhccEEEEeCC
Q 013526 398 AFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 398 ~~~~~~p~GG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~~~ 436 (441)
...+.+||||+|+||+| ++ +|.+++++||+.|+|+++..
T Consensus 394 ~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 394 RFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp GGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred cCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 77788999999999999 54 89999999999999988753
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-73 Score=570.84 Aligned_cols=372 Identities=19% Similarity=0.213 Sum_probs=328.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhh-------hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+||+. .++. ..|+..+++.+++++++.+. .+..
T Consensus 29 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~ 107 (427)
T 1o20_A 29 VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEV 107 (427)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCcc
Confidence 4778999999999999999999999999999999999885 4332 25899999999999987764 3443
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~aglP~~ 156 (441)
.+. +.+...+.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..|++++. ++|+|+|
T Consensus 108 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~g 185 (427)
T 1o20_A 108 IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPES 185 (427)
T ss_dssp EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGG
T ss_pred ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 332 12445688999999999999875 47888999999999999999999999999999999998 6799999
Q ss_pred cEEEEeCC-chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
++|++++. ..+.+..|..||++|.|.||||+.+++.|.+.+ .+|+++|+|||||+||++|||++.|++.+++++|
T Consensus 186 vv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f 261 (427)
T 1o20_A 186 SVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT 261 (427)
T ss_dssp GEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc
Confidence 99999984 456788888899999999999999999998875 5999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+| .|++++++|||+++||+|+++|++.+++++++ ++||...
T Consensus 262 ~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~- 304 (427)
T 1o20_A 262 QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT- 304 (427)
T ss_dssp SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH-
T ss_pred cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh-
Confidence 9999 99999999999999999999999999987653 1122211
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
.+ |+ ||| ++.++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus 305 -~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~ 378 (427)
T 1o20_A 305 -RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNA 378 (427)
T ss_dssp -HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESS
T ss_pred -hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECC
Confidence 12 33 886 2457889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeCC
Q 013526 396 YFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+....+..||||.|+||+| +++|++++++||+.|+|+++..
T Consensus 379 ~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 379 STRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred CCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 8777788999999999987 4679999999999999988764
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=573.10 Aligned_cols=374 Identities=20% Similarity=0.213 Sum_probs=317.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+++.+++++.+.+.. +..
T Consensus 41 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~ 119 (444)
T 4ghk_A 41 SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEM 119 (444)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCE
T ss_pred HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-Ccc
Confidence 36688999999999999999999999999999999999853 3221 37899999999998877542 443
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~ 156 (441)
.+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++ .++|+|+|
T Consensus 120 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~g 197 (444)
T 4ghk_A 120 SNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQD 197 (444)
T ss_dssp EEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcc
Confidence 332 23566789999999999999998 8 588899999999999999999999999999999997 79999999
Q ss_pred cEEEEeCCch-hHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
+++++++.+. ..+..|..||++|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 198 vv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~ 273 (444)
T 4ghk_A 198 TVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT 273 (444)
T ss_dssp GEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----
T ss_pred cEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc
Confidence 9999998554 4778888899999999999999999998764 6999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
.|+| .|+++++||||+++|++|+++|++.++++++ |+|. ..++++++.
T Consensus 274 ~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~----------- 324 (444)
T 4ghk_A 274 HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG----------- 324 (444)
T ss_dssp ------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT-----------
T ss_pred CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc-----------
Confidence 9999 9999999999999999999999999999887 6542 134555432
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 325 ----~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~ 392 (444)
T 4ghk_A 325 ----VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVM 392 (444)
T ss_dssp ----CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred ----cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEE
Confidence 11 11 3467899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
||++....+..||||.++||+| +++|++++++||+.|+|+++.+
T Consensus 393 vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 393 VNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp EEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred EcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 9999887888999999999988 5789999999999999988754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-71 Score=565.39 Aligned_cols=402 Identities=20% Similarity=0.245 Sum_probs=325.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH-HHHH
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR-YYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~-~~~~ 74 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+.+.+. +++.
T Consensus 3 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~ 82 (452)
T 3my7_A 3 VTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD 82 (452)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 467777777764 5678999999999999999999999999999999999999865456766666663 3322
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L 150 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~ 150 (441)
.+..+ .++...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 83 --~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~ 159 (452)
T 3my7_A 83 --EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159 (452)
T ss_dssp --CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHH
T ss_pred --ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHH
Confidence 11111 2222345567889999999999999999999999999999999999999999999999988887765 7
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++++.+.++.|+.||+++.|.||||+..++ .++ +.++|+++|+|||+|+||++|||++.|++.+
T Consensus 160 aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~i 234 (452)
T 3my7_A 160 AGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASV 234 (452)
T ss_dssp TTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHH
T ss_pred cCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHH
Confidence 89999999999998888999999999999999999998643 333 7889999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|+|+||.|+++++||||+++||+|+++|+++ .||++++.++++++++++++...|+++ +|
T Consensus 235 v~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G 298 (452)
T 3my7_A 235 LMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VG 298 (452)
T ss_dssp HHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TT
T ss_pred HHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ec
Confidence 99999999999999999999999999999999875 389999999999999998776677776 47
Q ss_pred CCcC---CCCCceeecEE-------EeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEecCCH
Q 013526 311 GKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIMTKDL 376 (441)
Q Consensus 311 g~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~ 376 (441)
|... ...|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++. |||+++|||+|.
T Consensus 299 ~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~ 377 (452)
T 3my7_A 299 QPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQD 377 (452)
T ss_dssp CCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTT
T ss_pred CccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCH
Confidence 6542 13689999997 567888999876 89999999999999999999999974 999999999998
Q ss_pred HHHHH---HHHhccceEEEEcCcCCCCCCCCccCCCCC-----------CCCCcchHH-----HHHhhhhccEEEEeCC
Q 013526 377 NVANT---VSRSIRAGIIWINCYFAFDSDCPYGGYKMS-----------GFGRDCGLE-----SLHNYLQVKSVVTPIF 436 (441)
Q Consensus 377 ~~~~~---~~~~l~~g~v~vN~~~~~~~~~p~GG~~~S-----------G~g~~~g~~-----~l~~~t~~k~v~~~~~ 436 (441)
+.+++ +++++++|+|+||++.. |||.|.. |+|..+|.. +.+++...|+|..+..
T Consensus 378 ~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 378 VNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp TCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEECCC-
T ss_pred HHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 87777 99999999999999754 5554432 445555444 5566666676665544
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=98.25 E-value=0.0017 Score=63.21 Aligned_cols=339 Identities=17% Similarity=0.169 Sum_probs=184.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-Ch---hh--hhhccH---------------HHHH
Q 013526 8 QHVRRLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGK-LH---SW--AKMGDI---------------PGAA 66 (441)
Q Consensus 8 ~~~~~a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~~---~~--~~~~ev---------------~~~~ 66 (441)
+++++.+.+...+..+-.+....+.+.++++-|+=+...++..-+ .. .+ ....|+ ..+.
T Consensus 19 ~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~ 98 (423)
T 4gic_A 19 SQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAA 98 (423)
T ss_dssp HHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHH
Confidence 366777767666666666777777777777766655555554321 10 00 011123 2233
Q ss_pred HHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCC---ccchHhhHHHHHHHHhhCCeE-EE-eCCCcchHHH
Q 013526 67 NTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTM-IV-KPAEQTPLIA 141 (441)
Q Consensus 67 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~AL~aGn~v-v~-kps~~~~~~~ 141 (441)
+.++.|..... .........+|......+.|+--|.++.|. .||-.. +...+||-.+|..= |+ .|++.. ...
T Consensus 99 ~~I~~fh~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G-~i~ 175 (423)
T 4gic_A 99 ERIRAYAERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRG-ELN 175 (423)
T ss_dssp HHHHHHHHHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGG-CCC
T ss_pred HHHHHHHHhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCC-Ccc
Confidence 33333332111 111122334677778899999999999994 355433 44589999999973 33 343321 122
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceee
Q 013526 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 217 (441)
Q Consensus 142 ~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV 217 (441)
..+.-+...+|.. .+..-.|.....+|.- -|.||.|+=.|..-++.. +... ....-+=+ ..|.+=+.|
T Consensus 176 p~iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm-~AGPSEilV 247 (423)
T 4gic_A 176 ALVLAAAYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDM-VAGPSEILV 247 (423)
T ss_dssp HHHHHHHHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECC-CCCCCEEEE
T ss_pred HHHHHHHHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCccc-ccccceEEE
Confidence 2333344456654 3444346555555554 678999999999876542 2222 11111112 233333333
Q ss_pred --cCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHH
Q 013526 218 --FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295 (441)
Q Consensus 218 --~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 295 (441)
++++|.+..|..++.-+=+.. ..+.++|..+ ++|.+++.+.+.+..-.-| .. +.+
T Consensus 248 iAD~~a~p~~vAaDLlsQAEHd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i~-- 304 (423)
T 4gic_A 248 ISDGRTDPDWIAMDLFSQAEHDE-----DAQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EVI-- 304 (423)
T ss_dssp EECSCSCHHHHHHHHHHHHTTCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HHH--
T ss_pred EeCCCCCHHHHHHHHHHhhccCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HHH--
Confidence 456899999998887654433 2456777766 4555555555543211111 11 111
Q ss_pred HHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013526 296 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375 (441)
Q Consensus 296 ~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 375 (441)
..+..+ + -.++.++|++|+++++|..- .-..-|.++|
T Consensus 305 --~~sl~~-------------------------------------~---g~ii~v~~~~ea~~~~N~~A-PEHLel~~~~ 341 (423)
T 4gic_A 305 --RTSLER-------------------------------------R---GGMILVDDLEQAAAVANRIA-PEHLELSVES 341 (423)
T ss_dssp --HHHHHH-------------------------------------H---CEEEECSSHHHHHHHHHHHC-CSEEEEESSC
T ss_pred --HHHHhc-------------------------------------C---ceEEEEeehHHHHHHHHhhC-hHHhhhhhCC
Confidence 112211 1 12446799999999999842 2356788888
Q ss_pred HHHHHHHHHhcc-ceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 376 LNVANTVSRSIR-AGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 376 ~~~~~~~~~~l~-~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
+ ..+..+++ +|.|++..++. .+..+|. +|..++.+.-+...|.++-++
T Consensus 342 ~---~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 342 P---EVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp H---HHHGGGCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred H---HHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 7 45777775 99999987654 1233455 445555555567777775443
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.045 Score=53.40 Aligned_cols=261 Identities=20% Similarity=0.205 Sum_probs=151.4
Q ss_pred cccccceeecccceEEEECCC---ccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 88 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 88 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
.|......+.|+.-|.++.|. -||- +.+...+||-.+|+.=|+--+|-. ....+.-+...+|.. .+..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~----eIy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQ----DVFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCC----EEEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCC----EEeecc
Confidence 466777889999999999995 3553 344468999999997665333311 112233334556655 333333
Q ss_pred chhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceee--cCCCCHHHHHHHHHHHHhhcc
Q 013526 165 GPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI--FDDVDVNTAADMALLGILFNK 238 (441)
Q Consensus 165 ~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV--~~dad~~~aa~~i~~~~~~~~ 238 (441)
|.....+|.- -|.||.|.=.|..-+...=+.... ..+.--+=-..|.+=+.| ++++|.+..|..++.-+=+..
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 5555455543 588999998888765432221100 111111112234443333 456899999998887654333
Q ss_pred CCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCC
Q 013526 239 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 318 (441)
Q Consensus 239 Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 318 (441)
..+.++|..+ ++|.+++.+.+.+..-.-| .. +.++.++
T Consensus 265 -----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r~-------~ia~~sl----------------- 302 (434)
T 1kae_A 265 -----DSQVILLTPA--ADMARRVAEAVERQLAELP-----------RA-------ETARQAL----------------- 302 (434)
T ss_dssp -----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------TH-------HHHHHHH-----------------
T ss_pred -----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------hH-------HHHHHHH-----------------
Confidence 2456677666 3455555444433210001 11 1111111
Q ss_pred ceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceEEEEcCcC
Q 013526 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINCYF 397 (441)
Q Consensus 319 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~vN~~~ 397 (441)
..- .|+.++|++||++++|..- .-..-|.++|+ ..+..+++ +|.|++..++
T Consensus 303 -----------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I~nAGaIFlG~~t 354 (434)
T 1kae_A 303 -----------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSITSAGSVFLGDWS 354 (434)
T ss_dssp -----------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGCCSCSEEEESTTC
T ss_pred -----------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhcCcccchhcCCCC
Confidence 112 4667899999999999842 23677889887 46677775 8999999875
Q ss_pred C---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 398 A---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 398 ~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
. .+..+|-+| ..++.+.-+.+.|+++-++
T Consensus 355 pe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 355 PESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp CHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred chhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 5 234566655 4444445566777776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 441 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-158 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-156 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-129 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-113 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 8e-92 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-91 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-87 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 5e-78 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-41 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-38 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-18 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 453 bits (1167), Expect = e-158
Identities = 222/406 (54%), Positives = 300/406 (73%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 81 LLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM 140
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 141 DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGS 200
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VS
Sbjct: 201 LIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVS 260
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+A
Sbjct: 261 LELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERA 320
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
K +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F
Sbjct: 321 KKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVF 380
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++
Sbjct: 381 SDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSAL 440
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V
Sbjct: 441 QSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 448 bits (1154), Expect = e-156
Identities = 220/414 (53%), Positives = 286/414 (69%), Gaps = 2/414 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ + ADLIE LA LE LD GK + + + D+ LRYYAG ADK HG+ + +
Sbjct: 81 LLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI 140
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT EP+GV G IIPWNFP M K+ PALA G +++K AEQTPL ALY A+
Sbjct: 141 DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVAN 200
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK V+
Sbjct: 201 LIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVT 260
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE IYDEF ++ V +A
Sbjct: 261 LELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARA 320
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 326
K+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG +GY+I+PT+F
Sbjct: 321 KSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVF 380
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S+++
Sbjct: 381 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 440
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV--TPIFNS 438
+AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V P NS
Sbjct: 441 QAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQKNS 494
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 381 bits (979), Expect = e-129
Identities = 165/422 (39%), Positives = 256/422 (60%), Gaps = 11/422 (2%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+ML+ A +I E + +A LE ++ GK + DI A + YYAG A + G+ +++
Sbjct: 85 VMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQHIQL 143
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ + A
Sbjct: 144 PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAE 203
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
+ AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +K V+
Sbjct: 204 IFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVT 261
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++V++
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYY 320
KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K GY+
Sbjct: 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYF 381
Query: 321 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
+ P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++ A+
Sbjct: 382 MSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAH 441
Query: 381 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI--FNS 438
V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+ + +S
Sbjct: 442 RVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDS 501
Query: 439 PW 440
+
Sbjct: 502 LF 503
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 339 bits (871), Expect = e-113
Identities = 143/408 (35%), Positives = 217/408 (53%), Gaps = 4/408 (0%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGK-LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 85
+LK AD+IEE+ +V A LE+ + GK LHS + A +
Sbjct: 66 CLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGE 125
Query: 86 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 145
R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL A
Sbjct: 126 YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLA 185
Query: 146 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 205
LAK P GV+N++ G G T G + H + VS TGS G ++ S++K
Sbjct: 186 ELAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT-ASSIKRT 243
Query: 206 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 265
+ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD +KL
Sbjct: 244 HMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAA 303
Query: 266 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKGYYIEPT 324
G P D + GP +R+ +E K G ++TGG+ GYY PT
Sbjct: 304 VATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPT 363
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ VS
Sbjct: 364 LLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSA 423
Query: 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V+
Sbjct: 424 RLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 285 bits (729), Expect = 8e-92
Identities = 130/415 (31%), Positives = 213/415 (51%), Gaps = 13/415 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD--KIHGEVL 84
++LK A L+ L + GK D+ A + + YYA AA + +
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 85 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 144
+ P+G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 160 VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKV 219
Query: 145 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----T 199
+ AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA
Sbjct: 220 FEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQ 279
Query: 200 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 259
+ K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G Y+
Sbjct: 280 TWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVL 339
Query: 260 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 319
++++++A+ VG P + GP V +Q ++LSYIE GK EG +L GGK + +GY
Sbjct: 340 ERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGY 397
Query: 320 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 379
+I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 398 FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL 457
Query: 380 NTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSV 431
R G ++ N A P+GG+K+SG G L+ L +L++K+V
Sbjct: 458 EWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 281 bits (720), Expect = 5e-91
Identities = 129/412 (31%), Positives = 195/412 (47%), Gaps = 13/412 (3%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGK-----LHSWAKMGDIPGAANTLRYYAGAADKIHG 81
+ K AD++ E + + + + K + + +I A G
Sbjct: 66 YLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGG 125
Query: 82 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
S+ REP+G+V I P+N+P + K++PAL AG + KP Q +
Sbjct: 126 SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 185
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L A AG+P GV N + G G G I H ++ ++FTGST +G ++ + A
Sbjct: 186 LLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--- 242
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
++P+ LELGGK ++ +D D+ A + G G+ C A RV V E + DE +K
Sbjct: 243 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
+ EK A +G+P D A P +D K D + I +GAT LT K ++G I
Sbjct: 303 IREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIK---REGNLI 358
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I T D A
Sbjct: 359 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418
Query: 382 VSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
++ + G + IN + P+ G K SG G S+ VKSVV
Sbjct: 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 270 bits (691), Expect = 4e-87
Identities = 106/412 (25%), Positives = 170/412 (41%), Gaps = 17/412 (4%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVLK 85
+ +I E+ + ++ A D GK + ++ L E +
Sbjct: 27 QLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVA 86
Query: 86 MSRALQG---YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 142
+R Q Y EP+GVV I WN+P + + A+AAG +I+KP+E + +A
Sbjct: 87 KTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMAD 146
Query: 143 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 202
A L + G D + +TGST VG+ VM AAA +L
Sbjct: 147 LLATLIP---QYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAA-KHL 202
Query: 203 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 262
PV+LELGGKSP + D D++ A G N G+ CVA + I ++ +KL
Sbjct: 203 TPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKL 262
Query: 263 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 322
+ K G+ + G ++ + F R+ I++ K YI
Sbjct: 263 KKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQS------SRYIA 315
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PTI +V + + EIFGPVM ++ +++EEAI+ N LA + + + V +
Sbjct: 316 PTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKM 375
Query: 383 SRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
+G + N P+GG SG G G +S + +S +
Sbjct: 376 IAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 249 bits (635), Expect = 5e-78
Identities = 120/413 (29%), Positives = 202/413 (48%), Gaps = 12/413 (2%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K AD+IE + +V A + ++AGK S A +G++ A + LR KI G+ +
Sbjct: 80 VLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPG 138
Query: 87 -----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 139 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 198
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
AG P + ++ G A +A + VSFTGST+VG +V++
Sbjct: 199 AMAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSFTGSTEVGERVVKVGG--- 254
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K +ELGG P ++ +D D++ AAD GI G+ C A V + +Y + ++
Sbjct: 255 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 314
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 321
+ ++ + VGDP DP V GP + D +++ IE +G +L GG+ +G
Sbjct: 315 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQP 374
Query: 322 EP-TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 380
+ +DM++ K E+F PV + ++ K +++AI+ AN YGL A + +D+
Sbjct: 375 TLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIR 434
Query: 381 TVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
R + G I+IN P+GG K SG R+ ++ K++V
Sbjct: 435 RAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 150 bits (378), Expect = 2e-41
Identities = 58/422 (13%), Positives = 115/422 (27%), Gaps = 59/422 (13%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----------MGDIPGAANTLRYYAGA 75
+ K A+ ++E + + +D K I G
Sbjct: 28 AIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGL 87
Query: 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 135
D + + R R + + I + + AL +G T++++
Sbjct: 88 KDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGS 147
Query: 136 QTPLIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVM 194
+ A + F T + + + + + G ++
Sbjct: 148 DALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLI 207
Query: 195 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 254
+ PV G + + + D+ A + + G A + ++ I
Sbjct: 208 SFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK-I 266
Query: 255 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314
EF +VE+ + V R+
Sbjct: 267 AKEFLPVIVEELRKHGVEVRGCEKTRE--------------------------------- 293
Query: 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 374
I P + +D E ++A+ K V+EAI+ G + I+T+
Sbjct: 294 ------IVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTE 344
Query: 375 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRD----CGLESLHNYLQVKS 430
+ + A I A +++N F +G G G L K
Sbjct: 345 NYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKF 404
Query: 431 VV 432
VV
Sbjct: 405 VV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 141 bits (356), Expect = 7e-38
Identities = 71/434 (16%), Positives = 127/434 (29%), Gaps = 40/434 (9%)
Query: 27 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ A +E ++ + L+ G+I AN LR +A + +
Sbjct: 53 LLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAIL 111
Query: 87 ---------SRALQGYTLREPIGVVGHIIPWNFPTT--MFFMKVSPALAAGCTMIVKPAE 135
+ +G V NFP + ALAAGC +IVK
Sbjct: 112 DTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHT 171
Query: 136 QTPLIALYFAHLAKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 191
P + A + A +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 172 AHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 231
Query: 192 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL---LGILFNKGEICVASSRV 248
+ A G + AD+A + G+ C V
Sbjct: 232 ALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 291
Query: 249 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308
+ + + + + + I+
Sbjct: 292 FALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS------ 345
Query: 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 368
+ + + EIFGP ++ + V + + + L
Sbjct: 346 ---QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLT 402
Query: 369 AGIMT--KDLNVANTVSRSIR--AGIIWINCY-------FAFDSDCPYGGYKMSGFGRDC 417
A I +D + + + AG + N + +A PY S
Sbjct: 403 ATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-V 461
Query: 418 GLESLHNYLQVKSV 431
G E++H +L+ +
Sbjct: 462 GAEAIHRWLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 84.1 bits (207), Expect = 3e-18
Identities = 50/399 (12%), Positives = 114/399 (28%), Gaps = 51/399 (12%)
Query: 27 IMLKFADLIEEHAEVLAVLEALD---AGKLHSWAKMGD---------IPGAANTLRYYAG 74
I+ K D ++ +A + +D A + + ++ A
Sbjct: 30 ILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAE 89
Query: 75 AADKIHGEVLKMSRALQGYTLRE-PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 133
D + G+V G TL + V ++ + + + ++ +G I+K
Sbjct: 90 LEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKG 148
Query: 134 AEQTPLIALYFAHLAK------LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 187
+++ A + + V +V + + + +
Sbjct: 149 GKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRG- 207
Query: 188 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 247
+++ + PV G + + +D D+ A ++L +
Sbjct: 208 --SNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETL 265
Query: 248 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 307
+ +E + V + + FD++ E GK A
Sbjct: 266 LIN-PKFSKWWEVLENLTLEGGV-------TIHATKDLKTAYFDKL---NELGKLTEA-- 312
Query: 308 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 367
T+ + +D E +A + E AI+ N
Sbjct: 313 ------------IQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSSRH 357
Query: 368 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
I+T++ A + + + ++ N F YG
Sbjct: 358 TDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.77 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.4e-93 Score=732.62 Aligned_cols=435 Identities=52% Similarity=0.902 Sum_probs=416.0
Q ss_pred CCCHHHHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT-----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 72 (441)
Q Consensus 4 ~~~~~~~~~a~~-----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 72 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.++++
T Consensus 47 ~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~ 126 (494)
T d1bxsa_ 47 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 126 (494)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHH
Confidence 567888887763 667899999999999999999999999999999999999976667899999999999
Q ss_pred HHhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 73 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+.+.++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|
T Consensus 127 a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~ag 206 (494)
T d1bxsa_ 127 AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 206 (494)
T ss_dssp HHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred hhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhC
Confidence 99998887777776677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++...++|+++|+||+||+||++|||++.|++.+++
T Consensus 207 lP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~ 286 (494)
T d1bxsa_ 207 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQ 286 (494)
T ss_dssp CCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHH
Confidence 99999999999888889999999999999999999999999998875578999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|++++++|||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++|+++|+++++||.
T Consensus 287 ~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~ 366 (494)
T d1bxsa_ 287 GVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 366 (494)
T ss_dssp HHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred HHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
...+.|+|++|||+.++++++.++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 367 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~ 446 (494)
T d1bxsa_ 367 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 446 (494)
T ss_dssp EECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred ccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEE
Confidence 87778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
||++....+.+||||+|.||+|+++|.+++++||+.|+|+++++++
T Consensus 447 iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~~~~ 492 (494)
T d1bxsa_ 447 VNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQK 492 (494)
T ss_dssp ESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred EcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEecCCC
Confidence 9998888889999999999999999999999999999999998753
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=4e-92 Score=724.21 Aligned_cols=434 Identities=50% Similarity=0.835 Sum_probs=414.3
Q ss_pred CCCHHHHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT-----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 72 (441)
Q Consensus 4 ~~~~~~~~~a~~-----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 72 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 47 ~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~ 126 (494)
T d1o04a_ 47 EGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126 (494)
T ss_dssp CBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHH
Confidence 467788887663 667899999999999999999999999999999999999986667999999999999
Q ss_pred HHhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 73 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
+.+..+..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+|.+++.++|
T Consensus 127 a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~ag 206 (494)
T d1o04a_ 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 206 (494)
T ss_dssp HHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhC
Confidence 99998877777766667778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++.+.+.++.|+.||+++.|.||||+.+|+.|++.++.+.++|+++|+||+||+||++|||++.|++.+++
T Consensus 207 lP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~ 286 (494)
T d1o04a_ 207 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHF 286 (494)
T ss_dssp CCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHH
T ss_pred cCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhh
Confidence 99999999999878899999999999999999999999999988765788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+++||.|++++++|||++++++|++.|.++++++++|+|.++++++||++++.+++++++++++++++|+++++||.
T Consensus 287 ~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 366 (494)
T d1o04a_ 287 ALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366 (494)
T ss_dssp HHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred hccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
...+.|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 367 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~ 446 (494)
T d1o04a_ 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 446 (494)
T ss_dssp BCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred cCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 88778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 437 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~ 437 (441)
||+++...+.+||||+|.||+|+++|.+++++||+.|+|++++.+
T Consensus 447 iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~p~ 491 (494)
T d1o04a_ 447 VNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQ 491 (494)
T ss_dssp ESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECSC
T ss_pred EcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeCCC
Confidence 999888888999999999999999999999999999999998764
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.2e-89 Score=706.27 Aligned_cols=430 Identities=39% Similarity=0.695 Sum_probs=410.5
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.+++.+|.++|+++++.|++++++|+++++.|+|||..+ +..|+..+++.+++++.+
T Consensus 54 ~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~e-a~~ev~~~~~~l~~~a~~ 132 (503)
T d1a4sa_ 54 PCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGL 132 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchh-hhhhhhhhhhcccccccc
Confidence 46788888887 456899999999999999999999999999999999999997 567999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.++..+.....+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++|+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~ 212 (503)
T d1a4sa_ 133 APTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPV 212 (503)
T ss_dssp GGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCT
T ss_pred cccccccccccCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCC
Confidence 88776665555567789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.++.|+.||++|.|.||||+++|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|
T Consensus 213 gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~ 290 (503)
T d1a4sa_ 213 GLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290 (503)
T ss_dssp TSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC
T ss_pred CeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchh
Confidence 99999999 6789999999999999999999999999999987 889999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.++||.|++++++|||++++++|+++|.+.++++++|+|.++.+++||++++.+++++++++++++.+|+++++||....
T Consensus 291 ~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~ 370 (503)
T d1a4sa_ 291 LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370 (503)
T ss_dssp GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCC
T ss_pred ccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ------CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 316 ------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 316 ------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++++|
T Consensus 371 ~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G 450 (503)
T d1a4sa_ 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAG 450 (503)
T ss_dssp CSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSS
T ss_pred CCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCee
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++++
T Consensus 451 ~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~ 497 (503)
T d1a4sa_ 451 TCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp EEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred EEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCC
Confidence 99999998888899999999999999999999999999999999985
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-88 Score=693.27 Aligned_cols=430 Identities=35% Similarity=0.595 Sum_probs=398.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..++...++..+...+++++..
T Consensus 35 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~ 114 (474)
T d1wnda_ 35 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 114 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccc
Confidence 567888888874 457899999999999999999999999999999999999976555677777777766665
Q ss_pred hhhhcCceec-cccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.........+ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++++++ +|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP 193 (474)
T d1wnda_ 115 ARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FP 193 (474)
T ss_dssp TTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SC
T ss_pred cccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CC
Confidence 5443332222 235677889999999999999999999999999999999999999999999999999999998775 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.++.|+.||+++.|.||||+++|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++
T Consensus 194 ~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~-~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~ 272 (474)
T d1wnda_ 194 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFG 272 (474)
T ss_dssp TTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHT
T ss_pred CCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh-cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhc
Confidence 99999999988889999999999999999999999999999987 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCe-EecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~-v~~gg~~ 313 (441)
|+++||.|++++++|||+++||+|+++|++.++++++|+|.++++.+||++++.+.+++.+++++++.+|+. ++.|+..
T Consensus 273 ~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~ 352 (474)
T d1wnda_ 273 YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK 352 (474)
T ss_dssp TGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB
T ss_pred ccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 6666676
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
..+.|+|+.|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+|
T Consensus 353 ~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~i 432 (474)
T d1wnda_ 353 RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432 (474)
T ss_dssp CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred cCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEE
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|+||+|+++|.+|+++||+.|+|++++
T Consensus 433 N~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 433 NTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp SCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred eCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 999888889999999999999999999999999999999875
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2e-86 Score=685.26 Aligned_cols=429 Identities=30% Similarity=0.515 Sum_probs=396.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..+ +..|+..+++.+++++..
T Consensus 70 ~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~ 148 (516)
T d1uzba_ 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-cchhHHHHHHHHHHHHHH
Confidence 467888888885 56899999999999999999999999999999999999997 577999999999999998
Q ss_pred hhhhcCceecc--ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+....+..... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~agl 228 (516)
T d1uzba_ 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGF 228 (516)
T ss_dssp HGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTC
T ss_pred HHhhhhcccccccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCc
Confidence 87665432221 2456678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
|+|++|++++.+.+.+..|+.||+++.|.||||..+|+.|.+.++. .+++|+++|+||+||+||++|||++.|++
T Consensus 229 P~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~ 308 (516)
T d1uzba_ 229 PPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308 (516)
T ss_dssp CTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHH
T ss_pred CcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHH
Confidence 9999999999888899999999999999999999999999998752 46789999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|.++||.|++++++|||++++++|++++.++++++++| |.++.+++||++++.+++++++++++++.+|+.+
T Consensus 309 ~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v- 386 (516)
T d1uzba_ 309 GVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV- 386 (516)
T ss_dssp HHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-
T ss_pred HHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-
Confidence 99999999999999999999999999999999999999999999 5678899999999999999999999999988655
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||...+..|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 387 ~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~ 466 (516)
T d1uzba_ 387 LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHV 466 (516)
T ss_dssp ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCE
Confidence 56666556899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCC--CCCCCCccCCCCCCCCCcch-HHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA--FDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~--~~~~~p~GG~~~SG~g~~~g-~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||++.+ ..+.+||||+|.||+|+++| .+++++||+.|+|+.+|
T Consensus 467 G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 467 GNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred eEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEcC
Confidence 9999999866 34789999999999998754 89999999999998764
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.3e-81 Score=645.44 Aligned_cols=430 Identities=30% Similarity=0.483 Sum_probs=392.3
Q ss_pred CCCHHHHHHHHH---------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT---------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~---------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+.++++.+++++.
T Consensus 48 ~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~-a~~Ev~~~i~~~~~~a~ 126 (499)
T d1ky8a_ 48 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAEL 126 (499)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHGGGG
T ss_pred CCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-Hhhhhhcccccccchhh
Confidence 467788887773 33578999999999999999999999999999999999996 57899999999999998
Q ss_pred hhhhhcCceecc-----ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 75 ~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
.+++..+..... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~ 206 (499)
T d1ky8a_ 127 DLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL 206 (499)
T ss_dssp GGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH
T ss_pred hhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccc
Confidence 887765543222 134567789999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|.++++++.+.+ +....|+.|++++.+.||||...++.+.+.++ .+|+++|+||+||+||++|||++.|++.
T Consensus 207 ~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~ 282 (499)
T d1ky8a_ 207 DAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADK 282 (499)
T ss_dssp HHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred cccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhh
Confidence 9999999999998854 56788999999999999999999999988754 5899999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|+++||.|++++++|||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++|+.+|+++++
T Consensus 283 i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~ 362 (499)
T d1ky8a_ 283 IARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 362 (499)
T ss_dssp HHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEe---eCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 310 GGKPIGKKGYYIEPTIFT---NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
||.... ..++.++++. ++.++|+++++|+||||++|++|+|.+||++++|+++|||++||||+|.++++++++++
T Consensus 363 ~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l 440 (499)
T d1ky8a_ 363 GGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLL 440 (499)
T ss_dssp CCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHC
T ss_pred eecccc--ccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 998753 3344444443 45678999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC-CCCC
Q 013526 387 RAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF-NSPW 440 (441)
Q Consensus 387 ~~g~v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~-~~~~ 440 (441)
++|+|+||++++. .+.+||||.|.||.|+++|.+++++||+.|+|++++. +.-|
T Consensus 441 ~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 441 EVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp CSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSC
T ss_pred CEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcCCCCCCC
Confidence 9999999998774 4789999999999999999999999999999999986 4445
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.7e-80 Score=625.94 Aligned_cols=410 Identities=26% Similarity=0.378 Sum_probs=370.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-eec---ccccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLK---MSRAL 90 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~---~~~~~ 90 (441)
.|+.++.++|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++........ ... ...+.
T Consensus 15 ~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (446)
T d1ad3a_ 15 SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQD 94 (446)
T ss_dssp TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTS
T ss_pred hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCc
Confidence 45788999999999999999999999999999999999999876679999999999888766554322 111 12345
Q ss_pred ccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 013526 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170 (441)
Q Consensus 91 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~ 170 (441)
..++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+. +|+++++++.+.+.. ..
T Consensus 95 ~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~ 172 (446)
T d1ad3a_ 95 DLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPE-TT 172 (446)
T ss_dssp EEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHH-HH
T ss_pred ceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchh-hh
Confidence 5688899999999999999999999999999999999999999999999999999999775 899999999885544 34
Q ss_pred HHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEE
Q 013526 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 250 (441)
Q Consensus 171 ~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V 250 (441)
.+ .++++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.|++++|.++||.|++++++||
T Consensus 173 ~~-~~~~~~~v~fTGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v 250 (446)
T d1ad3a_ 173 EL-LKERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILC 250 (446)
T ss_dssp HH-TTSCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEE
T ss_pred hh-cccccCceEEECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCcccc
Confidence 44 4667999999999999999999988 889999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCC
Q 013526 251 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 330 (441)
Q Consensus 251 ~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 330 (441)
|++++++|+++|.+.++.+ +|+|.++++++||++++.+.+++.++++++ +...|+... ..+.|+.|||+.+++
T Consensus 251 ~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~~-~~~~~~~Ptil~~v~ 323 (446)
T d1ad3a_ 251 DPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTWD-QSSRYIAPTILVDVD 323 (446)
T ss_dssp CGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCEE-TTTTEECCEEECSCC
T ss_pred ccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceeec-CCCCCcCCEEEECCC
Confidence 9999999999999999887 899999999999999999999998877553 444444433 478899999999999
Q ss_pred CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCC--CCCCCCccCC
Q 013526 331 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGY 408 (441)
Q Consensus 331 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~p~GG~ 408 (441)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+
T Consensus 324 ~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~ 403 (446)
T d1ad3a_ 324 PQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGV 403 (446)
T ss_dssp TTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCC
T ss_pred CCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999765 5578999999
Q ss_pred CCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 409 KMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 409 ~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.||+|+++|.+++++||+.|+|+++.
T Consensus 404 k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 404 GNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp GGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred ccceeccchHHHHHHHHhceeEEEEcc
Confidence 999999999999999999999999864
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=7.4e-78 Score=616.87 Aligned_cols=424 Identities=32% Similarity=0.490 Sum_probs=390.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|.+++++|++++++|+|||..+ +..|+...+..++++...
T Consensus 35 ~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~-a~~e~~~~~~~~~~~~~~ 113 (474)
T d1euha_ 35 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKS-AVSEVVRTAEIINYAAEE 113 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcch-hccccchhHHHHHHHHHH
Confidence 467888888884 45789999999999999999999999999999999999996 677999999999988876
Q ss_pred hhhhcCceec------cccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~------~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
.......... ...+...+.+++|+|||++|+|||||+...+..+++||++||+||+|||+.+|.++.++.+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~ 193 (474)
T d1euha_ 114 GLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA 193 (474)
T ss_dssp HTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH
T ss_pred HhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHH
Confidence 6543222111 1234556788999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++++.++++.|+.||+++.|.||||..+++.+.+.++ .+|+++|+||+||+||++|||++.|++.
T Consensus 194 eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~ 270 (474)
T d1euha_ 194 EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKN 270 (474)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred HhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc---cceEEEecCCcceEEEECCCchhhHHHH
Confidence 9999999999999987889999999999999999999999999998753 6899999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|+++||.|+++++||||++++++|++.++++...++.|++.+. ..++|++.....+++.+.+......+...+.
T Consensus 271 i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (474)
T d1euha_ 271 IIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALT 349 (474)
T ss_dssp HHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECS
T ss_pred HHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccc
Confidence 999999999999999999999999999999999999999999998865 4688999999999999999999999988876
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
++.. .|+|++|||+..++++|++++||+||||++|++|+|+||||+++|++++||+++|||+|.++++++++++++|
T Consensus 350 ~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g 426 (474)
T d1euha_ 350 EIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 426 (474)
T ss_dssp CCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSS
T ss_pred cCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEE
Confidence 6553 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||++.. ..+.+||||.|+||+|+++|++++++||+.|+|+++.
T Consensus 427 ~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 427 TVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473 (474)
T ss_dssp EEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEec
Confidence 999999865 4578999999999999999999999999999999874
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.8e-70 Score=563.53 Aligned_cols=411 Identities=20% Similarity=0.263 Sum_probs=344.0
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++|+++|++++++|+|||..+ +..|+..+++.++++++.
T Consensus 22 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~-a~~Ev~~~~~~~~~~a~~ 100 (504)
T d1ez0a_ 22 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADV 100 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 467788888875 55789999999999999999999999999999999999997 567999999999999988
Q ss_pred hhhhcCceec------c---ccccccceeecccceEEEECCCccchHhh--HHHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 76 ADKIHGEVLK------M---SRALQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 76 ~~~~~~~~~~------~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
+++....... . ..+...+..++|+|||++|+|||||+... ..++++||++||+||+|||+.+|.++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~ 180 (504)
T d1ez0a_ 101 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180 (504)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhh
Confidence 7664332111 0 12345677888999999999999999654 45899999999999999999999888766
Q ss_pred H----HHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCce--eeecCCCCceeec
Q 013526 145 A----HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV--SLELGGKSPLLIF 218 (441)
Q Consensus 145 ~----~~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~--~~e~gg~~~~iV~ 218 (441)
. +++.++|+|+|++|++++.+.+.++.|++||+++.|.||||+.+++.|.+.++ ..++|+ ++|+||+||+||+
T Consensus 181 ~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa-~~~~~~~l~~ElGGknp~iV~ 259 (504)
T d1ez0a_ 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIF 259 (504)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEEC
T ss_pred hhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh-ccccccccccccccccccccc
Confidence 4 55667899999999999988889999999999999999999999999999988 666664 5599999999999
Q ss_pred CCCCHHHHH--HHHHHHHhhccCCCcccCceEEEeCccH-HHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHH
Q 013526 219 DDVDVNTAA--DMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295 (441)
Q Consensus 219 ~dad~~~aa--~~i~~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 295 (441)
+|||++.|+ +.++.++|.|+||.|++++++||+++.+ +.|++.+++.++.. ++++.+||+++..+.+++
T Consensus 260 ~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~~~~~gp~i~~~~~~~v-- 331 (504)
T d1ez0a_ 260 PSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SPSTLLTPGIRDSYQSQV-- 331 (504)
T ss_dssp HHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CCBCCSSHHHHHHHHHHH--
T ss_pred ccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------ccccccccchhhhhhhhh--
Confidence 999999875 4799999999999999999999988864 46777776665542 457889999988877665
Q ss_pred HHHHHHHcCCeEecCCCcCCCCCceeecEEEee---CCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013526 296 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN---VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 372 (441)
Q Consensus 296 ~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~---~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 372 (441)
++.+..+|+.+..|+.. +.+..|+++.. +..++++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus 332 -i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~ 406 (504)
T d1ez0a_ 332 -VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIH 406 (504)
T ss_dssp -HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEE
T ss_pred -hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEE
Confidence 56677788888888763 44555555543 33568899999999999999999999999999999999999999
Q ss_pred cC--CHHHHHHHHHhcc--ceEEEEcCcCCC-------CCCCCccCCCCCCCCCcchHHHHHhhhhccE
Q 013526 373 TK--DLNVANTVSRSIR--AGIIWINCYFAF-------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430 (441)
Q Consensus 373 s~--d~~~~~~~~~~l~--~g~v~vN~~~~~-------~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~ 430 (441)
|+ |..++.+++++++ +|+|+||++++. ..+.||||.+.||.| ..|.+++++|+++.+
T Consensus 407 t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~ 474 (504)
T d1ez0a_ 407 ATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA 474 (504)
T ss_dssp CCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred ecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence 96 4458899999986 899999997651 124588888888855 458999999987644
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.3e-59 Score=468.91 Aligned_cols=374 Identities=16% Similarity=0.136 Sum_probs=295.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhcc------------HHHHHHHHHHHHHhhhhhcCc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD------------IPGAANTLRYYAGAADKIHGE 82 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e------------v~~~~~~l~~~~~~~~~~~~~ 82 (441)
.|+.+++.+|.++|+++++.|++|+++|++++++|+||+..+ ...| +..+++.+++++.......+.
T Consensus 16 ~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~-~~~e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (414)
T d1o20a_ 16 VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARER-GVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEV 94 (414)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-TCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCE
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhc-cccHHHHHHHhccHHHHHHHHHHHHHHHHhhhhcccc
Confidence 578999999999999999999999999999999999999885 3444 556677777777765555444
Q ss_pred eeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----CCCCCcE
Q 013526 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVL 158 (441)
Q Consensus 83 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a----glP~~~v 158 (441)
..+..........++|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~ 174 (414)
T d1o20a_ 95 IDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSV 174 (414)
T ss_dssp EEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGE
T ss_pred ccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhcccccccc
Confidence 444334456778889999999999999999999999999999999999999999999999999998776 5555567
Q ss_pred EEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCC-CceeecCCCCHHHHHHHHHHHHhhc
Q 013526 159 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK-SPLLIFDDVDVNTAADMALLGILFN 237 (441)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~-~~~iV~~dad~~~aa~~i~~~~~~~ 237 (441)
+.+.+.+.+....+..++.+. |+|+...+..+.+.++ ...+++++|+||+ +++||++|||++.|++.++.++|.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~a~-~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~ 250 (414)
T d1o20a_ 175 EFIENTDRSLVLEMIRLREYL---SLVIPRGGYGLISFVR-DNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR 250 (414)
T ss_dssp EECCCCCTHHHHHHTTCTTTC---SEEEECSCHHHHHHHH-HHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC
T ss_pred ccccccchhhhhhcccccccC---eEEEcccHHHHHHHhh-hccccceecccCCCCCeecccccchhhhhhHHHhhhhcC
Confidence 777665555566665544433 3333333444555555 4456666666665 5678889999999999999998866
Q ss_pred cCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCC
Q 013526 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 317 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 317 (441)
||.|+++++++||+++|++|+++|.+...+..++.+.++. .. .
T Consensus 251 -gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~----------~~----~---------------------- 293 (414)
T d1o20a_ 251 -PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK----------TR----E---------------------- 293 (414)
T ss_dssp -TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHH----------HH----H----------------------
T ss_pred -CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchh----------hh----h----------------------
Confidence 9999999999999999999999999999887655433211 10 0
Q ss_pred CceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcC
Q 013526 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397 (441)
Q Consensus 318 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~ 397 (441)
+.+.+. ......+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+++
T Consensus 294 ---~~~~~~---~~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~ 367 (414)
T d1o20a_ 294 ---IVPDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNAST 367 (414)
T ss_dssp ---HSTTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCG
T ss_pred ---hcccce---ecccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCC
Confidence 001111 11234568999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhccEEEEeCC
Q 013526 398 AFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 398 ~~~~~~p~GG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~~~ 436 (441)
.+....|||+.|++|+| +. +|++|+++||+.|+|+++..
T Consensus 368 ~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 368 RFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp GGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred cCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 76556677776677653 32 38999999999999987643
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.9e-50 Score=401.07 Aligned_cols=386 Identities=17% Similarity=0.152 Sum_probs=270.9
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCChhhhhh-----cc-HHHHHHHHHHHHHhhhhhcCc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWAKM-----GD-IPGAANTLRYYAGAADKIHGE 82 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~~~~-----~e-v~~~~~~l~~~~~~~~~~~~~ 82 (441)
.|+.++.++|.++|+++++.|++|+++|+++. +++.|++.....+ .+ +...++.++..+...+.. +.
T Consensus 18 ~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~dpv-g~ 96 (436)
T d1vlua_ 18 ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPV-GK 96 (436)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSS-SC
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHHHHHHHhccccc-ee
Confidence 56689999999999999999999999998853 4456665432110 11 455555566555543322 22
Q ss_pred ee---ccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH--------HHc
Q 013526 83 VL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA--------KLA 151 (441)
Q Consensus 83 ~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l--------~~a 151 (441)
.. ..+.+...+.++.|+||+++| |+++| ..++...+.||++||+||+||++.++.++..+.+++ .++
T Consensus 97 ~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~a 174 (436)
T d1vlua_ 97 VKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSET 174 (436)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhcccc
Confidence 21 123567788899999999988 55667 666778899999999999999999999988876665 467
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+++++++++ ..+..+.|..|+++|.|+||||...++.+.+. ...|++.+++|++|+||++|||++.|++.++
T Consensus 175 GlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~ 249 (436)
T d1vlua_ 175 GVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIYLDEDADLIKAKRISL 249 (436)
T ss_dssp CCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEEECTTCCHHHHHHHHH
T ss_pred CCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccceeecccccHHHHHHHHH
Confidence 999999999987 45678899999999999999999988877554 3469999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
.++|.+.|| |.+.++++||+++++.|...+....+. |. .+. .++. +.....+..... +
T Consensus 250 ~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~----~~~~~~~~~~~~------~ 307 (436)
T d1vlua_ 250 DAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKD----LKTAYFDKLNEL------G 307 (436)
T ss_dssp HTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHH----HHHHHHHHHHHH------T
T ss_pred HHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHH----HHHHhhhhhhhc------c
Confidence 999999996 889999999999998886555444333 11 110 1222 222222221111 1
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
. ..+....|++....+ ..+.+|.|+|+++|++|+|+||||+++|..++||+++|||+|.+.+++|++++++|.|
T Consensus 308 ~---~~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V 381 (436)
T d1vlua_ 308 K---LTEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGV 381 (436)
T ss_dssp C---CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEE
T ss_pred c---ccccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEE
Confidence 1 122333344432222 2368999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCC----CCCcchHHHHHhhhhccEEEEeCC
Q 013526 392 WINCYFAFDSDCPYGGYKMSG----FGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG----~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+||.++.+.++.+||.-.+-| ..+.+|+.|++.+|..|++....+
T Consensus 382 ~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 382 YWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp EESSCGGGCC----------------------CCSGGGEEEEEEEECSS
T ss_pred EEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 999999887777776322223 345789999999999999887654
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.77 E-value=0.017 Score=54.43 Aligned_cols=340 Identities=16% Similarity=0.151 Sum_probs=191.9
Q ss_pred CCHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh-hh--hhhccHHHHHH--------HHHHH
Q 013526 5 PSRQHVRRLITVHGHV-FLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SW--AKMGDIPGAAN--------TLRYY 72 (441)
Q Consensus 5 ~~~~~~~~a~~~~~~~-~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~--~~~~ev~~~~~--------~l~~~ 72 (441)
.+.++.++++.....+ .++-.+....+.+.++.+-|+=+...++..-+-. .. ....|+..+.+ .|+..
T Consensus 9 l~~~e~~~ll~R~~~~~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A 88 (431)
T d1k75a_ 9 CTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVA 88 (431)
T ss_dssp SCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHH
Confidence 4555666665554333 3444566777788888887776666666553211 10 11224443322 22222
Q ss_pred HHhhhhhc------CceeccccccccceeecccceEEEECCCc---cchHhhHHHHHHHHhhCCeEE--EeCCCcchHHH
Q 013526 73 AGAADKIH------GEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIA 141 (441)
Q Consensus 73 ~~~~~~~~------~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~AL~aGn~vv--~kps~~~~~~~ 141 (441)
....+..+ ........|......+.|+--|.++.|.- ||-..+ ...+||-.+|..=| ..|+...|.
T Consensus 89 ~~rI~~FH~~Q~~~~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvL-M~aiPAkvAGV~~Ivv~tPp~~~~~-- 165 (431)
T d1k75a_ 89 VKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPPPIADE-- 165 (431)
T ss_dssp HHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHH-HHHHHHHHHTCSEEEEEECSSCCHH--
T ss_pred HHHHHHHHHhhcCCCceeeccCCceeeeeeeehhhheeeccCCCccchHHHH-HHHHHHHhcCCCceeEEeCCCCcch--
Confidence 22222221 11222335777888899999999999954 444333 45899999998754 455544442
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCc--e
Q 013526 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--L 215 (441)
Q Consensus 142 ~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~--~ 215 (441)
+.-+...+|.. .+..-.|.....+|.- -|.||.|+=.|+.-+...=+...+ ....--+=-..|.+= +
T Consensus 166 --~l~aa~~~Gv~----~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~~vgID~~aGPSEv~v 238 (431)
T d1k75a_ 166 --ILYAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLV 238 (431)
T ss_dssp --HHHHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STTSCEESCCCCCCEEEE
T ss_pred --HHHHHHHcCcc----ceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCCccccccccCCceEEE
Confidence 23334455654 4444446555555554 678999999999876553333322 111111212234443 3
Q ss_pred eecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCcc--HHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHH
Q 013526 216 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI--YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293 (441)
Q Consensus 216 iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~--~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 293 (441)
|-++++|.+.+|..++.-+=+... .+.++|..+- .+++.+.+.++++.+ |. .
T Consensus 239 iAD~~a~p~~iAaDllaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l----~r-----------~------ 292 (431)
T d1k75a_ 239 IADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL----PR-----------A------ 292 (431)
T ss_dssp EECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTC----SS-----------C------
T ss_pred EecCCCCHHHHHHHHHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhc----hH-----------H------
Confidence 335678999999998876644443 4566776662 344555555544432 11 0
Q ss_pred HHHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013526 294 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 373 (441)
Q Consensus 294 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s 373 (441)
+.++... +..+ ++.++|++|+++++|..- .-...|.+
T Consensus 293 -~i~~~s~-------------------------------------~~~~----ii~v~~~~ea~~~~N~~A-PEHL~l~~ 329 (431)
T d1k75a_ 293 -ETARQAL-------------------------------------NASR----LIVTKDLAQCVEISNQYG-PEHLIIQT 329 (431)
T ss_dssp -HHHHHHH-------------------------------------TTCE----EEECSSHHHHHHHHHHHC-CSEEEEES
T ss_pred -HHHHhhh-------------------------------------ccce----EEEecCHHHHHHHHHhhh-HHHHHHHh
Confidence 0011111 1111 345799999999999842 23577888
Q ss_pred CCHHHHHHHHHhc-cceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 374 KDLNVANTVSRSI-RAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 374 ~d~~~~~~~~~~l-~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
+|+ .++...+ ++|.|++..+.. .+..+|.|| .+++.+.-+...|+.+.++
T Consensus 330 ~~~---~~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 330 RNA---RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 389 (431)
T ss_dssp TTH---HHHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred cCH---HHHHhhhhhcchhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeE
Confidence 887 3566666 599999988754 335567665 4444444466677776544
|